F413273

General Info

Members Datasets Scaffolds Average Seq Length
337 166 674 962

Family's Representative Sequence

Representative Sequence 3300050493|nmdc:mga0k408_228_c1|nmdc:mga0k408_228_c1_13188_16325
Length 1045
Sequence MSGYQPRSSRKKSYRPPPRDVEPDGQPVIAANKRLEESSLLEVGWYRPQVRVPTVRRDDFYIKEEKMKFKQGTRRKAIEYEKDLVKYWKKNGTFQKSVEKRAKSNSYVFYDGPPFVTGVPHHGTLLTSVVKDVVARYWTMQGKRVERVWGWDCHGLPAEVFTEKKLGITDKRDVGTKISLEEYIKTCRENMVQTGSLWEDTIDRIGRWVDFRGAYKTMDKEYMESVWWAFKELYEKGKIYEGEKVLLYCVRDATPISKAEVAMDNSYQDVTDPSVFVKFKLKDEDTVLLAWTTTPWTLPANTAVAVNQQFDYVEVKLEDGQKFVLAKELVPKVLTDEKHQPLKYTVERTLKGSELVGKEYDPLFESRGKKAHRVWHADYVSVENGSGIVHLAPAYGEEDFQLAKEKGFPTVSNIDDNGFYDSGEWKSQYVWDANKPIAKTLHERGAIWKIDYITHSYPHCHRCGTKLMYRAHPSWFMDIEGQRKEMLEQNGAINWFPEHIKNGRSAKTIETAPDWNMSRDRFWATAMPVWKGVDKKGREHIKVVGSYAELKELSGRELDDYHRPWIDNVTFEIDGVSYKRIEKVLDCWFESGSMPFAQFHYPFENVEKFEQNFPGDFIVEYVPQVRAWFYYMQAVSVGLFGTKAFSNALVHGTIAGNDGRKMSKSYGNYTDPNELMDQYSADSLRYLFLQSPLLNGDDYALVDKDVADIARKLSMVWNMYDFFTMYADVDGWEWDGKLDDPSEGLKNPLDQWIVSRLHQLIHEVESHMNKYDLPNATKPILPFIDDASNWYVRRSRRRFWKSGDDTDKNDAYRTLHYVLVQLAHVMAPFTPFLAEELYIKLTGGGSVHLRDWPKAGHINELELHCMGFVREVINEGLSQRASASGQTGTYKVRQPLQSVTIYDPKGLLRDDLKGVVAEELNVKDVNVQSEKIVLSKVVKGVTVQTFAPLLELDLKITPTLKREGMMREVVRNIQSARKKAGLNVDDRIKLSLSTSDEQLREAMHEHLQTIQDETLAKQIVFDQSFEYESSCSVDDAPLTIALEKA

Samples

Sample ID Description Type Environment
1 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
57 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
58 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
100 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
101 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
102 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
103 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
104 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
105 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
106 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
107 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
116 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
117 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
118 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
119 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
120 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
123 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
124 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
125 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
126 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
127 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
141 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
142 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
143 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
144 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
145 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
146 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
147 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
148 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
149 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
150 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
151 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
152 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
153 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
154 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
155 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
156 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
157 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
158 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
159 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
160 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
163 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
166 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27
Nodule 0
Rhizoplane 0.3
Rhizosphere 71.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0k408_228_c1 3300050493 Bacteria 30103
2 JGI24741J21665_1001902 3300001915 Bacteria 5650
3 JGI24740J21852_10001565 3300001979 Bacteria 10510
4 JGI24740J21852_10003792 3300001979 Bacteria 6579
5 JGI24739J22299_10000292 3300001989 Bacteria 16868
6 JGI24737J22298_10000055 3300001990 Bacteria 33719
7 JGI24737J22298_10000563 3300001990 Bacteria 13005
8 JGI24735J21928_10000047 3300002067 Bacteria 51438
9 JGI24735J21928_10000077 3300002067 Bacteria 39575
10 JGI24738J21930_10000094 3300002075 Bacteria 20140
11 rootH1_10023981 3300003316 Bacteria 29521
12 rootH2_10000244 3300003320 Bacteria 697651
13 rootH2_10000659 3300003320 Bacteria 146718
14 rootH1_10058345 3300003323 Bacteria 42716
15 Ga0070658_10000035 3300005327 Bacteria 145828
16 Ga0070658_10000036 3300005327 Bacteria 143743
17 Ga0070658_10000358 3300005327 Bacteria 39704
18 Ga0070658_10000410 3300005327 Bacteria 37214
19 Ga0070658_10000667 3300005327 Bacteria 29718
20 Ga0070658_10016877 3300005327 Bacteria 5844
21 Ga0070658_10046852 3300005327 Bacteria 3498
22 Ga0070683_100000092 3300005329 Bacteria 59204
23 Ga0070683_100001532 3300005329 Bacteria 17886
24 Ga0070670_100037808 3300005331 Bacteria 4152
25 Ga0070682_100001672 3300005337 Bacteria 12342
26 Ga0070660_100000185 3300005339 Bacteria 41480
27 Ga0070660_100000215 3300005339 Bacteria 38482
28 Ga0070691_10000191 3300005341 Bacteria 20497
29 Ga0070661_100002989 3300005344 Bacteria 11652
30 Ga0070661_100006793 3300005344 Bacteria 7887
31 Ga0070671_100000001 3300005355 Bacteria 1228151
32 Ga0070659_100000829 3300005366 Bacteria 22537
33 Ga0070659_100003405 3300005366 Bacteria 11331
34 Ga0070659_100011620 3300005366 Bacteria 6516
35 Ga0070667_100000001 3300005367 Bacteria 1108638
36 Ga0070714_100000272 3300005435 Bacteria 39469
37 Ga0070662_100000332 3300005457 Bacteria 28364
38 Ga0070681_10005666 3300005458 Bacteria 12074
39 Ga0070685_10014395 3300005466 Bacteria 4190
40 Ga0070679_100001496 3300005530 Bacteria 20756
41 Ga0070679_100040242 3300005530 Bacteria 4650
42 Ga0070684_100000573 3300005535 Bacteria 25415
43 Ga0070684_100001935 3300005535 Bacteria 15200
44 Ga0068855_100000138 3300005563 Bacteria 92676
45 Ga0068855_100000364 3300005563 Bacteria 56128
46 Ga0068855_100001067 3300005563 Bacteria 34001
47 Ga0068855_100001640 3300005563 Bacteria 28036
48 Ga0068855_100016369 3300005563 Bacteria 8916
49 Ga0068855_100027838 3300005563 Bacteria 6761
50 Ga0070664_100004771 3300005564 Bacteria 10860
51 Ga0068857_100000040 3300005577 Bacteria 70513
52 Ga0068857_100000084 3300005577 Bacteria 54402
53 Ga0068857_100019044 3300005577 Bacteria 6024
54 Ga0068857_100020835 3300005577 Bacteria 5767
55 Ga0068856_100000608 3300005614 Bacteria 39195
56 Ga0068856_100000968 3300005614 Bacteria 30626
57 Ga0068856_100004168 3300005614 Bacteria 14441
58 Ga0068856_100004401 3300005614 Bacteria 14039
59 Ga0068856_100005421 3300005614 Bacteria 12569
60 Ga0068852_100000044 3300005616 Bacteria 89653
61 Ga0068852_100000051 3300005616 Bacteria 81538
62 Ga0068858_100012766 3300005842 Bacteria 7917
63 Ga0068860_100007156 3300005843 Bacteria 11163
64 Ga0081455_10000006 3300005937 Bacteria 323066
65 Ga0081455_10000465 3300005937 Bacteria 52932
66 Ga0075365_10000034 3300006038 Bacteria 51086
67 Ga0075365_10000066 3300006038 Bacteria 31412
68 Ga0075365_10004826 3300006038 Bacteria 7195
69 Ga0075365_10025497 3300006038 Bacteria 3743
70 Ga0075368_10000093 3300006042 Bacteria 22692
71 Ga0075368_10000928 3300006042 Bacteria 9117
72 Ga0075364_10000539 3300006051 Bacteria 19327
73 Ga0075364_10024647 3300006051 Bacteria 3822
74 Ga0075364_10025012 3300006051 Bacteria 3798
75 Ga0075362_10000051 3300006177 Bacteria 38655
76 Ga0075367_10000011 3300006178 Bacteria 43060
77 Ga0075367_10000043 3300006178 Bacteria 28376
78 Ga0075367_10000113 3300006178 Bacteria 23085
79 Ga0075369_10000021 3300006186 Bacteria 44895
80 Ga0075369_10000973 3300006186 Bacteria 9541
81 Ga0075366_10000287 3300006195 Bacteria 22585
82 Ga0075366_10000354 3300006195 Bacteria 21047
83 Ga0075366_10000441 3300006195 Bacteria 19384
84 Ga0075366_10005393 3300006195 Bacteria 6929
85 Ga0097621_100000213 3300006237 Bacteria 38241
86 Ga0097621_100041749 3300006237 Bacteria 3694
87 Ga0075370_10002673 3300006353 Bacteria 8333
88 Ga0075370_10022839 3300006353 Bacteria 3440
89 Ga0068871_100000980 3300006358 Bacteria 19120
90 Ga0068871_100006013 3300006358 Bacteria 8543
91 Ga0075428_100002851 3300006844 Bacteria 18864
92 Ga0068865_100007011 3300006881 Bacteria 6915
93 Ga0105240_10000003 3300009093 Bacteria 1183681
94 Ga0105240_10000004 3300009093 Bacteria 708156
95 Ga0105240_10002095 3300009093 Bacteria 32628
96 Ga0105240_10004061 3300009093 Bacteria 22519
97 Ga0105240_10017940 3300009093 Bacteria 9519
98 Ga0111539_10003243 3300009094 Bacteria 21511
99 Ga0105245_10000001 3300009098 Bacteria 939270
100 Ga0105245_10000002 3300009098 Bacteria 634374
101 Ga0105245_10000093 3300009098 Bacteria 86866
102 Ga0105245_10001458 3300009098 Bacteria 21392
103 Ga0105243_10000001 3300009148 Bacteria 1156578
104 Ga0105241_10000007 3300009174 Bacteria 343524
105 Ga0105241_10000917 3300009174 Bacteria 22309
106 Ga0105242_10000002 3300009176 Bacteria 262559
107 Ga0105237_10000002 3300009545 Bacteria 702357
108 Ga0105237_10000488 3300009545 Bacteria 56363
109 Ga0105238_10020843 3300009551 Bacteria 6677
110 Ga0105238_10075032 3300009551 Bacteria 3374
111 Ga0105249_10000502 3300009553 Bacteria 36164
112 Ga0105032_100003 3300009979 Bacteria 186985
113 Ga0105032_100022 3300009979 Bacteria 40670
114 Ga0105029_100116 3300009984 Bacteria 3913
115 Ga0105028_100199 3300009993 Bacteria 6615
116 Ga0105028_100204 3300009993 Bacteria 6524
117 Ga0105239_10012001 3300010375 Bacteria 9661
118 Ga0105239_10013239 3300010375 Bacteria 9168
119 Ga0105246_10000672 3300011119 Bacteria 19205
120 Ga0105246_10003987 3300011119 Bacteria 8953
121 Ga0105246_10004857 3300011119 Bacteria 8191
122 Ga0157373_10000096 3300013100 Bacteria 72510
123 Ga0157373_10014285 3300013100 Bacteria 5824
124 Ga0157371_10001301 3300013102 Bacteria 26246
125 Ga0157371_10009164 3300013102 Bacteria 7816
126 Ga0157370_10000259 3300013104 Bacteria 67045
127 Ga0157370_10000706 3300013104 Bacteria 41789
128 Ga0157370_10003475 3300013104 Bacteria 18492
129 Ga0157369_10000024 3300013105 Bacteria 225851
130 Ga0157369_10000177 3300013105 Bacteria 89168
131 Ga0157369_10001762 3300013105 Bacteria 26232
132 Ga0157369_10002122 3300013105 Bacteria 23910
133 Ga0157374_10000018 3300013296 Bacteria 286683
134 Ga0157374_10000960 3300013296 Bacteria 25007
135 Ga0157374_10001055 3300013296 Bacteria 23950
136 Ga0157374_10009266 3300013296 Bacteria 8440
137 Ga0157374_10034747 3300013296 Bacteria 4607
138 Ga0157378_10004005 3300013297 Bacteria 13017
139 Ga0157372_10000002 3300013307 Bacteria 687862
140 Ga0157372_10000008 3300013307 Bacteria 305449
141 Ga0157372_10000356 3300013307 Bacteria 50272
142 Ga0163163_10000969 3300014325 Bacteria 24389
143 Ga0163163_10036605 3300014325 Bacteria 4769
144 Ga0157377_10000376 3300014745 Bacteria 19677
145 Ga0157376_10000007 3300014969 Bacteria 368004
146 Ga0157376_10000205 3300014969 Bacteria 40924
147 Ga0157376_10013767 3300014969 Bacteria 6047
148 Ga0207647_10002691 3300025904 Bacteria 13414
149 Ga0207647_10008895 3300025904 Bacteria 7161
150 Ga0207705_10000010 3300025909 Bacteria 518023
151 Ga0207705_10000011 3300025909 Bacteria 517768
152 Ga0207705_10000104 3300025909 Bacteria 96668
153 Ga0207705_10000136 3300025909 Bacteria 79294
154 Ga0207705_10005323 3300025909 Bacteria 9625
155 Ga0207654_10000002 3300025911 Bacteria 1460142
156 Ga0207654_10000905 3300025911 Bacteria 16385
157 Ga0207695_10000005 3300025913 Bacteria 1196715
158 Ga0207695_10000009 3300025913 Bacteria 1034276
159 Ga0207695_10001907 3300025913 Bacteria 32545
160 Ga0207695_10005545 3300025913 Bacteria 16689
161 Ga0207671_10000003 3300025914 Bacteria 1065461
162 Ga0207671_10000008 3300025914 Bacteria 798229
163 Ga0207657_10001512 3300025919 Bacteria 24893
164 Ga0207657_10002166 3300025919 Bacteria 21283
165 Ga0207657_10002237 3300025919 Bacteria 20989
166 Ga0207657_10018032 3300025919 Bacteria 6753
167 Ga0207657_10024038 3300025919 Bacteria 5657
168 Ga0207649_10003692 3300025920 Bacteria 8354
169 Ga0207652_10000744 3300025921 Bacteria 31398
170 Ga0207652_10004412 3300025921 Bacteria 11463
171 Ga0207652_10019604 3300025921 Bacteria 5566
172 Ga0207694_10017168 3300025924 Bacteria 5468
173 Ga0207694_10052464 3300025924 Bacteria 3161
174 Ga0207687_10000001 3300025927 Bacteria 1130810
175 Ga0207687_10000004 3300025927 Bacteria 841177
176 Ga0207687_10000008 3300025927 Bacteria 497738
177 Ga0207687_10000127 3300025927 Bacteria 51055
178 Ga0207687_10003763 3300025927 Bacteria 10195
179 Ga0207664_10000578 3300025929 Bacteria 25609
180 Ga0207644_10000001 3300025931 Bacteria 1243214
181 Ga0207690_10003737 3300025932 Bacteria 9035
182 Ga0207706_10000053 3300025933 Bacteria 114286
183 Ga0207686_10000001 3300025934 Bacteria 1169580
184 Ga0207686_10001252 3300025934 Bacteria 14690
185 Ga0207709_10000002 3300025935 Bacteria 1171536
186 Ga0207704_10000232 3300025938 Bacteria 27521
187 Ga0207661_10000083 3300025944 Bacteria 66112
188 Ga0207661_10021283 3300025944 Bacteria 4858
189 Ga0207679_10000193 3300025945 Bacteria 49103
190 Ga0207667_10000005 3300025949 Bacteria 715503
191 Ga0207667_10000008 3300025949 Bacteria 625138
192 Ga0207667_10000434 3300025949 Bacteria 56114
193 Ga0207667_10002335 3300025949 Bacteria 23759
194 Ga0207667_10005766 3300025949 Bacteria 15108
195 Ga0207667_10014564 3300025949 Bacteria 8957
196 Ga0207667_10018771 3300025949 Bacteria 7743
197 Ga0207712_10000982 3300025961 Bacteria 20433
198 Ga0207658_10000003 3300025986 Bacteria 1151934
199 Ga0207658_10003334 3300025986 Bacteria 11401
200 Ga0207639_10002872 3300026041 Bacteria 11570
201 Ga0207702_10000190 3300026078 Bacteria 73848
202 Ga0207702_10000527 3300026078 Bacteria 42758
203 Ga0207702_10001522 3300026078 Bacteria 22932
204 Ga0207702_10005986 3300026078 Bacteria 10561
205 Ga0207674_10000001 3300026116 Bacteria 616581
206 Ga0207674_10002117 3300026116 Bacteria 25105
207 Ga0207698_10000022 3300026142 Bacteria 131985
208 Ga0207698_10000073 3300026142 Bacteria 67094
209 Ga0209813_10000002 3300027866 Bacteria 215993
210 Ga0268266_10000652 3300028379 Bacteria 46990
211 Ga0265334_10000028 3300028573 Bacteria 115200
212 Ga0265334_10000045 3300028573 Bacteria 93663
213 Ga0265338_10000003 3300028800 Bacteria 733923
214 Ga0265338_10000195 3300028800 Bacteria 114621
215 Ga0265338_10000323 3300028800 Bacteria 87009
216 Ga0265338_10000412 3300028800 Bacteria 76488
217 Ga0265338_10000905 3300028800 Bacteria 49902
218 Ga0316179_1024327 3300030734 Bacteria 28090
219 Ga0316183_1003180 3300030742 Bacteria 30203
220 Ga0316183_1090400 3300030742 Bacteria 3282
221 Ga0316181_1063761 3300030744 Bacteria 284591
222 Ga0316182_1030052 3300030745 Bacteria 42417
223 Ga0316182_1043034 3300030745 Bacteria 6017
224 Ga0265340_10000065 3300031247 Bacteria 49264
225 Ga0265327_10000892 3300031251 Bacteria 44042
226 Ga0265327_10001541 3300031251 Bacteria 28417
227 Ga0265313_10007228 3300031595 Bacteria 7640
228 Ga0307516_10007528 3300031730 Bacteria 12507
229 Ga0307406_10000002 3300031901 Bacteria 255753
230 Ga0307406_10000079 3300031901 Bacteria 53858
231 Ga0395899_0001513 3300037312 Bacteria 19701
232 Ga0395900_0000001 3300037418 Bacteria 931146
233 Ga0395900_0000815 3300037418 Bacteria 41253
234 Ga0395900_0003721 3300037418 Bacteria 16388
235 Ga0395900_0008907 3300037418 Bacteria 10297
236 Ga0395900_0025042 3300037418 Bacteria 6108
237 Ga0395898_0000002 3300037466 Bacteria 931013
238 Ga0395898_0001854 3300037466 Bacteria 27100
239 Ga0395898_0020660 3300037466 Bacteria 6686
240 Ga0395898_0021693 3300037466 Bacteria 6510
241 Ga0395905_0000682 3300037471 Bacteria 45023
242 Ga0395905_0003559 3300037471 Bacteria 16594
243 Ga0395905_0093139 3300037471 Bacteria 2826
244 Ga0395901_0000006 3300038443 Bacteria 514112
245 Ga0395901_0001034 3300038443 Bacteria 30150
246 Ga0395901_0027286 3300038443 Bacteria 5866
247 Ga0439432_000695 3300042006 Bacteria 12583
248 Ga0439446_0000005 3300042156 Bacteria 101649
249 Ga0439434_0003924 3300042435 Bacteria 4343
250 Ga0439464_0000002 3300042439 Bacteria 79371
251 Ga0466965_0001254 3300044683 Bacteria 10068
252 Ga0453684_0000664 3300044712 Bacteria 123305
253 Ga0495638_0000119 3300046460 Bacteria 127603
254 Ga0495638_0006225 3300046460 Bacteria 8711
255 Ga0495588_0000173 3300046674 Bacteria 81355
256 Ga0495649_0000057 3300046694 Bacteria 99739
257 Ga0495660_0000035 3300046810 Bacteria 199140
258 Ga0495672_0000016 3300047320 Bacteria 500601
259 Ga0495686_0008019 3300047472 Bacteria 7829
260 Ga0496115_0000049 3300048918 Bacteria 109919
261 Ga0501034_0000371 3300049571 Bacteria 76470
262 Ga0501034_0000942 3300049571 Bacteria 42231
263 Ga0501034_0001302 3300049571 Bacteria 33740
264 Ga0501034_0015118 3300049571 Bacteria 7933
265 Ga0501036_0033258 3300049572 Bacteria 4361
266 Ga0501037_0000001 3300049573 Bacteria 753276
267 Ga0501047_0000119 3300049581 Bacteria 96051
268 Ga0501035_0000211 3300049822 Bacteria 69883
269 nmdc:mga03683_50_c1 3300050489 Bacteria 42495
270 nmdc:mga00v17_1097_c3 3300050491 Bacteria 8955
271 nmdc:mga00v17_152_c1 3300050491 Bacteria 40251
272 nmdc:mga00v17_5184_c1 3300050491 Bacteria 6855
273 nmdc:mga0yw44_12324_c1 3300050492 Bacteria 4451
274 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
275 nmdc:mga0yw44_21646_c1 3300050492 Bacteria 3591
276 nmdc:mga0yw44_31_c1 3300050492 Bacteria 51752
277 nmdc:mga0yw44_6_c1 3300050492 Bacteria 272478
278 nmdc:mga0yw44_93_c1 3300050492 Bacteria 31138
279 nmdc:mga0k408_419_c1 3300050493 Bacteria 2973
280 nmdc:mga0k408_4224_c1 3300050493 Bacteria 7619
281 nmdc:mga0k408_4359_c1 3300050493 Bacteria 6979
282 nmdc:mga0k408_58_c2 3300050493 Bacteria 26931
283 nmdc:mga0k408_590_c1 3300050493 Bacteria 20045
284 nmdc:mga06z11_10_c1 3300050494 Bacteria 105982
285 nmdc:mga06z11_137_c1 3300050494 Bacteria 29063
286 nmdc:mga06z11_2179_c1 3300050494 Bacteria 7439
287 nmdc:mga04h51_2_c1 3300050495 Bacteria 215993
288 nmdc:mga07m45_34321_c1 3300050496 Bacteria 2820
289 nmdc:mga07m45_4918_c4 3300050496 Bacteria 4425
290 nmdc:mga07m45_8064_c1 3300050496 Bacteria 5399
291 nmdc:mga08y16_1247_c1 3300050511 Bacteria 25239
292 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
293 Ga0500610_0000009 3300053079 Bacteria 105876
294 Ga0500643_000010 3300053087 Bacteria 408084
295 Ga0500643_000011 3300053087 Bacteria 385630
296 Ga0500643_000428 3300053087 Bacteria 31998
297 Ga0500643_014385 3300053087 Bacteria 2754
298 Ga0500644_0000173 3300053088 Bacteria 41225
299 Ga0500644_0002192 3300053088 Bacteria 4931
300 Ga0500646_0000001 3300053090 Bacteria 273936
301 Ga0500646_0000588 3300053090 Bacteria 10464
302 Ga0500583_0000140 3300053092 Bacteria 30524
303 Ga0500583_0000146 3300053092 Bacteria 30082
304 Ga0500583_0007659 3300053092 Bacteria 3817
305 Ga0500651_0000019 3300053093 Bacteria 141974
306 Ga0500651_0000051 3300053093 Bacteria 76584
307 Ga0500651_0006634 3300053093 Bacteria 6695
308 Ga0500641_0000001 3300053096 Bacteria 1115973
309 Ga0500650_0000003 3300053098 Bacteria 164144
310 Ga0500650_0003622 3300053098 Bacteria 5428
311 Ga0500555_000001 3300053103 Bacteria 1353713
312 Ga0500555_000002 3300053103 Bacteria 1314346
313 Ga0500555_000005 3300053103 Bacteria 342334
314 Ga0500556_0000196 3300053104 Bacteria 49648
315 Ga0500562_000002 3300053108 Bacteria 977234
316 Ga0500569_000002 3300053109 Bacteria 127605
317 Ga0500593_000001 3300053117 Bacteria 784404
318 Ga0500594_0000001 3300053118 Bacteria 1178472
319 Ga0500594_0000024 3300053118 Bacteria 52779
320 Ga0500594_0000086 3300053118 Bacteria 28032
321 Ga0500614_000001 3300053123 Bacteria 1274484
322 Ga0500628_000005 3300053129 Bacteria 201423
323 Ga0500642_0001624 3300053130 Bacteria 6487
324 Ga0500652_000001 3300053131 Bacteria 946868
325 Ga0500652_000012 3300053131 Bacteria 155076
326 Ga0500655_000935 3300053133 Bacteria 5649
327 Ga0500655_001162 3300053133 Bacteria 5022
328 Ga0500561_0000001 3300053137 Bacteria 957685
329 Ga0500568_0011068 3300053139 Bacteria 4202
330 Ga0500579_005370 3300053143 Bacteria 7868
331 Ga0500589_000002 3300053147 Bacteria 245055
332 Ga0500616_0000005 3300053153 Bacteria 961725
333 Ga0500616_0000067 3300053153 Bacteria 236311
334 Ga0500616_0012340 3300053153 Bacteria 5003
335 Ga0500649_000009 3300053722 Bacteria 94696
336 Ga0500570_000055 3300053724 Bacteria 28288
337 Ga0500570_000235 3300053724 Bacteria 18376
338 nmdc:mga0k408_228_c1
339 JGI24741J21665_1001902
340 JGI24740J21852_10001565
341 JGI24740J21852_10003792
342 JGI24739J22299_10000292
343 JGI24737J22298_10000055
344 JGI24737J22298_10000563
345 JGI24735J21928_10000047
346 JGI24735J21928_10000077
347 JGI24738J21930_10000094
348 rootH1_10023981
349 rootH2_10000244
350 rootH2_10000659
351 rootH1_10058345
352 Ga0070658_10000035
353 Ga0070658_10000036
354 Ga0070658_10000358
355 Ga0070658_10000410
356 Ga0070658_10000667
357 Ga0070658_10016877
358 Ga0070658_10046852
359 Ga0070683_100000092
360 Ga0070683_100001532
361 Ga0070670_100037808
362 Ga0070682_100001672
363 Ga0070660_100000185
364 Ga0070660_100000215
365 Ga0070691_10000191
366 Ga0070661_100002989
367 Ga0070661_100006793
368 Ga0070671_100000001
369 Ga0070659_100000829
370 Ga0070659_100003405
371 Ga0070659_100011620
372 Ga0070667_100000001
373 Ga0070714_100000272
374 Ga0070662_100000332
375 Ga0070681_10005666
376 Ga0070685_10014395
377 Ga0070679_100001496
378 Ga0070679_100040242
379 Ga0070684_100000573
380 Ga0070684_100001935
381 Ga0068855_100000138
382 Ga0068855_100000364
383 Ga0068855_100001067
384 Ga0068855_100001640
385 Ga0068855_100016369
386 Ga0068855_100027838
387 Ga0070664_100004771
388 Ga0068857_100000040
389 Ga0068857_100000084
390 Ga0068857_100019044
391 Ga0068857_100020835
392 Ga0068856_100000608
393 Ga0068856_100000968
394 Ga0068856_100004168
395 Ga0068856_100004401
396 Ga0068856_100005421
397 Ga0068852_100000044
398 Ga0068852_100000051
399 Ga0068858_100012766
400 Ga0068860_100007156
401 Ga0081455_10000006
402 Ga0081455_10000465
403 Ga0075365_10000034
404 Ga0075365_10000066
405 Ga0075365_10004826
406 Ga0075365_10025497
407 Ga0075368_10000093
408 Ga0075368_10000928
409 Ga0075364_10000539
410 Ga0075364_10024647
411 Ga0075364_10025012
412 Ga0075362_10000051
413 Ga0075367_10000011
414 Ga0075367_10000043
415 Ga0075367_10000113
416 Ga0075369_10000021
417 Ga0075369_10000973
418 Ga0075366_10000287
419 Ga0075366_10000354
420 Ga0075366_10000441
421 Ga0075366_10005393
422 Ga0097621_100000213
423 Ga0097621_100041749
424 Ga0075370_10002673
425 Ga0075370_10022839
426 Ga0068871_100000980
427 Ga0068871_100006013
428 Ga0075428_100002851
429 Ga0068865_100007011
430 Ga0105240_10000003
431 Ga0105240_10000004
432 Ga0105240_10002095
433 Ga0105240_10004061
434 Ga0105240_10017940
435 Ga0111539_10003243
436 Ga0105245_10000001
437 Ga0105245_10000002
438 Ga0105245_10000093
439 Ga0105245_10001458
440 Ga0105243_10000001
441 Ga0105241_10000007
442 Ga0105241_10000917
443 Ga0105242_10000002
444 Ga0105237_10000002
445 Ga0105237_10000488
446 Ga0105238_10020843
447 Ga0105238_10075032
448 Ga0105249_10000502
449 Ga0105032_100003
450 Ga0105032_100022
451 Ga0105029_100116
452 Ga0105028_100199
453 Ga0105028_100204
454 Ga0105239_10012001
455 Ga0105239_10013239
456 Ga0105246_10000672
457 Ga0105246_10003987
458 Ga0105246_10004857
459 Ga0157373_10000096
460 Ga0157373_10014285
461 Ga0157371_10001301
462 Ga0157371_10009164
463 Ga0157370_10000259
464 Ga0157370_10000706
465 Ga0157370_10003475
466 Ga0157369_10000024
467 Ga0157369_10000177
468 Ga0157369_10001762
469 Ga0157369_10002122
470 Ga0157374_10000018
471 Ga0157374_10000960
472 Ga0157374_10001055
473 Ga0157374_10009266
474 Ga0157374_10034747
475 Ga0157378_10004005
476 Ga0157372_10000002
477 Ga0157372_10000008
478 Ga0157372_10000356
479 Ga0163163_10000969
480 Ga0163163_10036605
481 Ga0157377_10000376
482 Ga0157376_10000007
483 Ga0157376_10000205
484 Ga0157376_10013767
485 Ga0207647_10002691
486 Ga0207647_10008895
487 Ga0207705_10000010
488 Ga0207705_10000011
489 Ga0207705_10000104
490 Ga0207705_10000136
491 Ga0207705_10005323
492 Ga0207654_10000002
493 Ga0207654_10000905
494 Ga0207695_10000005
495 Ga0207695_10000009
496 Ga0207695_10001907
497 Ga0207695_10005545
498 Ga0207671_10000003
499 Ga0207671_10000008
500 Ga0207657_10001512
501 Ga0207657_10002166
502 Ga0207657_10002237
503 Ga0207657_10018032
504 Ga0207657_10024038
505 Ga0207649_10003692
506 Ga0207652_10000744
507 Ga0207652_10004412
508 Ga0207652_10019604
509 Ga0207694_10017168
510 Ga0207694_10052464
511 Ga0207687_10000001
512 Ga0207687_10000004
513 Ga0207687_10000008
514 Ga0207687_10000127
515 Ga0207687_10003763
516 Ga0207664_10000578
517 Ga0207644_10000001
518 Ga0207690_10003737
519 Ga0207706_10000053
520 Ga0207686_10000001
521 Ga0207686_10001252
522 Ga0207709_10000002
523 Ga0207704_10000232
524 Ga0207661_10000083
525 Ga0207661_10021283
526 Ga0207679_10000193
527 Ga0207667_10000005
528 Ga0207667_10000008
529 Ga0207667_10000434
530 Ga0207667_10002335
531 Ga0207667_10005766
532 Ga0207667_10014564
533 Ga0207667_10018771
534 Ga0207712_10000982
535 Ga0207658_10000003
536 Ga0207658_10003334
537 Ga0207639_10002872
538 Ga0207702_10000190
539 Ga0207702_10000527
540 Ga0207702_10001522
541 Ga0207702_10005986
542 Ga0207674_10000001
543 Ga0207674_10002117
544 Ga0207698_10000022
545 Ga0207698_10000073
546 Ga0209813_10000002
547 Ga0268266_10000652
548 Ga0265334_10000028
549 Ga0265334_10000045
550 Ga0265338_10000003
551 Ga0265338_10000195
552 Ga0265338_10000323
553 Ga0265338_10000412
554 Ga0265338_10000905
555 Ga0316179_1024327
556 Ga0316183_1003180
557 Ga0316183_1090400
558 Ga0316181_1063761
559 Ga0316182_1030052
560 Ga0316182_1043034
561 Ga0265340_10000065
562 Ga0265327_10000892
563 Ga0265327_10001541
564 Ga0265313_10007228
565 Ga0307516_10007528
566 Ga0307406_10000002
567 Ga0307406_10000079
568 Ga0395899_0001513
569 Ga0395900_0000001
570 Ga0395900_0000815
571 Ga0395900_0003721
572 Ga0395900_0008907
573 Ga0395900_0025042
574 Ga0395898_0000002
575 Ga0395898_0001854
576 Ga0395898_0020660
577 Ga0395898_0021693
578 Ga0395905_0000682
579 Ga0395905_0003559
580 Ga0395905_0093139
581 Ga0395901_0000006
582 Ga0395901_0001034
583 Ga0395901_0027286
584 Ga0439432_000695
585 Ga0439446_0000005
586 Ga0439434_0003924
587 Ga0439464_0000002
588 Ga0466965_0001254
589 Ga0453684_0000664
590 Ga0495638_0000119
591 Ga0495638_0006225
592 Ga0495588_0000173
593 Ga0495649_0000057
594 Ga0495660_0000035
595 Ga0495672_0000016
596 Ga0495686_0008019
597 Ga0496115_0000049
598 Ga0501034_0000371
599 Ga0501034_0000942
600 Ga0501034_0001302
601 Ga0501034_0015118
602 Ga0501036_0033258
603 Ga0501037_0000001
604 Ga0501047_0000119
605 Ga0501035_0000211
606 nmdc:mga03683_50_c1
607 nmdc:mga00v17_1097_c3
608 nmdc:mga00v17_152_c1
609 nmdc:mga00v17_5184_c1
610 nmdc:mga0yw44_12324_c1
611 nmdc:mga0yw44_13_c1
612 nmdc:mga0yw44_21646_c1
613 nmdc:mga0yw44_31_c1
614 nmdc:mga0yw44_6_c1
615 nmdc:mga0yw44_93_c1
616 nmdc:mga0k408_419_c1
617 nmdc:mga0k408_4224_c1
618 nmdc:mga0k408_4359_c1
619 nmdc:mga0k408_58_c2
620 nmdc:mga0k408_590_c1
621 nmdc:mga06z11_10_c1
622 nmdc:mga06z11_137_c1
623 nmdc:mga06z11_2179_c1
624 nmdc:mga04h51_2_c1
625 nmdc:mga07m45_34321_c1
626 nmdc:mga07m45_4918_c4
627 nmdc:mga07m45_8064_c1
628 nmdc:mga08y16_1247_c1
629 nmdc:mga0sz30_2_c1
630 Ga0500610_0000009
631 Ga0500643_000010
632 Ga0500643_000011
633 Ga0500643_000428
634 Ga0500643_014385
635 Ga0500644_0000173
636 Ga0500644_0002192
637 Ga0500646_0000001
638 Ga0500646_0000588
639 Ga0500583_0000140
640 Ga0500583_0000146
641 Ga0500583_0007659
642 Ga0500651_0000019
643 Ga0500651_0000051
644 Ga0500651_0006634
645 Ga0500641_0000001
646 Ga0500650_0000003
647 Ga0500650_0003622
648 Ga0500555_000001
649 Ga0500555_000002
650 Ga0500555_000005
651 Ga0500556_0000196
652 Ga0500562_000002
653 Ga0500569_000002
654 Ga0500593_000001
655 Ga0500594_0000001
656 Ga0500594_0000024
657 Ga0500594_0000086
658 Ga0500614_000001
659 Ga0500628_000005
660 Ga0500642_0001624
661 Ga0500652_000001
662 Ga0500652_000012
663 Ga0500655_000935
664 Ga0500655_001162
665 Ga0500561_0000001
666 Ga0500568_0011068
667 Ga0500579_005370
668 Ga0500589_000002
669 Ga0500616_0000005
670 Ga0500616_0000067
671 Ga0500616_0012340
672 Ga0500649_000009
673 Ga0500570_000055
674 Ga0500570_000235

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

83

699

0.96

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

750

886

0.87

PF19302

DUF5915

Domain of unknown function (DUF5915)

914

1045

0.82

PF13603

tRNA-synt_1_2

Leucyl-tRNA synthetase, editing domain

274

434

0.79

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

111

267

0.75

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

628

713

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jzs-assembly1.cif.gz_A isoleucyl-trna synthetase complexed with mupirocin 0.8892 3 803
1jzs-assembly1.cif.gz_A isoleucyl-trna synthetase complexed with mupirocin 0.8676 3 803
7wrs-assembly1.cif.gz_B crystal structure of the chicken isoleucyl-trna synthetase 1 (iars1) une-i complexed with glutamyl-trna synthetase 1 (ears1) 0.8657 880 963
7d5c-assembly1.cif.gz_A ilers in complex with a trna site inhibitor 0.8628 9 878
8c9d-assembly1.cif.gz_A priestia megaterium w130q mutant of type 2 isoleucyl-trna synthetase complexed with an isoleucyl-adenylate analogue 0.8456 3 964
ID Description Score Start End Superfamily
1jzqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9265 3 623 3.40.50.620
1jzqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9225 3 623 3.40.50.620
af_Q8IDZ9_87_292_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9103 6 198 3.40.50.620
af_I1LIK8_397_670_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9057 345 619 3.40.50.620
af_I1LIK8_397_670_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8995 345 619 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A3D5BXI8-F1-model_v4 Isoleucine--tRNA ligase (EC 6.1.1.5) 0.9459 1 764 GO:0000049
GO:0002161
GO:0004822
GO:0005524
GO:0005737
GO:0006428
AF-A0A382TZB6-F1-model_v4 Isoleucine--tRNA ligase 0.9229 470 763 GO:0000049
GO:0004822
GO:0005524
GO:0006428
AF-A0A537GLA3-F1-model_v4 Aminoacyl-tRNA synthetase class Ia domain-containing protein 0.9227 6 195 GO:0004822
GO:0005524
GO:0006428
AF-A0A3D5BXI8-F1-model_v4 Isoleucine--tRNA ligase (EC 6.1.1.5) 0.9222 1 764 GO:0000049
GO:0002161
GO:0004822
GO:0005524
GO:0005737
GO:0006428
AF-A0A4Q6BPJ8-F1-model_v4 Isoleucine--tRNA ligase 0.9202 7 176 GO:0004822
GO:0005524
GO:0006428

Map