F413129

General Info

Members Datasets Scaffolds Average Seq Length
337 249 674 177

Family's Representative Sequence

Representative Sequence 3300030521|Ga0307511_10063179|Ga0307511_100631792
Length 200
Sequence MKAVTQQERKHGSAFETTAAAHAVEEQTQYLTFMLGSEVLGMGICAIKEIVEYHSLTVVPLMPECIRGVMNLRGAVVPVMDLSARLGRRPAQVTKRTCIVIVEIERDDVRQEVGVMVDAVNQVLDIPTSEIEPPPTFGARIRTDFIQGMGKVAGKFVILLDVNHVLSIDEIAELAKAVVNESTPPMAADSATSAEPNVRS

Samples

Sample ID Description Type Environment
1 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
33 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
34 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
50 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
51 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
77 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
81 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
82 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
83 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
84 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
85 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
93 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
94 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
95 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
103 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
104 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
105 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
106 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
107 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
108 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
109 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
110 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
111 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
112 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
113 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
114 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
115 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
120 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
126 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
131 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
134 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
135 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
136 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
141 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
142 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
143 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
144 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
145 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
146 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
147 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
148 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
149 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
150 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
151 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
152 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
153 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
161 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
162 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
165 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
166 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
167 2599185167 Pseudomonas sp. NFPP28 Isolate Rhizoplane
168 2599185179 Pseudomonas sp. NFR09 Isolate Rhizoplane
169 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
170 2599185190 Pseudomonas sp. NFPP04 Isolate Rhizoplane
171 2599185191 Pseudomonas sp. NFPP24 Isolate Rhizoplane
172 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
173 2599185248 Pseudomonas sp. NFACC08-1 Isolate Rhizoplane
174 2599185288 Pseudomonas sp. NFACC25 Isolate Rhizoplane
175 2599185289 Pseudomonas sp. NFACC51 Isolate Rhizoplane
176 2599185290 Pseudomonas sp. NFPP11 Isolate Rhizoplane
177 2599185291 Pseudomonas sp. NFACC48-1 Isolate Rhizoplane
178 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
179 2599185302 Pseudomonas sp. NFACC43 Isolate Rhizoplane
180 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
181 2599185304 Pseudomonas sp. NFACC47-1 Isolate Rhizoplane
182 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
183 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
184 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
185 2599185309 Pseudomonas sp. NFACC49-2 Isolate Rhizoplane
186 2599185310 Pseudomonas sp. NFACC09-4 Isolate Rhizoplane
187 2599185311 Pseudomonas sp. NFACC04-2 Isolate Rhizoplane
188 2599185312 Pseudomonas sp. NFACC32-1 Isolate Rhizoplane
189 2599185313 Pseudomonas sp. NFACC05-1 Isolate Rhizoplane
190 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
191 2599185315 Pseudomonas sp. NFACC44-2 Isolate Rhizoplane
192 2599185316 Pseudomonas sp. NFACC52 Isolate Rhizoplane
193 2599185317 Pseudomonas sp. NFACC06-1 Isolate Rhizoplane
194 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
195 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
196 2599185320 Pseudomonas sp. NFACC36 Isolate Rhizoplane
197 2599185321 Pseudomonas sp. NFACC54 Isolate Rhizoplane
198 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
199 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
200 2599185324 Pseudomonas sp. NFACC46-3 Isolate Rhizoplane
201 2599185325 Pseudomonas sp. NFACC56-3 Isolate Rhizoplane
202 2600254930 Pseudomonas sp. NFIX10 Isolate Rhizoplane
203 2643221571 Pseudomonas sp. Root569 Isolate Unclassified
204 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
205 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
206 2667528170 Pseudomonas sp. NFACC50-1 Isolate Rhizoplane
207 2667528176 Pseudomonas sp. NFACC11-2 Isolate Rhizoplane
208 2675903420 Pseudomonas fluorescens Ps006 Isolate Unclassified
209 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
210 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
211 2738541294 Pseudomonas sp. GV087 Isolate Unclassified
212 2738541309 Pseudomonas sp. GV047 Isolate Unclassified
213 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
214 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
215 2791355520 Pseudomonas sp. s211(2017) Isolate Unclassified
216 2808606361 Pseudomonas sp. SJZ075 Isolate Rhizosphere
217 2808606376 Pseudomonas sp. SJZ074 Isolate Rhizosphere
218 2808606378 Pseudomonas sp. SJZ078 Isolate Rhizosphere
219 2808606379 Pseudomonas sp. SJZ079 Isolate Rhizosphere
220 2808606380 Pseudomonas sp. SJZ085 Isolate Rhizosphere
221 2808606383 Pseudomonas sp. SJZ124 Isolate Rhizosphere
222 2808606385 Pseudomonas sp. SJZ103 Isolate Rhizosphere
223 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
224 2808606389 Pseudomonas sp. SJZ101 Isolate Rhizosphere
225 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
226 2826581358 Pseudomonas viridiflava CDRTc14 Isolate Unclassified
227 2842815866 Pseudomonas sp. R-72210 Isolate Unclassified
228 2842849001 Pseudomonas sp. R-72008 Isolate Unclassified
229 2842854478 Pseudomonas sp. R-71998 Isolate Unclassified
230 2852612431 Pseudomonas sp. SJZ073 Isolate Rhizosphere
231 2852667396 Pseudomonas sp. JAI120 Isolate Rhizosphere
232 2860867994 Pseudomonas sp. R1-43-08 Isolate Rhizosphere
233 2913036834 Pseudomonas viciae 11K1 Isolate Rhizosphere
234 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
235 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
236 2929144301 Pseudomonas sp. R-71838 Hybrid assembly Isolate Unclassified
237 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
238 2931369376 Pseudomonas fluorescens DR133 Isolate Rhizosphere
239 2931390751 Pseudomonas sp. DR208 Isolate Rhizosphere
240 2945928738 Pseudomonas cedrina W1I11 Isolate Rhizosphere
241 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
242 2988728565 Pseudomonas corrugata RM1-1-4 Isolate Rhizosphere
243 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
244 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
245 8054285046 Pseudomonas petroselini MAFF 311096 Isolate Nodule
246 8056131705 Pseudomonas asgharzadehiana SWRI132 Isolate Rhizosphere
247 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
248 8056148874 Pseudomonas khavaziana SWRI124 Isolate Rhizosphere
249 8056161164 Pseudomonas azadiae SWRI103 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.78
Metatranscriptomes 0
Isolates 25.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.56
Nodule 1.48
Rhizoplane 11.57
Rhizosphere 75.07
Stem 0
Stem Tuber 0
Unclassified 0.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307511_10063179 3300030521 Bacteria 2800
2 SwRhRL2b_contig_2454436 2162886007 Bacteria 1323
3 SwRhRL2b_contig_3834392 2162886007 Bacteria 7000
4 JGI24741J21665_1010010 3300001915 Bacteria 1717
5 rootL2_10063131 3300003322 Bacteria 4339
6 Ga0055530_10000402 3300003791 Bacteria 38808
7 Ga0055540_1000358 3300003792 Bacteria 38808
8 JGI25405J52794_10056362 3300003911 Bacteria 846
9 Ga0065714_10003187 3300005288 Bacteria 20114
10 Ga0065704_10000531 3300005289 Bacteria 21770
11 Ga0065704_10017805 3300005289 Bacteria 3350
12 Ga0065712_10000124 3300005290 Bacteria 105429
13 Ga0070670_100000115 3300005331 Bacteria 75393
14 Ga0070670_100000250 3300005331 Bacteria 48480
15 Ga0070666_10592855 3300005335 Bacteria 808
16 Ga0070682_100121867 3300005337 Bacteria 1752
17 Ga0070661_100000091 3300005344 Bacteria 73554
18 Ga0070669_100000322 3300005353 Bacteria 37474
19 Ga0070659_100938533 3300005366 Bacteria 757
20 Ga0070662_100000227 3300005457 Bacteria 33126
21 Ga0070662_100360019 3300005457 Bacteria 1193
22 Ga0070662_100386659 3300005457 Bacteria 1152
23 Ga0070679_100238852 3300005530 Bacteria 1775
24 Ga0068853_100000499 3300005539 Bacteria 26876
25 Ga0070686_100527460 3300005544 Bacteria 920
26 Ga0070665_100196879 3300005548 Bacteria 2016
27 Ga0068855_100048808 3300005563 Bacteria 4995
28 Ga0070664_100000053 3300005564 Bacteria 69415
29 Ga0070664_100255486 3300005564 Bacteria 1576
30 Ga0070664_100967256 3300005564 Bacteria 800
31 Ga0068854_100003662 3300005578 Bacteria 9614
32 Ga0070702_100071617 3300005615 Bacteria 2049
33 Ga0068852_101240749 3300005616 Bacteria 767
34 Ga0068851_10000520 3300005834 Bacteria 16854
35 Ga0068870_10249165 3300005840 Bacteria 1100
36 Ga0081455_10001210 3300005937 Bacteria 32325
37 Ga0081539_10035460 3300005985 Bacteria 2997
38 Ga0068871_101049796 3300006358 Archaea 760
39 Ga0079104_1000041 3300006946 Bacteria 186297
40 Ga0099826_10046540 3300006948 Bacteria 2955
41 Ga0105251_10000707 3300009011 Bacteria 30721
42 Ga0105251_10008253 3300009011 Bacteria 6294
43 Ga0105251_10063508 3300009011 Bacteria 1732
44 Ga0105251_10067258 3300009011 Bacteria 1674
45 Ga0105244_10000179 3300009036 Bacteria 64199
46 Ga0105244_10006204 3300009036 Bacteria 7795
47 Ga0105244_10017346 3300009036 Bacteria 4070
48 Ga0105244_10114097 3300009036 Bacteria 1312
49 Ga0105250_10000199 3300009092 Bacteria 51075
50 Ga0105250_10159099 3300009092 Bacteria 942
51 Ga0105240_10085353 3300009093 Bacteria 3868
52 Ga0105240_10128597 3300009093 Bacteria 3041
53 Ga0105240_10140063 3300009093 Bacteria 2893
54 Ga0105243_10004443 3300009148 Bacteria 11091
55 Ga0105243_10144151 3300009148 Bacteria 2036
56 Ga0105242_10008757 3300009176 Bacteria 7764
57 Ga0105248_10109156 3300009177 Bacteria 3119
58 Ga0105237_10000455 3300009545 Bacteria 58035
59 Ga0105237_10202372 3300009545 Bacteria 1986
60 Ga0105237_10308020 3300009545 Bacteria 1586
61 Ga0105237_10368220 3300009545 Bacteria 1442
62 Ga0105238_10967985 3300009551 Bacteria 871
63 Ga0105246_10000006 3300011119 Bacteria 83887
64 Ga0105246_10545740 3300011119 Bacteria 992
65 Ga0105246_10892440 3300011119 Bacteria 797
66 Ga0157373_10013585 3300013100 Bacteria 5972
67 Ga0157373_10077612 3300013100 Bacteria 2343
68 Ga0157370_10287736 3300013104 Bacteria 1518
69 Ga0157369_10000642 3300013105 Bacteria 45130
70 Ga0157369_10020695 3300013105 Bacteria 7355
71 Ga0157372_10586245 3300013307 Bacteria 1300
72 Ga0157372_10656558 3300013307 Bacteria 1221
73 Ga0157375_10117609 3300013308 Bacteria 2764
74 Ga0182008_10001631 3300014497 Bacteria 14863
75 Ga0182006_1000143 3300015261 Bacteria 76634
76 Ga0182007_10056203 3300015262 Bacteria 1293
77 Ga0182007_10166939 3300015262 Bacteria 755
78 Ga0163161_10130399 3300017792 Bacteria 1896
79 Ga0209050_1000009 3300025298 Bacteria 1047265
80 Ga0209051_1000438 3300025303 Bacteria 56435
81 Ga0209257_1004767 3300025304 Bacteria 10124
82 Ga0207656_10000410 3300025321 Bacteria 14409
83 Ga0207696_1000090 3300025711 Bacteria 188474
84 Ga0207696_1000176 3300025711 Bacteria 100134
85 Ga0207696_1000177 3300025711 Bacteria 100134
86 Ga0207655_1000006 3300025728 Bacteria 861092
87 Ga0207655_1000457 3300025728 Bacteria 53535
88 Ga0207655_1005071 3300025728 Bacteria 9102
89 Ga0207713_1000731 3300025735 Bacteria 30717
90 Ga0207713_1006468 3300025735 Bacteria 7133
91 Ga0207713_1154753 3300025735 Bacteria 736
92 Ga0207680_10607697 3300025903 Bacteria 782
93 Ga0207643_10224543 3300025908 Bacteria 1151
94 Ga0207695_10040157 3300025913 Bacteria 5021
95 Ga0207695_10065749 3300025913 Bacteria 3727
96 Ga0207695_10587705 3300025913 Bacteria 995
97 Ga0207671_10001360 3300025914 Bacteria 28567
98 Ga0207671_10118743 3300025914 Bacteria 2020
99 Ga0207671_10127420 3300025914 Bacteria 1951
100 Ga0207671_10283680 3300025914 Bacteria 1306
101 Ga0207649_10000095 3300025920 Bacteria 73954
102 Ga0207649_10332992 3300025920 Bacteria 1119
103 Ga0207681_10000401 3300025923 Bacteria 30136
104 Ga0207650_10000125 3300025925 Bacteria 96107
105 Ga0207650_10000727 3300025925 Bacteria 25549
106 Ga0207690_10922023 3300025932 Bacteria 725
107 Ga0207706_10000501 3300025933 Bacteria 41713
108 Ga0207706_10011634 3300025933 Bacteria 8020
109 Ga0207706_10017775 3300025933 Bacteria 6404
110 Ga0207686_10038366 3300025934 Bacteria 2898
111 Ga0207709_10167331 3300025935 Bacteria 1539
112 Ga0207711_10307783 3300025941 Bacteria 1462
113 Ga0207679_10000008 3300025945 Bacteria 412057
114 Ga0207679_10065275 3300025945 Bacteria 2723
115 Ga0207679_10195899 3300025945 Bacteria 1684
116 Ga0207640_10213379 3300025981 Bacteria 1472
117 Ga0207683_10685401 3300026121 Archaea 950
118 Ga0207698_10022843 3300026142 Bacteria 4359
119 Ga0207698_10056549 3300026142 Bacteria 3030
120 Ga0207698_10356808 3300026142 Bacteria 1383
121 Ga0209281_1000073 3300027111 Bacteria 269036
122 Ga0209282_1062416 3300027666 Bacteria 2069
123 Ga0268266_10000704 3300028379 Bacteria 45162
124 Ga0268266_10035221 3300028379 Bacteria 4258
125 Ga0268266_10196838 3300028379 Bacteria 1843
126 Ga0265324_10019512 3300029957 Bacteria 2442
127 Ga0316177_1105702 3300030731 Bacteria 885
128 Ga0314311_1257646 3300030733 Bacteria 2755
129 Ga0316181_1058919 3300030744 Bacteria 1078
130 Ga0316182_1322034 3300030745 Bacteria 945
131 Ga0265320_10079557 3300031240 Bacteria 1532
132 Ga0265325_10081661 3300031241 Bacteria 1606
133 Ga0265339_10331885 3300031249 Bacteria 720
134 Ga0265331_10009758 3300031250 Bacteria 5362
135 Ga0265331_10011926 3300031250 Bacteria 4737
136 Ga0265331_10020069 3300031250 Bacteria 3438
137 Ga0265316_10095853 3300031344 Bacteria 2259
138 Ga0307408_100000465 3300031548 Bacteria 35428
139 Ga0307408_100051972 3300031548 Bacteria 2954
140 Ga0307408_100671392 3300031548 Bacteria 929
141 Ga0265313_10017551 3300031595 Bacteria 4061
142 Ga0265314_10059983 3300031711 Bacteria 2599
143 Ga0307405_10003615 3300031731 Bacteria 7149
144 Ga0307405_10011196 3300031731 Bacteria 4685
145 Ga0307405_10103358 3300031731 Bacteria 1915
146 Ga0307413_10020257 3300031824 Bacteria 3533
147 Ga0307413_10274276 3300031824 Bacteria 1264
148 Ga0307413_10625006 3300031824 Unclassified 885
149 Ga0307406_10020661 3300031901 Bacteria 3881
150 Ga0307407_10037215 3300031903 Bacteria 2687
151 Ga0307412_10006494 3300031911 Bacteria 6615
152 Ga0307412_10009858 3300031911 Bacteria 5489
153 Ga0307412_10029013 3300031911 Bacteria 3468
154 Ga0307409_100049451 3300031995 Bacteria 3206
155 Ga0307416_100247846 3300032002 Bacteria 1731
156 Ga0307414_10081528 3300032004 Bacteria 2369
157 Ga0307414_10085831 3300032004 Bacteria 2320
158 Ga0307411_10023258 3300032005 Bacteria 3667
159 Ga0307411_10090203 3300032005 Bacteria 2137
160 Ga0373931_0001523 3300035691 Bacteria 9987
161 Ga0439438_012785 3300041405 Bacteria 2558
162 Ga0439447_028965 3300041407 Bacteria 1404
163 Ga0439466_0031131 3300041411 Bacteria 1826
164 Ga0451841_1072042 3300041498 Bacteria 1176
165 Ga0439445_0048490 3300042004 Bacteria 1142
166 Ga0439432_000027 3300042006 Bacteria 50166
167 Ga0439432_024088 3300042006 Bacteria 2001
168 Ga0439432_084750 3300042006 Bacteria 957
169 Ga0439452_034013 3300042010 Bacteria 1234
170 Ga0439463_061707 3300042016 Bacteria 958
171 Ga0439446_0087374 3300042156 Bacteria 972
172 Ga0439458_0042144 3300042157 Bacteria 1111
173 Ga0451577_0632692 3300042876 Bacteria 970
174 Ga0466972_0113598 3300044658 Bacteria 1279
175 Ga0453683_0228063 3300044673 Bacteria 1185
176 Ga0466965_0094646 3300044683 Bacteria 1522
177 Ga0466966_0062119 3300044684 Bacteria 2356
178 Ga0466964_0001305 3300044706 Bacteria 8502
179 Ga0453684_0001598 3300044712 Bacteria 62237
180 Ga0453684_0183588 3300044712 Bacteria 2453
181 Ga0453684_0210562 3300044712 Bacteria 2260
182 Ga0453684_0372897 3300044712 Bacteria 1604
183 Ga0453684_0433902 3300044712 Bacteria 1465
184 Ga0453684_1221828 3300044712 Bacteria 788
185 Ga0466970_0004196 3300044765 Bacteria 7090
186 Ga0466970_0197862 3300044765 Bacteria 1118
187 Ga0466960_0051416 3300044901 Bacteria 1990
188 Ga0466960_0324693 3300044901 Unclassified 872
189 Ga0466959_0018070 3300045049 Bacteria 5175
190 Ga0466959_0051624 3300045049 Bacteria 3015
191 Ga0466959_0136787 3300045049 Bacteria 1734
192 Ga0451576_0000034 3300045051 Bacteria 390778
193 Ga0451576_0069303 3300045051 Bacteria 3670
194 Ga0451576_0155721 3300045051 Bacteria 2383
195 Ga0451576_0454898 3300045051 Bacteria 1344
196 Ga0451576_0809734 3300045051 Bacteria 984
197 Ga0466958_0341160 3300045836 Bacteria 964
198 Ga0466967_0007046 3300045976 Bacteria 8053
199 Ga0466967_1016401 3300045976 Bacteria 826
200 Ga0495627_000009 3300046453 Bacteria 463964
201 Ga0495627_024961 3300046453 Bacteria 1942
202 Ga0495591_000002 3300046458 Bacteria 455013
203 Ga0495638_0106550 3300046460 Bacteria 1670
204 Ga0495605_0000007 3300046474 Bacteria 358289
205 Ga0495605_0005366 3300046474 Bacteria 7468
206 Ga0495594_0103747 3300046499 Bacteria 1600
207 Ga0495607_0000045 3300046501 Bacteria 125217
208 Ga0495583_0000007 3300046506 Bacteria 434661
209 Ga0495610_0026211 3300046512 Bacteria 3115
210 Ga0495610_0233142 3300046512 Bacteria 737
211 Ga0495620_0000014 3300046515 Bacteria 157890
212 Ga0495631_0133131 3300046518 Bacteria 1068
213 Ga0495632_0038208 3300046519 Bacteria 2432
214 Ga0495637_0013802 3300046520 Bacteria 3827
215 Ga0495637_0034998 3300046520 Bacteria 2196
216 Ga0495643_0187791 3300046522 Bacteria 1000
217 Ga0495648_0151100 3300046524 Bacteria 1211
218 Ga0495654_0004087 3300046530 Bacteria 8757
219 Ga0495609_0000004 3300046538 Bacteria 697346
220 Ga0495609_0163152 3300046538 Bacteria 943
221 Ga0495597_0000023 3300046542 Bacteria 149302
222 Ga0495597_0080809 3300046542 Bacteria 1390
223 Ga0495633_0000135 3300046558 Bacteria 97871
224 Ga0495611_0001820 3300046648 Bacteria 10221
225 Ga0495625_0123207 3300046660 Bacteria 1762
226 Ga0495661_0000106 3300046665 Bacteria 100351
227 Ga0495670_0100060 3300046691 Bacteria 1492
228 Ga0495671_0010183 3300046692 Bacteria 5223
229 Ga0495589_0000966 3300046794 Bacteria 17567
230 Ga0495660_0001006 3300046810 Bacteria 20524
231 Ga0495660_0016907 3300046810 Bacteria 4201
232 Ga0495660_0088653 3300046810 Bacteria 1611
233 Ga0495683_0000004 3300047323 Bacteria 321136
234 Ga0495679_006593 3300047446 Bacteria 4971
235 Ga0495673_0005159 3300047469 Bacteria 7958
236 Ga0495673_0006578 3300047469 Bacteria 6815
237 Ga0495681_0123849 3300047470 Bacteria 1106
238 Ga0496122_0012130 3300048925 Bacteria 8629
239 Ga0496123_0043768 3300048926 Bacteria 3070
240 Ga0496123_0149060 3300048926 Bacteria 1265
241 Ga0496124_0000035 3300048927 Bacteria 318099
242 Ga0496124_0040811 3300048927 Bacteria 4010
243 Ga0496124_0073017 3300048927 Bacteria 2840
244 Ga0496125_0011521 3300048928 Bacteria 8835
245 Ga0495678_000014 3300049459 Bacteria 313755
246 nmdc:mga0k408_14038_c1 3300050493 Bacteria 4404
247 Ga0500583_0025554 3300053092 Bacteria 2524
248 Ga0500583_0131537 3300053092 Bacteria 1241
249 Ga0500641_0022399 3300053096 Bacteria 2419
250 Ga0500617_129818 3300053124 Bacteria 1027
251 Ga0500573_0164756 3300053140 Bacteria 1204
252 Ga0500588_0017082 3300053146 Bacteria 1888
253 2511824278 2511231156 Bacteria 6845832
254 2599330971 2599185155 Bacteria 5827168
255 2599399791 2599185167 Bacteria 6353609
256 2599454491 2599185179 Bacteria 6611171
257 2599502108 2599185188 Bacteria 6164180
258 2599515666 2599185190 Bacteria 6285678
259 2599522229 2599185191 Bacteria 6297582
260 2599611141 2599185212 Bacteria 6765997
261 2599770037 2599185248 Bacteria 6696816
262 2599880712 2599185288 Bacteria 6666191
263 2599887361 2599185289 Bacteria 6778765
264 2599895044 2599185290 Bacteria 6289611
265 2599898474 2599185291 Bacteria 6775623
266 2599932834 2599185300 Bacteria 6062622
267 2599942590 2599185302 Bacteria 5954930
268 2599949763 2599185303 Bacteria 6512725
269 2599953339 2599185304 Bacteria 5951361
270 2599958933 2599185305 Bacteria 6748700
271 2599968987 2599185306 Bacteria 6637356
272 2599980244 2599185308 Bacteria 6621546
273 2599982487 2599185309 Bacteria 5969593
274 2599992217 2599185310 Bacteria 6014457
275 2599994475 2599185311 Bacteria 6354990
276 2599999320 2599185312 Bacteria 5912071
277 2600006073 2599185313 Bacteria 6658188
278 2600009444 2599185314 Bacteria 6621749
279 2600017223 2599185315 Bacteria 6771107
280 2600023410 2599185316 Bacteria 6320029
281 2600028318 2599185317 Bacteria 6435722
282 2600035681 2599185318 Bacteria 6961590
283 2600044953 2599185319 Bacteria 6637840
284 2600047157 2599185320 Bacteria 5963263
285 2600052046 2599185321 Bacteria 6764560
286 2600057083 2599185322 Bacteria 6763055
287 2600064996 2599185323 Bacteria 6688755
288 2600069736 2599185324 Bacteria 6590677
289 2600077433 2599185325 Bacteria 6324919
290 2600357233 2600254930 Bacteria 6431253
291 2643870222 2643221571 Bacteria 6228673
292 2644284752 2643221650 Bacteria 7029547
293 2652546379 2651869719 Bacteria 6047974
294 2671090966 2667528170 Bacteria 6786960
295 2671124716 2667528176 Bacteria 6724917
296 2677899704 2675903420 Bacteria 6247433
297 2678263991 2675903515 Bacteria 6580491
298 2738687837 2738541271 Bacteria 5657310
299 2738806167 2738541294 Bacteria 6925949
300 2738893527 2738541309 Bacteria 6926455
301 2739263728 2738543016 Bacteria 5657564
302 2745004447 2744054620 Bacteria 6551379
303 2794597878 2791355520 Bacteria 5948615
304 2808854801 2808606361 Bacteria 6136259
305 2808925156 2808606376 Bacteria 6248667
306 2808935004 2808606378 Bacteria 6177535
307 2808943508 2808606379 Bacteria 5022697
308 2808947238 2808606380 Bacteria 6248705
309 2808963401 2808606383 Bacteria 6138645
310 2808980310 2808606385 Bacteria 6711065
311 2808996031 2808606388 Bacteria 6706662
312 2808998194 2808606389 Bacteria 6138126
313 2825657230 2825651385 Bacteria 6715909
314 2826582076 2826581358 Bacteria 5963467
315 2842819437 2842815866 Bacteria 5947510
316 2842852412 2842849001 Bacteria 5924277
317 2842859925 2842854478 Bacteria 6143501
318 2852613906 2852612431 Bacteria 6885235
319 2852668358 2852667396 Bacteria 6885555
320 2860869957 2860867994 Bacteria 5645326
321 2913039168 2913036834 Bacteria 6704877
322 2919485183 2919481497 Bacteria 6907839
323 2923586680 2923586266 Bacteria 6565975
324 2929146444 2929144301 Bacteria 6622272
325 2929191941 2929189879 Bacteria 5930554
326 2931369884 2931369376 Bacteria 6847892
327 2931395663 2931390751 Bacteria 6273349
328 2945933656 2945928738 Bacteria 6053221
329 2947237162 2947233263 Bacteria 6439278
330 2988729557 2988728565 Bacteria 6124362
331 3007422446 3007419365 Bacteria 7026924
332 3007869822 3007866637 Bacteria 5899198
333 8054290903 8054285046 Bacteria 6919322
334 8056134614 8056131705 Bacteria 6107031
335 8056145463 8056143049 Bacteria 6307666
336 8056154044 8056148874 Bacteria 6479865
337 8056166217 8056161164 Bacteria 6106669
338 Ga0307511_10063179
339 SwRhRL2b_contig_2454436
340 SwRhRL2b_contig_3834392
341 JGI24741J21665_1010010
342 rootL2_10063131
343 Ga0055530_10000402
344 Ga0055540_1000358
345 JGI25405J52794_10056362
346 Ga0065714_10003187
347 Ga0065704_10000531
348 Ga0065704_10017805
349 Ga0065712_10000124
350 Ga0070670_100000115
351 Ga0070670_100000250
352 Ga0070666_10592855
353 Ga0070682_100121867
354 Ga0070661_100000091
355 Ga0070669_100000322
356 Ga0070659_100938533
357 Ga0070662_100000227
358 Ga0070662_100360019
359 Ga0070662_100386659
360 Ga0070679_100238852
361 Ga0068853_100000499
362 Ga0070686_100527460
363 Ga0070665_100196879
364 Ga0068855_100048808
365 Ga0070664_100000053
366 Ga0070664_100255486
367 Ga0070664_100967256
368 Ga0068854_100003662
369 Ga0070702_100071617
370 Ga0068852_101240749
371 Ga0068851_10000520
372 Ga0068870_10249165
373 Ga0081455_10001210
374 Ga0081539_10035460
375 Ga0068871_101049796
376 Ga0079104_1000041
377 Ga0099826_10046540
378 Ga0105251_10000707
379 Ga0105251_10008253
380 Ga0105251_10063508
381 Ga0105251_10067258
382 Ga0105244_10000179
383 Ga0105244_10006204
384 Ga0105244_10017346
385 Ga0105244_10114097
386 Ga0105250_10000199
387 Ga0105250_10159099
388 Ga0105240_10085353
389 Ga0105240_10128597
390 Ga0105240_10140063
391 Ga0105243_10004443
392 Ga0105243_10144151
393 Ga0105242_10008757
394 Ga0105248_10109156
395 Ga0105237_10000455
396 Ga0105237_10202372
397 Ga0105237_10308020
398 Ga0105237_10368220
399 Ga0105238_10967985
400 Ga0105246_10000006
401 Ga0105246_10545740
402 Ga0105246_10892440
403 Ga0157373_10013585
404 Ga0157373_10077612
405 Ga0157370_10287736
406 Ga0157369_10000642
407 Ga0157369_10020695
408 Ga0157372_10586245
409 Ga0157372_10656558
410 Ga0157375_10117609
411 Ga0182008_10001631
412 Ga0182006_1000143
413 Ga0182007_10056203
414 Ga0182007_10166939
415 Ga0163161_10130399
416 Ga0209050_1000009
417 Ga0209051_1000438
418 Ga0209257_1004767
419 Ga0207656_10000410
420 Ga0207696_1000090
421 Ga0207696_1000176
422 Ga0207696_1000177
423 Ga0207655_1000006
424 Ga0207655_1000457
425 Ga0207655_1005071
426 Ga0207713_1000731
427 Ga0207713_1006468
428 Ga0207713_1154753
429 Ga0207680_10607697
430 Ga0207643_10224543
431 Ga0207695_10040157
432 Ga0207695_10065749
433 Ga0207695_10587705
434 Ga0207671_10001360
435 Ga0207671_10118743
436 Ga0207671_10127420
437 Ga0207671_10283680
438 Ga0207649_10000095
439 Ga0207649_10332992
440 Ga0207681_10000401
441 Ga0207650_10000125
442 Ga0207650_10000727
443 Ga0207690_10922023
444 Ga0207706_10000501
445 Ga0207706_10011634
446 Ga0207706_10017775
447 Ga0207686_10038366
448 Ga0207709_10167331
449 Ga0207711_10307783
450 Ga0207679_10000008
451 Ga0207679_10065275
452 Ga0207679_10195899
453 Ga0207640_10213379
454 Ga0207683_10685401
455 Ga0207698_10022843
456 Ga0207698_10056549
457 Ga0207698_10356808
458 Ga0209281_1000073
459 Ga0209282_1062416
460 Ga0268266_10000704
461 Ga0268266_10035221
462 Ga0268266_10196838
463 Ga0265324_10019512
464 Ga0316177_1105702
465 Ga0314311_1257646
466 Ga0316181_1058919
467 Ga0316182_1322034
468 Ga0265320_10079557
469 Ga0265325_10081661
470 Ga0265339_10331885
471 Ga0265331_10009758
472 Ga0265331_10011926
473 Ga0265331_10020069
474 Ga0265316_10095853
475 Ga0307408_100000465
476 Ga0307408_100051972
477 Ga0307408_100671392
478 Ga0265313_10017551
479 Ga0265314_10059983
480 Ga0307405_10003615
481 Ga0307405_10011196
482 Ga0307405_10103358
483 Ga0307413_10020257
484 Ga0307413_10274276
485 Ga0307413_10625006
486 Ga0307406_10020661
487 Ga0307407_10037215
488 Ga0307412_10006494
489 Ga0307412_10009858
490 Ga0307412_10029013
491 Ga0307409_100049451
492 Ga0307416_100247846
493 Ga0307414_10081528
494 Ga0307414_10085831
495 Ga0307411_10023258
496 Ga0307411_10090203
497 Ga0373931_0001523
498 Ga0439438_012785
499 Ga0439447_028965
500 Ga0439466_0031131
501 Ga0451841_1072042
502 Ga0439445_0048490
503 Ga0439432_000027
504 Ga0439432_024088
505 Ga0439432_084750
506 Ga0439452_034013
507 Ga0439463_061707
508 Ga0439446_0087374
509 Ga0439458_0042144
510 Ga0451577_0632692
511 Ga0466972_0113598
512 Ga0453683_0228063
513 Ga0466965_0094646
514 Ga0466966_0062119
515 Ga0466964_0001305
516 Ga0453684_0001598
517 Ga0453684_0183588
518 Ga0453684_0210562
519 Ga0453684_0372897
520 Ga0453684_0433902
521 Ga0453684_1221828
522 Ga0466970_0004196
523 Ga0466970_0197862
524 Ga0466960_0051416
525 Ga0466960_0324693
526 Ga0466959_0018070
527 Ga0466959_0051624
528 Ga0466959_0136787
529 Ga0451576_0000034
530 Ga0451576_0069303
531 Ga0451576_0155721
532 Ga0451576_0454898
533 Ga0451576_0809734
534 Ga0466958_0341160
535 Ga0466967_0007046
536 Ga0466967_1016401
537 Ga0495627_000009
538 Ga0495627_024961
539 Ga0495591_000002
540 Ga0495638_0106550
541 Ga0495605_0000007
542 Ga0495605_0005366
543 Ga0495594_0103747
544 Ga0495607_0000045
545 Ga0495583_0000007
546 Ga0495610_0026211
547 Ga0495610_0233142
548 Ga0495620_0000014
549 Ga0495631_0133131
550 Ga0495632_0038208
551 Ga0495637_0013802
552 Ga0495637_0034998
553 Ga0495643_0187791
554 Ga0495648_0151100
555 Ga0495654_0004087
556 Ga0495609_0000004
557 Ga0495609_0163152
558 Ga0495597_0000023
559 Ga0495597_0080809
560 Ga0495633_0000135
561 Ga0495611_0001820
562 Ga0495625_0123207
563 Ga0495661_0000106
564 Ga0495670_0100060
565 Ga0495671_0010183
566 Ga0495589_0000966
567 Ga0495660_0001006
568 Ga0495660_0016907
569 Ga0495660_0088653
570 Ga0495683_0000004
571 Ga0495679_006593
572 Ga0495673_0005159
573 Ga0495673_0006578
574 Ga0495681_0123849
575 Ga0496122_0012130
576 Ga0496123_0043768
577 Ga0496123_0149060
578 Ga0496124_0000035
579 Ga0496124_0040811
580 Ga0496124_0073017
581 Ga0496125_0011521
582 Ga0495678_000014
583 nmdc:mga0k408_14038_c1
584 Ga0500583_0025554
585 Ga0500583_0131537
586 Ga0500641_0022399
587 Ga0500617_129818
588 Ga0500573_0164756
589 Ga0500588_0017082
590 2511824278
591 2599330971
592 2599399791
593 2599454491
594 2599502108
595 2599515666
596 2599522229
597 2599611141
598 2599770037
599 2599880712
600 2599887361
601 2599895044
602 2599898474
603 2599932834
604 2599942590
605 2599949763
606 2599953339
607 2599958933
608 2599968987
609 2599980244
610 2599982487
611 2599992217
612 2599994475
613 2599999320
614 2600006073
615 2600009444
616 2600017223
617 2600023410
618 2600028318
619 2600035681
620 2600044953
621 2600047157
622 2600052046
623 2600057083
624 2600064996
625 2600069736
626 2600077433
627 2600357233
628 2643870222
629 2644284752
630 2652546379
631 2671090966
632 2671124716
633 2677899704
634 2678263991
635 2738687837
636 2738806167
637 2738893527
638 2739263728
639 2745004447
640 2794597878
641 2808854801
642 2808925156
643 2808935004
644 2808943508
645 2808947238
646 2808963401
647 2808980310
648 2808996031
649 2808998194
650 2825657230
651 2826582076
652 2842819437
653 2842852412
654 2842859925
655 2852613906
656 2852668358
657 2860869957
658 2913039168
659 2919485183
660 2923586680
661 2929146444
662 2929191941
663 2931369884
664 2931395663
665 2945933656
666 2947237162
667 2988729557
668 3007422446
669 3007869822
670 8054290903
671 8056134614
672 8056145463
673 8056154044
674 8056166217

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01584

CheW

CheW-like domain

29

170

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qdl-assembly2.cif.gz_B crystal structure of scaffolding protein ttchew from thermoanaerobacter tengcongensis 0.8913 17 161
4jpb-assembly1.cif.gz_W the structure of a ternary complex between chea domains p4 and p5 with chew and with an unzipped fragment of tm14, a chemoreceptor analog from thermotoga maritima. 0.8778 17 163
8c5v-assembly1.cif.gz_H chemotaxis core signalling unit from e protein lysed e. coli cells 0.8718 18 162
4jpb-assembly1.cif.gz_W the structure of a ternary complex between chea domains p4 and p5 with chew and with an unzipped fragment of tm14, a chemoreceptor analog from thermotoga maritima. 0.8546 17 163
2ch4-assembly1.cif.gz_A complex between bacterial chemotaxis histidine kinase chea domains p4 and p5 and receptor-adaptor protein chew 0.8539 17 153
ID Description Score Start End Superfamily
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.8765 38 105 2.40.50.180
2qdlB02 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.8757 38 109 2.40.50.180
af_P0A964_36_100_2.40.50.180 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);CheA-289, Domain 4 0.8392 38 105 2.40.50.180
2qdlB01 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8315 18 151 2.30.30.40
2ch4A02 Mainly Beta;Roll;SH3 type barrels.;SH3 Domains 0.8248 16 153 2.30.30.40
ID Description Score Start End GO Terms
AF-A0A4Q3QVD3-F1-model_v4 deleted 0.9471 21 158
AF-A0A1F9PT43-F1-model_v4 CheW-like domain-containing protein 0.9466 16 168 GO:0005829
GO:0006935
GO:0007165
AF-A0A812FER3-F1-model_v4 deleted 0.9407 16 167
AF-A0A657BAE8-F1-model_v4 Chemotaxis protein CheW 0.9365 18 152 GO:0005829
GO:0006935
GO:0007165
AF-A0A2S6QWR5-F1-model_v4 Chemotaxis protein CheW 0.9323 16 168 GO:0005829
GO:0006935
GO:0007165

Map