F413351

General Info

Members Datasets Scaffolds Average Seq Length
338 227 676 398

Family's Representative Sequence

Representative Sequence 3300005262|Ga0065165_1001406|Ga0065165_100140611
Length 353
Sequence MYAVKANPSPELLQILWDSGITHFDVASIGEVRLVARTVPGATLCFMHPVKAEEAIEEAYFTHGVRVFSLDSMEELEKIVRATRGATDLTLCVRIRVSSDLSKLSLASKFGVGPGNECTALLIAARQAADALGICFHVGSQAMSPEAYSNAMERVRTAIVEAGVTVDVIDVGGGFPSSYPGMEPPPLDRYFETIHRAFESLPVSYSAELWAEPGRALCAEYSSLIVRVERRRGAELYINDGAYGALFDAAHIGWRFPVRLLREPDSNAKDVEFSFYGPTCDDLDHMAGPFLLPADIRPGDYIEIGMLGAYGSAMRTAFNGFGTDETVIVNDEPMASLYTRVAEAAVSSNVVKL

Samples

Sample ID Description Type Environment
1 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
7 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
8 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
74 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
76 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
78 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
123 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
124 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
127 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
139 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
140 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
141 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
142 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
143 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
144 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
145 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
146 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
147 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
148 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
149 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
150 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
151 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
152 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
153 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
154 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
157 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
158 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
163 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
164 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
165 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
166 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
174 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
175 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
177 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
178 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
179 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
183 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
184 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
185 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
186 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
187 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
188 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
189 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
190 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
191 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
192 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
193 3300049777 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control Metagenome Rhizosphere
194 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
197 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
198 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
199 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
200 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
201 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
202 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
203 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
204 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
205 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
206 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
207 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
208 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
209 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
210 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
211 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
212 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
213 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
214 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
215 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
216 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
217 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
218 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
219 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
220 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
221 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
222 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
223 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
224 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
225 2928526807 Sphingomonas trueperi 1770 Isolate Rhizosphere
226 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
227 8057101203 Sphingomonas lycopersici MMSM20 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.79
Metatranscriptomes 0.89
Isolates 5.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.72
Nodule 0
Rhizoplane 1.78
Rhizosphere 73.96
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065165_1001406 3300005262 Bacteria 26221
2 JGI24739J22299_10010399 3300001989 Bacteria 3456
3 JGI24737J22298_10003561 3300001990 Bacteria 5491
4 JGI24735J21928_10008209 3300002067 Bacteria 3386
5 JGI24738J21930_10000173 3300002075 Bacteria 16437
6 JGI24749J21850_1000162 3300002076 Bacteria 10665
7 JGI24034J26672_10005535 3300002239 Bacteria 1811
8 JGI25165J46597_1000012 3300003214 Bacteria 421074
9 JGI25165J46597_1000216 3300003214 Bacteria 81261
10 Ga0055524_1000180 3300003775 Bacteria 71495
11 Ga0055536_1001142 3300003781 Bacteria 16627
12 Ga0055530_10000080 3300003791 Bacteria 82772
13 Ga0055530_10000095 3300003791 Bacteria 74707
14 Ga0055531_10000028 3300003794 Bacteria 159590
15 Ga0065165_1001188 3300005262 Bacteria 30132
16 Ga0065707_10084020 3300005295 Bacteria 7804
17 Ga0070658_10000428 3300005327 Bacteria 36510
18 Ga0070676_10000021 3300005328 Bacteria 47295
19 Ga0070683_100063507 3300005329 Bacteria 3435
20 Ga0070670_100000005 3300005331 Bacteria 351569
21 Ga0068869_100000913 3300005334 Bacteria 16999
22 Ga0070680_100115466 3300005336 Bacteria 2237
23 Ga0068868_100000098 3300005338 Bacteria 54070
24 Ga0070660_100004789 3300005339 Bacteria 9359
25 Ga0070660_100011555 3300005339 Bacteria 6283
26 Ga0070660_100140390 3300005339 Bacteria 1938
27 Ga0070668_100000006 3300005347 Bacteria 176486
28 Ga0070668_100009210 3300005347 Bacteria 7321
29 Ga0070669_100000057 3300005353 Bacteria 110803
30 Ga0070675_100009493 3300005354 Bacteria 7572
31 Ga0070673_100000003 3300005364 Bacteria 216759
32 Ga0070667_100000003 3300005367 Bacteria 447715
33 Ga0070667_100000098 3300005367 Bacteria 108706
34 Ga0070667_100002262 3300005367 Bacteria 16956
35 Ga0070663_100042764 3300005455 Bacteria 3185
36 Ga0070662_100048213 3300005457 Bacteria 3068
37 Ga0068867_100000001 3300005459 Bacteria 427563
38 Ga0068855_100000253 3300005563 Bacteria 67247
39 Ga0068855_100009507 3300005563 Bacteria 11741
40 Ga0068857_100145559 3300005577 Bacteria 2144
41 Ga0068854_100034791 3300005578 Bacteria 3522
42 Ga0068854_100051383 3300005578 Bacteria 2953
43 Ga0068854_100066954 3300005578 Bacteria 2615
44 Ga0068854_100079838 3300005578 Bacteria 2413
45 Ga0068856_100044712 3300005614 Bacteria 4359
46 Ga0068852_100000432 3300005616 Bacteria 27854
47 Ga0068852_100231703 3300005616 Bacteria 1761
48 Ga0068859_100039937 3300005617 Bacteria 4710
49 Ga0068859_100411413 3300005617 Bacteria 1449
50 Ga0068864_100000011 3300005618 Bacteria 350056
51 Ga0068864_100095406 3300005618 Bacteria 2630
52 Ga0068861_100057535 3300005719 Bacteria 2970
53 Ga0068861_100059732 3300005719 Bacteria 2920
54 Ga0068863_100049511 3300005841 Bacteria 3984
55 Ga0068863_100162718 3300005841 Bacteria 2139
56 Ga0068858_100002855 3300005842 Bacteria 17365
57 Ga0068858_100004181 3300005842 Bacteria 14205
58 Ga0068860_100000068 3300005843 Bacteria 179208
59 Ga0068860_100000164 3300005843 Bacteria 108706
60 Ga0068860_100005064 3300005843 Bacteria 13404
61 Ga0068862_100000011 3300005844 Bacteria 270105
62 Ga0068862_100000160 3300005844 Bacteria 74917
63 Ga0068862_100000179 3300005844 Bacteria 69539
64 Ga0068865_100000011 3300006881 Bacteria 154581
65 Ga0097620_100039937 3300006931 Bacteria 4710
66 Ga0097620_100411413 3300006931 Bacteria 1449
67 Ga0105240_10054637 3300009093 Bacteria 5004
68 Ga0105240_10306572 3300009093 Bacteria 1815
69 Ga0105245_10000157 3300009098 Bacteria 64143
70 Ga0105245_10003985 3300009098 Bacteria 13132
71 Ga0105245_10108397 3300009098 Bacteria 2579
72 Ga0105247_10030504 3300009101 Bacteria 3268
73 Ga0105243_10000042 3300009148 Bacteria 159276
74 Ga0105242_10000294 3300009176 Bacteria 39673
75 Ga0105248_10000406 3300009177 Bacteria 49988
76 Ga0105248_10005723 3300009177 Bacteria 13646
77 Ga0105248_10010191 3300009177 Bacteria 10351
78 Ga0105248_10014837 3300009177 Bacteria 8582
79 Ga0105248_10041678 3300009177 Bacteria 5147
80 Ga0105237_10074575 3300009545 Bacteria 3385
81 Ga0105237_10094950 3300009545 Bacteria 2971
82 Ga0105238_10017223 3300009551 Bacteria 7341
83 Ga0105238_10273158 3300009551 Bacteria 1671
84 Ga0105249_10000004 3300009553 Bacteria 368014
85 Ga0105249_10238508 3300009553 Bacteria 1797
86 Ga0105239_10000742 3300010375 Bacteria 46371
87 Ga0105246_10000049 3300011119 Bacteria 46856
88 Ga0157326_1000284 3300012513 Bacteria 5914
89 Ga0157373_10003233 3300013100 Bacteria 12319
90 Ga0157373_10062283 3300013100 Bacteria 2642
91 Ga0157370_10000008 3300013104 Bacteria 240668
92 Ga0157369_10050393 3300013105 Bacteria 4510
93 Ga0157378_10000425 3300013297 Bacteria 41258
94 Ga0157378_10056713 3300013297 Bacteria 3491
95 Ga0163162_10020509 3300013306 Bacteria 6494
96 Ga0157372_10082203 3300013307 Bacteria 3646
97 Ga0157372_10192923 3300013307 Bacteria 2359
98 Ga0157375_10001834 3300013308 Bacteria 18250
99 Ga0157380_10000031 3300014326 Bacteria 90245
100 Ga0157376_10000072 3300014969 Bacteria 77631
101 Ga0163161_10214987 3300017792 Bacteria 1486
102 Ga0213875_10000077 3300021388 Bacteria 116884
103 Ga0209026_1002235 3300025250 Bacteria 7449
104 Ga0209148_1000117 3300025254 Bacteria 188938
105 Ga0209233_1000058 3300025261 Bacteria 421872
106 Ga0209233_1000079 3300025261 Bacteria 346944
107 Ga0209565_1000012 3300025263 Bacteria 606500
108 Ga0209455_1004088 3300025272 Bacteria 4910
109 Ga0209673_1004195 3300025273 Bacteria 7866
110 Ga0209675_1015227 3300025291 Bacteria 2296
111 Ga0209676_1000362 3300025292 Bacteria 85770
112 Ga0209758_1003924 3300025297 Bacteria 12969
113 Ga0209050_1000010 3300025298 Bacteria 980454
114 Ga0209050_1000728 3300025298 Bacteria 47923
115 Ga0209050_1004469 3300025298 Bacteria 9419
116 Ga0209050_1011814 3300025298 Bacteria 4088
117 Ga0209256_1000012 3300025299 Bacteria 790371
118 Ga0209257_1000009 3300025304 Bacteria 1205047
119 Ga0209257_1000487 3300025304 Bacteria 71315
120 Ga0209257_1000695 3300025304 Bacteria 52248
121 Ga0207710_10026858 3300025900 Bacteria 2489
122 Ga0207680_10057412 3300025903 Bacteria 2355
123 Ga0207647_10000200 3300025904 Bacteria 48906
124 Ga0207645_10000395 3300025907 Bacteria 35956
125 Ga0207705_10000144 3300025909 Bacteria 76661
126 Ga0207705_10000911 3300025909 Bacteria 24202
127 Ga0207705_10004361 3300025909 Bacteria 10700
128 Ga0207695_10063114 3300025913 Bacteria 3820
129 Ga0207671_10002043 3300025914 Bacteria 22165
130 Ga0207671_10147269 3300025914 Bacteria 1817
131 Ga0207660_10227128 3300025917 Bacteria 1467
132 Ga0207657_10003388 3300025919 Bacteria 17048
133 Ga0207657_10016340 3300025919 Bacteria 7161
134 Ga0207652_10052640 3300025921 Bacteria 3495
135 Ga0207681_10000001 3300025923 Bacteria 1105841
136 Ga0207681_10042167 3300025923 Bacteria 3047
137 Ga0207650_10000018 3300025925 Bacteria 352120
138 Ga0207650_10002940 3300025925 Bacteria 11754
139 Ga0207659_10066601 3300025926 Bacteria 2614
140 Ga0207687_10000354 3300025927 Bacteria 30554
141 Ga0207687_10004882 3300025927 Bacteria 8910
142 Ga0207644_10000124 3300025931 Bacteria 56579
143 Ga0207706_10002192 3300025933 Bacteria 19026
144 Ga0207706_10006864 3300025933 Bacteria 10524
145 Ga0207706_10015824 3300025933 Bacteria 6820
146 Ga0207706_10052807 3300025933 Bacteria 3588
147 Ga0207706_10354390 3300025933 Bacteria 1276
148 Ga0207686_10000312 3300025934 Bacteria 35056
149 Ga0207709_10000119 3300025935 Bacteria 121452
150 Ga0207704_10000001 3300025938 Bacteria 716296
151 Ga0207691_10101397 3300025940 Bacteria 2569
152 Ga0207691_10147040 3300025940 Bacteria 2074
153 Ga0207711_10000382 3300025941 Bacteria 46910
154 Ga0207711_10005635 3300025941 Bacteria 10582
155 Ga0207711_10026316 3300025941 Bacteria 4880
156 Ga0207711_10060512 3300025941 Bacteria 3264
157 Ga0207689_10002518 3300025942 Bacteria 17021
158 Ga0207661_10025550 3300025944 Bacteria 4491
159 Ga0207667_10000035 3300025949 Bacteria 301056
160 Ga0207667_10004593 3300025949 Bacteria 16933
161 Ga0207651_10000002 3300025960 Bacteria 427663
162 Ga0207712_10000008 3300025961 Bacteria 527957
163 Ga0207712_10187109 3300025961 Bacteria 1631
164 Ga0207668_10000026 3300025972 Bacteria 128309
165 Ga0207668_10031012 3300025972 Bacteria 3517
166 Ga0207640_10001078 3300025981 Bacteria 15115
167 Ga0207640_10004245 3300025981 Bacteria 7759
168 Ga0207640_10056808 3300025981 Bacteria 2572
169 Ga0207640_10058601 3300025981 Bacteria 2538
170 Ga0207658_10000002 3300025986 Bacteria 1364188
171 Ga0207658_10000196 3300025986 Bacteria 63933
172 Ga0207658_10001654 3300025986 Bacteria 17013
173 Ga0207677_10000042 3300026023 Bacteria 110706
174 Ga0207703_10001489 3300026035 Bacteria 21371
175 Ga0207703_10002076 3300026035 Bacteria 17618
176 Ga0207703_10020274 3300026035 Bacteria 5199
177 Ga0207678_10012180 3300026067 Bacteria 7556
178 Ga0207678_10019712 3300026067 Bacteria 5932
179 Ga0207678_10085349 3300026067 Bacteria 2699
180 Ga0207702_10004463 3300026078 Bacteria 12435
181 Ga0207702_10109660 3300026078 Bacteria 2451
182 Ga0207641_10000607 3300026088 Bacteria 39350
183 Ga0207641_10008306 3300026088 Bacteria 8579
184 Ga0207641_10159695 3300026088 Bacteria 2048
185 Ga0207648_10000001 3300026089 Bacteria 427499
186 Ga0207676_10000004 3300026095 Bacteria 725417
187 Ga0207676_10000971 3300026095 Bacteria 22156
188 Ga0207674_10037978 3300026116 Bacteria 5002
189 Ga0207675_100094084 3300026118 Bacteria 2819
190 Ga0207698_10000173 3300026142 Bacteria 40043
191 Ga0209974_10013576 3300027876 Bacteria 2713
192 Ga0268266_10000002 3300028379 Bacteria 3059047
193 Ga0268265_10000002 3300028380 Bacteria 1035381
194 Ga0268265_10000199 3300028380 Bacteria 69539
195 Ga0268265_10001260 3300028380 Bacteria 21840
196 Ga0268264_10000103 3300028381 Bacteria 222439
197 Ga0268264_10000228 3300028381 Bacteria 108722
198 Ga0268264_10000936 3300028381 Bacteria 30266
199 Ga0307513_10057153 3300031456 Bacteria 4159
200 Ga0307408_100020671 3300031548 Bacteria 4446
201 Ga0307408_100119627 3300031548 Bacteria 2038
202 Ga0307508_10025727 3300031616 Bacteria 5334
203 Ga0307405_10082944 3300031731 Bacteria 2100
204 Ga0307409_100205522 3300031995 Bacteria 1765
205 Ga0307416_100137528 3300032002 Bacteria 2213
206 Ga0307414_10001394 3300032004 Bacteria 12521
207 Ga0307414_10001763 3300032004 Bacteria 11217
208 Ga0307414_10051430 3300032004 Bacteria 2860
209 Ga0307414_10105121 3300032004 Bacteria 2134
210 Ga0307414_10300611 3300032004 Bacteria 1357
211 Ga0307411_10020951 3300032005 Bacteria 3814
212 Ga0307415_100013397 3300032126 Bacteria 4787
213 Ga0307510_10004800 3300033180 Bacteria 15995
214 Ga0395899_0002039 3300037312 Bacteria 16633
215 Ga0395899_0042812 3300037312 Bacteria 3378
216 Ga0395899_0046341 3300037312 Bacteria 3238
217 Ga0395900_0020859 3300037418 Bacteria 6695
218 Ga0395900_0058520 3300037418 Bacteria 3967
219 Ga0395900_0127719 3300037418 Bacteria 2606
220 Ga0395898_0069633 3300037466 Bacteria 3403
221 Ga0395905_0025603 3300037471 Bacteria 5563
222 Ga0395905_0029082 3300037471 Bacteria 5208
223 Ga0395905_0088789 3300037471 Bacteria 2897
224 Ga0395905_0220007 3300037471 Bacteria 1777
225 Ga0395905_0260229 3300037471 Bacteria 1620
226 Ga0436364_0024756 3300037853 Bacteria 185423
227 Ga0395901_0214304 3300038443 Bacteria 2014
228 Ga0395901_0239643 3300038443 Bacteria 1892
229 Ga0439465_0009320 3300041413 Bacteria 3093
230 Ga0451802_0237599 3300041460 Bacteria 1838
231 Ga0451806_469611 3300041462 Bacteria 2311
232 Ga0439431_0008050 3300041997 Bacteria 2362
233 Ga0439432_010322 3300042006 Bacteria 3238
234 Ga0439455_0005335 3300042012 Bacteria 2604
235 Ga0439446_0016515 3300042156 Bacteria 2057
236 Ga0439458_0005558 3300042157 Bacteria 2833
237 Ga0466961_0120497 3300044693 Bacteria 1647
238 Ga0466963_0052306 3300044694 Bacteria 2710
239 Ga0466968_0042287 3300044735 Bacteria 1926
240 Ga0466960_0012813 3300044901 Bacteria 3548
241 Ga0466959_0080427 3300045049 Bacteria 2349
242 Ga0495638_0006452 3300046460 Bacteria 8533
243 Ga0495583_0009903 3300046506 Bacteria 5637
244 Ga0495606_0111170 3300046507 Bacteria 1652
245 Ga0495668_0000001 3300046616 Bacteria 1013420
246 Ga0495668_0032457 3300046616 Bacteria 2938
247 Ga0495625_0005243 3300046660 Bacteria 11925
248 Ga0495625_0028506 3300046660 Bacteria 4187
249 Ga0495669_0053965 3300046684 Bacteria 1808
250 Ga0495670_0023583 3300046691 Bacteria 3037
251 Ga0495681_0033688 3300047470 Bacteria 2561
252 Ga0495686_0004398 3300047472 Bacteria 11610
253 Ga0495686_0011193 3300047472 Bacteria 6329
254 Ga0495686_0046813 3300047472 Bacteria 2733
255 Ga0496102_0000120 3300048905 Bacteria 112432
256 Ga0496103_0035948 3300048906 Bacteria 3032
257 Ga0496116_0101017 3300048919 Bacteria 1723
258 Ga0496117_0000317 3300048920 Bacteria 84472
259 Ga0496117_0066255 3300048920 Bacteria 2451
260 Ga0496117_0133946 3300048920 Bacteria 1496
261 Ga0496118_0000303 3300048921 Bacteria 85332
262 Ga0496118_0002976 3300048921 Bacteria 21913
263 Ga0496118_0045984 3300048921 Bacteria 3400
264 Ga0496118_0068316 3300048921 Bacteria 2582
265 Ga0496119_0066055 3300048922 Bacteria 2139
266 Ga0496120_0031207 3300048923 Bacteria 3230
267 Ga0496121_0000296 3300048924 Bacteria 103215
268 Ga0496121_0004304 3300048924 Bacteria 19288
269 Ga0496121_0094005 3300048924 Bacteria 2333
270 Ga0496121_0186580 3300048924 Bacteria 1491
271 Ga0496122_0002027 3300048925 Bacteria 30082
272 Ga0496122_0037607 3300048925 Bacteria 3893
273 Ga0496123_0007923 3300048926 Bacteria 9866
274 Ga0496124_0000214 3300048927 Bacteria 113007
275 Ga0496124_0000684 3300048927 Bacteria 55763
276 Ga0496124_0028052 3300048927 Bacteria 5039
277 Ga0496124_0179126 3300048927 Bacteria 1633
278 Ga0496125_0020684 3300048928 Bacteria 6171
279 Ga0496126_0075599 3300048929 Bacteria 2989
280 Ga0501306_004690 3300049127 Bacteria 1541
281 Ga0501305_003099 3300049161 Bacteria 1859
282 Ga0501307_002104 3300049162 Bacteria 1812
283 Ga0501290_002972 3300049513 Bacteria 2156
284 Ga0501292_000545 3300049515 Bacteria 4666
285 Ga0501294_000153 3300049517 Bacteria 8220
286 Ga0501032_0011625 3300049569 Bacteria 6312
287 Ga0501043_0147398 3300049579 Bacteria 1842
288 Ga0501047_0009249 3300049581 Bacteria 9305
289 Ga0501202_004646 3300049652 Bacteria 2407
290 Ga0501206_000949 3300049653 Bacteria 3589
291 Ga0501222_000934 3300049662 Bacteria 4204
292 Ga0501223_006338 3300049663 Bacteria 2449
293 Ga0501227_001938 3300049665 Bacteria 4598
294 Ga0501235_002297 3300049669 Bacteria 4113
295 Ga0501257_000040 3300049686 Bacteria 36614
296 Ga0501259_001110 3300049688 Bacteria 4492
297 Ga0501261_000579 3300049690 Bacteria 4647
298 Ga0501279_000030 3300049775 Bacteria 37693
299 Ga0501280_000040 3300049776 Bacteria 38251
300 Ga0501281_00057 3300049777 Bacteria 13168
301 Ga0501282_000214 3300049778 Bacteria 7167
302 Ga0501044_0062937 3300049823 Bacteria 3791
303 Ga0500643_000113 3300053087 Bacteria 84494
304 Ga0500643_001256 3300053087 Bacteria 15014
305 Ga0500643_008947 3300053087 Bacteria 3875
306 Ga0500651_0055391 3300053093 Bacteria 2484
307 Ga0500651_0158433 3300053093 Bacteria 1355
308 Ga0500566_0016727 3300053094 Bacteria 4305
309 Ga0500655_002259 3300053133 Bacteria 3538
310 Ga0500658_0000967 3300053134 Bacteria 11730
311 Ga0500573_0000045 3300053140 Bacteria 98878
312 Ga0500590_002600 3300053148 Bacteria 8083
313 Ga0500604_0041921 3300053151 Bacteria 1386
314 Ga0500616_0003989 3300053153 Bacteria 10781
315 Ga0500624_000043 3300053157 Bacteria 90095
316 Ga0500627_0000005 3300053158 Bacteria 167950
317 Ga0500627_0000209 3300053158 Bacteria 16882
318 Ga0500637_0001605 3300053178 Bacteria 9695
319 Ga0500570_000021 3300053724 Bacteria 41025
320 Ga0466962_0002546 3300061719 Bacteria 8651
321 2585260434 2582581305 Bacteria 4895574
322 2600202481 2599185354 Bacteria 4398675
323 2600227790 2599185359 Bacteria 4772316
324 2643731537 2643221541 Bacteria 5498788
325 2643821639 2643221560 Bacteria 4801179
326 2643835793 2643221563 Bacteria 4726935
327 2644036714 2643221605 Bacteria 4772303
328 2644042135 2643221606 Bacteria 5588032
329 2644056719 2643221608 Bacteria 4724829
330 2644394222 2643221671 Bacteria 5496681
331 2753764274 2751185897 Bacteria 5322941
332 2819714222 2818991466 Bacteria 4748179
333 2852655400 2852653556 Bacteria 4050083
334 2852681758 2852680915 Bacteria 4100189
335 2879166482 2879163058 Bacteria 4223965
336 2928530438 2928526807 Bacteria 4760224
337 2928968234 2928968154 Bacteria 4633371
338 8057103146 8057101203 Bacteria 5034064
339 Ga0065165_1001406
340 JGI24739J22299_10010399
341 JGI24737J22298_10003561
342 JGI24735J21928_10008209
343 JGI24738J21930_10000173
344 JGI24749J21850_1000162
345 JGI24034J26672_10005535
346 JGI25165J46597_1000012
347 JGI25165J46597_1000216
348 Ga0055524_1000180
349 Ga0055536_1001142
350 Ga0055530_10000080
351 Ga0055530_10000095
352 Ga0055531_10000028
353 Ga0065165_1001188
354 Ga0065707_10084020
355 Ga0070658_10000428
356 Ga0070676_10000021
357 Ga0070683_100063507
358 Ga0070670_100000005
359 Ga0068869_100000913
360 Ga0070680_100115466
361 Ga0068868_100000098
362 Ga0070660_100004789
363 Ga0070660_100011555
364 Ga0070660_100140390
365 Ga0070668_100000006
366 Ga0070668_100009210
367 Ga0070669_100000057
368 Ga0070675_100009493
369 Ga0070673_100000003
370 Ga0070667_100000003
371 Ga0070667_100000098
372 Ga0070667_100002262
373 Ga0070663_100042764
374 Ga0070662_100048213
375 Ga0068867_100000001
376 Ga0068855_100000253
377 Ga0068855_100009507
378 Ga0068857_100145559
379 Ga0068854_100034791
380 Ga0068854_100051383
381 Ga0068854_100066954
382 Ga0068854_100079838
383 Ga0068856_100044712
384 Ga0068852_100000432
385 Ga0068852_100231703
386 Ga0068859_100039937
387 Ga0068859_100411413
388 Ga0068864_100000011
389 Ga0068864_100095406
390 Ga0068861_100057535
391 Ga0068861_100059732
392 Ga0068863_100049511
393 Ga0068863_100162718
394 Ga0068858_100002855
395 Ga0068858_100004181
396 Ga0068860_100000068
397 Ga0068860_100000164
398 Ga0068860_100005064
399 Ga0068862_100000011
400 Ga0068862_100000160
401 Ga0068862_100000179
402 Ga0068865_100000011
403 Ga0097620_100039937
404 Ga0097620_100411413
405 Ga0105240_10054637
406 Ga0105240_10306572
407 Ga0105245_10000157
408 Ga0105245_10003985
409 Ga0105245_10108397
410 Ga0105247_10030504
411 Ga0105243_10000042
412 Ga0105242_10000294
413 Ga0105248_10000406
414 Ga0105248_10005723
415 Ga0105248_10010191
416 Ga0105248_10014837
417 Ga0105248_10041678
418 Ga0105237_10074575
419 Ga0105237_10094950
420 Ga0105238_10017223
421 Ga0105238_10273158
422 Ga0105249_10000004
423 Ga0105249_10238508
424 Ga0105239_10000742
425 Ga0105246_10000049
426 Ga0157326_1000284
427 Ga0157373_10003233
428 Ga0157373_10062283
429 Ga0157370_10000008
430 Ga0157369_10050393
431 Ga0157378_10000425
432 Ga0157378_10056713
433 Ga0163162_10020509
434 Ga0157372_10082203
435 Ga0157372_10192923
436 Ga0157375_10001834
437 Ga0157380_10000031
438 Ga0157376_10000072
439 Ga0163161_10214987
440 Ga0213875_10000077
441 Ga0209026_1002235
442 Ga0209148_1000117
443 Ga0209233_1000058
444 Ga0209233_1000079
445 Ga0209565_1000012
446 Ga0209455_1004088
447 Ga0209673_1004195
448 Ga0209675_1015227
449 Ga0209676_1000362
450 Ga0209758_1003924
451 Ga0209050_1000010
452 Ga0209050_1000728
453 Ga0209050_1004469
454 Ga0209050_1011814
455 Ga0209256_1000012
456 Ga0209257_1000009
457 Ga0209257_1000487
458 Ga0209257_1000695
459 Ga0207710_10026858
460 Ga0207680_10057412
461 Ga0207647_10000200
462 Ga0207645_10000395
463 Ga0207705_10000144
464 Ga0207705_10000911
465 Ga0207705_10004361
466 Ga0207695_10063114
467 Ga0207671_10002043
468 Ga0207671_10147269
469 Ga0207660_10227128
470 Ga0207657_10003388
471 Ga0207657_10016340
472 Ga0207652_10052640
473 Ga0207681_10000001
474 Ga0207681_10042167
475 Ga0207650_10000018
476 Ga0207650_10002940
477 Ga0207659_10066601
478 Ga0207687_10000354
479 Ga0207687_10004882
480 Ga0207644_10000124
481 Ga0207706_10002192
482 Ga0207706_10006864
483 Ga0207706_10015824
484 Ga0207706_10052807
485 Ga0207706_10354390
486 Ga0207686_10000312
487 Ga0207709_10000119
488 Ga0207704_10000001
489 Ga0207691_10101397
490 Ga0207691_10147040
491 Ga0207711_10000382
492 Ga0207711_10005635
493 Ga0207711_10026316
494 Ga0207711_10060512
495 Ga0207689_10002518
496 Ga0207661_10025550
497 Ga0207667_10000035
498 Ga0207667_10004593
499 Ga0207651_10000002
500 Ga0207712_10000008
501 Ga0207712_10187109
502 Ga0207668_10000026
503 Ga0207668_10031012
504 Ga0207640_10001078
505 Ga0207640_10004245
506 Ga0207640_10056808
507 Ga0207640_10058601
508 Ga0207658_10000002
509 Ga0207658_10000196
510 Ga0207658_10001654
511 Ga0207677_10000042
512 Ga0207703_10001489
513 Ga0207703_10002076
514 Ga0207703_10020274
515 Ga0207678_10012180
516 Ga0207678_10019712
517 Ga0207678_10085349
518 Ga0207702_10004463
519 Ga0207702_10109660
520 Ga0207641_10000607
521 Ga0207641_10008306
522 Ga0207641_10159695
523 Ga0207648_10000001
524 Ga0207676_10000004
525 Ga0207676_10000971
526 Ga0207674_10037978
527 Ga0207675_100094084
528 Ga0207698_10000173
529 Ga0209974_10013576
530 Ga0268266_10000002
531 Ga0268265_10000002
532 Ga0268265_10000199
533 Ga0268265_10001260
534 Ga0268264_10000103
535 Ga0268264_10000228
536 Ga0268264_10000936
537 Ga0307513_10057153
538 Ga0307408_100020671
539 Ga0307408_100119627
540 Ga0307508_10025727
541 Ga0307405_10082944
542 Ga0307409_100205522
543 Ga0307416_100137528
544 Ga0307414_10001394
545 Ga0307414_10001763
546 Ga0307414_10051430
547 Ga0307414_10105121
548 Ga0307414_10300611
549 Ga0307411_10020951
550 Ga0307415_100013397
551 Ga0307510_10004800
552 Ga0395899_0002039
553 Ga0395899_0042812
554 Ga0395899_0046341
555 Ga0395900_0020859
556 Ga0395900_0058520
557 Ga0395900_0127719
558 Ga0395898_0069633
559 Ga0395905_0025603
560 Ga0395905_0029082
561 Ga0395905_0088789
562 Ga0395905_0220007
563 Ga0395905_0260229
564 Ga0436364_0024756
565 Ga0395901_0214304
566 Ga0395901_0239643
567 Ga0439465_0009320
568 Ga0451802_0237599
569 Ga0451806_469611
570 Ga0439431_0008050
571 Ga0439432_010322
572 Ga0439455_0005335
573 Ga0439446_0016515
574 Ga0439458_0005558
575 Ga0466961_0120497
576 Ga0466963_0052306
577 Ga0466968_0042287
578 Ga0466960_0012813
579 Ga0466959_0080427
580 Ga0495638_0006452
581 Ga0495583_0009903
582 Ga0495606_0111170
583 Ga0495668_0000001
584 Ga0495668_0032457
585 Ga0495625_0005243
586 Ga0495625_0028506
587 Ga0495669_0053965
588 Ga0495670_0023583
589 Ga0495681_0033688
590 Ga0495686_0004398
591 Ga0495686_0011193
592 Ga0495686_0046813
593 Ga0496102_0000120
594 Ga0496103_0035948
595 Ga0496116_0101017
596 Ga0496117_0000317
597 Ga0496117_0066255
598 Ga0496117_0133946
599 Ga0496118_0000303
600 Ga0496118_0002976
601 Ga0496118_0045984
602 Ga0496118_0068316
603 Ga0496119_0066055
604 Ga0496120_0031207
605 Ga0496121_0000296
606 Ga0496121_0004304
607 Ga0496121_0094005
608 Ga0496121_0186580
609 Ga0496122_0002027
610 Ga0496122_0037607
611 Ga0496123_0007923
612 Ga0496124_0000214
613 Ga0496124_0000684
614 Ga0496124_0028052
615 Ga0496124_0179126
616 Ga0496125_0020684
617 Ga0496126_0075599
618 Ga0501306_004690
619 Ga0501305_003099
620 Ga0501307_002104
621 Ga0501290_002972
622 Ga0501292_000545
623 Ga0501294_000153
624 Ga0501032_0011625
625 Ga0501043_0147398
626 Ga0501047_0009249
627 Ga0501202_004646
628 Ga0501206_000949
629 Ga0501222_000934
630 Ga0501223_006338
631 Ga0501227_001938
632 Ga0501235_002297
633 Ga0501257_000040
634 Ga0501259_001110
635 Ga0501261_000579
636 Ga0501279_000030
637 Ga0501280_000040
638 Ga0501281_00057
639 Ga0501282_000214
640 Ga0501044_0062937
641 Ga0500643_000113
642 Ga0500643_001256
643 Ga0500643_008947
644 Ga0500651_0055391
645 Ga0500651_0158433
646 Ga0500566_0016727
647 Ga0500655_002259
648 Ga0500658_0000967
649 Ga0500573_0000045
650 Ga0500590_002600
651 Ga0500604_0041921
652 Ga0500616_0003989
653 Ga0500624_000043
654 Ga0500627_0000005
655 Ga0500627_0000209
656 Ga0500637_0001605
657 Ga0500570_000021
658 Ga0466962_0002546
659 2585260434
660 2600202481
661 2600227790
662 2643731537
663 2643821639
664 2643835793
665 2644036714
666 2644042135
667 2644056719
668 2644394222
669 2753764274
670 2819714222
671 2852655400
672 2852681758
673 2879166482
674 2928530438
675 2928968234
676 8057103146

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02784

Orn_Arg_deC_N

Pyridoxal-dependent decarboxylase, pyridoxal binding domain

1

219

0.89

PF00278

Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

59

308

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bhy-assembly1.cif.gz_A structure of alanine racemase from aeromonas hydrophila 0.6314 30 148
1wdw-assembly3.cif.gz_K structural basis of mutual activation of the tryptophan synthase a2b2 complex from a hyperthermophile, pyrococcus furiosus 0.626 46 149
7b3y-assembly1.cif.gz_B-9 structure of a nanoparticle for a covid-19 vaccine candidate 0.6246 34 149
6n2a-assembly1.cif.gz_A meso-diaminopimelate decarboxylase from arabidopsis thaliana (isoform 1) 0.6212 21 333
7ygf-assembly3.cif.gz_C crystal structure of yggs from fusobacterium nucleatum 0.609 39 195
ID Description Score Start End Superfamily
af_A0A0P0W6G1_66_221_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.8268 47 149 3.20.20.10
af_E9AGB5_265_500_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.755 43 237 3.20.20.10
af_P9WIU7_308_444_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.7523 248 339 2.40.37.10
af_Q75JL7_282_429_2.40.37.10 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.7503 239 335 2.40.37.10
3vabA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.7498 38 237 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A2A2M5E1-F1-model_v4 Orn/DAP/Arg decarboxylase 2 N-terminal domain-containing protein 0.9374 57 148 GO:0004586
GO:0005737
GO:0033387
AF-A0A2A2M5E1-F1-model_v4 Orn/DAP/Arg decarboxylase 2 N-terminal domain-containing protein 0.8402 57 148 GO:0004586
GO:0005737
GO:0033387
AF-A0A3D3SKR3-F1-model_v4 deleted 0.835 37 149
AF-J3AMS1-F1-model_v4 ornithine decarboxylase (EC 4.1.1.17) 0.8256 43 134 GO:0004586
GO:0005737
GO:0033387
AF-A0A2W5FGR0-F1-model_v4 ornithine decarboxylase (EC 4.1.1.17) 0.8253 36 149 GO:0004586
GO:0005737
GO:0033387

Map