F413291

General Info

Members Datasets Scaffolds Average Seq Length
337 214 674 150

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_000072|Ga0500618_000072_51069_51599
Length 176
Sequence LRGGILTVPAAAIPGLAKRRMPQAFGSFPMSKTIFILNGPNLNLLGQREPHIYGSTTLDEIRGQCIKVAGDLGFDVDFRQSNFEGELIESVHQARNASCGIIINPAAYTFTSIALLDALKTYDPPKIELHISNVHARESIYHNSLISRVATAIMIGFGADGYGLAIQAMARFVKPR

Samples

Sample ID Description Type Environment
1 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
23 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
24 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
58 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
68 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
69 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
96 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
99 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
100 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
101 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
102 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
103 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
104 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
105 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
106 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
107 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
113 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
114 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
120 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
121 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
126 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
127 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
131 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
132 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
133 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
134 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
135 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
136 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
137 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
138 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
139 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
142 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
147 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
150 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
153 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
154 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
155 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
158 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
159 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
160 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
163 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
166 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
167 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
168 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
169 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
170 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
171 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
172 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
173 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
174 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
175 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
176 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
177 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
178 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
179 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
180 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
181 2643221733 Bosea sp. Root381 Isolate Unclassified
182 2718217927 Rhizobium sp. N324 Isolate Nodule
183 2718218423 Rhizobium sp. N941 Isolate Nodule
184 2721755809 Rhizobium sp. N541 Isolate Nodule
185 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
186 2791355267 Rhizobium sp. L18 Isolate Nodule
187 2802429633 Rhizobium anhuiense J3 Isolate Nodule
188 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
189 2802429637 Rhizobium anhuiense C15 Isolate Nodule
190 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
191 2818991467 Bosea vestrisii 3192 Isolate Unclassified
192 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
193 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
194 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
195 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
196 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
197 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
198 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
199 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
200 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
201 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
202 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
203 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
204 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
205 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
206 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
207 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
208 8005258706 Rhizobium sp. R693 Isolate Nodule
209 8005275841 Rhizobium sp. N4311 Isolate Nodule
210 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
211 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
212 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
213 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
214 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.76
Metatranscriptomes 0.3
Isolates 13.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 40.65
Nodule 6.82
Rhizoplane 0.3
Rhizosphere 35.31
Stem 0
Stem Tuber 0
Unclassified 1.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500618_000072 3300053125 Bacteria 83424
2 JGI25158J39367_1002033 3300002739 Bacteria 3402
3 JGI25152J39213_1000009 3300002773 Bacteria 138285
4 JGI25152J39213_1008190 3300002773 Bacteria 2619
5 JGI25150J39212_1000016 3300002774 Bacteria 153945
6 JGI25150J39212_1037056 3300002774 Bacteria 644
7 JGI25159J45721_1000115 3300002987 Bacteria 38259
8 JGI25159J45721_1010947 3300002987 Bacteria 2261
9 JGI25151J46595_10000073 3300003187 Bacteria 136684
10 JGI25151J46595_10002825 3300003187 Bacteria 10028
11 JGI25151J46595_10004554 3300003187 Bacteria 7307
12 JGI25151J46595_10005108 3300003187 Bacteria 6818
13 JGI25151J46595_10119156 3300003187 Bacteria 675
14 JGI25153J46596_10000545 3300003215 Bacteria 23503
15 JGI25153J46596_10001146 3300003215 Bacteria 16038
16 JGI25153J46596_10016723 3300003215 Bacteria 2923
17 rootH1_10285516 3300003323 Bacteria 2190
18 JGI25160J50197_1001463 3300003354 Bacteria 11772
19 JGI25160J50197_1007943 3300003354 Bacteria 4086
20 JGI25161J50226_1000067 3300003374 Bacteria 90681
21 JGI25161J50226_1005520 3300003374 Bacteria 2437
22 Ga0055526_1000450 3300003771 Bacteria 32770
23 Ga0055526_1004190 3300003771 Bacteria 8766
24 Ga0055524_1000657 3300003775 Bacteria 24423
25 Ga0055524_1003917 3300003775 Bacteria 7052
26 Ga0055524_1023321 3300003775 Bacteria 1996
27 Ga0055528_1000891 3300003790 Bacteria 20163
28 Ga0055528_1007322 3300003790 Bacteria 4896
29 Ga0055528_1020044 3300003790 Bacteria 2186
30 Ga0055530_10085864 3300003791 Bacteria 653
31 Ga0055540_1000050 3300003792 Bacteria 145565
32 Ga0055540_1010335 3300003792 Bacteria 3117
33 Ga0055540_1026089 3300003792 Bacteria 1419
34 Ga0055540_1051586 3300003792 Bacteria 847
35 Ga0055531_10014760 3300003794 Bacteria 3495
36 Ga0055543_1000399 3300004625 Bacteria 27765
37 Ga0055543_1000831 3300004625 Bacteria 15046
38 Ga0065165_1000393 3300005262 Bacteria 71081
39 Ga0065165_1004649 3300005262 Bacteria 8317
40 Ga0065165_1045059 3300005262 Bacteria 1286
41 Ga0065165_1054763 3300005262 Bacteria 1116
42 Ga0070670_100009738 3300005331 Bacteria 8206
43 Ga0070670_100029693 3300005331 Bacteria 4708
44 Ga0070670_100056615 3300005331 Bacteria 3364
45 Ga0070670_100089390 3300005331 Bacteria 2647
46 Ga0070668_100030493 3300005347 Bacteria 4099
47 Ga0070669_100013647 3300005353 Bacteria 5775
48 Ga0070675_100023614 3300005354 Bacteria 4919
49 Ga0070675_100226211 3300005354 Bacteria 1631
50 Ga0070671_100004013 3300005355 Bacteria 11600
51 Ga0070674_100817477 3300005356 Bacteria 806
52 Ga0070673_100253389 3300005364 Bacteria 1535
53 Ga0070659_100877115 3300005366 Bacteria 783
54 Ga0070713_100446738 3300005436 Bacteria 1214
55 Ga0070662_100059210 3300005457 Bacteria 2790
56 Ga0068867_100206535 3300005459 Bacteria 1575
57 Ga0070672_100000651 3300005543 Bacteria 20295
58 Ga0070665_100129106 3300005548 Bacteria 2530
59 Ga0068856_100474695 3300005614 Bacteria 1271
60 Ga0068864_100014385 3300005618 Bacteria 6571
61 Ga0068864_100191309 3300005618 Bacteria 1876
62 Ga0068864_100669386 3300005618 Unclassified 1012
63 Ga0068861_100034368 3300005719 Bacteria 3749
64 Ga0068870_10336563 3300005840 Bacteria 964
65 Ga0068863_100010812 3300005841 Bacteria 8850
66 Ga0068863_100744088 3300005841 Unclassified 976
67 Ga0068862_100319557 3300005844 Bacteria 1432
68 Ga0068862_101184677 3300005844 Bacteria 762
69 Ga0081540_1000433 3300005983 Bacteria 41246
70 Ga0075365_10147350 3300006038 Bacteria 1636
71 Ga0075365_10158223 3300006038 Bacteria 1577
72 Ga0075365_10316666 3300006038 Bacteria 1099
73 Ga0075368_10116628 3300006042 Bacteria 1104
74 Ga0075363_100061022 3300006048 Bacteria 2031
75 Ga0075364_10000976 3300006051 Bacteria 15090
76 Ga0075364_10127538 3300006051 Bacteria 1706
77 Ga0070716_100056515 3300006173 Bacteria 2251
78 Ga0070712_100159773 3300006175 Bacteria 1739
79 Ga0075362_10004629 3300006177 Bacteria 4960
80 Ga0075367_10012195 3300006178 Bacteria 4572
81 Ga0075367_10280808 3300006178 Bacteria 1047
82 Ga0075369_10049428 3300006186 Bacteria 1817
83 Ga0075369_10094055 3300006186 Bacteria 1339
84 Ga0075369_10262386 3300006186 Bacteria 803
85 Ga0075369_10311141 3300006186 Bacteria 736
86 Ga0075366_10070058 3300006195 Bacteria 2088
87 Ga0075366_10749026 3300006195 Bacteria 607
88 Ga0097621_100745917 3300006237 Bacteria 904
89 Ga0075370_10001098 3300006353 Bacteria 11295
90 Ga0075370_10064819 3300006353 Bacteria 2084
91 Ga0105249_11018896 3300009553 Bacteria 897
92 Ga0157374_10131776 3300013296 Bacteria 2420
93 Ga0157375_10017897 3300013308 Bacteria 6409
94 Ga0163163_10004624 3300014325 Bacteria 11756
95 Ga0163163_10933984 3300014325 Bacteria 931
96 Ga0157376_10056125 3300014969 Bacteria 3289
97 Ga0157376_10897998 3300014969 Bacteria 904
98 Ga0163161_10176127 3300017792 Bacteria 1637
99 Ga0213875_10002492 3300021388 Bacteria 10999
100 Ga0213875_10103412 3300021388 Bacteria 1329
101 Ga0224712_10129489 3300022467 Bacteria 1101
102 Ga0209436_100019 3300025208 Bacteria 112688
103 Ga0207425_1000054 3300025245 Bacteria 153997
104 Ga0207425_1003277 3300025245 Bacteria 5268
105 Ga0207425_1024070 3300025245 Bacteria 1268
106 Ga0209129_1000108 3300025258 Bacteria 153997
107 Ga0209129_1001016 3300025258 Bacteria 16716
108 Ga0209129_1007552 3300025258 Bacteria 3209
109 Ga0209129_1047964 3300025258 Bacteria 658
110 Ga0209673_1000291 3300025273 Bacteria 93803
111 Ga0209673_1000738 3300025273 Bacteria 45021
112 Ga0209673_1002286 3300025273 Bacteria 13688
113 Ga0209130_1000061 3300025284 Bacteria 200990
114 Ga0209130_1000066 3300025284 Bacteria 192626
115 Ga0209675_1039701 3300025291 Bacteria 1040
116 Ga0209676_1009156 3300025292 Bacteria 4308
117 Ga0209676_1062950 3300025292 Bacteria 914
118 Ga0209676_1066107 3300025292 Bacteria 878
119 Ga0209676_1112525 3300025292 Bacteria 560
120 Ga0209025_1000044 3300025294 Bacteria 349480
121 Ga0209025_1000189 3300025294 Bacteria 153997
122 Ga0209025_1000430 3300025294 Bacteria 83230
123 Ga0209025_1004043 3300025294 Bacteria 13130
124 Ga0209564_1000520 3300025295 Bacteria 62968
125 Ga0209564_1000992 3300025295 Bacteria 35457
126 Ga0209758_1000162 3300025297 Bacteria 153997
127 Ga0209758_1000490 3300025297 Bacteria 64714
128 Ga0209758_1002174 3300025297 Bacteria 20609
129 Ga0209758_1004430 3300025297 Bacteria 11698
130 Ga0209758_1010291 3300025297 Bacteria 5624
131 Ga0209758_1068561 3300025297 Bacteria 1128
132 Ga0209050_1005336 3300025298 Bacteria 8140
133 Ga0209256_1000128 3300025299 Bacteria 163833
134 Ga0209256_1001383 3300025299 Bacteria 25355
135 Ga0209256_1014286 3300025299 Bacteria 2868
136 Ga0209256_1042639 3300025299 Bacteria 1144
137 Ga0209256_1074802 3300025299 Bacteria 753
138 Ga0207426_1000008 3300025302 Bacteria 848730
139 Ga0207426_1000075 3300025302 Bacteria 321337
140 Ga0207426_1027685 3300025302 Bacteria 1885
141 Ga0209051_1000249 3300025303 Bacteria 90988
142 Ga0209051_1002133 3300025303 Bacteria 14736
143 Ga0209051_1004236 3300025303 Bacteria 8942
144 Ga0209051_1046995 3300025303 Bacteria 1479
145 Ga0209257_1031877 3300025304 Bacteria 1679
146 Ga0209257_1046456 3300025304 Bacteria 1254
147 Ga0209257_1057736 3300025304 Bacteria 1066
148 Ga0207681_10019891 3300025923 Bacteria 4251
149 Ga0207650_10011786 3300025925 Bacteria 6027
150 Ga0207650_10043460 3300025925 Bacteria 3298
151 Ga0207650_10100714 3300025925 Bacteria 2223
152 Ga0207659_10068221 3300025926 Bacteria 2586
153 Ga0207700_10364311 3300025928 Bacteria 1261
154 Ga0207644_11070378 3300025931 Unclassified 677
155 Ga0207665_10072941 3300025939 Bacteria 2346
156 Ga0207691_10002236 3300025940 Bacteria 18957
157 Ga0207679_10064820 3300025945 Bacteria 2732
158 Ga0207668_10014935 3300025972 Bacteria 4816
159 Ga0207658_10479562 3300025986 Bacteria 1105
160 Ga0207677_11380807 3300026023 Bacteria 648
161 Ga0207708_10095275 3300026075 Bacteria 2299
162 Ga0207702_10185153 3300026078 Bacteria 1920
163 Ga0207641_10013884 3300026088 Bacteria 6606
164 Ga0207641_10475822 3300026088 Bacteria 1210
165 Ga0207648_10234552 3300026089 Bacteria 1633
166 Ga0207676_10016696 3300026095 Bacteria 5317
167 Ga0207676_10098923 3300026095 Bacteria 2413
168 Ga0207676_10165616 3300026095 Bacteria 1920
169 Ga0207675_100050344 3300026118 Bacteria 3887
170 Ga0207698_10736827 3300026142 Bacteria 983
171 Ga0268266_10637438 3300028379 Bacteria 1025
172 Ga0268265_10028738 3300028380 Bacteria 3985
173 Ga0268265_10965510 3300028380 Bacteria 840
174 Ga0268264_10026116 3300028381 Bacteria 4770
175 Ga0307406_10307141 3300031901 Bacteria 1221
176 Ga0307412_10063448 3300031911 Bacteria 2492
177 Ga0436364_0571203 3300037853 Bacteria 708
178 Ga0436364_0780058 3300037853 Bacteria 25161
179 Ga0436364_0788237 3300037853 Bacteria 24655
180 Ga0436364_0872542 3300037853 Bacteria 6827
181 Ga0237819_19513 3300038705 Bacteria 719
182 Ga0436365_0517305 3300039437 Bacteria 553
183 Ga0436360_0086332 3300039438 Bacteria 1567
184 Ga0436361_0959883 3300039447 Bacteria 3673
185 Ga0436363_0572005 3300039450 Bacteria 767
186 Ga0436363_1007913 3300039450 Bacteria 1408
187 Ga0436362_1286931 3300039453 Bacteria 1511
188 Ga0439465_0052736 3300041413 Bacteria 1335
189 Ga0439465_0090790 3300041413 Bacteria 1045
190 Ga0451853_1318595 3300041512 Bacteria 954
191 Ga0439435_0249641 3300042436 Bacteria 597
192 Ga0495617_187601 3300046452 Bacteria 649
193 Ga0495638_0000220 3300046460 Bacteria 79594
194 Ga0495638_0016008 3300046460 Bacteria 5026
195 Ga0495605_0007389 3300046474 Bacteria 6237
196 Ga0495584_0209097 3300046491 Bacteria 992
197 Ga0495584_0605112 3300046491 Unclassified 559
198 Ga0495596_0242694 3300046500 Bacteria 699
199 Ga0495607_0019207 3300046501 Bacteria 4344
200 Ga0495583_0033217 3300046506 Bacteria 2482
201 Ga0495610_0157328 3300046512 Bacteria 964
202 Ga0495616_0147606 3300046513 Bacteria 1066
203 Ga0495620_0069891 3300046515 Bacteria 1439
204 Ga0495620_0141060 3300046515 Bacteria 942
205 Ga0495631_0002135 3300046518 Bacteria 11444
206 Ga0495632_0000416 3300046519 Bacteria 40411
207 Ga0495632_0098434 3300046519 Bacteria 1380
208 Ga0495643_0069239 3300046522 Bacteria 1855
209 Ga0495654_0081127 3300046530 Bacteria 1521
210 Ga0495654_0367547 3300046530 Bacteria 576
211 Ga0495609_0087293 3300046538 Bacteria 1359
212 Ga0495668_0254943 3300046616 Bacteria 960
213 Ga0495611_0073301 3300046648 Bacteria 1567
214 Ga0495625_0001563 3300046660 Bacteria 27247
215 Ga0495625_0112588 3300046660 Bacteria 1859
216 Ga0495671_0161396 3300046692 Bacteria 1090
217 Ga0495636_0009244 3300047318 Bacteria 3881
218 Ga0495672_0005345 3300047320 Bacteria 10217
219 Ga0495626_0075542 3300048091 Bacteria 1506
220 Ga0496112_0931650 3300048915 Bacteria 790
221 Ga0496116_0011707 3300048919 Bacteria 7229
222 Ga0496116_0094406 3300048919 Bacteria 1808
223 Ga0496116_0164914 3300048919 Bacteria 1209
224 Ga0496117_0000434 3300048920 Bacteria 69571
225 Ga0496117_0017607 3300048920 Bacteria 5961
226 Ga0496117_0064749 3300048920 Bacteria 2490
227 Ga0496118_0016193 3300048921 Bacteria 6853
228 Ga0496118_0032282 3300048921 Bacteria 4318
229 Ga0496119_0139074 3300048922 Bacteria 1313
230 Ga0496120_0024362 3300048923 Bacteria 3775
231 Ga0496121_0000174 3300048924 Bacteria 143186
232 Ga0496121_0002071 3300048924 Bacteria 31756
233 Ga0496121_0843213 3300048924 Bacteria 534
234 Ga0496121_0872179 3300048924 Bacteria 521
235 Ga0496122_0001470 3300048925 Bacteria 37937
236 Ga0496122_0107987 3300048925 Bacteria 1837
237 Ga0496122_0184304 3300048925 Bacteria 1240
238 Ga0496123_0000018 3300048926 Bacteria 404553
239 Ga0496123_0000022 3300048926 Bacteria 361832
240 Ga0496123_0013579 3300048926 Bacteria 6820
241 Ga0496123_0033008 3300048926 Bacteria 3733
242 Ga0496123_0039205 3300048926 Bacteria 3316
243 Ga0496124_0000094 3300048927 Bacteria 189147
244 Ga0496124_0000200 3300048927 Bacteria 117910
245 Ga0496124_0003927 3300048927 Bacteria 17758
246 Ga0496125_0000215 3300048928 Bacteria 118487
247 Ga0496125_0000982 3300048928 Bacteria 44569
248 Ga0496125_0053921 3300048928 Bacteria 3291
249 Ga0496125_0554436 3300048928 Bacteria 636
250 Ga0496126_0096811 3300048929 Bacteria 2587
251 Ga0496126_0195592 3300048929 Bacteria 1710
252 Ga0496126_1188239 3300048929 Bacteria 561
253 Ga0495678_015414 3300049459 Bacteria 3517
254 Ga0495682_0025366 3300049460 Bacteria 2207
255 Ga0501034_0096810 3300049571 Bacteria 2947
256 Ga0501037_0031525 3300049573 Bacteria 3914
257 Ga0501038_0377125 3300049574 Bacteria 1101
258 nmdc:mga03683_491410_c1 3300050489 Bacteria 594
259 nmdc:mga03n38_157149_c1 3300050490 Bacteria 1149
260 nmdc:mga03n38_44741_c1 3300050490 Bacteria 1946
261 nmdc:mga00v17_31815_c2 3300050491 Bacteria 2605
262 nmdc:mga0yw44_3648_c1 3300050492 Bacteria 1604
263 nmdc:mga0yw44_66334_c1 3300050492 Bacteria 2227
264 nmdc:mga0k408_195475_c1 3300050493 Bacteria 1207
265 nmdc:mga0k408_45896_c1 3300050493 Bacteria 2522
266 nmdc:mga06z11_169470_c1 3300050494 Bacteria 1253
267 nmdc:mga06z11_52321_c1 3300050494 Bacteria 2094
268 nmdc:mga04h51_66941_c1 3300050495 Bacteria 1245
269 nmdc:mga07m45_17428_c1 3300050496 Bacteria 3156
270 nmdc:mga0sz30_103387_c1 3300050516 Bacteria 1245
271 nmdc:mga0sz30_15981_c1 3300050516 Bacteria 2972
272 nmdc:mga0sz30_20577_c1 3300050516 Bacteria 2662
273 nmdc:mga0sz30_283237_c1 3300050516 Bacteria 738
274 Ga0500610_0012638 3300053079 Bacteria 3898
275 Ga0500644_0039626 3300053088 Bacteria 1554
276 Ga0500557_000958 3300053105 Bacteria 4326
277 Ga0500594_0001384 3300053118 Bacteria 5262
278 Ga0500618_002852 3300053125 Bacteria 6201
279 Ga0500642_0206450 3300053130 Bacteria 913
280 Ga0500655_060049 3300053133 Bacteria 765
281 Ga0500568_0000227 3300053139 Bacteria 48279
282 Ga0500568_0111232 3300053139 Bacteria 1024
283 Ga0500568_0150342 3300053139 Bacteria 862
284 Ga0500573_0003267 3300053140 Bacteria 8357
285 Ga0500573_0006740 3300053140 Bacteria 6231
286 Ga0500588_0053394 3300053146 Bacteria 1269
287 Ga0500616_0004505 3300053153 Bacteria 9892
288 Ga0500622_0002549 3300053156 Bacteria 13052
289 Ga0500627_0060870 3300053158 Bacteria 1661
290 Ga0500599_055910 3300053736 Bacteria 634
291 2509385849 2509276021 Bacteria 7634384
292 2513869998 2513237138 Bacteria 7368160
293 2517410726 2517287029 Bacteria 6905599
294 2530644391 2529292951 Bacteria 6916614
295 2535519929 2534681796 Bacteria 7146037
296 2585233227 2582581299 Bacteria 6518058
297 2585255823 2582581304 Bacteria 5831370
298 2585401823 2582581867 Bacteria 7184437
299 2585542430 2585427528 Bacteria 6842387
300 2585820211 2585427590 Bacteria 6824633
301 2585841902 2585427593 Bacteria 7141551
302 2585847631 2585427594 Bacteria 6180594
303 2586004372 2585427634 Bacteria 6455027
304 2644728933 2643221733 Bacteria 5690728
305 2719388315 2718217927 Bacteria 6972593
306 2721402938 2718218423 Bacteria 6438183
307 2724035295 2721755809 Bacteria 6438790
308 2739038440 2738541333 Bacteria 7106503
309 2793366678 2791355267 Bacteria 7222458
310 2806048776 2802429633 Bacteria 7341974
311 2806070230 2802429636 Bacteria 7597525
312 2806077216 2802429637 Bacteria 7067217
313 2819686897 2818991461 Bacteria 7026071
314 2819721081 2818991467 Bacteria 5893227
315 2821128953 2821123053 Bacteria 7836056
316 2838742268 2838736955 Bacteria 5760694
317 2841846124 2841840854 Bacteria 5761912
318 2841869648 2841864319 Bacteria 6742987
319 2842145828 2842140634 Bacteria 5759631
320 2842396766 2842395702 Bacteria 6780583
321 2857536390 2857531043 Bacteria 6754041
322 2891376674 2891373044 Bacteria 5202277
323 2917699726 2917699015 Bacteria 7043791
324 2919176155 2919171160 Bacteria 6499771
325 2919455089 2919450847 Bacteria 5631160
326 2923562060 2923556063 Bacteria 6793593
327 2929143778 2929138655 Bacteria 5810547
328 3003671992 3003665799 Bacteria 7279786
329 3005413722 3005409236 Bacteria 7188837
330 8001847059 8001845381 Bacteria 5804942
331 8005258990 8005258706 Bacteria 6184835
332 8005277031 8005275841 Bacteria 6929066
333 8005547655 8005542996 Bacteria 7077758
334 8005572541 8005570704 Bacteria 6957481
335 8005696948 8005695170 Bacteria 6912330
336 8056375290 8056375014 Bacteria 7006639
337 8057533787 8057529695 Bacteria 6306553
338 Ga0500618_000072
339 JGI25158J39367_1002033
340 JGI25152J39213_1000009
341 JGI25152J39213_1008190
342 JGI25150J39212_1000016
343 JGI25150J39212_1037056
344 JGI25159J45721_1000115
345 JGI25159J45721_1010947
346 JGI25151J46595_10000073
347 JGI25151J46595_10002825
348 JGI25151J46595_10004554
349 JGI25151J46595_10005108
350 JGI25151J46595_10119156
351 JGI25153J46596_10000545
352 JGI25153J46596_10001146
353 JGI25153J46596_10016723
354 rootH1_10285516
355 JGI25160J50197_1001463
356 JGI25160J50197_1007943
357 JGI25161J50226_1000067
358 JGI25161J50226_1005520
359 Ga0055526_1000450
360 Ga0055526_1004190
361 Ga0055524_1000657
362 Ga0055524_1003917
363 Ga0055524_1023321
364 Ga0055528_1000891
365 Ga0055528_1007322
366 Ga0055528_1020044
367 Ga0055530_10085864
368 Ga0055540_1000050
369 Ga0055540_1010335
370 Ga0055540_1026089
371 Ga0055540_1051586
372 Ga0055531_10014760
373 Ga0055543_1000399
374 Ga0055543_1000831
375 Ga0065165_1000393
376 Ga0065165_1004649
377 Ga0065165_1045059
378 Ga0065165_1054763
379 Ga0070670_100009738
380 Ga0070670_100029693
381 Ga0070670_100056615
382 Ga0070670_100089390
383 Ga0070668_100030493
384 Ga0070669_100013647
385 Ga0070675_100023614
386 Ga0070675_100226211
387 Ga0070671_100004013
388 Ga0070674_100817477
389 Ga0070673_100253389
390 Ga0070659_100877115
391 Ga0070713_100446738
392 Ga0070662_100059210
393 Ga0068867_100206535
394 Ga0070672_100000651
395 Ga0070665_100129106
396 Ga0068856_100474695
397 Ga0068864_100014385
398 Ga0068864_100191309
399 Ga0068864_100669386
400 Ga0068861_100034368
401 Ga0068870_10336563
402 Ga0068863_100010812
403 Ga0068863_100744088
404 Ga0068862_100319557
405 Ga0068862_101184677
406 Ga0081540_1000433
407 Ga0075365_10147350
408 Ga0075365_10158223
409 Ga0075365_10316666
410 Ga0075368_10116628
411 Ga0075363_100061022
412 Ga0075364_10000976
413 Ga0075364_10127538
414 Ga0070716_100056515
415 Ga0070712_100159773
416 Ga0075362_10004629
417 Ga0075367_10012195
418 Ga0075367_10280808
419 Ga0075369_10049428
420 Ga0075369_10094055
421 Ga0075369_10262386
422 Ga0075369_10311141
423 Ga0075366_10070058
424 Ga0075366_10749026
425 Ga0097621_100745917
426 Ga0075370_10001098
427 Ga0075370_10064819
428 Ga0105249_11018896
429 Ga0157374_10131776
430 Ga0157375_10017897
431 Ga0163163_10004624
432 Ga0163163_10933984
433 Ga0157376_10056125
434 Ga0157376_10897998
435 Ga0163161_10176127
436 Ga0213875_10002492
437 Ga0213875_10103412
438 Ga0224712_10129489
439 Ga0209436_100019
440 Ga0207425_1000054
441 Ga0207425_1003277
442 Ga0207425_1024070
443 Ga0209129_1000108
444 Ga0209129_1001016
445 Ga0209129_1007552
446 Ga0209129_1047964
447 Ga0209673_1000291
448 Ga0209673_1000738
449 Ga0209673_1002286
450 Ga0209130_1000061
451 Ga0209130_1000066
452 Ga0209675_1039701
453 Ga0209676_1009156
454 Ga0209676_1062950
455 Ga0209676_1066107
456 Ga0209676_1112525
457 Ga0209025_1000044
458 Ga0209025_1000189
459 Ga0209025_1000430
460 Ga0209025_1004043
461 Ga0209564_1000520
462 Ga0209564_1000992
463 Ga0209758_1000162
464 Ga0209758_1000490
465 Ga0209758_1002174
466 Ga0209758_1004430
467 Ga0209758_1010291
468 Ga0209758_1068561
469 Ga0209050_1005336
470 Ga0209256_1000128
471 Ga0209256_1001383
472 Ga0209256_1014286
473 Ga0209256_1042639
474 Ga0209256_1074802
475 Ga0207426_1000008
476 Ga0207426_1000075
477 Ga0207426_1027685
478 Ga0209051_1000249
479 Ga0209051_1002133
480 Ga0209051_1004236
481 Ga0209051_1046995
482 Ga0209257_1031877
483 Ga0209257_1046456
484 Ga0209257_1057736
485 Ga0207681_10019891
486 Ga0207650_10011786
487 Ga0207650_10043460
488 Ga0207650_10100714
489 Ga0207659_10068221
490 Ga0207700_10364311
491 Ga0207644_11070378
492 Ga0207665_10072941
493 Ga0207691_10002236
494 Ga0207679_10064820
495 Ga0207668_10014935
496 Ga0207658_10479562
497 Ga0207677_11380807
498 Ga0207708_10095275
499 Ga0207702_10185153
500 Ga0207641_10013884
501 Ga0207641_10475822
502 Ga0207648_10234552
503 Ga0207676_10016696
504 Ga0207676_10098923
505 Ga0207676_10165616
506 Ga0207675_100050344
507 Ga0207698_10736827
508 Ga0268266_10637438
509 Ga0268265_10028738
510 Ga0268265_10965510
511 Ga0268264_10026116
512 Ga0307406_10307141
513 Ga0307412_10063448
514 Ga0436364_0571203
515 Ga0436364_0780058
516 Ga0436364_0788237
517 Ga0436364_0872542
518 Ga0237819_19513
519 Ga0436365_0517305
520 Ga0436360_0086332
521 Ga0436361_0959883
522 Ga0436363_0572005
523 Ga0436363_1007913
524 Ga0436362_1286931
525 Ga0439465_0052736
526 Ga0439465_0090790
527 Ga0451853_1318595
528 Ga0439435_0249641
529 Ga0495617_187601
530 Ga0495638_0000220
531 Ga0495638_0016008
532 Ga0495605_0007389
533 Ga0495584_0209097
534 Ga0495584_0605112
535 Ga0495596_0242694
536 Ga0495607_0019207
537 Ga0495583_0033217
538 Ga0495610_0157328
539 Ga0495616_0147606
540 Ga0495620_0069891
541 Ga0495620_0141060
542 Ga0495631_0002135
543 Ga0495632_0000416
544 Ga0495632_0098434
545 Ga0495643_0069239
546 Ga0495654_0081127
547 Ga0495654_0367547
548 Ga0495609_0087293
549 Ga0495668_0254943
550 Ga0495611_0073301
551 Ga0495625_0001563
552 Ga0495625_0112588
553 Ga0495671_0161396
554 Ga0495636_0009244
555 Ga0495672_0005345
556 Ga0495626_0075542
557 Ga0496112_0931650
558 Ga0496116_0011707
559 Ga0496116_0094406
560 Ga0496116_0164914
561 Ga0496117_0000434
562 Ga0496117_0017607
563 Ga0496117_0064749
564 Ga0496118_0016193
565 Ga0496118_0032282
566 Ga0496119_0139074
567 Ga0496120_0024362
568 Ga0496121_0000174
569 Ga0496121_0002071
570 Ga0496121_0843213
571 Ga0496121_0872179
572 Ga0496122_0001470
573 Ga0496122_0107987
574 Ga0496122_0184304
575 Ga0496123_0000018
576 Ga0496123_0000022
577 Ga0496123_0013579
578 Ga0496123_0033008
579 Ga0496123_0039205
580 Ga0496124_0000094
581 Ga0496124_0000200
582 Ga0496124_0003927
583 Ga0496125_0000215
584 Ga0496125_0000982
585 Ga0496125_0053921
586 Ga0496125_0554436
587 Ga0496126_0096811
588 Ga0496126_0195592
589 Ga0496126_1188239
590 Ga0495678_015414
591 Ga0495682_0025366
592 Ga0501034_0096810
593 Ga0501037_0031525
594 Ga0501038_0377125
595 nmdc:mga03683_491410_c1
596 nmdc:mga03n38_157149_c1
597 nmdc:mga03n38_44741_c1
598 nmdc:mga00v17_31815_c2
599 nmdc:mga0yw44_3648_c1
600 nmdc:mga0yw44_66334_c1
601 nmdc:mga0k408_195475_c1
602 nmdc:mga0k408_45896_c1
603 nmdc:mga06z11_169470_c1
604 nmdc:mga06z11_52321_c1
605 nmdc:mga04h51_66941_c1
606 nmdc:mga07m45_17428_c1
607 nmdc:mga0sz30_103387_c1
608 nmdc:mga0sz30_15981_c1
609 nmdc:mga0sz30_20577_c1
610 nmdc:mga0sz30_283237_c1
611 Ga0500610_0012638
612 Ga0500644_0039626
613 Ga0500557_000958
614 Ga0500594_0001384
615 Ga0500618_002852
616 Ga0500642_0206450
617 Ga0500655_060049
618 Ga0500568_0000227
619 Ga0500568_0111232
620 Ga0500568_0150342
621 Ga0500573_0003267
622 Ga0500573_0006740
623 Ga0500588_0053394
624 Ga0500616_0004505
625 Ga0500622_0002549
626 Ga0500627_0060870
627 Ga0500599_055910
628 2509385849
629 2513869998
630 2517410726
631 2530644391
632 2535519929
633 2585233227
634 2585255823
635 2585401823
636 2585542430
637 2585820211
638 2585841902
639 2585847631
640 2586004372
641 2644728933
642 2719388315
643 2721402938
644 2724035295
645 2739038440
646 2793366678
647 2806048776
648 2806070230
649 2806077216
650 2819686897
651 2819721081
652 2821128953
653 2838742268
654 2841846124
655 2841869648
656 2842145828
657 2842396766
658 2857536390
659 2891376674
660 2917699726
661 2919176155
662 2919455089
663 2923562060
664 2929143778
665 3003671992
666 3005413722
667 8001847059
668 8005258990
669 8005277031
670 8005547655
671 8005572541
672 8005696948
673 8056375290
674 8057533787

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01220

DHquinase_II

Dehydroquinase class II

33

170

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gtz-assembly1.cif.gz_C structure of streptomyces coelicolor type ii dehydroquinase r23a mutant in complex with dehydroshikimate 0.9847 4 144
3n59-assembly2.cif.gz_P type ii dehydroquinase from mycobacterium tuberculosis complexed with 3-dehydroshikimate 0.9814 4 142
4ckx-assembly1.cif.gz_A structure of the mycobacterium tuberculosis type ii dehydroquinase n12s mutant (crystal form 2) 0.9813 4 142
4ki7-assembly1.cif.gz_A design and structural analysis of aromatic inhibitors of type ii dehydroquinase from mycobacterium tuberculosis - compound 41c [3-hydroxy-5-(3-nitrophenoxy)benzoic acid] 0.9796 4 142
3n59-assembly2.cif.gz_N type ii dehydroquinase from mycobacterium tuberculosis complexed with 3-dehydroshikimate 0.9794 4 142
ID Description Score Start End Superfamily
1d0iH00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9778 4 145 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9772 4 142 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.956 4 142 3.40.50.9100
1gqoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9554 4 140 3.40.50.9100
2c57B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9462 4 149 3.40.50.9100
ID Description Score Start End GO Terms
AF-A0A4Z0NWV2-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9957 2 148 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A6M1Q7C6-F1-model_v4 deleted 0.9942 27 142
AF-A0A441Z2W7-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9941 4 140 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0016020
GO:0019631
AF-A0A0Q6PVH6-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9941 7 145 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A1H7UK82-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9939 1 144 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631

Map