F412876

General Info

Members Datasets Scaffolds Average Seq Length
336 196 673 506

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2738543023|2739302942
Length 576
Sequence VKYDFRRNIYEAIYRIIYDFLFVQSLKINYAVQKLLFLSITKKEKTLFEELFLHYTDIMMQETKILWADDEINLLKPHILLLNEKGYHVTTYTNGNDALEAFGKEHFDLVFLDENMPGMSGLETLSAIKNIRNDVPVVLITKSEEENLMEDAIGSKIDDYLIKPVNPKQVLLTIKKLIDNKRLVSEKTSMAYQQDFRRLGMTLNDKLSYEEWVEVYKKLVFWELELEKLDDPQMHEILTMQKSEANTQFSKFIEDHYLGWVNGKGTAPLLSNELLKKKVFPLINDTTPVFFILIDNLRYDQWRIINPLITEYFRMDDEDIYTSILPTATQYARNAIFSGLMPLEMEKRFPGLWQNDDDEGGKNMHEAAFLADQIKRSLRKECKFSYNKILTYDDGRALNEQVNNLLQNDFNAIVYNFVDMLSHARTDMQMIRELANDDAAYRSLTLSWFEHSPLMDLLKKISQKRVKLVITTDHGTIRVKHPSKVIGDRNTNTNLRYKQGRNLNYNAKEVFLIKNPHEAQLPKINISSNYIFAKEDRYFVYQNNYNQFVNYYNETFQHGGISLEEMIIPIATYSSR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
57 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
58 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
59 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
60 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
64 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
65 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
95 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
96 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
97 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
98 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
99 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
100 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
101 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
102 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
103 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
121 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
122 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
123 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
124 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
130 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
131 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
132 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
159 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
160 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
161 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
162 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
163 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
164 2738543023 Pedobacter sp. OK628 Isolate Unclassified
165 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
166 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
167 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
168 2738541283 Pedobacter sp. OK701 Isolate Unclassified
169 2738541284 Pedobacter sp. YR016 Isolate Unclassified
170 2738541302 Pedobacter sp. CF074 Isolate Unclassified
171 2739367651 Pedobacter sp. OK291 Isolate Unclassified
172 2739367656 Pedobacter sp. CF523 Isolate Unclassified
173 2739367663 Pedobacter sp. YR510 Isolate Unclassified
174 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
175 2818991437 Pedobacter terrae 518 Isolate Unclassified
176 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
177 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
178 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
179 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
180 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
181 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
182 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
183 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
184 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
185 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
186 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
187 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
188 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
189 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
190 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
191 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
192 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
193 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
194 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
195 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
196 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.88
Metatranscriptomes 0.3
Isolates 9.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.33
Nodule 0
Rhizoplane 0.6
Rhizosphere 80.36
Stem 0
Stem Tuber 0
Unclassified 1.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2814806 2162886007 Bacteria 7791
2 JGI24740J21852_10005623 3300001979 Bacteria 5278
3 JGI25162J39368_1000097 3300002737 Bacteria 96520
4 JGI25164J39214_1001588 3300002772 Bacteria 4830
5 JGI25152J39213_1000044 3300002773 Bacteria 87213
6 JGI25150J39212_1000006 3300002774 Bacteria 257228
7 JGI25151J46595_10000024 3300003187 Bacteria 217596
8 JGI25165J46597_1001806 3300003214 Bacteria 9076
9 JGI25153J46596_10000026 3300003215 Bacteria 217245
10 rootH2_10001273 3300003320 Bacteria 179792
11 rootH1_10000975 3300003316 Bacteria 12698
12 rootH1_10000975 3300003323 Bacteria 22074
13 Ga0055536_1000002 3300003781 Bacteria 605605
14 Ga0055530_10004763 3300003791 Bacteria 6823
15 Ga0065714_10002336 3300005288 Bacteria 23974
16 Ga0065714_10002820 3300005288 Bacteria 14605
17 Ga0065714_10003226 3300005288 Bacteria 12001
18 Ga0065714_10064557 3300005288 Bacteria 36424
19 Ga0065714_10069253 3300005288 Bacteria 4306
20 Ga0065704_10000218 3300005289 Bacteria 76484
21 Ga0065704_10081285 3300005289 Bacteria 3715
22 Ga0070658_10000675 3300005327 Bacteria 29517
23 Ga0070676_10000573 3300005328 Bacteria 17839
24 Ga0070683_100052566 3300005329 Bacteria 3775
25 Ga0070680_100019137 3300005336 Bacteria 5422
26 Ga0070660_100055224 3300005339 Bacteria 3069
27 Ga0070673_100078444 3300005364 Bacteria 2672
28 Ga0070659_100000076 3300005366 Bacteria 77320
29 Ga0070663_100008751 3300005455 Bacteria 6241
30 Ga0070678_100006070 3300005456 Bacteria 7048
31 Ga0070662_100002625 3300005457 Bacteria 11085
32 Ga0068867_100001804 3300005459 Bacteria 14902
33 Ga0070684_100057472 3300005535 Bacteria 3397
34 Ga0070672_100087863 3300005543 Bacteria 2502
35 Ga0070665_100000017 3300005548 Bacteria 448013
36 Ga0068855_100000021 3300005563 Bacteria 195708
37 Ga0068855_100001368 3300005563 Bacteria 30198
38 Ga0068855_100066298 3300005563 Bacteria 4209
39 Ga0068855_100074101 3300005563 Bacteria 3954
40 Ga0068857_100008631 3300005577 Bacteria 8820
41 Ga0068856_100000006 3300005614 Bacteria 223827
42 Ga0068856_100007924 3300005614 Bacteria 10377
43 Ga0068856_100072663 3300005614 Bacteria 3405
44 Ga0068852_100005157 3300005616 Bacteria 9313
45 Ga0070716_100027048 3300006173 Bacteria 3077
46 Ga0075366_10000496 3300006195 Bacteria 18213
47 Ga0097621_100002454 3300006237 Bacteria 12699
48 Ga0068871_100003252 3300006358 Bacteria 11143
49 Ga0068865_100000070 3300006881 Bacteria 53670
50 Ga0105244_10008729 3300009036 Bacteria 6304
51 Ga0105240_10000083 3300009093 Bacteria 192934
52 Ga0105240_10002855 3300009093 Bacteria 27308
53 Ga0105240_10008396 3300009093 Bacteria 14776
54 Ga0105240_10052542 3300009093 Bacteria 5121
55 Ga0105241_10002484 3300009174 Bacteria 13855
56 Ga0105241_10012206 3300009174 Bacteria 6304
57 Ga0105241_10024488 3300009174 Bacteria 4482
58 Ga0105237_10000138 3300009545 Bacteria 102411
59 Ga0105237_10000311 3300009545 Bacteria 67880
60 Ga0105237_10002154 3300009545 Bacteria 24772
61 Ga0105237_10008458 3300009545 Bacteria 11136
62 Ga0105237_10016924 3300009545 Bacteria 7564
63 Ga0105237_10017810 3300009545 Bacteria 7365
64 Ga0105237_10058718 3300009545 Bacteria 3850
65 Ga0105237_10074118 3300009545 Bacteria 3395
66 Ga0105238_10013683 3300009551 Bacteria 8194
67 Ga0105239_10000130 3300010375 Bacteria 105894
68 Ga0105239_10004003 3300010375 Bacteria 17850
69 Ga0105239_10006318 3300010375 Bacteria 13785
70 Ga0105239_10008634 3300010375 Bacteria 11549
71 Ga0105239_10010625 3300010375 Bacteria 10298
72 Ga0105239_10067803 3300010375 Bacteria 3920
73 Ga0105246_10047403 3300011119 Bacteria 2934
74 Ga0157373_10000057 3300013100 Bacteria 99697
75 Ga0157373_10000167 3300013100 Bacteria 53611
76 Ga0157373_10003284 3300013100 Bacteria 12212
77 Ga0157373_10016236 3300013100 Bacteria 5433
78 Ga0157371_10000286 3300013102 Bacteria 68502
79 Ga0157371_10000480 3300013102 Bacteria 48687
80 Ga0157371_10001194 3300013102 Bacteria 27809
81 Ga0157371_10003446 3300013102 Bacteria 14345
82 Ga0157371_10014257 3300013102 Bacteria 6009
83 Ga0157371_10021038 3300013102 Bacteria 4796
84 Ga0157371_10033359 3300013102 Bacteria 3699
85 Ga0157370_10000681 3300013104 Bacteria 42275
86 Ga0157370_10002658 3300013104 Bacteria 21448
87 Ga0157370_10005904 3300013104 Bacteria 13649
88 Ga0157370_10011041 3300013104 Bacteria 9471
89 Ga0157370_10032935 3300013104 Bacteria 5055
90 Ga0157370_10041280 3300013104 Bacteria 4452
91 Ga0157370_10123449 3300013104 Bacteria 2418
92 Ga0157370_10128563 3300013104 Bacteria 2364
93 Ga0157370_10209726 3300013104 Bacteria 1806
94 Ga0157369_10000152 3300013105 Bacteria 98031
95 Ga0157369_10000301 3300013105 Bacteria 66010
96 Ga0157374_10002863 3300013296 Bacteria 14485
97 Ga0157374_10003120 3300013296 Bacteria 13919
98 Ga0157374_10008123 3300013296 Bacteria 8969
99 Ga0157378_10009763 3300013297 Bacteria 8366
100 Ga0157378_10058050 3300013297 Bacteria 3451
101 Ga0163162_10000011 3300013306 Bacteria 299877
102 Ga0163162_10000026 3300013306 Bacteria 178701
103 Ga0163162_10001297 3300013306 Bacteria 23363
104 Ga0157372_10000037 3300013307 Bacteria 172444
105 Ga0157372_10000158 3300013307 Bacteria 73709
106 Ga0157372_10001857 3300013307 Bacteria 22903
107 Ga0157372_10052052 3300013307 Bacteria 4558
108 Ga0157372_10056349 3300013307 Bacteria 4391
109 Ga0157372_10240882 3300013307 Bacteria 2099
110 Ga0157375_10003442 3300013308 Bacteria 13716
111 Ga0157375_10034707 3300013308 Bacteria 4808
112 Ga0157375_10074870 3300013308 Bacteria 3408
113 Ga0157380_10000243 3300014326 Bacteria 32734
114 Ga0182008_10000025 3300014497 Bacteria 191222
115 Ga0182008_10000058 3300014497 Bacteria 100175
116 Ga0182008_10000059 3300014497 Bacteria 100173
117 Ga0182006_1000156 3300015261 Bacteria 72868
118 Ga0182006_1000470 3300015261 Bacteria 31499
119 Ga0182006_1000482 3300015261 Bacteria 31213
120 Ga0182006_1001296 3300015261 Bacteria 15423
121 Ga0182006_1027602 3300015261 Bacteria 2315
122 Ga0182007_10000008 3300015262 Bacteria 332953
123 Ga0182007_10021723 3300015262 Bacteria 2275
124 Ga0183373_1002 3300015682 Bacteria 990153
125 Ga0163161_10000305 3300017792 Bacteria 42845
126 Ga0163161_10000502 3300017792 Bacteria 31881
127 Ga0163161_10000778 3300017792 Bacteria 25045
128 Ga0163161_10010747 3300017792 Bacteria 6342
129 Ga0207427_100083 3300025231 Bacteria 142745
130 Ga0209437_100021 3300025233 Bacteria 646400
131 Ga0209437_100030 3300025233 Bacteria 532466
132 Ga0207425_1000003 3300025245 Bacteria 1145342
133 Ga0209026_1001818 3300025250 Bacteria 8781
134 Ga0209026_1002354 3300025250 Bacteria 7154
135 Ga0209129_1000022 3300025258 Bacteria 440876
136 Ga0209233_1000035 3300025261 Bacteria 568478
137 Ga0209455_1000911 3300025272 Bacteria 15402
138 Ga0209676_1000022 3300025292 Bacteria 605659
139 Ga0209025_1000007 3300025294 Bacteria 1145109
140 Ga0209758_1000012 3300025297 Bacteria 949866
141 Ga0209050_1000020 3300025298 Bacteria 605671
142 Ga0207647_10002483 3300025904 Bacteria 13965
143 Ga0207645_10002024 3300025907 Bacteria 16278
144 Ga0207705_10000035 3300025909 Bacteria 201649
145 Ga0207654_10005125 3300025911 Bacteria 6612
146 Ga0207654_10006104 3300025911 Bacteria 6056
147 Ga0207695_10000127 3300025913 Bacteria 227338
148 Ga0207695_10002500 3300025913 Bacteria 27026
149 Ga0207695_10006085 3300025913 Bacteria 15745
150 Ga0207671_10001040 3300025914 Bacteria 33728
151 Ga0207671_10003867 3300025914 Bacteria 14644
152 Ga0207671_10004476 3300025914 Bacteria 13330
153 Ga0207671_10004973 3300025914 Bacteria 12455
154 Ga0207671_10010870 3300025914 Bacteria 7467
155 Ga0207671_10025888 3300025914 Bacteria 4402
156 Ga0207671_10035390 3300025914 Bacteria 3706
157 Ga0207660_10021285 3300025917 Bacteria 4360
158 Ga0207657_10045199 3300025919 Bacteria 3867
159 Ga0207657_10066004 3300025919 Bacteria 3082
160 Ga0207694_10037432 3300025924 Bacteria 3727
161 Ga0207694_10114064 3300025924 Bacteria 2152
162 Ga0207644_10032556 3300025931 Bacteria 3638
163 Ga0207690_10000049 3300025932 Bacteria 113589
164 Ga0207706_10007385 3300025933 Bacteria 10160
165 Ga0207709_10000026 3300025935 Bacteria 354467
166 Ga0207704_10008834 3300025938 Bacteria 4837
167 Ga0207665_10040895 3300025939 Bacteria 3094
168 Ga0207667_10000014 3300025949 Bacteria 421261
169 Ga0207667_10039803 3300025949 Bacteria 5006
170 Ga0207667_10061379 3300025949 Bacteria 3932
171 Ga0207667_10134499 3300025949 Bacteria 2546
172 Ga0207702_10000023 3300026078 Bacteria 189234
173 Ga0207702_10025706 3300026078 Bacteria 4888
174 Ga0207648_10004191 3300026089 Bacteria 14900
175 Ga0207674_10199210 3300026116 Bacteria 1952
176 Ga0207683_10008462 3300026121 Bacteria 8806
177 Ga0268266_10000037 3300028379 Bacteria 342368
178 Ga0265334_10032629 3300028573 Bacteria 2076
179 Ga0265336_10009663 3300028666 Bacteria 3328
180 Ga0307517_10001130 3300028786 Bacteria 45094
181 Ga0307515_10000077 3300028794 Bacteria 228162
182 Ga0307515_10012976 3300028794 Bacteria 15612
183 Ga0307515_10013172 3300028794 Bacteria 15471
184 Ga0307515_10026002 3300028794 Bacteria 10099
185 Ga0265338_10057297 3300028800 Bacteria 3448
186 Ga0316176_1132212 3300030732 Bacteria 4964
187 Ga0316181_1251786 3300030744 Bacteria 2564
188 Ga0307509_10036898 3300031507 Bacteria 5347
189 Ga0307408_100000209 3300031548 Bacteria 62437
190 Ga0307408_100000393 3300031548 Bacteria 39808
191 Ga0307408_100001007 3300031548 Bacteria 21740
192 Ga0316576_10055729 3300031727 Bacteria 2886
193 Ga0316576_10126609 3300031727 Bacteria 1920
194 Ga0316578_10003857 3300031728 Bacteria 6958
195 Ga0316578_10010443 3300031728 Unclassified 4818
196 Ga0307405_10000017 3300031731 Bacteria 195149
197 Ga0307405_10005295 3300031731 Bacteria 6204
198 Ga0316577_10038728 3300031733 Bacteria 2667
199 Ga0307407_10000002 3300031903 Bacteria 323084
200 Ga0307412_10000001 3300031911 Bacteria 822691
201 Ga0307412_10004779 3300031911 Bacteria 7561
202 Ga0307412_10015874 3300031911 Bacteria 4473
203 Ga0307416_100000005 3300032002 Bacteria 477728
204 Ga0307414_10001057 3300032004 Bacteria 14090
205 Ga0307414_10027018 3300032004 Bacteria 3702
206 Ga0307411_10005626 3300032005 Bacteria 6179
207 Ga0307507_10000143 3300033179 Bacteria 124248
208 Ga0307510_10003117 3300033180 Bacteria 19187
209 Ga0316588_1008500 3300033528 Bacteria 2115
210 Ga0316584_0013883 3300036712 Bacteria 5715
211 Ga0316584_0034344 3300036712 Unclassified 3760
212 Ga0395899_0000017 3300037312 Bacteria 440179
213 Ga0395899_0000280 3300037312 Bacteria 66580
214 Ga0395899_0000793 3300037312 Bacteria 30923
215 Ga0395899_0001375 3300037312 Bacteria 20874
216 Ga0395900_0001235 3300037418 Bacteria 31424
217 Ga0395898_0002540 3300037466 Bacteria 21394
218 Ga0395905_0000001 3300037471 Bacteria 2037079
219 Ga0395905_0001253 3300037471 Bacteria 31445
220 Ga0395901_0000941 3300038443 Bacteria 31690
221 Ga0395901_0000976 3300038443 Bacteria 31051
222 Ga0400483_174055 3300039062 Bacteria 16461
223 Ga0436361_1082833 3300039447 Bacteria 2483
224 Ga0451795_0684463 3300041456 Unclassified 4499
225 Ga0451855_0698113 3300041511 Bacteria 2253
226 Ga0439448_0000820 3300042005 Bacteria 7568
227 Ga0451577_0000072 3300042876 Bacteria 237934
228 Ga0451577_0002786 3300042876 Bacteria 20191
229 Ga0451577_0006074 3300042876 Bacteria 12142
230 Ga0451577_0056996 3300042876 Bacteria 3484
231 Ga0451577_0249675 3300042876 Bacteria 1606
232 Ga0466969_0040945 3300044656 Bacteria 2320
233 Ga0453683_0000042 3300044673 Bacteria 217883
234 Ga0453683_0000092 3300044673 Bacteria 136648
235 Ga0453683_0000224 3300044673 Bacteria 75668
236 Ga0453683_0109182 3300044673 Bacteria 1739
237 Ga0453684_0000138 3300044712 Bacteria 321864
238 Ga0453684_0000186 3300044712 Bacteria 273302
239 Ga0453684_0000213 3300044712 Bacteria 253663
240 Ga0453684_0000432 3300044712 Bacteria 170746
241 Ga0453684_0004497 3300044712 Bacteria 29294
242 Ga0453684_0005639 3300044712 Bacteria 24612
243 Ga0453684_0008454 3300044712 Bacteria 18430
244 Ga0453684_0009186 3300044712 Bacteria 17380
245 Ga0453684_0009631 3300044712 Bacteria 16843
246 Ga0453684_0017328 3300044712 Bacteria 11167
247 Ga0453684_0029283 3300044712 Bacteria 7828
248 Ga0453684_0030449 3300044712 Bacteria 7625
249 Ga0453684_0055432 3300044712 Bacteria 5153
250 Ga0453684_0057796 3300044712 Bacteria 5015
251 Ga0453684_0075230 3300044712 Unclassified 4246
252 Ga0453684_0082774 3300044712 Bacteria 3996
253 Ga0453684_0107548 3300044712 Unclassified 3396
254 Ga0453684_0173130 3300044712 Bacteria 2542
255 Ga0451576_0000065 3300045051 Bacteria 274445
256 Ga0451576_0000113 3300045051 Bacteria 208644
257 Ga0451576_0000369 3300045051 Bacteria 107433
258 Ga0451576_0003287 3300045051 Bacteria 22444
259 Ga0451576_0081676 3300045051 Bacteria 3361
260 Ga0451576_0189523 3300045051 Bacteria 2148
261 Ga0495585_0000459 3300046492 Bacteria 38959
262 Ga0495596_0019603 3300046500 Bacteria 2777
263 Ga0495606_0007866 3300046507 Bacteria 9411
264 Ga0495606_0017232 3300046507 Bacteria 5471
265 Ga0495610_0000084 3300046512 Bacteria 112459
266 Ga0495610_0000322 3300046512 Bacteria 50985
267 Ga0495631_0002726 3300046518 Bacteria 9795
268 Ga0495648_0006307 3300046524 Bacteria 9699
269 Ga0495652_0033146 3300046529 Bacteria 4513
270 Ga0495609_0018957 3300046538 Bacteria 3186
271 Ga0495633_0000083 3300046558 Bacteria 125035
272 Ga0495668_0000121 3300046616 Bacteria 116234
273 Ga0495625_0001612 3300046660 Bacteria 26626
274 Ga0495625_0001973 3300046660 Bacteria 23152
275 Ga0495625_0008135 3300046660 Bacteria 8986
276 Ga0495625_0094353 3300046660 Bacteria 2065
277 Ga0495661_0001101 3300046665 Bacteria 23675
278 Ga0495661_0035379 3300046665 Bacteria 3134
279 Ga0495687_001260 3300047443 Bacteria 23990
280 Ga0495686_0001123 3300047472 Bacteria 31643
281 Ga0495686_0020006 3300047472 Bacteria 4467
282 Ga0495686_0030329 3300047472 Bacteria 3512
283 Ga0496116_0003853 3300048919 Bacteria 14640
284 Ga0496117_0001253 3300048920 Bacteria 37795
285 Ga0496122_0000783 3300048925 Bacteria 61156
286 Ga0496122_0001580 3300048925 Bacteria 35795
287 Ga0496123_0000586 3300048926 Bacteria 62082
288 Ga0501032_0015487 3300049569 Bacteria 5376
289 Ga0501033_0000066 3300049570 Bacteria 99939
290 Ga0501034_0000526 3300049571 Bacteria 61297
291 Ga0501036_0014974 3300049572 Bacteria 6469
292 Ga0501039_0011444 3300049575 Bacteria 6754
293 Ga0501043_0009814 3300049579 Bacteria 7504
294 Ga0501223_002864 3300049663 Bacteria 3783
295 Ga0501035_0016717 3300049822 Bacteria 6764
296 Ga0501044_0028775 3300049823 Bacteria 5861
297 Ga0501045_0000763 3300049824 Bacteria 20622
298 nmdc:mga0k408_44_c1 3300050493 Bacteria 32015
299 nmdc:mga0k408_80_c1 3300050493 Bacteria 45357
300 Ga0500651_0000663 3300053093 Bacteria 17143
301 Ga0500608_014430 3300053122 Bacteria 3528
302 Ga0500614_003813 3300053123 Bacteria 3230
303 Ga0500618_000006 3300053125 Bacteria 239188
304 Ga0500622_0000173 3300053156 Bacteria 69414
305 2739302942 2738543023 Bacteria 6767879
306 2586206498 2585427687 Bacteria 5544917
307 2599480760 2599185184 Bacteria 6430550
308 2722726046 2721755487 Bacteria 6357185
309 2738755799 2738541283 Bacteria 7222293
310 2738761538 2738541284 Bacteria 5199923
311 2738852802 2738541302 Bacteria 5944758
312 2739586717 2739367651 Bacteria 6359826
313 2739615059 2739367656 Bacteria 5152243
314 2739645811 2739367663 Bacteria 5040914
315 2776615826 2775506987 Bacteria 5373360
316 2819547166 2818991437 Bacteria 5805520
317 2842727065 2842722452 Bacteria 6263924
318 2842904852 2842903701 Bacteria 6986368
319 2842910933 2842909656 Bacteria 6185908
320 2849283792 2849281842 Bacteria 6065644
321 2852626390 2852623160 Bacteria 4376875
322 2852628035 2852627209 Bacteria 5896285
323 2857628000 2857627736 Bacteria 5625397
324 2884934842 2884933994 Bacteria 4535041
325 2902050589 2902048731 Bacteria 4976191
326 2904447643 2904445276 Bacteria 5310396
327 2919188393 2919186247 Bacteria 6244071
328 2919439928 2919437846 Bacteria 6199444
329 2928081652 2928078545 Bacteria 6534839
330 2928150320 2928147474 Bacteria 6512076
331 2932085143 2932082852 Bacteria 6563563
332 2939667522 2939664404 Bacteria 6364494
333 2945997961 2945997725 Bacteria 6404843
334 2954020438 2954016120 Bacteria 6446024
335 2977234638 2977232053 Bacteria 5485925
336 3003236482 3003233435 Bacteria 4458031
337 8055590131 8055588893 Bacteria 3619545
338 SwRhRL2b_contig_2814806
339 JGI24740J21852_10005623
340 JGI25162J39368_1000097
341 JGI25164J39214_1001588
342 JGI25152J39213_1000044
343 JGI25150J39212_1000006
344 JGI25151J46595_10000024
345 JGI25165J46597_1001806
346 JGI25153J46596_10000026
347 rootH2_10001273
348 rootH1_10000975
349 Ga0055536_1000002
350 Ga0055530_10004763
351 Ga0065714_10002336
352 Ga0065714_10002820
353 Ga0065714_10003226
354 Ga0065714_10064557
355 Ga0065714_10069253
356 Ga0065704_10000218
357 Ga0065704_10081285
358 Ga0070658_10000675
359 Ga0070676_10000573
360 Ga0070683_100052566
361 Ga0070680_100019137
362 Ga0070660_100055224
363 Ga0070673_100078444
364 Ga0070659_100000076
365 Ga0070663_100008751
366 Ga0070678_100006070
367 Ga0070662_100002625
368 Ga0068867_100001804
369 Ga0070684_100057472
370 Ga0070672_100087863
371 Ga0070665_100000017
372 Ga0068855_100000021
373 Ga0068855_100001368
374 Ga0068855_100066298
375 Ga0068855_100074101
376 Ga0068857_100008631
377 Ga0068856_100000006
378 Ga0068856_100007924
379 Ga0068856_100072663
380 Ga0068852_100005157
381 Ga0070716_100027048
382 Ga0075366_10000496
383 Ga0097621_100002454
384 Ga0068871_100003252
385 Ga0068865_100000070
386 Ga0105244_10008729
387 Ga0105240_10000083
388 Ga0105240_10002855
389 Ga0105240_10008396
390 Ga0105240_10052542
391 Ga0105241_10002484
392 Ga0105241_10012206
393 Ga0105241_10024488
394 Ga0105237_10000138
395 Ga0105237_10000311
396 Ga0105237_10002154
397 Ga0105237_10008458
398 Ga0105237_10016924
399 Ga0105237_10017810
400 Ga0105237_10058718
401 Ga0105237_10074118
402 Ga0105238_10013683
403 Ga0105239_10000130
404 Ga0105239_10004003
405 Ga0105239_10006318
406 Ga0105239_10008634
407 Ga0105239_10010625
408 Ga0105239_10067803
409 Ga0105246_10047403
410 Ga0157373_10000057
411 Ga0157373_10000167
412 Ga0157373_10003284
413 Ga0157373_10016236
414 Ga0157371_10000286
415 Ga0157371_10000480
416 Ga0157371_10001194
417 Ga0157371_10003446
418 Ga0157371_10014257
419 Ga0157371_10021038
420 Ga0157371_10033359
421 Ga0157370_10000681
422 Ga0157370_10002658
423 Ga0157370_10005904
424 Ga0157370_10011041
425 Ga0157370_10032935
426 Ga0157370_10041280
427 Ga0157370_10123449
428 Ga0157370_10128563
429 Ga0157370_10209726
430 Ga0157369_10000152
431 Ga0157369_10000301
432 Ga0157374_10002863
433 Ga0157374_10003120
434 Ga0157374_10008123
435 Ga0157378_10009763
436 Ga0157378_10058050
437 Ga0163162_10000011
438 Ga0163162_10000026
439 Ga0163162_10001297
440 Ga0157372_10000037
441 Ga0157372_10000158
442 Ga0157372_10001857
443 Ga0157372_10052052
444 Ga0157372_10056349
445 Ga0157372_10240882
446 Ga0157375_10003442
447 Ga0157375_10034707
448 Ga0157375_10074870
449 Ga0157380_10000243
450 Ga0182008_10000025
451 Ga0182008_10000058
452 Ga0182008_10000059
453 Ga0182006_1000156
454 Ga0182006_1000470
455 Ga0182006_1000482
456 Ga0182006_1001296
457 Ga0182006_1027602
458 Ga0182007_10000008
459 Ga0182007_10021723
460 Ga0183373_1002
461 Ga0163161_10000305
462 Ga0163161_10000502
463 Ga0163161_10000778
464 Ga0163161_10010747
465 Ga0207427_100083
466 Ga0209437_100021
467 Ga0209437_100030
468 Ga0207425_1000003
469 Ga0209026_1001818
470 Ga0209026_1002354
471 Ga0209129_1000022
472 Ga0209233_1000035
473 Ga0209455_1000911
474 Ga0209676_1000022
475 Ga0209025_1000007
476 Ga0209758_1000012
477 Ga0209050_1000020
478 Ga0207647_10002483
479 Ga0207645_10002024
480 Ga0207705_10000035
481 Ga0207654_10005125
482 Ga0207654_10006104
483 Ga0207695_10000127
484 Ga0207695_10002500
485 Ga0207695_10006085
486 Ga0207671_10001040
487 Ga0207671_10003867
488 Ga0207671_10004476
489 Ga0207671_10004973
490 Ga0207671_10010870
491 Ga0207671_10025888
492 Ga0207671_10035390
493 Ga0207660_10021285
494 Ga0207657_10045199
495 Ga0207657_10066004
496 Ga0207694_10037432
497 Ga0207694_10114064
498 Ga0207644_10032556
499 Ga0207690_10000049
500 Ga0207706_10007385
501 Ga0207709_10000026
502 Ga0207704_10008834
503 Ga0207665_10040895
504 Ga0207667_10000014
505 Ga0207667_10039803
506 Ga0207667_10061379
507 Ga0207667_10134499
508 Ga0207702_10000023
509 Ga0207702_10025706
510 Ga0207648_10004191
511 Ga0207674_10199210
512 Ga0207683_10008462
513 Ga0268266_10000037
514 Ga0265334_10032629
515 Ga0265336_10009663
516 Ga0307517_10001130
517 Ga0307515_10000077
518 Ga0307515_10012976
519 Ga0307515_10013172
520 Ga0307515_10026002
521 Ga0265338_10057297
522 Ga0316176_1132212
523 Ga0316181_1251786
524 Ga0307509_10036898
525 Ga0307408_100000209
526 Ga0307408_100000393
527 Ga0307408_100001007
528 Ga0316576_10055729
529 Ga0316576_10126609
530 Ga0316578_10003857
531 Ga0316578_10010443
532 Ga0307405_10000017
533 Ga0307405_10005295
534 Ga0316577_10038728
535 Ga0307407_10000002
536 Ga0307412_10000001
537 Ga0307412_10004779
538 Ga0307412_10015874
539 Ga0307416_100000005
540 Ga0307414_10001057
541 Ga0307414_10027018
542 Ga0307411_10005626
543 Ga0307507_10000143
544 Ga0307510_10003117
545 Ga0316588_1008500
546 Ga0316584_0013883
547 Ga0316584_0034344
548 Ga0395899_0000017
549 Ga0395899_0000280
550 Ga0395899_0000793
551 Ga0395899_0001375
552 Ga0395900_0001235
553 Ga0395898_0002540
554 Ga0395905_0000001
555 Ga0395905_0001253
556 Ga0395901_0000941
557 Ga0395901_0000976
558 Ga0400483_174055
559 Ga0436361_1082833
560 Ga0451795_0684463
561 Ga0451855_0698113
562 Ga0439448_0000820
563 Ga0451577_0000072
564 Ga0451577_0002786
565 Ga0451577_0006074
566 Ga0451577_0056996
567 Ga0451577_0249675
568 Ga0466969_0040945
569 Ga0453683_0000042
570 Ga0453683_0000092
571 Ga0453683_0000224
572 Ga0453683_0109182
573 Ga0453684_0000138
574 Ga0453684_0000186
575 Ga0453684_0000213
576 Ga0453684_0000432
577 Ga0453684_0004497
578 Ga0453684_0005639
579 Ga0453684_0008454
580 Ga0453684_0009186
581 Ga0453684_0009631
582 Ga0453684_0017328
583 Ga0453684_0029283
584 Ga0453684_0030449
585 Ga0453684_0055432
586 Ga0453684_0057796
587 Ga0453684_0075230
588 Ga0453684_0082774
589 Ga0453684_0107548
590 Ga0453684_0173130
591 Ga0451576_0000065
592 Ga0451576_0000113
593 Ga0451576_0000369
594 Ga0451576_0003287
595 Ga0451576_0081676
596 Ga0451576_0189523
597 Ga0495585_0000459
598 Ga0495596_0019603
599 Ga0495606_0007866
600 Ga0495606_0017232
601 Ga0495610_0000084
602 Ga0495610_0000322
603 Ga0495631_0002726
604 Ga0495648_0006307
605 Ga0495652_0033146
606 Ga0495609_0018957
607 Ga0495633_0000083
608 Ga0495668_0000121
609 Ga0495625_0001612
610 Ga0495625_0001973
611 Ga0495625_0008135
612 Ga0495625_0094353
613 Ga0495661_0001101
614 Ga0495661_0035379
615 Ga0495687_001260
616 Ga0495686_0001123
617 Ga0495686_0020006
618 Ga0495686_0030329
619 Ga0496116_0003853
620 Ga0496117_0001253
621 Ga0496122_0000783
622 Ga0496122_0001580
623 Ga0496123_0000586
624 Ga0501032_0015487
625 Ga0501033_0000066
626 Ga0501034_0000526
627 Ga0501036_0014974
628 Ga0501039_0011444
629 Ga0501043_0009814
630 Ga0501223_002864
631 Ga0501035_0016717
632 Ga0501044_0028775
633 Ga0501045_0000763
634 nmdc:mga0k408_44_c1
635 nmdc:mga0k408_80_c1
636 Ga0500651_0000663
637 Ga0500608_014430
638 Ga0500614_003813
639 Ga0500618_000006
640 Ga0500622_0000173
641 2739302942
642 2586206498
643 2599480760
644 2722726046
645 2738755799
646 2738761538
647 2738852802
648 2739586717
649 2739615059
650 2739645811
651 2776615826
652 2819547166
653 2842727065
654 2842904852
655 2842910933
656 2849283792
657 2852626390
658 2852628035
659 2857628000
660 2884934842
661 2902050589
662 2904447643
663 2919188393
664 2919439928
665 2928081652
666 2928150320
667 2932085143
668 2939667522
669 2945997961
670 2954020438
671 2977234638
672 3003236482
673 8055590131

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

65

175

0.97

PF08665

PglZ

PglZ domain

287

482

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9433 2 120
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9423 4 124
2qzj-assembly5.cif.gz_E crystal structure of a two-component response regulator from clostridium difficile 0.9419 3 120
3crn-assembly1.cif.gz_B crystal structure of response regulator receiver domain protein (chey-like) from methanospirillum hungatei jf-1 0.9378 2 123
1nat-assembly1.cif.gz_A crystal structure of spoof from bacillus subtilis 0.9369 3 118
ID Description Score Start End Superfamily
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.947 4 82 3.40.50.2300
af_Q5A4X5_425_557_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9411 6 117 3.40.50.2300
2qzjA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9401 3 120 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9372 4 82 3.40.50.2300
af_P14375_1_129_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9359 3 117 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7X5E1L9-F1-model_v4 Stage 0 sporulation protein A homolog 0.9595 4 121 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A0U5GSV1-F1-model_v4 Putative transcriptional regulatory protein YedW 0.9558 3 117 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2A5K6L7-F1-model_v4 deleted 0.9538 2 122
AF-A0A2V7QUQ9-F1-model_v4 DNA-binding response regulator 0.9528 1 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7W0T7H3-F1-model_v4 Response regulator 0.9523 4 120 GO:0000160

Map