F413275

General Info

Members Datasets Scaffolds Average Seq Length
337 203 674 318

Family's Representative Sequence

Representative Sequence 3300050509|nmdc:mga0qj67_163334_c1|nmdc:mga0qj67_163334_c1_140_1252
Length 370
Sequence MSTADDEIHDVLRSVARELLGKAPAPEWQDLADAGWLGLEVPEALDGAGATFAEVAVVLEEMGRAAAVGPYLGTAVLGVATLNLLAPNPGRDALLHLVAAGDRKVAVALATDDSGPWTCRPIEISRAQNQGGFRLEGGGLHGRVAFVPDAPGADRLLLPALDPAGEPVVAIVHTGDEAPAGLTITPQPVLDATRQLGEVTADGVEVPDAAVWRFAEEPERGMRELHDRAALAVACDSLGLSGAMLDATVAYAGVRHQFGRAIGSFQAVKHACADMLVQISVARELVGAAVRAVVADEDDAEASRTVAMAKSYACGAAVDVVGKALQLHGGIGYTWESGIHVHLKRAALNRSLFGSPLAHRRHLAERYRNE

Samples

Sample ID Description Type Environment
1 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
50 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
112 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
117 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
120 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
121 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
122 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
123 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
124 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
125 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
128 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
139 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
140 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
141 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
142 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
143 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
144 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
150 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
151 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
152 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
178 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
183 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
184 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
185 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
186 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
187 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
188 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
189 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
193 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
194 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
195 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
196 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
197 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
198 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
199 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
200 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
201 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
202 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
203 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.44
Metatranscriptomes 0
Isolates 3.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.39
Nodule 0.59
Rhizoplane 8.61
Rhizosphere 75.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0qj67_163334_c1 3300050509 Bacteria 1808
2 JGI24744J21845_10002379 3300002077 Bacteria 3836
3 Ga0055540_1000003 3300003792 Bacteria 428375
4 Ga0070676_10007583 3300005328 Bacteria 5828
5 Ga0070690_100001751 3300005330 Bacteria 11475
6 Ga0070670_100176937 3300005331 Bacteria 1852
7 Ga0070682_100004022 3300005337 Bacteria 8171
8 Ga0070682_100005542 3300005337 Bacteria 7029
9 Ga0070682_100052100 3300005337 Bacteria 2560
10 Ga0068868_100001850 3300005338 Bacteria 14534
11 Ga0068868_100295938 3300005338 Bacteria 1374
12 Ga0070691_10008999 3300005341 Bacteria 4568
13 Ga0070661_100078474 3300005344 Bacteria 2436
14 Ga0070668_100000498 3300005347 Bacteria 25961
15 Ga0070668_100026175 3300005347 Bacteria 4424
16 Ga0070668_100267027 3300005347 Bacteria 1425
17 Ga0070671_100049781 3300005355 Bacteria 3486
18 Ga0070671_100367887 3300005355 Bacteria 1228
19 Ga0070674_100005839 3300005356 Bacteria 7154
20 Ga0070674_100017055 3300005356 Bacteria 4559
21 Ga0070674_100039308 3300005356 Bacteria 3194
22 Ga0070688_100009804 3300005365 Bacteria 5263
23 Ga0070688_100213219 3300005365 Bacteria 1357
24 Ga0070659_100007076 3300005366 Bacteria 8131
25 Ga0070667_100001320 3300005367 Bacteria 22284
26 Ga0070667_100003272 3300005367 Bacteria 13841
27 Ga0070667_100056581 3300005367 Bacteria 3313
28 Ga0070667_100270468 3300005367 Bacteria 1523
29 Ga0070667_100307958 3300005367 Bacteria 1427
30 Ga0070667_100395552 3300005367 Bacteria 1257
31 Ga0070709_10036309 3300005434 Bacteria 3001
32 Ga0070714_100223998 3300005435 Bacteria 1730
33 Ga0070710_10000303 3300005437 Bacteria 23421
34 Ga0070710_10005481 3300005437 Bacteria 6032
35 Ga0070701_10000604 3300005438 Bacteria 12533
36 Ga0070711_100001503 3300005439 Bacteria 12819
37 Ga0070711_100033523 3300005439 Bacteria 3419
38 Ga0070705_100011871 3300005440 Bacteria 4410
39 Ga0070700_100141800 3300005441 Bacteria 1634
40 Ga0070694_100003810 3300005444 Bacteria 9002
41 Ga0070663_100009798 3300005455 Bacteria 5951
42 Ga0070663_100033224 3300005455 Bacteria 3563
43 Ga0070678_100004927 3300005456 Bacteria 7638
44 Ga0070678_100017416 3300005456 Bacteria 4626
45 Ga0070678_100081824 3300005456 Bacteria 2449
46 Ga0070662_100002181 3300005457 Bacteria 12005
47 Ga0068867_100002967 3300005459 Bacteria 11948
48 Ga0068867_100039904 3300005459 Bacteria 3423
49 Ga0070685_10048121 3300005466 Bacteria 2455
50 Ga0068853_100001940 3300005539 Bacteria 15256
51 Ga0070686_100025064 3300005544 Bacteria 3583
52 Ga0070696_100002906 3300005546 Bacteria 11389
53 Ga0070696_100040994 3300005546 Bacteria 3198
54 Ga0070693_100048485 3300005547 Bacteria 2419
55 Ga0070693_100207068 3300005547 Bacteria 1277
56 Ga0070665_100008591 3300005548 Bacteria 10332
57 Ga0070665_100019115 3300005548 Bacteria 6873
58 Ga0070665_100022991 3300005548 Bacteria 6277
59 Ga0070665_100023247 3300005548 Bacteria 6243
60 Ga0070704_100023796 3300005549 Bacteria 4007
61 Ga0070664_100393382 3300005564 Bacteria 1267
62 Ga0068854_100000552 3300005578 Bacteria 22587
63 Ga0068854_100009181 3300005578 Bacteria 6378
64 Ga0070702_100000276 3300005615 Bacteria 17521
65 Ga0068852_100034625 3300005616 Bacteria 4204
66 Ga0068859_100002195 3300005617 Bacteria 19815
67 Ga0068859_100017532 3300005617 Bacteria 7198
68 Ga0068859_100136019 3300005617 Bacteria 2530
69 Ga0068859_100212936 3300005617 Bacteria 2019
70 Ga0068866_10002748 3300005718 Bacteria 7255
71 Ga0068866_10007812 3300005718 Bacteria 4488
72 Ga0068861_100001676 3300005719 Bacteria 14192
73 Ga0068861_100057610 3300005719 Bacteria 2968
74 Ga0068863_100004864 3300005841 Bacteria 13238
75 Ga0068863_100080337 3300005841 Bacteria 3088
76 Ga0068863_100177384 3300005841 Bacteria 2045
77 Ga0068858_100002942 3300005842 Bacteria 17128
78 Ga0068858_100009452 3300005842 Bacteria 9299
79 Ga0068858_100104667 3300005842 Bacteria 2641
80 Ga0068860_100000232 3300005843 Bacteria 85501
81 Ga0068860_100000694 3300005843 Bacteria 38692
82 Ga0068860_100051695 3300005843 Bacteria 3909
83 Ga0068860_100278336 3300005843 Bacteria 1634
84 Ga0068862_100000055 3300005844 Bacteria 142386
85 Ga0068862_100112666 3300005844 Bacteria 2389
86 Ga0068862_100148750 3300005844 Bacteria 2083
87 Ga0081455_10035675 3300005937 Bacteria 4439
88 Ga0075365_10000777 3300006038 Bacteria 13015
89 Ga0075365_10002867 3300006038 Bacteria 8669
90 Ga0075363_100014629 3300006048 Bacteria 3841
91 Ga0075364_10006407 3300006051 Bacteria 6916
92 Ga0075364_10009314 3300006051 Bacteria 5885
93 Ga0075364_10015216 3300006051 Bacteria 4767
94 Ga0075364_10046006 3300006051 Bacteria 2840
95 Ga0070715_10002353 3300006163 Bacteria 5784
96 Ga0070716_100000551 3300006173 Bacteria 15665
97 Ga0070716_100014153 3300006173 Bacteria 4083
98 Ga0070712_100000640 3300006175 Bacteria 20589
99 Ga0070712_100000757 3300006175 Bacteria 19007
100 Ga0075369_10021467 3300006186 Bacteria 2655
101 Ga0075369_10100487 3300006186 Bacteria 1297
102 Ga0075370_10052039 3300006353 Bacteria 2323
103 Ga0075370_10145289 3300006353 Bacteria 1388
104 Ga0068871_100042495 3300006358 Bacteria 3649
105 Ga0068865_100000497 3300006881 Bacteria 22023
106 Ga0097620_100002195 3300006931 Bacteria 19815
107 Ga0097620_100017534 3300006931 Bacteria 7198
108 Ga0097620_100136022 3300006931 Bacteria 2530
109 Ga0097620_100212942 3300006931 Bacteria 2019
110 Ga0105245_10049559 3300009098 Bacteria 3761
111 Ga0105247_10000029 3300009101 Bacteria 198763
112 Ga0105247_10000541 3300009101 Bacteria 30700
113 Ga0105243_10001274 3300009148 Bacteria 22612
114 Ga0105242_10000572 3300009176 Bacteria 29126
115 Ga0105248_10000136 3300009177 Bacteria 85507
116 Ga0105248_10003057 3300009177 Bacteria 18555
117 Ga0105248_10059550 3300009177 Bacteria 4290
118 Ga0105237_10061263 3300009545 Bacteria 3763
119 Ga0105237_10074821 3300009545 Bacteria 3379
120 Ga0105249_10000077 3300009553 Bacteria 141905
121 Ga0105249_10005122 3300009553 Bacteria 11299
122 Ga0105249_10026010 3300009553 Bacteria 5271
123 Ga0105239_10019109 3300010375 Bacteria 7574
124 Ga0157374_10095161 3300013296 Bacteria 2847
125 Ga0157378_10005513 3300013297 Bacteria 11089
126 Ga0163162_10010009 3300013306 Bacteria 9221
127 Ga0163162_10050523 3300013306 Bacteria 4170
128 Ga0163162_10205462 3300013306 Bacteria 2099
129 Ga0157375_10004501 3300013308 Bacteria 12117
130 Ga0157375_10105989 3300013308 Bacteria 2902
131 Ga0163163_10008676 3300014325 Bacteria 9041
132 Ga0163163_10015630 3300014325 Bacteria 7023
133 Ga0157380_10040918 3300014326 Bacteria 3614
134 Ga0157380_10052304 3300014326 Bacteria 3234
135 Ga0157379_10128189 3300014968 Bacteria 2283
136 Ga0163161_10001874 3300017792 Bacteria 15351
137 Ga0163161_10039113 3300017792 Bacteria 3403
138 Ga0163161_10158863 3300017792 Bacteria 1723
139 Ga0209051_1000011 3300025303 Bacteria 610828
140 Ga0209051_1021078 3300025303 Bacteria 2787
141 Ga0207692_10065624 3300025898 Bacteria 1894
142 Ga0207642_10011393 3300025899 Bacteria 3170
143 Ga0207710_10000046 3300025900 Bacteria 198754
144 Ga0207710_10012842 3300025900 Bacteria 3528
145 Ga0207688_10000299 3300025901 Bacteria 22710
146 Ga0207688_10005252 3300025901 Bacteria 7035
147 Ga0207647_10016058 3300025904 Bacteria 5115
148 Ga0207647_10044246 3300025904 Bacteria 2783
149 Ga0207685_10023203 3300025905 Bacteria 2109
150 Ga0207693_10000174 3300025915 Bacteria 58853
151 Ga0207693_10003641 3300025915 Bacteria 13161
152 Ga0207663_10001237 3300025916 Bacteria 11785
153 Ga0207663_10010256 3300025916 Bacteria 4980
154 Ga0207681_10009522 3300025923 Bacteria 5938
155 Ga0207687_10001202 3300025927 Bacteria 17707
156 Ga0207664_10167800 3300025929 Bacteria 1877
157 Ga0207664_10200944 3300025929 Bacteria 1720
158 Ga0207690_10038363 3300025932 Bacteria 3117
159 Ga0207706_10005203 3300025933 Bacteria 12138
160 Ga0207686_10002261 3300025934 Bacteria 10567
161 Ga0207709_10011857 3300025935 Bacteria 4808
162 Ga0207669_10031567 3300025937 Bacteria 2961
163 Ga0207704_10000200 3300025938 Bacteria 30767
164 Ga0207665_10005287 3300025939 Bacteria 8628
165 Ga0207665_10013007 3300025939 Bacteria 5468
166 Ga0207665_10017722 3300025939 Bacteria 4680
167 Ga0207711_10000111 3300025941 Bacteria 85466
168 Ga0207711_10011949 3300025941 Bacteria 7215
169 Ga0207711_10081200 3300025941 Bacteria 2833
170 Ga0207712_10000017 3300025961 Bacteria 337943
171 Ga0207712_10007904 3300025961 Bacteria 6719
172 Ga0207712_10050469 3300025961 Bacteria 2905
173 Ga0207668_10000640 3300025972 Bacteria 21592
174 Ga0207668_10013580 3300025972 Bacteria 5021
175 Ga0207668_10217793 3300025972 Bacteria 1531
176 Ga0207640_10044274 3300025981 Bacteria 2850
177 Ga0207658_10000271 3300025986 Bacteria 54216
178 Ga0207658_10012843 3300025986 Bacteria 5719
179 Ga0207658_10107184 3300025986 Bacteria 2201
180 Ga0207658_10111444 3300025986 Bacteria 2164
181 Ga0207677_10082876 3300026023 Bacteria 2306
182 Ga0207703_10003338 3300026035 Bacteria 13477
183 Ga0207703_10011105 3300026035 Bacteria 7014
184 Ga0207703_10207086 3300026035 Bacteria 1746
185 Ga0207639_10004661 3300026041 Bacteria 9232
186 Ga0207678_10018834 3300026067 Bacteria 6063
187 Ga0207678_10037995 3300026067 Bacteria 4186
188 Ga0207708_10000934 3300026075 Bacteria 21911
189 Ga0207641_10003742 3300026088 Bacteria 13374
190 Ga0207641_10079135 3300026088 Bacteria 2849
191 Ga0207648_10000562 3300026089 Bacteria 41578
192 Ga0207648_10017208 3300026089 Bacteria 6588
193 Ga0207675_100000185 3300026118 Bacteria 56425
194 Ga0207683_10000357 3300026121 Bacteria 41951
195 Ga0207683_10026984 3300026121 Bacteria 4963
196 Ga0207683_10076060 3300026121 Bacteria 2973
197 Ga0268266_10020666 3300028379 Bacteria 5611
198 Ga0268266_10035242 3300028379 Bacteria 4257
199 Ga0268266_10064478 3300028379 Bacteria 3165
200 Ga0268265_10000067 3300028380 Bacteria 142389
201 Ga0268264_10000146 3300028381 Bacteria 165733
202 Ga0268264_10001293 3300028381 Bacteria 23636
203 Ga0268264_10065053 3300028381 Bacteria 3071
204 Ga0265338_10000917 3300028800 Bacteria 49659
205 Ga0265327_10000807 3300031251 Bacteria 47731
206 Ga0307413_10275568 3300031824 Bacteria 1262
207 Ga0307410_10124211 3300031852 Bacteria 1887
208 Ga0307406_10169428 3300031901 Bacteria 1579
209 Ga0373926_0000930 3300035083 Bacteria 8463
210 Ga0373962_0010568 3300035242 Bacteria 2304
211 Ga0373931_0003771 3300035691 Bacteria 6853
212 Ga0373931_0054538 3300035691 Bacteria 2136
213 Ga0436363_0198983 3300039450 Bacteria 1894
214 Ga0439461_0006557 3300041410 Bacteria 2032
215 Ga0439466_0003410 3300041411 Bacteria 6167
216 Ga0439465_0009557 3300041413 Bacteria 3055
217 Ga0439465_0012914 3300041413 Bacteria 2610
218 Ga0439465_0018883 3300041413 Bacteria 2154
219 Ga0451791_0653554 3300041451 Bacteria 1244
220 Ga0439431_0001699 3300041997 Bacteria 4854
221 Ga0439442_007822 3300042002 Bacteria 2157
222 Ga0439448_0023814 3300042005 Bacteria 1912
223 Ga0439434_0024816 3300042435 Bacteria 1809
224 Ga0439434_0040571 3300042435 Bacteria 1430
225 Ga0466972_0014461 3300044658 Bacteria 3952
226 Ga0466972_0062124 3300044658 Bacteria 1790
227 Ga0466961_0025522 3300044693 Bacteria 3800
228 Ga0466971_0009733 3300044719 Bacteria 4195
229 Ga0466968_0007959 3300044735 Bacteria 4048
230 Ga0466968_0024435 3300044735 Bacteria 2468
231 Ga0466970_0005978 3300044765 Bacteria 6062
232 Ga0466970_0020527 3300044765 Bacteria 3434
233 Ga0466970_0030472 3300044765 Bacteria 2844
234 Ga0466957_0006913 3300044842 Bacteria 6412
235 Ga0466957_0042186 3300044842 Bacteria 2759
236 Ga0466957_0103726 3300044842 Bacteria 1796
237 Ga0466960_0038695 3300044901 Bacteria 2245
238 Ga0466959_0039495 3300045049 Bacteria 3487
239 Ga0466958_0001358 3300045836 Bacteria 11558
240 Ga0466958_0015975 3300045836 Bacteria 4316
241 Ga0466958_0476600 3300045836 Bacteria 809
242 Ga0466967_0052619 3300045976 Bacteria 3575
243 Ga0466967_0085427 3300045976 Bacteria 2857
244 Ga0466967_0099133 3300045976 Bacteria 2661
245 Ga0495629_0110244 3300046459 Bacteria 1919
246 Ga0495638_0000427 3300046460 Bacteria 50873
247 Ga0495638_0013435 3300046460 Bacteria 5575
248 Ga0495638_0159348 3300046460 Bacteria 1303
249 Ga0495662_0100974 3300046476 Bacteria 1411
250 Ga0495620_0071703 3300046515 Bacteria 1416
251 Ga0495640_0056791 3300046533 Bacteria 2673
252 Ga0495635_0089406 3300046663 Bacteria 2107
253 Ga0495657_0012286 3300046675 Bacteria 6364
254 Ga0495624_0027975 3300046690 Bacteria 3686
255 Ga0495581_0076807 3300047315 Bacteria 1932
256 Ga0495680_0008335 3300047322 Bacteria 9427
257 Ga0495686_0004585 3300047472 Bacteria 11280
258 Ga0495593_0010158 3300047673 Bacteria 5448
259 Ga0496100_0000202 3300048903 Bacteria 32795
260 Ga0496100_0038571 3300048903 Bacteria 3028
261 Ga0496100_0101488 3300048903 Bacteria 1984
262 Ga0496100_0133632 3300048903 Bacteria 1750
263 Ga0496101_0000285 3300048904 Bacteria 35438
264 Ga0496101_0022402 3300048904 Bacteria 4349
265 Ga0496102_0000268 3300048905 Bacteria 66717
266 Ga0496102_0001430 3300048905 Bacteria 21187
267 Ga0496102_0218472 3300048905 Bacteria 1796
268 Ga0496103_0000570 3300048906 Bacteria 29250
269 Ga0496103_0004476 3300048906 Bacteria 8469
270 Ga0496104_0006039 3300048907 Bacteria 10623
271 Ga0496105_0006197 3300048908 Bacteria 9171
272 Ga0496106_0000351 3300048909 Bacteria 32650
273 Ga0496106_0003163 3300048909 Bacteria 12293
274 Ga0496107_0000393 3300048910 Bacteria 23705
275 Ga0496107_0030294 3300048910 Bacteria 3856
276 Ga0496108_0005753 3300048911 Bacteria 10040
277 Ga0496108_0425319 3300048911 Bacteria 1160
278 Ga0496109_0057307 3300048912 Bacteria 3556
279 Ga0496109_0090761 3300048912 Bacteria 2826
280 Ga0496111_0142517 3300048914 Bacteria 1776
281 Ga0496112_0003599 3300048915 Bacteria 12891
282 Ga0496112_0056074 3300048915 Bacteria 3877
283 Ga0496112_0425609 3300048915 Bacteria 1266
284 Ga0496113_0098068 3300048916 Bacteria 2268
285 Ga0496114_0003789 3300048917 Bacteria 11657
286 Ga0496115_0092633 3300048918 Bacteria 2471
287 Ga0496116_0061979 3300048919 Bacteria 2417
288 Ga0496117_0007096 3300048920 Bacteria 11073
289 Ga0496118_0005544 3300048921 Bacteria 14319
290 Ga0496119_0003869 3300048922 Bacteria 15271
291 Ga0496121_0009033 3300048924 Bacteria 11549
292 Ga0496121_0165874 3300048924 Bacteria 1610
293 Ga0496126_0017315 3300048929 Bacteria 7182
294 Ga0501032_0001365 3300049569 Bacteria 19363
295 Ga0501034_0033818 3300049571 Bacteria 5182
296 Ga0501034_0142376 3300049571 Bacteria 2377
297 Ga0501037_0000189 3300049573 Bacteria 57204
298 Ga0501038_0001906 3300049574 Bacteria 19293
299 Ga0501039_0000721 3300049575 Bacteria 23840
300 Ga0501043_0002906 3300049579 Bacteria 14306
301 Ga0501070_0018392 3300049586 Bacteria 5862
302 Ga0501070_0033116 3300049586 Bacteria 4323
303 Ga0501073_0056552 3300049589 Bacteria 2744
304 Ga0501044_0062103 3300049823 Bacteria 3820
305 nmdc:mga03683_12331_c1 3300050489 Bacteria 2094
306 nmdc:mga03n38_125363_c1 3300050490 Bacteria 1267
307 nmdc:mga03n38_28791_c1 3300050490 Bacteria 2319
308 nmdc:mga00v17_13383_c1 3300050491 Bacteria 4554
309 nmdc:mga00v17_147910_c1 3300050491 Bacteria 1508
310 nmdc:mga00v17_199297_c1 3300050491 Bacteria 1294
311 nmdc:mga00v17_22569_c2 3300050491 Bacteria 1650
312 nmdc:mga00v17_23237_c1 3300050491 Bacteria 3585
313 nmdc:mga0yw44_60401_c1 3300050492 Bacteria 2322
314 nmdc:mga07m45_4920_c2 3300050496 Bacteria 2506
315 nmdc:mga07m45_68465_c1 3300050496 Bacteria 2018
316 nmdc:mga07m45_9734_c1 3300050496 Bacteria 4996
317 Ga0500610_0131816 3300053079 Bacteria 1270
318 Ga0500635_0005017 3300053080 Bacteria 3447
319 Ga0500556_0010053 3300053104 Bacteria 2767
320 Ga0500595_036408 3300053119 Bacteria 1612
321 Ga0500652_001260 3300053131 Bacteria 8043
322 Ga0500652_107565 3300053131 Bacteria 1165
323 Ga0500616_0012914 3300053153 Bacteria 4868
324 Ga0500616_0032021 3300053153 Bacteria 2876
325 Ga0500645_000006 3300053730 Bacteria 276677
326 2616693615 2616644814 Bacteria 11555299
327 2644635965 2643221715 Bacteria 6671032
328 2738666888 2738541264 Bacteria 5935393
329 2738704218 2738541274 Bacteria 6909446
330 2739145732 2738541356 Bacteria 5935017
331 2739331298 2738543028 Bacteria 6917070
332 2842139667 2842134933 Bacteria 5847019
333 2902804568 2902799365 Bacteria 5419524
334 2902811955 2902810491 Bacteria 6794147
335 2929217664 2929212328 Bacteria 7708288
336 2939588892 2939582691 Bacteria 7088898
337 8002786890 8002784119 Bacteria 9788632
338 nmdc:mga0qj67_163334_c1
339 JGI24744J21845_10002379
340 Ga0055540_1000003
341 Ga0070676_10007583
342 Ga0070690_100001751
343 Ga0070670_100176937
344 Ga0070682_100004022
345 Ga0070682_100005542
346 Ga0070682_100052100
347 Ga0068868_100001850
348 Ga0068868_100295938
349 Ga0070691_10008999
350 Ga0070661_100078474
351 Ga0070668_100000498
352 Ga0070668_100026175
353 Ga0070668_100267027
354 Ga0070671_100049781
355 Ga0070671_100367887
356 Ga0070674_100005839
357 Ga0070674_100017055
358 Ga0070674_100039308
359 Ga0070688_100009804
360 Ga0070688_100213219
361 Ga0070659_100007076
362 Ga0070667_100001320
363 Ga0070667_100003272
364 Ga0070667_100056581
365 Ga0070667_100270468
366 Ga0070667_100307958
367 Ga0070667_100395552
368 Ga0070709_10036309
369 Ga0070714_100223998
370 Ga0070710_10000303
371 Ga0070710_10005481
372 Ga0070701_10000604
373 Ga0070711_100001503
374 Ga0070711_100033523
375 Ga0070705_100011871
376 Ga0070700_100141800
377 Ga0070694_100003810
378 Ga0070663_100009798
379 Ga0070663_100033224
380 Ga0070678_100004927
381 Ga0070678_100017416
382 Ga0070678_100081824
383 Ga0070662_100002181
384 Ga0068867_100002967
385 Ga0068867_100039904
386 Ga0070685_10048121
387 Ga0068853_100001940
388 Ga0070686_100025064
389 Ga0070696_100002906
390 Ga0070696_100040994
391 Ga0070693_100048485
392 Ga0070693_100207068
393 Ga0070665_100008591
394 Ga0070665_100019115
395 Ga0070665_100022991
396 Ga0070665_100023247
397 Ga0070704_100023796
398 Ga0070664_100393382
399 Ga0068854_100000552
400 Ga0068854_100009181
401 Ga0070702_100000276
402 Ga0068852_100034625
403 Ga0068859_100002195
404 Ga0068859_100017532
405 Ga0068859_100136019
406 Ga0068859_100212936
407 Ga0068866_10002748
408 Ga0068866_10007812
409 Ga0068861_100001676
410 Ga0068861_100057610
411 Ga0068863_100004864
412 Ga0068863_100080337
413 Ga0068863_100177384
414 Ga0068858_100002942
415 Ga0068858_100009452
416 Ga0068858_100104667
417 Ga0068860_100000232
418 Ga0068860_100000694
419 Ga0068860_100051695
420 Ga0068860_100278336
421 Ga0068862_100000055
422 Ga0068862_100112666
423 Ga0068862_100148750
424 Ga0081455_10035675
425 Ga0075365_10000777
426 Ga0075365_10002867
427 Ga0075363_100014629
428 Ga0075364_10006407
429 Ga0075364_10009314
430 Ga0075364_10015216
431 Ga0075364_10046006
432 Ga0070715_10002353
433 Ga0070716_100000551
434 Ga0070716_100014153
435 Ga0070712_100000640
436 Ga0070712_100000757
437 Ga0075369_10021467
438 Ga0075369_10100487
439 Ga0075370_10052039
440 Ga0075370_10145289
441 Ga0068871_100042495
442 Ga0068865_100000497
443 Ga0097620_100002195
444 Ga0097620_100017534
445 Ga0097620_100136022
446 Ga0097620_100212942
447 Ga0105245_10049559
448 Ga0105247_10000029
449 Ga0105247_10000541
450 Ga0105243_10001274
451 Ga0105242_10000572
452 Ga0105248_10000136
453 Ga0105248_10003057
454 Ga0105248_10059550
455 Ga0105237_10061263
456 Ga0105237_10074821
457 Ga0105249_10000077
458 Ga0105249_10005122
459 Ga0105249_10026010
460 Ga0105239_10019109
461 Ga0157374_10095161
462 Ga0157378_10005513
463 Ga0163162_10010009
464 Ga0163162_10050523
465 Ga0163162_10205462
466 Ga0157375_10004501
467 Ga0157375_10105989
468 Ga0163163_10008676
469 Ga0163163_10015630
470 Ga0157380_10040918
471 Ga0157380_10052304
472 Ga0157379_10128189
473 Ga0163161_10001874
474 Ga0163161_10039113
475 Ga0163161_10158863
476 Ga0209051_1000011
477 Ga0209051_1021078
478 Ga0207692_10065624
479 Ga0207642_10011393
480 Ga0207710_10000046
481 Ga0207710_10012842
482 Ga0207688_10000299
483 Ga0207688_10005252
484 Ga0207647_10016058
485 Ga0207647_10044246
486 Ga0207685_10023203
487 Ga0207693_10000174
488 Ga0207693_10003641
489 Ga0207663_10001237
490 Ga0207663_10010256
491 Ga0207681_10009522
492 Ga0207687_10001202
493 Ga0207664_10167800
494 Ga0207664_10200944
495 Ga0207690_10038363
496 Ga0207706_10005203
497 Ga0207686_10002261
498 Ga0207709_10011857
499 Ga0207669_10031567
500 Ga0207704_10000200
501 Ga0207665_10005287
502 Ga0207665_10013007
503 Ga0207665_10017722
504 Ga0207711_10000111
505 Ga0207711_10011949
506 Ga0207711_10081200
507 Ga0207712_10000017
508 Ga0207712_10007904
509 Ga0207712_10050469
510 Ga0207668_10000640
511 Ga0207668_10013580
512 Ga0207668_10217793
513 Ga0207640_10044274
514 Ga0207658_10000271
515 Ga0207658_10012843
516 Ga0207658_10107184
517 Ga0207658_10111444
518 Ga0207677_10082876
519 Ga0207703_10003338
520 Ga0207703_10011105
521 Ga0207703_10207086
522 Ga0207639_10004661
523 Ga0207678_10018834
524 Ga0207678_10037995
525 Ga0207708_10000934
526 Ga0207641_10003742
527 Ga0207641_10079135
528 Ga0207648_10000562
529 Ga0207648_10017208
530 Ga0207675_100000185
531 Ga0207683_10000357
532 Ga0207683_10026984
533 Ga0207683_10076060
534 Ga0268266_10020666
535 Ga0268266_10035242
536 Ga0268266_10064478
537 Ga0268265_10000067
538 Ga0268264_10000146
539 Ga0268264_10001293
540 Ga0268264_10065053
541 Ga0265338_10000917
542 Ga0265327_10000807
543 Ga0307413_10275568
544 Ga0307410_10124211
545 Ga0307406_10169428
546 Ga0373926_0000930
547 Ga0373962_0010568
548 Ga0373931_0003771
549 Ga0373931_0054538
550 Ga0436363_0198983
551 Ga0439461_0006557
552 Ga0439466_0003410
553 Ga0439465_0009557
554 Ga0439465_0012914
555 Ga0439465_0018883
556 Ga0451791_0653554
557 Ga0439431_0001699
558 Ga0439442_007822
559 Ga0439448_0023814
560 Ga0439434_0024816
561 Ga0439434_0040571
562 Ga0466972_0014461
563 Ga0466972_0062124
564 Ga0466961_0025522
565 Ga0466971_0009733
566 Ga0466968_0007959
567 Ga0466968_0024435
568 Ga0466970_0005978
569 Ga0466970_0020527
570 Ga0466970_0030472
571 Ga0466957_0006913
572 Ga0466957_0042186
573 Ga0466957_0103726
574 Ga0466960_0038695
575 Ga0466959_0039495
576 Ga0466958_0001358
577 Ga0466958_0015975
578 Ga0466958_0476600
579 Ga0466967_0052619
580 Ga0466967_0085427
581 Ga0466967_0099133
582 Ga0495629_0110244
583 Ga0495638_0000427
584 Ga0495638_0013435
585 Ga0495638_0159348
586 Ga0495662_0100974
587 Ga0495620_0071703
588 Ga0495640_0056791
589 Ga0495635_0089406
590 Ga0495657_0012286
591 Ga0495624_0027975
592 Ga0495581_0076807
593 Ga0495680_0008335
594 Ga0495686_0004585
595 Ga0495593_0010158
596 Ga0496100_0000202
597 Ga0496100_0038571
598 Ga0496100_0101488
599 Ga0496100_0133632
600 Ga0496101_0000285
601 Ga0496101_0022402
602 Ga0496102_0000268
603 Ga0496102_0001430
604 Ga0496102_0218472
605 Ga0496103_0000570
606 Ga0496103_0004476
607 Ga0496104_0006039
608 Ga0496105_0006197
609 Ga0496106_0000351
610 Ga0496106_0003163
611 Ga0496107_0000393
612 Ga0496107_0030294
613 Ga0496108_0005753
614 Ga0496108_0425319
615 Ga0496109_0057307
616 Ga0496109_0090761
617 Ga0496111_0142517
618 Ga0496112_0003599
619 Ga0496112_0056074
620 Ga0496112_0425609
621 Ga0496113_0098068
622 Ga0496114_0003789
623 Ga0496115_0092633
624 Ga0496116_0061979
625 Ga0496117_0007096
626 Ga0496118_0005544
627 Ga0496119_0003869
628 Ga0496121_0009033
629 Ga0496121_0165874
630 Ga0496126_0017315
631 Ga0501032_0001365
632 Ga0501034_0033818
633 Ga0501034_0142376
634 Ga0501037_0000189
635 Ga0501038_0001906
636 Ga0501039_0000721
637 Ga0501043_0002906
638 Ga0501070_0018392
639 Ga0501070_0033116
640 Ga0501073_0056552
641 Ga0501044_0062103
642 nmdc:mga03683_12331_c1
643 nmdc:mga03n38_125363_c1
644 nmdc:mga03n38_28791_c1
645 nmdc:mga00v17_13383_c1
646 nmdc:mga00v17_147910_c1
647 nmdc:mga00v17_199297_c1
648 nmdc:mga00v17_22569_c2
649 nmdc:mga00v17_23237_c1
650 nmdc:mga0yw44_60401_c1
651 nmdc:mga07m45_4920_c2
652 nmdc:mga07m45_68465_c1
653 nmdc:mga07m45_9734_c1
654 Ga0500610_0131816
655 Ga0500635_0005017
656 Ga0500556_0010053
657 Ga0500595_036408
658 Ga0500652_001260
659 Ga0500652_107565
660 Ga0500616_0012914
661 Ga0500616_0032021
662 Ga0500645_000006
663 2616693615
664 2644635965
665 2738666888
666 2738704218
667 2739145732
668 2739331298
669 2842139667
670 2902804568
671 2902811955
672 2929217664
673 2939588892
674 8002786890

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

220

367

0.96

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

231

343

0.88

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

2

102

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sd8-assembly1.cif.gz_X bd2924 apo-form 0.6246 70 231
4x28-assembly1.cif.gz_C crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis 0.6156 28 247
3gnc-assembly1.cif.gz_B crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment 6421 0.6117 30 236
3swo-assembly1.cif.gz_D crystal structure of a glutaryl-coa dehydrogenase from mycobacterium smegmatis in complex with fadh2 0.6099 33 235
5lnx-assembly1.cif.gz_D crystal structure of mmgc, an acyl-coa dehydrogenase from bacillus subtilis. 0.6006 30 247
ID Description Score Start End Superfamily
af_I6YCF5_117_179_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.7901 107 168 2.40.110.10
5zw2A03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.7875 190 247 1.20.140.10
af_P95187_333_468_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.777 190 247 1.20.140.10
af_I6YCF5_117_179_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.7487 107 168 2.40.110.10
af_A4HSY0_268_414_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.6947 174 247 1.20.140.10
ID Description Score Start End GO Terms
AF-X1C3I3-F1-model_v4 Acyl-CoA dehydrogenase 0.7048 59 247 GO:0003995
GO:0050660
AF-X7YLY8-F1-model_v4 Acyl-CoA dehydrogenase, C-terminal domain protein 0.7013 72 241 GO:0003995
AF-A0A7W3NVQ6-F1-model_v4 Alkylation response protein AidB-like acyl-CoA dehydrogenase 0.7008 62 248 GO:0003995
GO:0050660
AF-A0A348WHU5-F1-model_v4 Pimeloyl-CoA dehydrogenase small subunit 0.6987 59 238 GO:0003995
AF-A0A813B3T8-F1-model_v4 deleted 0.6978 56 247

Map