F413586

General Info

Members Datasets Scaffolds Average Seq Length
338 205 676 570

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10001484|Ga0307414_100014849
Length 569
Sequence MEKKLRSQQWFGKKGKDGFIYRAWMKNQGIPDDEFRGKPVIGICNTWSELTPCNAHFRELAESVKRGILQAGGLPVEFPVMSLGETLIKPTAMLYRNLVSMDVEESIRANPIDGVVLMCGCDKTTPSLVMGVCSVNIPAIVVSGGAMLTGKYEGRDIGTSDIWRFSENVRSGIMTEEELNLAEAGMCRSRGHCAVMGTASSMACMVESLGLSLPENAAIPAADSNRKVLAQFSGRRIVEMVKEDLKPSDILTREAFENAIKINAVIGGSTNFVIHLLAIAGRVGVDLHISDFDRYSRNLPLLANLQPSGEYFMEDLYYSGGLPAVMKEIETRLNTGCITVNGRTIGENLQKAKVLNRKVIATLEDPFKLDSGVAVLKGNLCEGGVIKPSAADPKLMQHTGKAVVFENIEDYKIRIDDPELDIDENSIMVLKNVGPKGYPGMPEVGNMGLPKKLLDKGVTDMIRISDGRMSGTGFGTVVLHISPEAAENGTIALVKDGDLIALDVPNRTLNLLVDDEELSKRRAALVKQPEVFKRGYAKLYVQHVEQANLGADFDFLKGSSGSEVLRDSH

Samples

Sample ID Description Type Environment
1 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
20 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
21 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
79 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
81 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
82 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
123 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
124 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
125 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
126 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
127 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
128 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
131 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
132 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
133 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
134 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
135 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
136 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
137 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
138 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
139 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
143 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
144 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
145 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
146 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
147 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
148 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
149 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
150 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
151 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
152 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
153 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
154 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
155 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
156 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
157 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
160 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
172 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
178 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
179 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
180 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
181 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
184 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
185 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
186 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
187 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
188 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
189 2738541284 Pedobacter sp. YR016 Isolate Unclassified
190 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
191 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
192 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
193 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
194 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
195 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
196 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
197 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
198 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
199 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
200 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
201 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
202 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
203 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
204 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
205 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.67
Metatranscriptomes 0
Isolates 5.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.69
Nodule 0
Rhizoplane 0.3
Rhizosphere 85.8
Stem 0
Stem Tuber 0
Unclassified 2.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307414_10001484 3300032004 Bacteria 12203
2 SwRhRL2b_contig_1362779 2162886007 Bacteria 2192
3 SwRhRL2b_contig_1933315 2162886007 Bacteria 8613
4 JGI24735J21928_10000027 3300002067 Bacteria 83494
5 JGI25162J39368_1000158 3300002737 Bacteria 74916
6 JGI25165J46597_1000986 3300003214 Bacteria 19072
7 rootH2_10089470 3300003320 Bacteria 10701
8 rootL2_10002912 3300003322 Bacteria 29769
9 rootH1_10102515 3300003323 Bacteria 8322
10 JGI25160J50197_1001158 3300003354 Bacteria 13469
11 JGI25160J50197_1005706 3300003354 Bacteria 5141
12 Ga0065165_1003537 3300005262 Bacteria 10813
13 Ga0065714_10004682 3300005288 Bacteria 4601
14 Ga0065714_10004852 3300005288 Bacteria 10877
15 Ga0065714_10067157 3300005288 Bacteria 5829
16 Ga0065704_10000199 3300005289 Bacteria 297176
17 Ga0065704_10082951 3300005289 Bacteria 3530
18 Ga0065704_10092700 3300005289 Bacteria 2638
19 Ga0070658_10064332 3300005327 Bacteria 2992
20 Ga0070676_10069383 3300005328 Bacteria 2112
21 Ga0070683_100075159 3300005329 Bacteria 3157
22 Ga0070670_100055374 3300005331 Bacteria 3404
23 Ga0068869_100008903 3300005334 Bacteria 6495
24 Ga0068869_100037268 3300005334 Bacteria 3457
25 Ga0070682_100084755 3300005337 Bacteria 2060
26 Ga0068868_100003556 3300005338 Bacteria 10859
27 Ga0068868_100052359 3300005338 Bacteria 3214
28 Ga0070660_100029742 3300005339 Bacteria 4096
29 Ga0070689_100110017 3300005340 Bacteria 2190
30 Ga0070668_100032653 3300005347 Bacteria 3961
31 Ga0070668_100090082 3300005347 Bacteria 2416
32 Ga0070669_100071167 3300005353 Bacteria 2572
33 Ga0070675_100007800 3300005354 Bacteria 8291
34 Ga0070671_100004338 3300005355 Bacteria 11224
35 Ga0070671_100018778 3300005355 Bacteria 5619
36 Ga0070659_100061402 3300005366 Bacteria 2970
37 Ga0070667_100012327 3300005367 Bacteria 7073
38 Ga0070667_100012516 3300005367 Bacteria 7017
39 Ga0070714_100075486 3300005435 Bacteria 2925
40 Ga0070663_100051674 3300005455 Bacteria 2929
41 Ga0070678_100013865 3300005456 Bacteria 5067
42 Ga0070678_100018288 3300005456 Bacteria 4541
43 Ga0070662_100000161 3300005457 Bacteria 38797
44 Ga0070681_10007848 3300005458 Bacteria 10436
45 Ga0070681_10032713 3300005458 Bacteria 5221
46 Ga0068867_100000525 3300005459 Bacteria 25456
47 Ga0070685_10049058 3300005466 Bacteria 2434
48 Ga0070679_100000484 3300005530 Bacteria 34148
49 Ga0070679_100014516 3300005530 Bacteria 7567
50 Ga0068853_100013746 3300005539 Bacteria 6613
51 Ga0070672_100024639 3300005543 Bacteria 4451
52 Ga0070665_100000010 3300005548 Bacteria 529545
53 Ga0068855_100003326 3300005563 Bacteria 19674
54 Ga0068855_100017021 3300005563 Bacteria 8744
55 Ga0068855_100022235 3300005563 Bacteria 7599
56 Ga0070664_100009390 3300005564 Bacteria 7930
57 Ga0068857_100041489 3300005577 Bacteria 4081
58 Ga0068852_100000257 3300005616 Bacteria 35982
59 Ga0068852_100014052 3300005616 Bacteria 6145
60 Ga0068859_100000242 3300005617 Bacteria 53646
61 Ga0068859_100071657 3300005617 Bacteria 3501
62 Ga0068864_100055038 3300005618 Unclassified 3434
63 Ga0068864_100058172 3300005618 Bacteria 3340
64 Ga0068851_10016218 3300005834 Bacteria 3562
65 Ga0068851_10034988 3300005834 Bacteria 2509
66 Ga0068863_100028710 3300005841 Bacteria 5312
67 Ga0068858_100030845 3300005842 Bacteria 4979
68 Ga0068860_100003319 3300005843 Bacteria 16565
69 Ga0068860_100009829 3300005843 Bacteria 9490
70 Ga0068860_100048872 3300005843 Bacteria 4031
71 Ga0068860_100055828 3300005843 Bacteria 3755
72 Ga0075366_10002199 3300006195 Bacteria 9947
73 Ga0097621_100000007 3300006237 Bacteria 131146
74 Ga0097621_100000277 3300006237 Bacteria 34682
75 Ga0097621_100007678 3300006237 Bacteria 7736
76 Ga0097621_100054300 3300006237 Bacteria 3267
77 Ga0097621_100065244 3300006237 Bacteria 2996
78 Ga0097621_100123985 3300006237 Bacteria 2193
79 Ga0068871_100000024 3300006358 Bacteria 82027
80 Ga0068871_100000455 3300006358 Bacteria 28102
81 Ga0068871_100020570 3300006358 Bacteria 5058
82 Ga0075431_100002809 3300006847 Bacteria 16862
83 Ga0068865_100000071 3300006881 Bacteria 53613
84 Ga0097620_100000242 3300006931 Bacteria 53646
85 Ga0097620_100071656 3300006931 Bacteria 3501
86 Ga0105240_10104612 3300009093 Bacteria 3438
87 Ga0105240_10116275 3300009093 Bacteria 3227
88 Ga0111539_10011457 3300009094 Bacteria 11131
89 Ga0111539_10020011 3300009094 Bacteria 8244
90 Ga0111539_10153336 3300009094 Bacteria 2696
91 Ga0114129_10041526 3300009147 Bacteria 6480
92 Ga0105241_10000060 3300009174 Bacteria 83605
93 Ga0105241_10000661 3300009174 Bacteria 25857
94 Ga0105241_10011822 3300009174 Bacteria 6411
95 Ga0105248_10005497 3300009177 Bacteria 13911
96 Ga0105237_10001695 3300009545 Bacteria 28550
97 Ga0105237_10004033 3300009545 Bacteria 17156
98 Ga0105237_10012350 3300009545 Bacteria 8998
99 Ga0105237_10014705 3300009545 Bacteria 8172
100 Ga0105237_10015257 3300009545 Bacteria 8003
101 Ga0105237_10030544 3300009545 Bacteria 5471
102 Ga0105237_10034897 3300009545 Bacteria 5090
103 Ga0105238_10011424 3300009551 Bacteria 8944
104 Ga0105238_10087593 3300009551 Bacteria 3101
105 Ga0105239_10000013 3300010375 Bacteria 327371
106 Ga0105239_10000278 3300010375 Bacteria 75485
107 Ga0105239_10004127 3300010375 Bacteria 17443
108 Ga0105239_10010711 3300010375 Bacteria 10243
109 Ga0105239_10012428 3300010375 Bacteria 9482
110 Ga0105239_10027895 3300010375 Bacteria 6212
111 Ga0157373_10000345 3300013100 Bacteria 37575
112 Ga0157373_10007142 3300013100 Bacteria 8328
113 Ga0157373_10049516 3300013100 Bacteria 2994
114 Ga0157371_10002260 3300013102 Bacteria 18589
115 Ga0157371_10017367 3300013102 Bacteria 5348
116 Ga0157370_10003105 3300013104 Bacteria 19666
117 Ga0157370_10013102 3300013104 Bacteria 8557
118 Ga0157370_10062195 3300013104 Bacteria 3541
119 Ga0157369_10020374 3300013105 Bacteria 7413
120 Ga0157369_10044082 3300013105 Bacteria 4858
121 Ga0157374_10000213 3300013296 Bacteria 53259
122 Ga0157374_10000255 3300013296 Bacteria 49033
123 Ga0157374_10007511 3300013296 Bacteria 9298
124 Ga0157378_10012426 3300013297 Bacteria 7456
125 Ga0157378_10015579 3300013297 Bacteria 6658
126 Ga0157378_10018921 3300013297 Bacteria 6053
127 Ga0157378_10023566 3300013297 Bacteria 5415
128 Ga0157378_10126843 3300013297 Bacteria 2358
129 Ga0157378_10128794 3300013297 Unclassified 2340
130 Ga0163162_10000046 3300013306 Bacteria 126777
131 Ga0163162_10000554 3300013306 Bacteria 34569
132 Ga0163162_10001851 3300013306 Bacteria 19914
133 Ga0163162_10001920 3300013306 Bacteria 19570
134 Ga0163162_10005520 3300013306 Bacteria 12225
135 Ga0163162_10168126 3300013306 Bacteria 2317
136 Ga0157372_10030262 3300013307 Bacteria 5922
137 Ga0157372_10037519 3300013307 Bacteria 5347
138 Ga0157372_10039476 3300013307 Bacteria 5210
139 Ga0157372_10041770 3300013307 Bacteria 5070
140 Ga0157372_10070651 3300013307 Bacteria 3929
141 Ga0157372_10071095 3300013307 Bacteria 3918
142 Ga0157372_10149985 3300013307 Unclassified 2690
143 Ga0157372_10183565 3300013307 Unclassified 2422
144 Ga0157372_10271409 3300013307 Bacteria 1971
145 Ga0157375_10000166 3300013308 Bacteria 61836
146 Ga0157375_10038443 3300013308 Unclassified 4595
147 Ga0157375_10058266 3300013308 Bacteria 3821
148 Ga0157375_10058397 3300013308 Bacteria 3816
149 Ga0157375_10098011 3300013308 Bacteria 3007
150 Ga0157375_10102190 3300013308 Bacteria 2951
151 Ga0163163_10000266 3300014325 Bacteria 52427
152 Ga0157380_10002085 3300014326 Bacteria 13400
153 Ga0182008_10000001 3300014497 Bacteria 540790
154 Ga0182008_10006066 3300014497 Bacteria 6799
155 Ga0182008_10047958 3300014497 Bacteria 2122
156 Ga0157377_10030750 3300014745 Unclassified 2911
157 Ga0157379_10015260 3300014968 Bacteria 6738
158 Ga0157379_10102350 3300014968 Bacteria 2571
159 Ga0157376_10007428 3300014969 Bacteria 7824
160 Ga0182006_1006850 3300015261 Bacteria 5260
161 Ga0182006_1025978 3300015261 Bacteria 2402
162 Ga0207427_100090 3300025231 Bacteria 133759
163 Ga0209437_100034 3300025233 Bacteria 494007
164 Ga0209437_100280 3300025233 Bacteria 74968
165 Ga0209233_1000038 3300025261 Bacteria 548972
166 Ga0209455_1001718 3300025272 Bacteria 9364
167 Ga0207426_1000009 3300025302 Bacteria 797229
168 Ga0207426_1000034 3300025302 Bacteria 454016
169 Ga0207680_10027388 3300025903 Bacteria 3173
170 Ga0207647_10000021 3300025904 Bacteria 121592
171 Ga0207645_10000091 3300025907 Bacteria 65333
172 Ga0207645_10001553 3300025907 Bacteria 18788
173 Ga0207643_10007160 3300025908 Bacteria 5985
174 Ga0207705_10000028 3300025909 Bacteria 240636
175 Ga0207654_10001081 3300025911 Bacteria 14807
176 Ga0207654_10009228 3300025911 Bacteria 5002
177 Ga0207654_10022318 3300025911 Bacteria 3375
178 Ga0207695_10000058 3300025913 Bacteria 366582
179 Ga0207695_10140319 3300025913 Bacteria 2366
180 Ga0207671_10000983 3300025914 Bacteria 35275
181 Ga0207671_10004062 3300025914 Bacteria 14188
182 Ga0207671_10011891 3300025914 Bacteria 7039
183 Ga0207671_10012926 3300025914 Bacteria 6681
184 Ga0207671_10053455 3300025914 Bacteria 2993
185 Ga0207660_10028576 3300025917 Bacteria 3815
186 Ga0207657_10003900 3300025919 Bacteria 15826
187 Ga0207657_10117642 3300025919 Bacteria 2189
188 Ga0207649_10010611 3300025920 Bacteria 5065
189 Ga0207652_10000011 3300025921 Bacteria 246742
190 Ga0207652_10000367 3300025921 Bacteria 46853
191 Ga0207652_10160753 3300025921 Bacteria 2014
192 Ga0207659_10052086 3300025926 Bacteria 2914
193 Ga0207664_10055927 3300025929 Bacteria 3132
194 Ga0207644_10020561 3300025931 Bacteria 4489
195 Ga0207706_10000088 3300025933 Bacteria 94903
196 Ga0207709_10068271 3300025935 Bacteria 2246
197 Ga0207691_10077008 3300025940 Bacteria 3005
198 Ga0207711_10040549 3300025941 Bacteria 3961
199 Ga0207689_10002594 3300025942 Bacteria 16721
200 Ga0207689_10011245 3300025942 Bacteria 7682
201 Ga0207689_10023968 3300025942 Bacteria 5120
202 Ga0207667_10023007 3300025949 Bacteria 6869
203 Ga0207667_10100535 3300025949 Bacteria 2983
204 Ga0207651_10005738 3300025960 Bacteria 6411
205 Ga0207712_10052469 3300025961 Bacteria 2856
206 Ga0207658_10008446 3300025986 Bacteria 7009
207 Ga0207639_10005644 3300026041 Bacteria 8468
208 Ga0207639_10028401 3300026041 Bacteria 4084
209 Ga0207639_10108160 3300026041 Bacteria 2260
210 Ga0207678_10034410 3300026067 Bacteria 4413
211 Ga0207641_10000053 3300026088 Bacteria 173468
212 Ga0207648_10000188 3300026089 Bacteria 64863
213 Ga0207648_10008168 3300026089 Bacteria 10173
214 Ga0207676_10075407 3300026095 Bacteria 2721
215 Ga0207674_10056153 3300026116 Bacteria 4000
216 Ga0207674_10139811 3300026116 Bacteria 2381
217 Ga0207675_100017934 3300026118 Bacteria 6602
218 Ga0207683_10000198 3300026121 Bacteria 51725
219 Ga0207698_10004952 3300026142 Bacteria 8164
220 Ga0207428_10067378 3300027907 Bacteria 2819
221 Ga0268266_10000094 3300028379 Bacteria 190917
222 Ga0268264_10003470 3300028381 Bacteria 13598
223 Ga0268264_10009072 3300028381 Bacteria 8248
224 Ga0268264_10033382 3300028381 Bacteria 4227
225 Ga0307517_10001745 3300028786 Bacteria 35870
226 Ga0307515_10000016 3300028794 Bacteria 554870
227 Ga0307515_10000172 3300028794 Bacteria 159265
228 Ga0307515_10000190 3300028794 Bacteria 150300
229 Ga0307515_10000316 3300028794 Bacteria 119243
230 Ga0316177_1012191 3300030731 Bacteria 8642
231 Ga0316176_1204851 3300030732 Bacteria 41535
232 Ga0316183_1109514 3300030742 Bacteria 62860
233 Ga0316181_1261343 3300030744 Bacteria 21663
234 Ga0307509_10131956 3300031507 Bacteria 2451
235 Ga0307508_10047344 3300031616 Bacteria 3836
236 Ga0307412_10000017 3300031911 Bacteria 294698
237 Ga0307416_100005101 3300032002 Bacteria 8014
238 Ga0307414_10000069 3300032004 Bacteria 98243
239 Ga0307414_10008866 3300032004 Bacteria 5739
240 Ga0307414_10020732 3300032004 Bacteria 4104
241 Ga0307414_10156552 3300032004 Bacteria 1804
242 Ga0307507_10000071 3300033179 Bacteria 158391
243 Ga0395899_0000001 3300037312 Bacteria 1750322
244 Ga0395899_0002652 3300037312 Bacteria 14415
245 Ga0395900_0001542 3300037418 Bacteria 27361
246 Ga0395900_0017757 3300037418 Bacteria 7261
247 Ga0395900_0077871 3300037418 Bacteria 3406
248 Ga0395898_0011108 3300037466 Bacteria 9375
249 Ga0395898_0018208 3300037466 Bacteria 7165
250 Ga0395898_0046244 3300037466 Bacteria 4275
251 Ga0395898_0112549 3300037466 Bacteria 2608
252 Ga0395905_0007099 3300037471 Bacteria 11194
253 Ga0395905_0052812 3300037471 Bacteria 3804
254 Ga0395905_0086680 3300037471 Bacteria 2935
255 Ga0395901_0004644 3300038443 Bacteria 13854
256 Ga0395901_0130895 3300038443 Unclassified 2636
257 Ga0395901_0137748 3300038443 Bacteria 2565
258 Ga0436361_0546079 3300039447 Bacteria 1738
259 Ga0439431_0002366 3300041997 Bacteria 4169
260 Ga0451577_0000951 3300042876 Bacteria 42468
261 Ga0466972_0027503 3300044658 Bacteria 2813
262 Ga0453684_0002532 3300044712 Bacteria 44022
263 Ga0451576_0007552 3300045051 Bacteria 12958
264 Ga0495629_0026937 3300046459 Bacteria 4083
265 Ga0495651_0115537 3300046462 Bacteria 1979
266 Ga0495650_0000057 3300046471 Bacteria 303569
267 Ga0495580_0027149 3300046472 Bacteria 4168
268 Ga0495585_0001556 3300046492 Bacteria 17790
269 Ga0495583_0010478 3300046506 Bacteria 5401
270 Ga0495606_0000021 3300046507 Bacteria 271238
271 Ga0495606_0033808 3300046507 Bacteria 3520
272 Ga0495610_0000612 3300046512 Bacteria 35305
273 Ga0495616_0004201 3300046513 Bacteria 9126
274 Ga0495616_0005198 3300046513 Bacteria 8051
275 Ga0495630_0066862 3300046517 Bacteria 2702
276 Ga0495631_0006506 3300046518 Bacteria 6028
277 Ga0495645_0117139 3300046543 Bacteria 1880
278 Ga0495633_0000161 3300046558 Bacteria 87685
279 Ga0495633_0008813 3300046558 Bacteria 5635
280 Ga0495625_0000003 3300046660 Bacteria 686847
281 Ga0495625_0002432 3300046660 Bacteria 20154
282 Ga0495625_0002809 3300046660 Bacteria 18347
283 Ga0495661_0000485 3300046665 Bacteria 41846
284 Ga0495661_0017958 3300046665 Bacteria 4661
285 Ga0495649_0000002 3300046694 Bacteria 1093458
286 Ga0495674_0037677 3300047319 Bacteria 4345
287 Ga0495683_0019515 3300047323 Bacteria 3498
288 Ga0495673_0039444 3300047469 Bacteria 2142
289 Ga0495686_0000794 3300047472 Bacteria 41212
290 Ga0495686_0001677 3300047472 Bacteria 23025
291 Ga0501031_0016962 3300049568 Bacteria 4731
292 Ga0501034_0012982 3300049571 Bacteria 8587
293 Ga0501034_0111246 3300049571 Bacteria 2729
294 Ga0501036_0127515 3300049572 Bacteria 2149
295 Ga0501037_0040369 3300049573 Bacteria 3434
296 Ga0501038_0037759 3300049574 Bacteria 4234
297 Ga0501039_0014787 3300049575 Bacteria 5970
298 Ga0501043_0010445 3300049579 Bacteria 7273
299 Ga0501046_0103857 3300049580 Bacteria 2178
300 Ga0501047_0052769 3300049581 Bacteria 3930
301 Ga0501257_002337 3300049686 Bacteria 3989
302 Ga0501241_001510 3300049758 Bacteria 4704
303 Ga0501044_0037475 3300049823 Bacteria 5068
304 Ga0501284_00464 3300050005 Bacteria 2091
305 nmdc:mga06r32_38845_c1 3300050510 Bacteria 4513
306 nmdc:mga08y16_10857_c1 3300050511 Bacteria 9564
307 nmdc:mga08y16_8130_c1 3300050511 Bacteria 3973
308 Ga0500635_0003697 3300053080 Bacteria 3871
309 Ga0500644_0002488 3300053088 Bacteria 4604
310 Ga0500644_0007841 3300053088 Bacteria 2795
311 Ga0500651_0000148 3300053093 Bacteria 44606
312 Ga0500562_000003 3300053108 Bacteria 293779
313 Ga0500608_000365 3300053122 Bacteria 17523
314 Ga0500618_000013 3300053125 Bacteria 183026
315 Ga0500658_0010134 3300053134 Bacteria 3475
316 Ga0500588_0000290 3300053146 Bacteria 7421
317 Ga0500588_0005160 3300053146 Bacteria 2882
318 Ga0500622_0000475 3300053156 Bacteria 37778
319 Ga0500624_001074 3300053157 Bacteria 5252
320 Ga0500634_0034491 3300053161 Bacteria 2757
321 2599481789 2599185184 Bacteria 6430550
322 2738763895 2738541284 Bacteria 5199923
323 2776613635 2775506987 Bacteria 5373360
324 2819681888 2818991460 Bacteria 7595395
325 2842905730 2842903701 Bacteria 6986368
326 2884637585 2884634485 Bacteria 3928637
327 2884794738 2884791551 Bacteria 8511252
328 2896088018 2896085136 Bacteria 6129793
329 2896111685 2896109856 Bacteria 7140722
330 2911142249 2911138879 Bacteria 5811561
331 2919437920 2919437846 Bacteria 6199444
332 2919697370 2919692658 Bacteria 5943958
333 2928082071 2928078545 Bacteria 6534839
334 2928152089 2928147474 Bacteria 6512076
335 2929179599 2929177148 Bacteria 7883697
336 2932088107 2932082852 Bacteria 6563563
337 2945982017 2945977869 Bacteria 7777518
338 2946018586 2946013367 Bacteria 7766675
339 Ga0307414_10001484
340 SwRhRL2b_contig_1362779
341 SwRhRL2b_contig_1933315
342 JGI24735J21928_10000027
343 JGI25162J39368_1000158
344 JGI25165J46597_1000986
345 rootH2_10089470
346 rootL2_10002912
347 rootH1_10102515
348 JGI25160J50197_1001158
349 JGI25160J50197_1005706
350 Ga0065165_1003537
351 Ga0065714_10004682
352 Ga0065714_10004852
353 Ga0065714_10067157
354 Ga0065704_10000199
355 Ga0065704_10082951
356 Ga0065704_10092700
357 Ga0070658_10064332
358 Ga0070676_10069383
359 Ga0070683_100075159
360 Ga0070670_100055374
361 Ga0068869_100008903
362 Ga0068869_100037268
363 Ga0070682_100084755
364 Ga0068868_100003556
365 Ga0068868_100052359
366 Ga0070660_100029742
367 Ga0070689_100110017
368 Ga0070668_100032653
369 Ga0070668_100090082
370 Ga0070669_100071167
371 Ga0070675_100007800
372 Ga0070671_100004338
373 Ga0070671_100018778
374 Ga0070659_100061402
375 Ga0070667_100012327
376 Ga0070667_100012516
377 Ga0070714_100075486
378 Ga0070663_100051674
379 Ga0070678_100013865
380 Ga0070678_100018288
381 Ga0070662_100000161
382 Ga0070681_10007848
383 Ga0070681_10032713
384 Ga0068867_100000525
385 Ga0070685_10049058
386 Ga0070679_100000484
387 Ga0070679_100014516
388 Ga0068853_100013746
389 Ga0070672_100024639
390 Ga0070665_100000010
391 Ga0068855_100003326
392 Ga0068855_100017021
393 Ga0068855_100022235
394 Ga0070664_100009390
395 Ga0068857_100041489
396 Ga0068852_100000257
397 Ga0068852_100014052
398 Ga0068859_100000242
399 Ga0068859_100071657
400 Ga0068864_100055038
401 Ga0068864_100058172
402 Ga0068851_10016218
403 Ga0068851_10034988
404 Ga0068863_100028710
405 Ga0068858_100030845
406 Ga0068860_100003319
407 Ga0068860_100009829
408 Ga0068860_100048872
409 Ga0068860_100055828
410 Ga0075366_10002199
411 Ga0097621_100000007
412 Ga0097621_100000277
413 Ga0097621_100007678
414 Ga0097621_100054300
415 Ga0097621_100065244
416 Ga0097621_100123985
417 Ga0068871_100000024
418 Ga0068871_100000455
419 Ga0068871_100020570
420 Ga0075431_100002809
421 Ga0068865_100000071
422 Ga0097620_100000242
423 Ga0097620_100071656
424 Ga0105240_10104612
425 Ga0105240_10116275
426 Ga0111539_10011457
427 Ga0111539_10020011
428 Ga0111539_10153336
429 Ga0114129_10041526
430 Ga0105241_10000060
431 Ga0105241_10000661
432 Ga0105241_10011822
433 Ga0105248_10005497
434 Ga0105237_10001695
435 Ga0105237_10004033
436 Ga0105237_10012350
437 Ga0105237_10014705
438 Ga0105237_10015257
439 Ga0105237_10030544
440 Ga0105237_10034897
441 Ga0105238_10011424
442 Ga0105238_10087593
443 Ga0105239_10000013
444 Ga0105239_10000278
445 Ga0105239_10004127
446 Ga0105239_10010711
447 Ga0105239_10012428
448 Ga0105239_10027895
449 Ga0157373_10000345
450 Ga0157373_10007142
451 Ga0157373_10049516
452 Ga0157371_10002260
453 Ga0157371_10017367
454 Ga0157370_10003105
455 Ga0157370_10013102
456 Ga0157370_10062195
457 Ga0157369_10020374
458 Ga0157369_10044082
459 Ga0157374_10000213
460 Ga0157374_10000255
461 Ga0157374_10007511
462 Ga0157378_10012426
463 Ga0157378_10015579
464 Ga0157378_10018921
465 Ga0157378_10023566
466 Ga0157378_10126843
467 Ga0157378_10128794
468 Ga0163162_10000046
469 Ga0163162_10000554
470 Ga0163162_10001851
471 Ga0163162_10001920
472 Ga0163162_10005520
473 Ga0163162_10168126
474 Ga0157372_10030262
475 Ga0157372_10037519
476 Ga0157372_10039476
477 Ga0157372_10041770
478 Ga0157372_10070651
479 Ga0157372_10071095
480 Ga0157372_10149985
481 Ga0157372_10183565
482 Ga0157372_10271409
483 Ga0157375_10000166
484 Ga0157375_10038443
485 Ga0157375_10058266
486 Ga0157375_10058397
487 Ga0157375_10098011
488 Ga0157375_10102190
489 Ga0163163_10000266
490 Ga0157380_10002085
491 Ga0182008_10000001
492 Ga0182008_10006066
493 Ga0182008_10047958
494 Ga0157377_10030750
495 Ga0157379_10015260
496 Ga0157379_10102350
497 Ga0157376_10007428
498 Ga0182006_1006850
499 Ga0182006_1025978
500 Ga0207427_100090
501 Ga0209437_100034
502 Ga0209437_100280
503 Ga0209233_1000038
504 Ga0209455_1001718
505 Ga0207426_1000009
506 Ga0207426_1000034
507 Ga0207680_10027388
508 Ga0207647_10000021
509 Ga0207645_10000091
510 Ga0207645_10001553
511 Ga0207643_10007160
512 Ga0207705_10000028
513 Ga0207654_10001081
514 Ga0207654_10009228
515 Ga0207654_10022318
516 Ga0207695_10000058
517 Ga0207695_10140319
518 Ga0207671_10000983
519 Ga0207671_10004062
520 Ga0207671_10011891
521 Ga0207671_10012926
522 Ga0207671_10053455
523 Ga0207660_10028576
524 Ga0207657_10003900
525 Ga0207657_10117642
526 Ga0207649_10010611
527 Ga0207652_10000011
528 Ga0207652_10000367
529 Ga0207652_10160753
530 Ga0207659_10052086
531 Ga0207664_10055927
532 Ga0207644_10020561
533 Ga0207706_10000088
534 Ga0207709_10068271
535 Ga0207691_10077008
536 Ga0207711_10040549
537 Ga0207689_10002594
538 Ga0207689_10011245
539 Ga0207689_10023968
540 Ga0207667_10023007
541 Ga0207667_10100535
542 Ga0207651_10005738
543 Ga0207712_10052469
544 Ga0207658_10008446
545 Ga0207639_10005644
546 Ga0207639_10028401
547 Ga0207639_10108160
548 Ga0207678_10034410
549 Ga0207641_10000053
550 Ga0207648_10000188
551 Ga0207648_10008168
552 Ga0207676_10075407
553 Ga0207674_10056153
554 Ga0207674_10139811
555 Ga0207675_100017934
556 Ga0207683_10000198
557 Ga0207698_10004952
558 Ga0207428_10067378
559 Ga0268266_10000094
560 Ga0268264_10003470
561 Ga0268264_10009072
562 Ga0268264_10033382
563 Ga0307517_10001745
564 Ga0307515_10000016
565 Ga0307515_10000172
566 Ga0307515_10000190
567 Ga0307515_10000316
568 Ga0316177_1012191
569 Ga0316176_1204851
570 Ga0316183_1109514
571 Ga0316181_1261343
572 Ga0307509_10131956
573 Ga0307508_10047344
574 Ga0307412_10000017
575 Ga0307416_100005101
576 Ga0307414_10000069
577 Ga0307414_10008866
578 Ga0307414_10020732
579 Ga0307414_10156552
580 Ga0307507_10000071
581 Ga0395899_0000001
582 Ga0395899_0002652
583 Ga0395900_0001542
584 Ga0395900_0017757
585 Ga0395900_0077871
586 Ga0395898_0011108
587 Ga0395898_0018208
588 Ga0395898_0046244
589 Ga0395898_0112549
590 Ga0395905_0007099
591 Ga0395905_0052812
592 Ga0395905_0086680
593 Ga0395901_0004644
594 Ga0395901_0130895
595 Ga0395901_0137748
596 Ga0436361_0546079
597 Ga0439431_0002366
598 Ga0451577_0000951
599 Ga0466972_0027503
600 Ga0453684_0002532
601 Ga0451576_0007552
602 Ga0495629_0026937
603 Ga0495651_0115537
604 Ga0495650_0000057
605 Ga0495580_0027149
606 Ga0495585_0001556
607 Ga0495583_0010478
608 Ga0495606_0000021
609 Ga0495606_0033808
610 Ga0495610_0000612
611 Ga0495616_0004201
612 Ga0495616_0005198
613 Ga0495630_0066862
614 Ga0495631_0006506
615 Ga0495645_0117139
616 Ga0495633_0000161
617 Ga0495633_0008813
618 Ga0495625_0000003
619 Ga0495625_0002432
620 Ga0495625_0002809
621 Ga0495661_0000485
622 Ga0495661_0017958
623 Ga0495649_0000002
624 Ga0495674_0037677
625 Ga0495683_0019515
626 Ga0495673_0039444
627 Ga0495686_0000794
628 Ga0495686_0001677
629 Ga0501031_0016962
630 Ga0501034_0012982
631 Ga0501034_0111246
632 Ga0501036_0127515
633 Ga0501037_0040369
634 Ga0501038_0037759
635 Ga0501039_0014787
636 Ga0501043_0010445
637 Ga0501046_0103857
638 Ga0501047_0052769
639 Ga0501257_002337
640 Ga0501241_001510
641 Ga0501044_0037475
642 Ga0501284_00464
643 nmdc:mga06r32_38845_c1
644 nmdc:mga08y16_10857_c1
645 nmdc:mga08y16_8130_c1
646 Ga0500635_0003697
647 Ga0500644_0002488
648 Ga0500644_0007841
649 Ga0500651_0000148
650 Ga0500562_000003
651 Ga0500608_000365
652 Ga0500618_000013
653 Ga0500658_0010134
654 Ga0500588_0000290
655 Ga0500588_0005160
656 Ga0500622_0000475
657 Ga0500624_001074
658 Ga0500634_0034491
659 2599481789
660 2738763895
661 2776613635
662 2819681888
663 2842905730
664 2884637585
665 2884794738
666 2896088018
667 2896111685
668 2911142249
669 2919437920
670 2919697370
671 2928082071
672 2928152089
673 2929179599
674 2932088107
675 2945982017
676 2946018586

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00920

ILVD_EDD

Dehydratase family

38

551

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8epz-assembly1.cif.gz_B crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn 0.9656 2 566
8epz-assembly1.cif.gz_B crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn 0.9623 2 566
5j83-assembly1.cif.gz_A crystal structure of l-arabinonate dehydratase in apo-form 0.9603 1 566
5j83-assembly1.cif.gz_A crystal structure of l-arabinonate dehydratase in apo-form 0.9587 1 566
5j85-assembly1.cif.gz_A ser480ala mutant of l-arabinonate dehydratase 0.9449 1 566
ID Description Score Start End Superfamily
af_Q2FWK7_1_375_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.93 1 365 3.40.50.360
af_I1M137_1_420_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9242 2 363 3.40.50.1820
af_Q2FWK7_1_375_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9037 1 365 3.40.50.360
af_Q58672_371_522_3.50.30.80 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;IlvD/EDD C-terminal domain-like 0.8578 368 521 3.50.30.80
af_Q58672_371_522_3.50.30.80 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;IlvD/EDD C-terminal domain-like 0.8474 368 521 3.50.30.80
ID Description Score Start End GO Terms
AF-W7PN11-F1-model_v4 Dihydroxy-acid dehydratase 0.9871 198 351 GO:0016836
GO:0046872
GO:0051536
AF-T0ZT25-F1-model_v4 Dihydroxy-acid and 6-phosphogluconate dehydratase (EC 4.-.-.-) 0.9836 208 365 GO:0016836
GO:0046872
GO:0051536
AF-A0A3M3NKB3-F1-model_v4 deleted 0.9816 202 380
AF-A0A529K1H6-F1-model_v4 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.9789 192 367 GO:0004160
GO:0046872
GO:0051536
AF-A0A381GV76-F1-model_v4 deleted 0.9789 198 389

Map