F413278

General Info

Members Datasets Scaffolds Average Seq Length
337 185 674 165

Family's Representative Sequence

Representative Sequence 3300050509|nmdc:mga0qj67_655445_c1|nmdc:mga0qj67_655445_c1_43_570
Length 175
Sequence MDGRSGVTDEVDKLVAAWRHERPDVDMGPLEVFSRITRLARHLDRARRTAFAEHELEVWEFDVLAALRRAGKPYQLSPGQLITSGTMTNRIDRLAARGLVRRLPDPTDRRGVLVRLTNTGRERADSALDDLLERERELLADLDAEQRSQLAAVLRTLVAPFDNSVASSGPAAASA

Samples

Sample ID Description Type Environment
1 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
10 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
75 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
84 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
85 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
86 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
87 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
88 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
91 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
92 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
93 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
96 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
97 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
98 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
99 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
100 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
103 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
104 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
105 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
106 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
107 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
110 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
115 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
122 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
135 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
158 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
159 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
162 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
163 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
164 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
167 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
168 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
173 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
176 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
177 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
178 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
179 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
180 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
184 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
185 2643221696 Nocardioides sp. Root140 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.81
Metatranscriptomes 0.59
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.36
Nodule 0
Rhizoplane 2.08
Rhizosphere 71.51
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0qj67_655445_c1 3300050509 Bacteria 837
2 rootH2_10063275 3300003320 Bacteria 12046
3 Ga0070658_10430737 3300005327 Bacteria 1135
4 Ga0070692_10133834 3300005345 Bacteria 1396
5 Ga0070668_100218482 3300005347 Bacteria 1571
6 Ga0070667_100077379 3300005367 Bacteria 2841
7 Ga0070705_100018593 3300005440 Bacteria 3645
8 Ga0070700_101067619 3300005441 Bacteria 668
9 Ga0070678_100031202 3300005456 Bacteria 3673
10 Ga0070678_100367194 3300005456 Bacteria 1242
11 Ga0068867_100216200 3300005459 Bacteria 1542
12 Ga0070685_10119479 3300005466 Bacteria 1635
13 Ga0070684_100118887 3300005535 Bacteria 2376
14 Ga0070696_100108345 3300005546 Bacteria 1998
15 Ga0070693_100197442 3300005547 Bacteria 1305
16 Ga0070665_100733491 3300005548 Bacteria 1001
17 Ga0068857_101081036 3300005577 Bacteria 774
18 Ga0070702_100005483 3300005615 Bacteria 5916
19 Ga0070702_100459745 3300005615 Bacteria 925
20 Ga0068852_100917836 3300005616 Bacteria 893
21 Ga0068859_100537627 3300005617 Bacteria 1263
22 Ga0068864_101306583 3300005618 Bacteria 726
23 Ga0068866_10175241 3300005718 Bacteria 1262
24 Ga0068866_10230006 3300005718 Bacteria 1124
25 Ga0068870_10365632 3300005840 Bacteria 929
26 Ga0068860_100000314 3300005843 Bacteria 66294
27 Ga0070717_10099004 3300006028 Bacteria 2473
28 Ga0075365_10001505 3300006038 Bacteria 10642
29 Ga0075365_10032757 3300006038 Bacteria 3344
30 Ga0075365_10032804 3300006038 Bacteria 3342
31 Ga0075365_10037326 3300006038 Bacteria 3154
32 Ga0075365_10037423 3300006038 Bacteria 3150
33 Ga0075365_10217331 3300006038 Bacteria 1341
34 Ga0075365_10314606 3300006038 Bacteria 1102
35 Ga0075365_10321171 3300006038 Bacteria 1090
36 Ga0075365_10499252 3300006038 Bacteria 860
37 Ga0075368_10008983 3300006042 Bacteria 3585
38 Ga0075368_10011738 3300006042 Bacteria 3192
39 Ga0075368_10107238 3300006042 Bacteria 1150
40 Ga0075363_100020078 3300006048 Bacteria 3348
41 Ga0075363_100046291 3300006048 Bacteria 2307
42 Ga0075363_100051413 3300006048 Bacteria 2197
43 Ga0075363_100123417 3300006048 Bacteria 1448
44 Ga0075363_100137333 3300006048 Bacteria 1375
45 Ga0075363_100147146 3300006048 Bacteria 1328
46 Ga0075364_10084814 3300006051 Bacteria 2097
47 Ga0075364_10126785 3300006051 Bacteria 1712
48 Ga0075364_10129011 3300006051 Bacteria 1696
49 Ga0075364_10186802 3300006051 Bacteria 1403
50 Ga0075364_10188120 3300006051 Bacteria 1398
51 Ga0075364_10243186 3300006051 Bacteria 1222
52 Ga0075364_10297382 3300006051 Bacteria 1099
53 Ga0075364_10329164 3300006051 Bacteria 1040
54 Ga0075367_10048667 3300006178 Bacteria 2498
55 Ga0075367_10178479 3300006178 Bacteria 1324
56 Ga0075367_10233083 3300006178 Bacteria 1153
57 Ga0075367_10254622 3300006178 Bacteria 1101
58 Ga0075370_10432679 3300006353 Bacteria 791
59 Ga0075428_100092319 3300006844 Bacteria 3301
60 Ga0075431_100496651 3300006847 Bacteria 1212
61 Ga0068865_100666160 3300006881 Bacteria 886
62 Ga0097620_100537705 3300006931 Bacteria 1263
63 Ga0105245_10768817 3300009098 Bacteria 1000
64 Ga0114129_10428236 3300009147 Bacteria 1739
65 Ga0105243_10022452 3300009148 Bacteria 4796
66 Ga0105243_10215890 3300009148 Bacteria 1692
67 Ga0105243_10705635 3300009148 Bacteria 984
68 Ga0105242_10129538 3300009176 Bacteria 2176
69 Ga0105249_10012408 3300009553 Bacteria 7511
70 Ga0157369_10204390 3300013105 Bacteria 2072
71 Ga0157378_10133524 3300013297 Bacteria 2300
72 Ga0163162_10064713 3300013306 Bacteria 3702
73 Ga0157372_12482749 3300013307 Bacteria 595
74 Ga0157375_10013458 3300013308 Bacteria 7282
75 Ga0157375_10242707 3300013308 Bacteria 1961
76 Ga0163163_10654023 3300014325 Bacteria 1114
77 Ga0163161_10060004 3300017792 Bacteria 2767
78 Ga0163161_10060582 3300017792 Bacteria 2755
79 Ga0206353_11637499 3300020082 Bacteria 1649
80 Ga0224712_10001833 3300022467 Bacteria 5088
81 Ga0207642_10254527 3300025899 Bacteria 998
82 Ga0207647_10267790 3300025904 Bacteria 977
83 Ga0207643_10186354 3300025908 Bacteria 1258
84 Ga0207687_10653018 3300025927 Bacteria 890
85 Ga0207686_10013287 3300025934 Bacteria 4553
86 Ga0207709_10014859 3300025935 Bacteria 4307
87 Ga0207709_10258986 3300025935 Bacteria 1275
88 Ga0207669_10404033 3300025937 Bacteria 1071
89 Ga0207704_10420956 3300025938 Bacteria 1059
90 Ga0207661_10925909 3300025944 Bacteria 803
91 Ga0207712_10264483 3300025961 Bacteria 1396
92 Ga0207712_10528493 3300025961 Bacteria 1012
93 Ga0207668_10915720 3300025972 Bacteria 781
94 Ga0207677_10257020 3300026023 Bacteria 1422
95 Ga0207708_10423863 3300026075 Bacteria 1104
96 Ga0207702_10385891 3300026078 Bacteria 1348
97 Ga0207676_10282913 3300026095 Bacteria 1507
98 Ga0207674_10498695 3300026116 Bacteria 1176
99 Ga0207674_10520860 3300026116 Bacteria 1148
100 Ga0207675_100127428 3300026118 Bacteria 2412
101 Ga0207683_10056343 3300026121 Bacteria 3447
102 Ga0207683_10209769 3300026121 Bacteria 1773
103 Ga0209813_10007166 3300027866 Bacteria 2771
104 Ga0209813_10059788 3300027866 Bacteria 1214
105 Ga0209813_10102890 3300027866 Bacteria 974
106 Ga0268266_10511187 3300028379 Bacteria 1148
107 Ga0268264_10000531 3300028381 Bacteria 48262
108 Ga0268264_10521715 3300028381 Bacteria 1161
109 Ga0307511_10131393 3300030521 Bacteria 1507
110 Ga0307509_10016922 3300031507 Bacteria 8410
111 Ga0307508_10039379 3300031616 Bacteria 4247
112 Ga0307405_10324022 3300031731 Bacteria 1178
113 Ga0307405_11030165 3300031731 Bacteria 704
114 Ga0307413_10255357 3300031824 Bacteria 1303
115 Ga0307410_10073650 3300031852 Bacteria 2376
116 Ga0307407_10069929 3300031903 Bacteria 2085
117 Ga0307407_10738457 3300031903 Bacteria 744
118 Ga0307412_10012577 3300031911 Bacteria 4939
119 Ga0307412_10158433 3300031911 Bacteria 1679
120 Ga0307412_11769999 3300031911 Bacteria 568
121 Ga0307409_100002831 3300031995 Bacteria 9172
122 Ga0307409_100015371 3300031995 Bacteria 5022
123 Ga0307409_100191667 3300031995 Bacteria 1820
124 Ga0307409_100232360 3300031995 Bacteria 1673
125 Ga0307409_100561415 3300031995 Bacteria 1122
126 Ga0307416_100000285 3300032002 Bacteria 26584
127 Ga0307416_100035901 3300032002 Bacteria 3793
128 Ga0307416_101064254 3300032002 Bacteria 913
129 Ga0307416_101281937 3300032002 Bacteria 838
130 Ga0307414_11088355 3300032004 Bacteria 738
131 Ga0307411_10136817 3300032005 Bacteria 1800
132 Ga0307411_10157372 3300032005 Bacteria 1697
133 Ga0307411_10204252 3300032005 Bacteria 1520
134 Ga0307415_100003399 3300032126 Bacteria 8101
135 Ga0307415_100360970 3300032126 Bacteria 1227
136 Ga0307507_10000113 3300033179 Bacteria 133812
137 Ga0307510_10019257 3300033180 Bacteria 8010
138 Ga0395899_0234311 3300037312 Bacteria 1266
139 Ga0395900_0086084 3300037418 Bacteria 3230
140 Ga0395898_0082872 3300037466 Bacteria 3091
141 Ga0395905_0022511 3300037471 Bacteria 5961
142 Ga0395901_0055206 3300038443 Bacteria 4130
143 Ga0395901_0083301 3300038443 Bacteria 3343
144 Ga0395901_0518240 3300038443 Bacteria 1212
145 Ga0400485_18363 3300038735 Bacteria 27752
146 Ga0400488_45559 3300038741 Bacteria 3982
147 Ga0439465_0052418 3300041413 Bacteria 1339
148 Ga0451837_1586976 3300041494 Bacteria 907
149 Ga0451841_0883164 3300041498 Bacteria 604
150 Ga0451849_1235022 3300041505 Bacteria 576
151 Ga0451843_0437151 3300041509 Bacteria 1066
152 Ga0451843_0648640 3300041509 Bacteria 719
153 Ga0451853_2405215 3300041512 Bacteria 1045
154 Ga0439445_0031008 3300042004 Bacteria 1388
155 Ga0439457_098071 3300042014 Bacteria 682
156 Ga0450906_058879 3300042145 Bacteria 682
157 Ga0439434_0003267 3300042435 Bacteria 4760
158 Ga0466969_0000471 3300044656 Bacteria 22118
159 Ga0466969_0082912 3300044656 Bacteria 1527
160 Ga0466969_0101759 3300044656 Bacteria 1351
161 Ga0466969_0118390 3300044656 Bacteria 1235
162 Ga0466972_0071257 3300044658 Bacteria 1658
163 Ga0466972_0200519 3300044658 Bacteria 935
164 Ga0466965_0127640 3300044683 Bacteria 1317
165 Ga0466965_0453994 3300044683 Bacteria 714
166 Ga0466966_0035458 3300044684 Bacteria 3222
167 Ga0466966_0078076 3300044684 Bacteria 2065
168 Ga0466961_0521349 3300044693 Bacteria 717
169 Ga0466963_0255777 3300044694 Bacteria 1229
170 Ga0466964_0056999 3300044706 Bacteria 1616
171 Ga0466971_0001060 3300044719 Bacteria 11398
172 Ga0466971_0108437 3300044719 Bacteria 1280
173 Ga0466971_0212783 3300044719 Bacteria 914
174 Ga0466970_0065887 3300044765 Bacteria 1944
175 Ga0466970_0077172 3300044765 Bacteria 1796
176 Ga0466970_0089134 3300044765 Bacteria 1673
177 Ga0466970_0118112 3300044765 Bacteria 1451
178 Ga0466970_0132371 3300044765 Bacteria 1370
179 Ga0466970_0189550 3300044765 Bacteria 1142
180 Ga0466970_0603990 3300044765 Bacteria 636
181 Ga0466957_0016218 3300044842 Bacteria 4356
182 Ga0466957_0345535 3300044842 Bacteria 1008
183 Ga0466957_0439186 3300044842 Bacteria 898
184 Ga0466960_0042855 3300044901 Bacteria 2150
185 Ga0466960_0362540 3300044901 Bacteria 829
186 Ga0466960_0409943 3300044901 Bacteria 782
187 Ga0466959_0231103 3300045049 Bacteria 1280
188 Ga0466959_0237484 3300045049 Bacteria 1260
189 Ga0466959_0344546 3300045049 Bacteria 1016
190 Ga0466958_0024162 3300045836 Bacteria 3575
191 Ga0466958_0297840 3300045836 Bacteria 1035
192 Ga0466958_0583369 3300045836 Bacteria 727
193 Ga0466967_0168319 3300045976 Bacteria 2060
194 Ga0466967_0443735 3300045976 Bacteria 1267
195 Ga0466967_0580965 3300045976 Bacteria 1105
196 Ga0466967_0688554 3300045976 Bacteria 1012
197 Ga0466967_2043370 3300045976 Bacteria 570
198 Ga0495651_0001394 3300046462 Bacteria 18718
199 Ga0495664_0110160 3300046477 Bacteria 1662
200 Ga0495620_0164765 3300046515 Bacteria 861
201 Ga0495628_0007008 3300046516 Bacteria 9777
202 Ga0495652_0003671 3300046529 Bacteria 15024
203 Ga0495652_0673680 3300046529 Bacteria 698
204 Ga0495587_0110066 3300046536 Bacteria 1583
205 Ga0495635_0114674 3300046663 Bacteria 1839
206 Ga0495623_0111246 3300046679 Bacteria 1660
207 Ga0495646_0026443 3300046680 Bacteria 3645
208 Ga0495600_0008681 3300046809 Bacteria 6253
209 Ga0495674_0878821 3300047319 Bacteria 693
210 Ga0495602_0046809 3300048088 Bacteria 3903
211 Ga0496102_0271847 3300048905 Bacteria 1598
212 Ga0496106_0085977 3300048909 Bacteria 2422
213 Ga0496108_0066094 3300048911 Bacteria 3049
214 Ga0496109_0117782 3300048912 Bacteria 2473
215 Ga0496110_0461355 3300048913 Bacteria 1158
216 Ga0496114_0325080 3300048917 Bacteria 1359
217 Ga0496114_0929342 3300048917 Bacteria 752
218 Ga0496124_0626120 3300048927 Bacteria 695
219 Ga0496126_0191305 3300048929 Bacteria 1733
220 Ga0501031_0016054 3300049568 Bacteria 4862
221 Ga0501031_0025355 3300049568 Bacteria 3868
222 Ga0501031_0090978 3300049568 Bacteria 1990
223 Ga0501032_0658825 3300049569 Bacteria 665
224 Ga0501033_0001249 3300049570 Bacteria 22773
225 Ga0501033_0047549 3300049570 Bacteria 3190
226 Ga0501034_0156998 3300049571 Bacteria 2248
227 Ga0501034_0790888 3300049571 Bacteria 842
228 Ga0501034_0988447 3300049571 Bacteria 726
229 Ga0501036_0011470 3300049572 Bacteria 7336
230 Ga0501036_0037212 3300049572 Bacteria 4117
231 Ga0501036_0169116 3300049572 Bacteria 1842
232 Ga0501036_0640761 3300049572 Bacteria 880
233 Ga0501037_0004496 3300049573 Bacteria 10136
234 Ga0501038_0009139 3300049574 Bacteria 9092
235 Ga0501038_0027857 3300049574 Bacteria 5021
236 Ga0501038_0222569 3300049574 Bacteria 1505
237 Ga0501039_0008951 3300049575 Bacteria 7628
238 Ga0501039_0009143 3300049575 Bacteria 7549
239 Ga0501039_0040784 3300049575 Bacteria 3583
240 Ga0501039_0050194 3300049575 Bacteria 3227
241 Ga0501039_0415418 3300049575 Bacteria 1057
242 Ga0501039_0552746 3300049575 Bacteria 903
243 Ga0501040_0026326 3300049576 Bacteria 3912
244 Ga0501040_0038386 3300049576 Bacteria 3256
245 Ga0501040_0275452 3300049576 Bacteria 1202
246 Ga0501040_0950883 3300049576 Bacteria 623
247 Ga0501041_0045135 3300049577 Bacteria 2679
248 Ga0501041_0049961 3300049577 Bacteria 2548
249 Ga0501042_0017812 3300049578 Bacteria 4906
250 Ga0501042_0746313 3300049578 Bacteria 712
251 Ga0501043_0029432 3300049579 Bacteria 4314
252 Ga0501043_0037593 3300049579 Bacteria 3807
253 Ga0501046_0000508 3300049580 Bacteria 38646
254 Ga0501046_0148307 3300049580 Bacteria 1770
255 Ga0501047_0282979 3300049581 Bacteria 1502
256 Ga0501048_0006825 3300049582 Bacteria 8672
257 Ga0501048_0065004 3300049582 Bacteria 2580
258 Ga0501067_0082971 3300049583 Bacteria 1778
259 Ga0501067_0434258 3300049583 Bacteria 733
260 Ga0501068_0143743 3300049584 Bacteria 1496
261 Ga0501069_0241993 3300049585 Bacteria 1051
262 Ga0501070_0129356 3300049586 Bacteria 2086
263 Ga0501070_0411329 3300049586 Bacteria 1093
264 Ga0501071_0018539 3300049587 Bacteria 4820
265 Ga0501072_0063151 3300049588 Bacteria 2921
266 Ga0501072_0875786 3300049588 Bacteria 702
267 Ga0501073_0878579 3300049589 Bacteria 617
268 Ga0501074_0030875 3300049590 Bacteria 3882
269 Ga0501074_0594025 3300049590 Bacteria 783
270 Ga0501075_0012455 3300049591 Bacteria 6045
271 Ga0501075_0267561 3300049591 Bacteria 1303
272 Ga0501076_0096167 3300049592 Bacteria 2385
273 Ga0501077_0346929 3300049593 Bacteria 947
274 Ga0501079_0138037 3300049741 Bacteria 1899
275 Ga0501079_1117828 3300049741 Bacteria 621
276 Ga0501080_0075165 3300049742 Bacteria 3143
277 Ga0501080_0445939 3300049742 Bacteria 1161
278 Ga0501080_0604613 3300049742 Bacteria 973
279 Ga0501081_0449840 3300049743 Bacteria 957
280 Ga0501081_0827701 3300049743 Bacteria 697
281 Ga0501035_0055803 3300049822 Bacteria 3527
282 Ga0501035_0061252 3300049822 Bacteria 3349
283 Ga0501035_0799739 3300049822 Bacteria 753
284 Ga0501035_1150312 3300049822 Bacteria 604
285 Ga0501045_0049243 3300049824 Bacteria 3072
286 nmdc:mga03683_401532_c1 3300050489 Bacteria 654
287 nmdc:mga03n38_107767_c1 3300050490 Bacteria 1352
288 nmdc:mga03n38_154662_c1 3300050490 Bacteria 1157
289 nmdc:mga03n38_50363_c1 3300050490 Bacteria 1856
290 nmdc:mga00v17_118818_c1 3300050491 Bacteria 1682
291 nmdc:mga00v17_186789_c1 3300050491 Bacteria 1338
292 nmdc:mga00v17_304997_c1 3300050491 Bacteria 1034
293 nmdc:mga00v17_32006_c1 3300050491 Bacteria 3106
294 nmdc:mga00v17_524149_c1 3300050491 Bacteria 767
295 nmdc:mga00v17_5967_c1 3300050491 Bacteria 6443
296 nmdc:mga00v17_78008_c1 3300050491 Bacteria 2063
297 nmdc:mga00v17_83215_c1 3300050491 Bacteria 2001
298 nmdc:mga0yw44_138823_c1 3300050492 Bacteria 1578
299 nmdc:mga0yw44_143353_c1 3300050492 Bacteria 1554
300 nmdc:mga0yw44_20873_c1 3300050492 Bacteria 3644
301 nmdc:mga0yw44_248170_c1 3300050492 Bacteria 1184
302 nmdc:mga0yw44_25480_c1 3300050492 Bacteria 1263
303 nmdc:mga0yw44_387655_c1 3300050492 Bacteria 944
304 nmdc:mga0yw44_4048_c1 3300050492 Bacteria 6634
305 nmdc:mga0yw44_52017_c1 3300050492 Bacteria 2482
306 nmdc:mga0yw44_573526_c1 3300050492 Bacteria 766
307 nmdc:mga0yw44_657198_c1 3300050492 Bacteria 712
308 nmdc:mga0yw44_681357_c1 3300050492 Bacteria 699
309 nmdc:mga0yw44_69220_c1 3300050492 Bacteria 2185
310 nmdc:mga0yw44_790663_c1 3300050492 Bacteria 644
311 nmdc:mga06z11_126485_c1 3300050494 Bacteria 1431
312 nmdc:mga06z11_131546_c1 3300050494 Bacteria 1406
313 nmdc:mga06z11_27402_c1 3300050494 Bacteria 2724
314 nmdc:mga06z11_341194_c1 3300050494 Bacteria 896
315 nmdc:mga06z11_640205_c1 3300050494 Bacteria 647
316 nmdc:mga04h51_11186_c1 3300050495 Bacteria 2485
317 nmdc:mga04h51_121314_c1 3300050495 Bacteria 974
318 nmdc:mga04h51_160745_c1 3300050495 Bacteria 864
319 nmdc:mga04h51_37971_c1 3300050495 Bacteria 1557
320 nmdc:mga07m45_167154_c1 3300050496 Bacteria 1277
321 nmdc:mga07m45_67170_c1 3300050496 Bacteria 1223
322 nmdc:mga05p37_374058_c1 3300050507 Bacteria 1671
323 nmdc:mga08y16_1192242_c1 3300050511 Bacteria 732
324 Ga0495601_0008524 3300053077 Bacteria 6053
325 Ga0495612_0101967 3300053078 Bacteria 1222
326 Ga0500644_0000003 3300053088 Bacteria 199121
327 Ga0500554_057872 3300053102 Bacteria 1236
328 Ga0501084_0183478 3300054114 Bacteria 1766
329 Ga0501084_0260552 3300054114 Bacteria 1464
330 Ga0501084_0408405 3300054114 Bacteria 1148
331 Ga0501082_0291620 3300060353 Bacteria 1420
332 Ga0466962_0000252 3300061719 Bacteria 22565
333 Ga0466962_0052113 3300061719 Bacteria 1956
334 Ga0530510_0086656 3300061734 Bacteria 2282
335 Ga0530510_0090790 3300061734 Bacteria 2228
336 2515857484 2515154155 Bacteria 7985436
337 2644533678 2643221696 Bacteria 5431823
338 nmdc:mga0qj67_655445_c1
339 rootH2_10063275
340 Ga0070658_10430737
341 Ga0070692_10133834
342 Ga0070668_100218482
343 Ga0070667_100077379
344 Ga0070705_100018593
345 Ga0070700_101067619
346 Ga0070678_100031202
347 Ga0070678_100367194
348 Ga0068867_100216200
349 Ga0070685_10119479
350 Ga0070684_100118887
351 Ga0070696_100108345
352 Ga0070693_100197442
353 Ga0070665_100733491
354 Ga0068857_101081036
355 Ga0070702_100005483
356 Ga0070702_100459745
357 Ga0068852_100917836
358 Ga0068859_100537627
359 Ga0068864_101306583
360 Ga0068866_10175241
361 Ga0068866_10230006
362 Ga0068870_10365632
363 Ga0068860_100000314
364 Ga0070717_10099004
365 Ga0075365_10001505
366 Ga0075365_10032757
367 Ga0075365_10032804
368 Ga0075365_10037326
369 Ga0075365_10037423
370 Ga0075365_10217331
371 Ga0075365_10314606
372 Ga0075365_10321171
373 Ga0075365_10499252
374 Ga0075368_10008983
375 Ga0075368_10011738
376 Ga0075368_10107238
377 Ga0075363_100020078
378 Ga0075363_100046291
379 Ga0075363_100051413
380 Ga0075363_100123417
381 Ga0075363_100137333
382 Ga0075363_100147146
383 Ga0075364_10084814
384 Ga0075364_10126785
385 Ga0075364_10129011
386 Ga0075364_10186802
387 Ga0075364_10188120
388 Ga0075364_10243186
389 Ga0075364_10297382
390 Ga0075364_10329164
391 Ga0075367_10048667
392 Ga0075367_10178479
393 Ga0075367_10233083
394 Ga0075367_10254622
395 Ga0075370_10432679
396 Ga0075428_100092319
397 Ga0075431_100496651
398 Ga0068865_100666160
399 Ga0097620_100537705
400 Ga0105245_10768817
401 Ga0114129_10428236
402 Ga0105243_10022452
403 Ga0105243_10215890
404 Ga0105243_10705635
405 Ga0105242_10129538
406 Ga0105249_10012408
407 Ga0157369_10204390
408 Ga0157378_10133524
409 Ga0163162_10064713
410 Ga0157372_12482749
411 Ga0157375_10013458
412 Ga0157375_10242707
413 Ga0163163_10654023
414 Ga0163161_10060004
415 Ga0163161_10060582
416 Ga0206353_11637499
417 Ga0224712_10001833
418 Ga0207642_10254527
419 Ga0207647_10267790
420 Ga0207643_10186354
421 Ga0207687_10653018
422 Ga0207686_10013287
423 Ga0207709_10014859
424 Ga0207709_10258986
425 Ga0207669_10404033
426 Ga0207704_10420956
427 Ga0207661_10925909
428 Ga0207712_10264483
429 Ga0207712_10528493
430 Ga0207668_10915720
431 Ga0207677_10257020
432 Ga0207708_10423863
433 Ga0207702_10385891
434 Ga0207676_10282913
435 Ga0207674_10498695
436 Ga0207674_10520860
437 Ga0207675_100127428
438 Ga0207683_10056343
439 Ga0207683_10209769
440 Ga0209813_10007166
441 Ga0209813_10059788
442 Ga0209813_10102890
443 Ga0268266_10511187
444 Ga0268264_10000531
445 Ga0268264_10521715
446 Ga0307511_10131393
447 Ga0307509_10016922
448 Ga0307508_10039379
449 Ga0307405_10324022
450 Ga0307405_11030165
451 Ga0307413_10255357
452 Ga0307410_10073650
453 Ga0307407_10069929
454 Ga0307407_10738457
455 Ga0307412_10012577
456 Ga0307412_10158433
457 Ga0307412_11769999
458 Ga0307409_100002831
459 Ga0307409_100015371
460 Ga0307409_100191667
461 Ga0307409_100232360
462 Ga0307409_100561415
463 Ga0307416_100000285
464 Ga0307416_100035901
465 Ga0307416_101064254
466 Ga0307416_101281937
467 Ga0307414_11088355
468 Ga0307411_10136817
469 Ga0307411_10157372
470 Ga0307411_10204252
471 Ga0307415_100003399
472 Ga0307415_100360970
473 Ga0307507_10000113
474 Ga0307510_10019257
475 Ga0395899_0234311
476 Ga0395900_0086084
477 Ga0395898_0082872
478 Ga0395905_0022511
479 Ga0395901_0055206
480 Ga0395901_0083301
481 Ga0395901_0518240
482 Ga0400485_18363
483 Ga0400488_45559
484 Ga0439465_0052418
485 Ga0451837_1586976
486 Ga0451841_0883164
487 Ga0451849_1235022
488 Ga0451843_0437151
489 Ga0451843_0648640
490 Ga0451853_2405215
491 Ga0439445_0031008
492 Ga0439457_098071
493 Ga0450906_058879
494 Ga0439434_0003267
495 Ga0466969_0000471
496 Ga0466969_0082912
497 Ga0466969_0101759
498 Ga0466969_0118390
499 Ga0466972_0071257
500 Ga0466972_0200519
501 Ga0466965_0127640
502 Ga0466965_0453994
503 Ga0466966_0035458
504 Ga0466966_0078076
505 Ga0466961_0521349
506 Ga0466963_0255777
507 Ga0466964_0056999
508 Ga0466971_0001060
509 Ga0466971_0108437
510 Ga0466971_0212783
511 Ga0466970_0065887
512 Ga0466970_0077172
513 Ga0466970_0089134
514 Ga0466970_0118112
515 Ga0466970_0132371
516 Ga0466970_0189550
517 Ga0466970_0603990
518 Ga0466957_0016218
519 Ga0466957_0345535
520 Ga0466957_0439186
521 Ga0466960_0042855
522 Ga0466960_0362540
523 Ga0466960_0409943
524 Ga0466959_0231103
525 Ga0466959_0237484
526 Ga0466959_0344546
527 Ga0466958_0024162
528 Ga0466958_0297840
529 Ga0466958_0583369
530 Ga0466967_0168319
531 Ga0466967_0443735
532 Ga0466967_0580965
533 Ga0466967_0688554
534 Ga0466967_2043370
535 Ga0495651_0001394
536 Ga0495664_0110160
537 Ga0495620_0164765
538 Ga0495628_0007008
539 Ga0495652_0003671
540 Ga0495652_0673680
541 Ga0495587_0110066
542 Ga0495635_0114674
543 Ga0495623_0111246
544 Ga0495646_0026443
545 Ga0495600_0008681
546 Ga0495674_0878821
547 Ga0495602_0046809
548 Ga0496102_0271847
549 Ga0496106_0085977
550 Ga0496108_0066094
551 Ga0496109_0117782
552 Ga0496110_0461355
553 Ga0496114_0325080
554 Ga0496114_0929342
555 Ga0496124_0626120
556 Ga0496126_0191305
557 Ga0501031_0016054
558 Ga0501031_0025355
559 Ga0501031_0090978
560 Ga0501032_0658825
561 Ga0501033_0001249
562 Ga0501033_0047549
563 Ga0501034_0156998
564 Ga0501034_0790888
565 Ga0501034_0988447
566 Ga0501036_0011470
567 Ga0501036_0037212
568 Ga0501036_0169116
569 Ga0501036_0640761
570 Ga0501037_0004496
571 Ga0501038_0009139
572 Ga0501038_0027857
573 Ga0501038_0222569
574 Ga0501039_0008951
575 Ga0501039_0009143
576 Ga0501039_0040784
577 Ga0501039_0050194
578 Ga0501039_0415418
579 Ga0501039_0552746
580 Ga0501040_0026326
581 Ga0501040_0038386
582 Ga0501040_0275452
583 Ga0501040_0950883
584 Ga0501041_0045135
585 Ga0501041_0049961
586 Ga0501042_0017812
587 Ga0501042_0746313
588 Ga0501043_0029432
589 Ga0501043_0037593
590 Ga0501046_0000508
591 Ga0501046_0148307
592 Ga0501047_0282979
593 Ga0501048_0006825
594 Ga0501048_0065004
595 Ga0501067_0082971
596 Ga0501067_0434258
597 Ga0501068_0143743
598 Ga0501069_0241993
599 Ga0501070_0129356
600 Ga0501070_0411329
601 Ga0501071_0018539
602 Ga0501072_0063151
603 Ga0501072_0875786
604 Ga0501073_0878579
605 Ga0501074_0030875
606 Ga0501074_0594025
607 Ga0501075_0012455
608 Ga0501075_0267561
609 Ga0501076_0096167
610 Ga0501077_0346929
611 Ga0501079_0138037
612 Ga0501079_1117828
613 Ga0501080_0075165
614 Ga0501080_0445939
615 Ga0501080_0604613
616 Ga0501081_0449840
617 Ga0501081_0827701
618 Ga0501035_0055803
619 Ga0501035_0061252
620 Ga0501035_0799739
621 Ga0501035_1150312
622 Ga0501045_0049243
623 nmdc:mga03683_401532_c1
624 nmdc:mga03n38_107767_c1
625 nmdc:mga03n38_154662_c1
626 nmdc:mga03n38_50363_c1
627 nmdc:mga00v17_118818_c1
628 nmdc:mga00v17_186789_c1
629 nmdc:mga00v17_304997_c1
630 nmdc:mga00v17_32006_c1
631 nmdc:mga00v17_524149_c1
632 nmdc:mga00v17_5967_c1
633 nmdc:mga00v17_78008_c1
634 nmdc:mga00v17_83215_c1
635 nmdc:mga0yw44_138823_c1
636 nmdc:mga0yw44_143353_c1
637 nmdc:mga0yw44_20873_c1
638 nmdc:mga0yw44_248170_c1
639 nmdc:mga0yw44_25480_c1
640 nmdc:mga0yw44_387655_c1
641 nmdc:mga0yw44_4048_c1
642 nmdc:mga0yw44_52017_c1
643 nmdc:mga0yw44_573526_c1
644 nmdc:mga0yw44_657198_c1
645 nmdc:mga0yw44_681357_c1
646 nmdc:mga0yw44_69220_c1
647 nmdc:mga0yw44_790663_c1
648 nmdc:mga06z11_126485_c1
649 nmdc:mga06z11_131546_c1
650 nmdc:mga06z11_27402_c1
651 nmdc:mga06z11_341194_c1
652 nmdc:mga06z11_640205_c1
653 nmdc:mga04h51_11186_c1
654 nmdc:mga04h51_121314_c1
655 nmdc:mga04h51_160745_c1
656 nmdc:mga04h51_37971_c1
657 nmdc:mga07m45_167154_c1
658 nmdc:mga07m45_67170_c1
659 nmdc:mga05p37_374058_c1
660 nmdc:mga08y16_1192242_c1
661 Ga0495601_0008524
662 Ga0495612_0101967
663 Ga0500644_0000003
664 Ga0500554_057872
665 Ga0501084_0183478
666 Ga0501084_0260552
667 Ga0501084_0408405
668 Ga0501082_0291620
669 Ga0466962_0000252
670 Ga0466962_0052113
671 Ga0530510_0086656
672 Ga0530510_0090790
673 2515857484
674 2644533678

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12802

MarR_2

MarR family

54

111

0.9

PF01047

MarR

MarR family

58

112

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1lnw-assembly4.cif.gz_H crystal structure of the mexr repressor of the mexab-oprm multidrug efflux operon of pseudomonas aeruginosa 0.8636 49 180
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.8573 78 141
6fdo-assembly1.cif.gz_A rio2 structure 0.8536 74 147
5hso-assembly1.cif.gz_D crystal structure of mycobacterium tuberculosis marr family protein rv2887 complex with dna 0.8524 54 180
4zzl-assembly1.cif.gz_B mexr r21w derepressor mutant causing multidrug resistance in p. aeruginosa by mexab-oprm efflux pump expression 0.8516 49 180
ID Description Score Start End Superfamily
af_P0ACR9_12_165_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9106 34 185 1.10.10.10
af_P0ACR9_12_165_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8885 34 185 1.10.10.10
af_Q2FVA7_2_143_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.883 46 186 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8802 74 138 1.10.10.10
1s3jB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8786 74 140 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2T0N0K4-F1-model_v4 MarR family transcriptional regulator 0.9724 22 187 GO:0003677
GO:0003700
GO:0006950
AF-A0A175S3H2-F1-model_v4 MarR family transcriptional regulator 0.9652 24 186 GO:0003677
GO:0003700
GO:0006950
AF-A0A2W1U5G2-F1-model_v4 MarR family transcriptional regulator 0.9638 24 186 GO:0003677
GO:0003700
GO:0006950
AF-A0A6G6W328-F1-model_v4 MarR family transcriptional regulator 0.9587 25 181 GO:0003700
GO:0006950
AF-A0A175S3H2-F1-model_v4 MarR family transcriptional regulator 0.9538 24 186 GO:0003677
GO:0003700
GO:0006950

Map