F413100

General Info

Members Datasets Scaffolds Average Seq Length
337 217 674 494

Family's Representative Sequence

Representative Sequence 3300025250|Ga0209026_1001653|Ga0209026_10016537
Length 562
Sequence MGWRNCLLNTRMPRPNEVLYCSVISRLHSKQVWSYKALLVTRISSNVQNRARGCLWWQNYLLTLLRVLGVKNQKNIVVIGSGFASLSAACFLAKEGYDVTMLEKNDQTGGRARIWEHEGFKFDMGPSWYWMPDVFENFFKQFGKKPSYYYQLKRLDPAYRIYFGKDDHLDVPAGRAQLYALFESIEPGSSKALDEFLRQAEYKYEVGMGEYVFKPSNSMTEYLSVDLLKSSRGLQLLTGMDKHVRKYFSNPKLVQLLEFPVLFLGAAPKNIPAMYSLMNYADLVLGTWYPMGGMNEIVKAMTSLAEELGVKIIKNAEVTKIDVKDGKARAVCTQSAVYDADMVVSGADYAHTDQHLLDKPFHNYSEKYWDSRTMSPSSLLFYIGLNKKVDGIRHHNLFFDEDFKQHSDEIYTHPQWPQKPLFYVCCPSKTDNTVAPERCENLFFLIPVAPDLEDTEAIRRQYFNLLMDRFENITGQSIRDNIVVNRSYAIDDFKADYHAFKGNAYGLANTLMQTAFLKPAMRNKKVKNMFYTGQLTVPGPGVPPAIISGEVVAREVVKYFGN

Samples

Sample ID Description Type Environment
1 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
8 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
9 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
67 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
68 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
69 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
70 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
71 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
101 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
107 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
125 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
126 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
127 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
128 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
129 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
130 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
131 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
135 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
142 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
143 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
144 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
145 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049651 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought Metagenome Rhizosphere
155 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
156 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
157 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
158 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
159 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
160 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
161 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
162 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
163 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
164 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
165 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
171 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
177 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
178 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
179 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
180 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
181 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
182 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
183 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
184 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
185 2738541302 Pedobacter sp. CF074 Isolate Unclassified
186 2739367656 Pedobacter sp. CF523 Isolate Unclassified
187 2739367663 Pedobacter sp. YR510 Isolate Unclassified
188 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
189 2818991437 Pedobacter terrae 518 Isolate Unclassified
190 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
191 2818991444 Filimonas endophytica 3197 Isolate Unclassified
192 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
193 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
194 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
195 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
196 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
197 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
198 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
199 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
200 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
201 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
202 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
203 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
204 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
205 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
206 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
207 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
208 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
209 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
210 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
211 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
212 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
213 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
214 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
215 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
216 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
217 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.54
Metatranscriptomes 0.3
Isolates 12.17

Biome Distribution

Category Percentage (%)
Aerial Root 0.59
Bulb 0
Endosphere 11.87
Nodule 0
Rhizoplane 0.59
Rhizosphere 72.11
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209026_1001653 3300025250 Bacteria 9443
2 JGI24740J21852_10006458 3300001979 Bacteria 4851
3 JGI24737J22298_10001116 3300001990 Bacteria 9434
4 JGI24737J22298_10016175 3300001990 Bacteria 2409
5 JGI24735J21928_10000009 3300002067 Bacteria 247425
6 JGI25162J39368_1000213 3300002737 Bacteria 60963
7 JGI25154J39366_1000014 3300002738 Bacteria 265287
8 JGI25158J39367_1003461 3300002739 Bacteria 2436
9 JGI25157J39369_1003109 3300002741 Bacteria 3564
10 JGI25157J39369_1004679 3300002741 Bacteria 2409
11 JGI25150J39212_1000013 3300002774 Bacteria 182307
12 JGI25151J46595_10000004 3300003187 Bacteria 494006
13 JGI25165J46597_1001587 3300003214 Bacteria 11061
14 JGI25153J46596_10000004 3300003215 Bacteria 494006
15 JGI25153J46596_10008899 3300003215 Bacteria 4738
16 rootH1_10006451 3300003316 Bacteria 7646
17 rootH1_10041615 3300003316 Bacteria 7405
18 rootH1_10135384 3300003316 Bacteria 4398
19 rootH2_10013635 3300003320 Bacteria 31266
20 rootH2_10027812 3300003320 Bacteria 13843
21 rootL2_10048850 3300003322 Bacteria 41711
22 rootL2_10051660 3300003322 Bacteria 5468
23 rootL2_10117455 3300003322 Bacteria 7773
24 rootL2_10174140 3300003322 Bacteria 8552
25 rootL2_10263602 3300003322 Bacteria 4088
26 rootH1_10008479 3300003323 Bacteria 21334
27 rootH1_10021131 3300003323 Bacteria 12738
28 rootH1_10021950 3300003323 Bacteria 4363
29 rootH1_10023028 3300003323 Bacteria 5004
30 rootH1_10102006 3300003323 Bacteria 8492
31 rootH1_10138576 3300003323 Bacteria 11483
32 rootH1_10212980 3300003323 Bacteria 2142
33 JGI25160J50197_1002671 3300003354 Bacteria 8208
34 Ga0055530_10001703 3300003791 Bacteria 15567
35 Ga0055531_10000030 3300003794 Bacteria 157459
36 Ga0055531_10000128 3300003794 Bacteria 85521
37 Ga0065165_1001408 3300005262 Bacteria 26207
38 Ga0065165_1004547 3300005262 Bacteria 8480
39 Ga0065165_1009998 3300005262 Bacteria 4170
40 Ga0065714_10002191 3300005288 Bacteria 100067
41 Ga0065714_10065268 3300005288 Bacteria 11281
42 Ga0065714_10067487 3300005288 Bacteria 5453
43 Ga0065714_10074252 3300005288 Bacteria 3064
44 Ga0065714_10077316 3300005288 Bacteria 2688
45 Ga0065704_10006917 3300005289 Bacteria 3977
46 Ga0070683_100005739 3300005329 Bacteria 10372
47 Ga0070683_100006900 3300005329 Bacteria 9542
48 Ga0068868_100045584 3300005338 Bacteria 3430
49 Ga0070673_100020438 3300005364 Bacteria 4777
50 Ga0070659_100000333 3300005366 Bacteria 36448
51 Ga0070659_100010907 3300005366 Bacteria 6704
52 Ga0070663_100004152 3300005455 Bacteria 8463
53 Ga0070662_100001673 3300005457 Bacteria 13641
54 Ga0070662_100027959 3300005457 Bacteria 3921
55 Ga0068867_100008600 3300005459 Bacteria 7207
56 Ga0070685_10002749 3300005466 Bacteria 9013
57 Ga0070679_100002696 3300005530 Bacteria 16171
58 Ga0070684_100063991 3300005535 Bacteria 3226
59 Ga0068853_100135064 3300005539 Bacteria 2210
60 Ga0070665_100000002 3300005548 Bacteria 849037
61 Ga0070665_100000178 3300005548 Bacteria 113002
62 Ga0068855_100056428 3300005563 Bacteria 4608
63 Ga0068855_100073326 3300005563 Bacteria 3977
64 Ga0068852_100016941 3300005616 Bacteria 5701
65 Ga0068870_10020199 3300005840 Bacteria 3240
66 Ga0068860_100006091 3300005843 Bacteria 12137
67 Ga0075366_10004824 3300006195 Bacteria 7276
68 Ga0097621_100002043 3300006237 Bacteria 13804
69 Ga0068871_100003586 3300006358 Bacteria 10667
70 Ga0068865_100000129 3300006881 Bacteria 39057
71 Ga0105240_10000104 3300009093 Bacteria 172082
72 Ga0105240_10003959 3300009093 Bacteria 22879
73 Ga0105240_10025609 3300009093 Bacteria 7748
74 Ga0105240_10062819 3300009093 Bacteria 4622
75 Ga0105241_10007734 3300009174 Bacteria 7901
76 Ga0105241_10009796 3300009174 Bacteria 7041
77 Ga0105242_10024500 3300009176 Bacteria 4767
78 Ga0105237_10002134 3300009545 Bacteria 24902
79 Ga0105237_10002467 3300009545 Bacteria 22954
80 Ga0105237_10006951 3300009545 Bacteria 12476
81 Ga0105237_10007664 3300009545 Bacteria 11797
82 Ga0105238_10012421 3300009551 Bacteria 8590
83 Ga0105239_10000032 3300010375 Bacteria 225528
84 Ga0105239_10000106 3300010375 Bacteria 117256
85 Ga0105239_10016565 3300010375 Bacteria 8147
86 Ga0105239_10078993 3300010375 Bacteria 3621
87 Ga0105239_10098835 3300010375 Bacteria 3226
88 Ga0105246_10018871 3300011119 Bacteria 4398
89 Ga0157373_10000009 3300013100 Bacteria 201551
90 Ga0157373_10000090 3300013100 Bacteria 78142
91 Ga0157373_10001153 3300013100 Bacteria 20229
92 Ga0157373_10002964 3300013100 Bacteria 12859
93 Ga0157373_10005227 3300013100 Bacteria 9749
94 Ga0157371_10000027 3300013102 Bacteria 269243
95 Ga0157371_10000037 3300013102 Bacteria 214866
96 Ga0157371_10000163 3300013102 Bacteria 97534
97 Ga0157371_10002956 3300013102 Bacteria 15812
98 Ga0157371_10013069 3300013102 Bacteria 6321
99 Ga0157371_10099990 3300013102 Bacteria 2057
100 Ga0157370_10003476 3300013104 Bacteria 18485
101 Ga0157370_10079378 3300013104 Bacteria 3091
102 Ga0157369_10000053 3300013105 Bacteria 162962
103 Ga0157369_10028319 3300013105 Bacteria 6202
104 Ga0157369_10046073 3300013105 Bacteria 4740
105 Ga0157369_10058798 3300013105 Bacteria 4146
106 Ga0157374_10002197 3300013296 Bacteria 16450
107 Ga0157374_10012487 3300013296 Bacteria 7393
108 Ga0157378_10041670 3300013297 Bacteria 4073
109 Ga0157378_10117515 3300013297 Bacteria 2447
110 Ga0163162_10000008 3300013306 Bacteria 316194
111 Ga0163162_10000894 3300013306 Bacteria 27767
112 Ga0163162_10024640 3300013306 Bacteria 5942
113 Ga0163162_10049285 3300013306 Bacteria 4221
114 Ga0157372_10000030 3300013307 Bacteria 179925
115 Ga0157372_10001521 3300013307 Bacteria 25206
116 Ga0157372_10003218 3300013307 Bacteria 17625
117 Ga0157372_10006535 3300013307 Bacteria 12407
118 Ga0157372_10018368 3300013307 Bacteria 7516
119 Ga0157372_10040698 3300013307 Bacteria 5134
120 Ga0157372_10075529 3300013307 Bacteria 3803
121 Ga0157375_10000052 3300013308 Bacteria 130032
122 Ga0157375_10041403 3300013308 Bacteria 4448
123 Ga0157375_10042752 3300013308 Bacteria 4388
124 Ga0157380_10000099 3300014326 Bacteria 48256
125 Ga0182008_10000028 3300014497 Bacteria 176968
126 Ga0157376_10001065 3300014969 Bacteria 17971
127 Ga0157376_10149201 3300014969 Bacteria 2107
128 Ga0182007_10000005 3300015262 Bacteria 442702
129 Ga0182005_1000200 3300015265 Bacteria 40796
130 Ga0163161_10000170 3300017792 Bacteria 59576
131 Ga0163161_10000903 3300017792 Bacteria 22958
132 Ga0163161_10022970 3300017792 Bacteria 4394
133 Ga0213872_10033268 3300021361 Bacteria 2362
134 Ga0209436_101283 3300025208 Bacteria 8990
135 Ga0207427_100043 3300025231 Bacteria 249595
136 Ga0209437_100134 3300025233 Bacteria 178305
137 Ga0209437_100170 3300025233 Bacteria 142489
138 Ga0207425_1000008 3300025245 Bacteria 618024
139 Ga0209646_1000002 3300025246 Bacteria 1425781
140 Ga0209026_1000268 3300025250 Bacteria 62806
141 Ga0209026_1000304 3300025250 Bacteria 53704
142 Ga0209129_1000042 3300025258 Bacteria 305537
143 Ga0209233_1000349 3300025261 Bacteria 43702
144 Ga0209233_1000611 3300025261 Bacteria 18290
145 Ga0209676_1000039 3300025292 Bacteria 443158
146 Ga0209025_1000020 3300025294 Bacteria 618024
147 Ga0209758_1000022 3300025297 Bacteria 618024
148 Ga0209758_1003380 3300025297 Bacteria 14604
149 Ga0209050_1000033 3300025298 Bacteria 442615
150 Ga0207426_1001825 3300025302 Bacteria 15760
151 Ga0209257_1000005 3300025304 Bacteria 1592528
152 Ga0209257_1000013 3300025304 Bacteria 1047305
153 Ga0207647_10000065 3300025904 Bacteria 82293
154 Ga0207647_10017463 3300025904 Bacteria 4877
155 Ga0207645_10000099 3300025907 Bacteria 64087
156 Ga0207643_10045643 3300025908 Bacteria 2475
157 Ga0207654_10005409 3300025911 Bacteria 6457
158 Ga0207695_10000048 3300025913 Bacteria 421800
159 Ga0207695_10007718 3300025913 Bacteria 13624
160 Ga0207695_10026207 3300025913 Bacteria 6508
161 Ga0207671_10001261 3300025914 Bacteria 29820
162 Ga0207671_10002527 3300025914 Bacteria 19488
163 Ga0207671_10002711 3300025914 Bacteria 18546
164 Ga0207671_10024222 3300025914 Bacteria 4568
165 Ga0207652_10000010 3300025921 Bacteria 247079
166 Ga0207694_10020085 3300025924 Bacteria 5052
167 Ga0207690_10000304 3300025932 Bacteria 34321
168 Ga0207690_10059125 3300025932 Bacteria 2596
169 Ga0207706_10000138 3300025933 Bacteria 79643
170 Ga0207704_10000015 3300025938 Bacteria 163572
171 Ga0207661_10004274 3300025944 Bacteria 10000
172 Ga0207667_10008279 3300025949 Bacteria 12371
173 Ga0207667_10046344 3300025949 Bacteria 4603
174 Ga0207677_10005540 3300026023 Bacteria 6858
175 Ga0207677_10026179 3300026023 Bacteria 3654
176 Ga0207639_10038020 3300026041 Bacteria 3578
177 Ga0207639_10092180 3300026041 Bacteria 2428
178 Ga0207678_10093758 3300026067 Bacteria 2565
179 Ga0207648_10015352 3300026089 Bacteria 7046
180 Ga0207675_100220974 3300026118 Bacteria 1825
181 Ga0207698_10016860 3300026142 Bacteria 4938
182 Ga0268266_10000022 3300028379 Bacteria 508060
183 Ga0268266_10000098 3300028379 Bacteria 182784
184 Ga0268264_10002095 3300028381 Bacteria 17820
185 Ga0307517_10001604 3300028786 Bacteria 37610
186 Ga0307515_10043411 3300028794 Bacteria 6990
187 Ga0307515_10054601 3300028794 Bacteria 5861
188 Ga0265327_10000164 3300031251 Bacteria 143027
189 Ga0265327_10012297 3300031251 Bacteria 5793
190 Ga0307408_100083007 3300031548 Bacteria 2400
191 Ga0265314_10044815 3300031711 Bacteria 3132
192 Ga0316576_10170631 3300031727 Bacteria 1642
193 Ga0307405_10000025 3300031731 Bacteria 123095
194 Ga0307407_10000001 3300031903 Bacteria 570048
195 Ga0307416_100000008 3300032002 Bacteria 401343
196 Ga0307416_100099829 3300032002 Bacteria 2522
197 Ga0307414_10000009 3300032004 Bacteria 359782
198 Ga0307414_10000082 3300032004 Bacteria 87561
199 Ga0307414_10004769 3300032004 Bacteria 7399
200 Ga0307510_10012029 3300033180 Bacteria 10257
201 Ga0316588_1002369 3300033528 Bacteria 3276
202 Ga0395899_0000001 3300037312 Bacteria 1750322
203 Ga0395899_0000394 3300037312 Bacteria 51861
204 Ga0395899_0001121 3300037312 Bacteria 23926
205 Ga0395899_0031559 3300037312 Bacteria 3981
206 Ga0395900_0002585 3300037418 Bacteria 19812
207 Ga0395900_0015898 3300037418 Bacteria 7666
208 Ga0395900_0023613 3300037418 Bacteria 6291
209 Ga0395898_0000488 3300037466 Bacteria 78598
210 Ga0395898_0039562 3300037466 Bacteria 4668
211 Ga0395898_0072685 3300037466 Bacteria 3322
212 Ga0395901_0100681 3300038443 Bacteria 3031
213 Ga0400483_112860 3300039062 Bacteria 65465
214 Ga0400483_187442 3300039062 Bacteria 39307
215 Ga0436361_0995481 3300039447 Bacteria 23100
216 Ga0466966_0031517 3300044684 Bacteria 3437
217 Ga0453684_0010664 3300044712 Bacteria 15642
218 Ga0451576_0035783 3300045051 Bacteria 5266
219 Ga0451576_0036896 3300045051 Bacteria 5179
220 Ga0495638_0000015 3300046460 Bacteria 414645
221 Ga0495650_0000023 3300046471 Bacteria 527763
222 Ga0495650_0000036 3300046471 Bacteria 400633
223 Ga0495585_0000191 3300046492 Bacteria 65147
224 Ga0495606_0000448 3300046507 Bacteria 67282
225 Ga0495606_0005383 3300046507 Bacteria 12275
226 Ga0495606_0030442 3300046507 Bacteria 3771
227 Ga0495606_0032778 3300046507 Bacteria 3594
228 Ga0495606_0092020 3300046507 Bacteria 1863
229 Ga0495610_0000039 3300046512 Bacteria 166799
230 Ga0495610_0005136 3300046512 Bacteria 9400
231 Ga0495616_0000873 3300046513 Bacteria 21883
232 Ga0495616_0003510 3300046513 Bacteria 10031
233 Ga0495616_0034252 3300046513 Bacteria 2639
234 Ga0495631_0004751 3300046518 Bacteria 7174
235 Ga0495632_0010615 3300046519 Bacteria 5438
236 Ga0495663_0000401 3300046525 Bacteria 15934
237 Ga0495663_0026352 3300046525 Bacteria 1701
238 Ga0495609_0000083 3300046538 Bacteria 115045
239 Ga0495609_0028281 3300046538 Bacteria 2559
240 Ga0495633_0010788 3300046558 Bacteria 4969
241 Ga0495633_0055775 3300046558 Bacteria 1857
242 Ga0495625_0000003 3300046660 Bacteria 686847
243 Ga0495625_0000018 3300046660 Bacteria 299567
244 Ga0495625_0009743 3300046660 Bacteria 7996
245 Ga0495625_0037203 3300046660 Bacteria 3573
246 Ga0495661_0002544 3300046665 Bacteria 13993
247 Ga0495661_0014923 3300046665 Bacteria 5192
248 Ga0495649_0000002 3300046694 Bacteria 1093458
249 Ga0495649_0000015 3300046694 Bacteria 246431
250 Ga0495660_0009427 3300046810 Bacteria 5694
251 Ga0495687_001257 3300047443 Bacteria 24087
252 Ga0495673_0012307 3300047469 Bacteria 4548
253 Ga0495686_0000111 3300047472 Bacteria 168708
254 Ga0495686_0012148 3300047472 Bacteria 6040
255 Ga0496115_0002302 3300048918 Bacteria 13673
256 Ga0496121_0000026 3300048924 Bacteria 450157
257 Ga0496125_0014854 3300048928 Bacteria 7562
258 Ga0496126_0014030 3300048929 Bacteria 8121
259 Ga0501298_003217 3300049521 Bacteria 2524
260 Ga0501300_002512 3300049523 Bacteria 2746
261 Ga0501031_0008174 3300049568 Bacteria 6809
262 Ga0501032_0002471 3300049569 Bacteria 14431
263 Ga0501033_0000034 3300049570 Bacteria 152329
264 Ga0501034_0000004 3300049571 Bacteria 382255
265 Ga0501034_0008038 3300049571 Bacteria 11191
266 Ga0501034_0058287 3300049571 Bacteria 3881
267 Ga0501036_0023073 3300049572 Bacteria 5237
268 Ga0501037_0003401 3300049573 Bacteria 11573
269 Ga0501038_0033015 3300049574 Bacteria 4560
270 Ga0501039_0001332 3300049575 Bacteria 18060
271 Ga0501043_0000923 3300049579 Bacteria 26062
272 Ga0501201_001050 3300049651 Bacteria 2586
273 Ga0501202_000603 3300049652 Bacteria 5270
274 Ga0501206_001229 3300049653 Bacteria 3208
275 Ga0501207_001667 3300049654 Bacteria 2798
276 Ga0501217_004413 3300049661 Bacteria 2891
277 Ga0501222_002734 3300049662 Bacteria 2442
278 Ga0501223_000418 3300049663 Bacteria 10325
279 Ga0501223_011546 3300049663 Bacteria 1773
280 Ga0501243_003934 3300049675 Bacteria 2217
281 Ga0501259_000859 3300049688 Bacteria 4994
282 Ga0501261_000669 3300049690 Bacteria 4302
283 Ga0501225_0015549 3300049705 Bacteria 2117
284 Ga0501241_002215 3300049758 Bacteria 3802
285 Ga0501035_0002384 3300049822 Bacteria 18456
286 Ga0501044_0012839 3300049823 Bacteria 9069
287 Ga0501045_0000118 3300049824 Bacteria 40712
288 nmdc:mga0k408_8226_c1 3300050493 Bacteria 5592
289 Ga0500635_0000647 3300053080 Bacteria 8928
290 Ga0500557_009571 3300053105 Bacteria 2382
291 Ga0500618_000424 3300053125 Bacteria 28474
292 Ga0500604_0004533 3300053151 Bacteria 3682
293 Ga0500616_0017679 3300053153 Bacteria 4043
294 Ga0500622_0000003 3300053156 Bacteria 613483
295 Ga0500622_0000008 3300053156 Bacteria 423636
296 Ga0500624_000372 3300053157 Bacteria 14389
297 2586211108 2585427687 Bacteria 5544917
298 2587747892 2585428060 Bacteria 5304711
299 2587866604 2585428095 Bacteria 3789702
300 2587942027 2585428115 Bacteria 4420269
301 2588234075 2585428187 Bacteria 4629388
302 2588446417 2588253712 Bacteria 5403181
303 2590614157 2588254257 Bacteria 5436094
304 2599479182 2599185184 Bacteria 6430550
305 2738854716 2738541302 Bacteria 5944758
306 2739617524 2739367656 Bacteria 5152243
307 2739647974 2739367663 Bacteria 5040914
308 2740033590 2739367866 Bacteria 4215900
309 2819547699 2818991437 Bacteria 5805520
310 2819577663 2818991442 Bacteria 8318214
311 2819588488 2818991444 Bacteria 6968812
312 2821143062 2821136567 Bacteria 8080116
313 2842726715 2842722452 Bacteria 6263924
314 2842911557 2842909656 Bacteria 6185908
315 2849286301 2849281842 Bacteria 6065644
316 2852625226 2852623160 Bacteria 4376875
317 2857629966 2857627736 Bacteria 5625397
318 2884635694 2884634485 Bacteria 3928637
319 2884934240 2884933994 Bacteria 4535041
320 2890804926 2890804823 Bacteria 3717572
321 2902049999 2902048731 Bacteria 4976191
322 2904470782 2904467357 Bacteria 8057758
323 2911139847 2911138879 Bacteria 5811561
324 2919440370 2919437846 Bacteria 6199444
325 2919697670 2919692658 Bacteria 5943958
326 2928082503 2928078545 Bacteria 6534839
327 2928148909 2928147474 Bacteria 6512076
328 2932086293 2932082852 Bacteria 6563563
329 2946002969 2945997725 Bacteria 6404843
330 2946020871 2946019816 Bacteria 4621265
331 2954019843 2954016120 Bacteria 6446024
332 2977235425 2977232053 Bacteria 5485925
333 2977246379 2977243572 Bacteria 4374394
334 2984575118 2984572630 Bacteria 4186940
335 2984608569 2984606641 Bacteria 4186971
336 2993373753 2993372514 Bacteria 4214139
337 2993484429 2993480792 Bacteria 4022225
338 Ga0209026_1001653
339 JGI24740J21852_10006458
340 JGI24737J22298_10001116
341 JGI24737J22298_10016175
342 JGI24735J21928_10000009
343 JGI25162J39368_1000213
344 JGI25154J39366_1000014
345 JGI25158J39367_1003461
346 JGI25157J39369_1003109
347 JGI25157J39369_1004679
348 JGI25150J39212_1000013
349 JGI25151J46595_10000004
350 JGI25165J46597_1001587
351 JGI25153J46596_10000004
352 JGI25153J46596_10008899
353 rootH1_10006451
354 rootH1_10041615
355 rootH1_10135384
356 rootH2_10013635
357 rootH2_10027812
358 rootL2_10048850
359 rootL2_10051660
360 rootL2_10117455
361 rootL2_10174140
362 rootL2_10263602
363 rootH1_10008479
364 rootH1_10021131
365 rootH1_10021950
366 rootH1_10023028
367 rootH1_10102006
368 rootH1_10138576
369 rootH1_10212980
370 JGI25160J50197_1002671
371 Ga0055530_10001703
372 Ga0055531_10000030
373 Ga0055531_10000128
374 Ga0065165_1001408
375 Ga0065165_1004547
376 Ga0065165_1009998
377 Ga0065714_10002191
378 Ga0065714_10065268
379 Ga0065714_10067487
380 Ga0065714_10074252
381 Ga0065714_10077316
382 Ga0065704_10006917
383 Ga0070683_100005739
384 Ga0070683_100006900
385 Ga0068868_100045584
386 Ga0070673_100020438
387 Ga0070659_100000333
388 Ga0070659_100010907
389 Ga0070663_100004152
390 Ga0070662_100001673
391 Ga0070662_100027959
392 Ga0068867_100008600
393 Ga0070685_10002749
394 Ga0070679_100002696
395 Ga0070684_100063991
396 Ga0068853_100135064
397 Ga0070665_100000002
398 Ga0070665_100000178
399 Ga0068855_100056428
400 Ga0068855_100073326
401 Ga0068852_100016941
402 Ga0068870_10020199
403 Ga0068860_100006091
404 Ga0075366_10004824
405 Ga0097621_100002043
406 Ga0068871_100003586
407 Ga0068865_100000129
408 Ga0105240_10000104
409 Ga0105240_10003959
410 Ga0105240_10025609
411 Ga0105240_10062819
412 Ga0105241_10007734
413 Ga0105241_10009796
414 Ga0105242_10024500
415 Ga0105237_10002134
416 Ga0105237_10002467
417 Ga0105237_10006951
418 Ga0105237_10007664
419 Ga0105238_10012421
420 Ga0105239_10000032
421 Ga0105239_10000106
422 Ga0105239_10016565
423 Ga0105239_10078993
424 Ga0105239_10098835
425 Ga0105246_10018871
426 Ga0157373_10000009
427 Ga0157373_10000090
428 Ga0157373_10001153
429 Ga0157373_10002964
430 Ga0157373_10005227
431 Ga0157371_10000027
432 Ga0157371_10000037
433 Ga0157371_10000163
434 Ga0157371_10002956
435 Ga0157371_10013069
436 Ga0157371_10099990
437 Ga0157370_10003476
438 Ga0157370_10079378
439 Ga0157369_10000053
440 Ga0157369_10028319
441 Ga0157369_10046073
442 Ga0157369_10058798
443 Ga0157374_10002197
444 Ga0157374_10012487
445 Ga0157378_10041670
446 Ga0157378_10117515
447 Ga0163162_10000008
448 Ga0163162_10000894
449 Ga0163162_10024640
450 Ga0163162_10049285
451 Ga0157372_10000030
452 Ga0157372_10001521
453 Ga0157372_10003218
454 Ga0157372_10006535
455 Ga0157372_10018368
456 Ga0157372_10040698
457 Ga0157372_10075529
458 Ga0157375_10000052
459 Ga0157375_10041403
460 Ga0157375_10042752
461 Ga0157380_10000099
462 Ga0182008_10000028
463 Ga0157376_10001065
464 Ga0157376_10149201
465 Ga0182007_10000005
466 Ga0182005_1000200
467 Ga0163161_10000170
468 Ga0163161_10000903
469 Ga0163161_10022970
470 Ga0213872_10033268
471 Ga0209436_101283
472 Ga0207427_100043
473 Ga0209437_100134
474 Ga0209437_100170
475 Ga0207425_1000008
476 Ga0209646_1000002
477 Ga0209026_1000268
478 Ga0209026_1000304
479 Ga0209129_1000042
480 Ga0209233_1000349
481 Ga0209233_1000611
482 Ga0209676_1000039
483 Ga0209025_1000020
484 Ga0209758_1000022
485 Ga0209758_1003380
486 Ga0209050_1000033
487 Ga0207426_1001825
488 Ga0209257_1000005
489 Ga0209257_1000013
490 Ga0207647_10000065
491 Ga0207647_10017463
492 Ga0207645_10000099
493 Ga0207643_10045643
494 Ga0207654_10005409
495 Ga0207695_10000048
496 Ga0207695_10007718
497 Ga0207695_10026207
498 Ga0207671_10001261
499 Ga0207671_10002527
500 Ga0207671_10002711
501 Ga0207671_10024222
502 Ga0207652_10000010
503 Ga0207694_10020085
504 Ga0207690_10000304
505 Ga0207690_10059125
506 Ga0207706_10000138
507 Ga0207704_10000015
508 Ga0207661_10004274
509 Ga0207667_10008279
510 Ga0207667_10046344
511 Ga0207677_10005540
512 Ga0207677_10026179
513 Ga0207639_10038020
514 Ga0207639_10092180
515 Ga0207678_10093758
516 Ga0207648_10015352
517 Ga0207675_100220974
518 Ga0207698_10016860
519 Ga0268266_10000022
520 Ga0268266_10000098
521 Ga0268264_10002095
522 Ga0307517_10001604
523 Ga0307515_10043411
524 Ga0307515_10054601
525 Ga0265327_10000164
526 Ga0265327_10012297
527 Ga0307408_100083007
528 Ga0265314_10044815
529 Ga0316576_10170631
530 Ga0307405_10000025
531 Ga0307407_10000001
532 Ga0307416_100000008
533 Ga0307416_100099829
534 Ga0307414_10000009
535 Ga0307414_10000082
536 Ga0307414_10004769
537 Ga0307510_10012029
538 Ga0316588_1002369
539 Ga0395899_0000001
540 Ga0395899_0000394
541 Ga0395899_0001121
542 Ga0395899_0031559
543 Ga0395900_0002585
544 Ga0395900_0015898
545 Ga0395900_0023613
546 Ga0395898_0000488
547 Ga0395898_0039562
548 Ga0395898_0072685
549 Ga0395901_0100681
550 Ga0400483_112860
551 Ga0400483_187442
552 Ga0436361_0995481
553 Ga0466966_0031517
554 Ga0453684_0010664
555 Ga0451576_0035783
556 Ga0451576_0036896
557 Ga0495638_0000015
558 Ga0495650_0000023
559 Ga0495650_0000036
560 Ga0495585_0000191
561 Ga0495606_0000448
562 Ga0495606_0005383
563 Ga0495606_0030442
564 Ga0495606_0032778
565 Ga0495606_0092020
566 Ga0495610_0000039
567 Ga0495610_0005136
568 Ga0495616_0000873
569 Ga0495616_0003510
570 Ga0495616_0034252
571 Ga0495631_0004751
572 Ga0495632_0010615
573 Ga0495663_0000401
574 Ga0495663_0026352
575 Ga0495609_0000083
576 Ga0495609_0028281
577 Ga0495633_0010788
578 Ga0495633_0055775
579 Ga0495625_0000003
580 Ga0495625_0000018
581 Ga0495625_0009743
582 Ga0495625_0037203
583 Ga0495661_0002544
584 Ga0495661_0014923
585 Ga0495649_0000002
586 Ga0495649_0000015
587 Ga0495660_0009427
588 Ga0495687_001257
589 Ga0495673_0012307
590 Ga0495686_0000111
591 Ga0495686_0012148
592 Ga0496115_0002302
593 Ga0496121_0000026
594 Ga0496125_0014854
595 Ga0496126_0014030
596 Ga0501298_003217
597 Ga0501300_002512
598 Ga0501031_0008174
599 Ga0501032_0002471
600 Ga0501033_0000034
601 Ga0501034_0000004
602 Ga0501034_0008038
603 Ga0501034_0058287
604 Ga0501036_0023073
605 Ga0501037_0003401
606 Ga0501038_0033015
607 Ga0501039_0001332
608 Ga0501043_0000923
609 Ga0501201_001050
610 Ga0501202_000603
611 Ga0501206_001229
612 Ga0501207_001667
613 Ga0501217_004413
614 Ga0501222_002734
615 Ga0501223_000418
616 Ga0501223_011546
617 Ga0501243_003934
618 Ga0501259_000859
619 Ga0501261_000669
620 Ga0501225_0015549
621 Ga0501241_002215
622 Ga0501035_0002384
623 Ga0501044_0012839
624 Ga0501045_0000118
625 nmdc:mga0k408_8226_c1
626 Ga0500635_0000647
627 Ga0500557_009571
628 Ga0500618_000424
629 Ga0500604_0004533
630 Ga0500616_0017679
631 Ga0500622_0000003
632 Ga0500622_0000008
633 Ga0500624_000372
634 2586211108
635 2587747892
636 2587866604
637 2587942027
638 2588234075
639 2588446417
640 2590614157
641 2599479182
642 2738854716
643 2739617524
644 2739647974
645 2740033590
646 2819547699
647 2819577663
648 2819588488
649 2821143062
650 2842726715
651 2842911557
652 2849286301
653 2852625226
654 2857629966
655 2884635694
656 2884934240
657 2890804926
658 2902049999
659 2904470782
660 2911139847
661 2919440370
662 2919697670
663 2928082503
664 2928148909
665 2932086293
666 2946002969
667 2946020871
668 2954019843
669 2977235425
670 2977246379
671 2984575118
672 2984608569
673 2993373753
674 2993484429

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

75

115

0.94

PF01266

DAO

FAD dependent oxidoreductase

75

121

0.91

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

78

143

0.91

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

83

557

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xrr-assembly1.cif.gz_B crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.989 30 62
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9889 30 62
4xrr-assembly1.cif.gz_A crystal structure of cals8 from micromonospora echinospora (p294s mutant) 0.986 30 62
4xr9-assembly1.cif.gz_A crystal structure of cals8 from micromonospora echinospora cocrystallized with nad and tdp-glucose 0.9851 30 62
4j0f-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9816 30 62
ID Description Score Start End Superfamily
2eq6B02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.008 30 63 3.50.50.60
2yquB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 1.002 30 65 3.50.50.60
5l1nB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.998 30 64 3.50.50.60
2qaeB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9955 30 64 3.50.50.60
af_Q2FY51_163_282_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.993 30 64 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A2E1FNC9-F1-model_v4 Phytoene dehydrogenase 0.9827 30 516 GO:0016117
GO:0016491
AF-A0A316JWV3-F1-model_v4 Phytoene desaturase 0.9818 30 514 GO:0016117
GO:0016491
AF-A0A6C1QTT7-F1-model_v4 Phytoene desaturase 0.9815 29 514 GO:0016117
GO:0016491
AF-A0A2D8WF83-F1-model_v4 deleted 0.9799 31 374
AF-A0A0R2SE11-F1-model_v4 Phytoene dehydrogenase 0.9797 87 516 GO:0016117
GO:0016491

Map