F413635

General Info

Members Datasets Scaffolds Average Seq Length
338 188 676 293

Family's Representative Sequence

Representative Sequence 3300044735|Ga0466968_0020522|Ga0466968_0020522_973_1977
Length 334
Sequence LRILCALCVPKIVAKEERKGRKVDARVAKKTKSLSLHIMKKHIIISFLILSSVFLFAQKTDRRLQQKIQEMVTGFHGDIGVYVKNLRTGKVATLNADSIFPTASMVKVTILIGLADKLEKVELDYHQVLEYKDSLLYPGEDILGSFKSGEKIALNKVIMLMLTTSDNTASLWLQSLAGTGTRINEILDSLGMKYTRVNSRTPGREDNRKQYGWGQTTPREMGTLMEKIYHGEVISKKASEKMIRLLGRNYNDEQAIAEIPPYVFVASKNGCVDASRSEILLVMAPHGPYVFCITTKNNQDQSWNNSNEAWVLTRKVSALCWNYFEPRSHWKPSL

Samples

Sample ID Description Type Environment
1 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
13 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
16 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
21 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
22 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
23 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
55 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
81 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
84 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
121 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
122 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
123 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
124 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
125 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
129 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
130 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
131 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
132 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
133 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
134 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
135 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
136 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
137 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
138 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
139 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
140 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
141 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
142 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
147 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
151 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
163 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
164 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
165 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
166 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
167 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
175 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
176 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
177 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
183 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 2738541278 Niastella sp. CF465 Isolate Unclassified
186 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
187 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
188 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.82
Metatranscriptomes 0
Isolates 1.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.03
Nodule 0
Rhizoplane 0
Rhizosphere 89.94
Stem 0
Stem Tuber 0
Unclassified 12.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466968_0020522 3300044735 Bacteria 2668
2 CNXas_1001028 3300000545 Bacteria 1836
3 JGI24740J21852_10006002 3300001979 Bacteria 5079
4 JGI24751J29686_10000926 3300002459 Bacteria 6607
5 JGI25154J39366_1000012 3300002738 Bacteria 287601
6 rootL2_10063468 3300003322 Bacteria 3301
7 rootH1_10025260 3300003323 Bacteria 2836
8 Ga0065712_10080740 3300005290 Bacteria 3056
9 Ga0065715_10128034 3300005293 Bacteria 2060
10 Ga0065707_10092797 3300005295 Bacteria 3704
11 Ga0065707_10126997 3300005295 Bacteria 1992
12 Ga0070658_10110811 3300005327 Bacteria 2274
13 Ga0070676_10131325 3300005328 Bacteria 1584
14 Ga0070683_100001333 3300005329 Bacteria 18808
15 Ga0070683_100006531 3300005329 Bacteria 9793
16 Ga0070683_100054054 3300005329 Unclassified 3723
17 Ga0070683_100123958 3300005329 Bacteria 2442
18 Ga0070670_100013775 3300005331 Bacteria 6930
19 Ga0070670_100049484 3300005331 Bacteria 3613
20 Ga0070670_100458195 3300005331 Bacteria 1131
21 Ga0070677_10007158 3300005333 Bacteria 3720
22 Ga0068869_100022496 3300005334 Bacteria 4345
23 Ga0068869_100024948 3300005334 Bacteria 4146
24 Ga0068869_100218933 3300005334 Bacteria 1508
25 Ga0070682_100041045 3300005337 Unclassified 2850
26 Ga0068868_100002869 3300005338 Bacteria 11953
27 Ga0068868_100072508 3300005338 Bacteria 2748
28 Ga0070660_100027525 3300005339 Bacteria 4243
29 Ga0070689_100152474 3300005340 Bacteria 1864
30 Ga0070661_100001786 3300005344 Bacteria 14912
31 Ga0070661_100155258 3300005344 Bacteria 1731
32 Ga0070669_100007052 3300005353 Bacteria 8075
33 Ga0070669_100046721 3300005353 Bacteria 3157
34 Ga0070675_100062154 3300005354 Bacteria 3085
35 Ga0070675_100091515 3300005354 Bacteria 2549
36 Ga0070675_100206839 3300005354 Bacteria 1705
37 Ga0070671_100066365 3300005355 Unclassified 3007
38 Ga0070673_100005500 3300005364 Bacteria 8115
39 Ga0070673_100041283 3300005364 Bacteria 3547
40 Ga0070673_100054311 3300005364 Bacteria 3151
41 Ga0070673_100114909 3300005364 Bacteria 2237
42 Ga0070659_100001791 3300005366 Bacteria 15465
43 Ga0070659_100038886 3300005366 Bacteria 3712
44 Ga0070678_100214402 3300005456 Unclassified 1597
45 Ga0070662_100005730 3300005457 Bacteria 7960
46 Ga0070662_100015287 3300005457 Bacteria 5138
47 Ga0068867_100020267 3300005459 Bacteria 4738
48 Ga0068867_100067758 3300005459 Bacteria 2662
49 Ga0068867_100104371 3300005459 Bacteria 2169
50 Ga0070685_10057255 3300005466 Bacteria 2268
51 Ga0070685_10318148 3300005466 Bacteria 1054
52 Ga0070698_100002541 3300005471 Bacteria 20094
53 Ga0070698_100071444 3300005471 Bacteria 3480
54 Ga0070699_100132666 3300005518 Bacteria 2196
55 Ga0070684_100008678 3300005535 Bacteria 7965
56 Ga0070684_100008748 3300005535 Bacteria 7938
57 Ga0070684_100166134 3300005535 Bacteria 2003
58 Ga0070684_100319237 3300005535 Bacteria 1427
59 Ga0068853_100005466 3300005539 Bacteria 9955
60 Ga0068853_100306517 3300005539 Bacteria 1469
61 Ga0070672_100111023 3300005543 Bacteria 2234
62 Ga0070672_100269474 3300005543 Bacteria 1437
63 Ga0070665_100082620 3300005548 Unclassified 3218
64 Ga0068855_100179158 3300005563 Bacteria 2397
65 Ga0068855_100212300 3300005563 Unclassified 2174
66 Ga0070664_100032775 3300005564 Bacteria 4346
67 Ga0070664_100133252 3300005564 Unclassified 2183
68 Ga0070664_100170355 3300005564 Bacteria 1931
69 Ga0068857_100004228 3300005577 Bacteria 12096
70 Ga0068857_100023495 3300005577 Bacteria 5427
71 Ga0068857_100110824 3300005577 Bacteria 2467
72 Ga0068857_100116004 3300005577 Bacteria 2409
73 Ga0068856_100036881 3300005614 Unclassified 4794
74 Ga0068852_100002826 3300005616 Bacteria 12036
75 Ga0068852_100012324 3300005616 Bacteria 6486
76 Ga0068852_100035036 3300005616 Bacteria 4182
77 Ga0068852_100080328 3300005616 Bacteria 2891
78 Ga0068852_100334476 3300005616 Bacteria 1474
79 Ga0068852_100611175 3300005616 Bacteria 1095
80 Ga0068859_100010593 3300005617 Bacteria 9280
81 Ga0068859_100075224 3300005617 Unclassified 3417
82 Ga0068859_100092502 3300005617 Bacteria 3075
83 Ga0068859_100449927 3300005617 Bacteria 1384
84 Ga0068864_100025644 3300005618 Bacteria 4967
85 Ga0068864_100036735 3300005618 Bacteria 4177
86 Ga0068864_100036790 3300005618 Bacteria 4174
87 Ga0068864_100039861 3300005618 Bacteria 4015
88 Ga0068864_100118646 3300005618 Bacteria 2363
89 Ga0068866_10266605 3300005718 Bacteria 1055
90 Ga0068861_100082487 3300005719 Bacteria 2520
91 Ga0068861_100086030 3300005719 Bacteria 2470
92 Ga0068861_100421861 3300005719 Bacteria 1189
93 Ga0068863_100040774 3300005841 Unclassified 4415
94 Ga0068863_100540137 3300005841 Bacteria 1150
95 Ga0068858_100034751 3300005842 Bacteria 4675
96 Ga0068860_100005406 3300005843 Bacteria 12961
97 Ga0068860_100070298 3300005843 Bacteria 3328
98 Ga0068860_100150851 3300005843 Bacteria 2238
99 Ga0068862_100028774 3300005844 Bacteria 4680
100 Ga0068862_100106598 3300005844 Bacteria 2457
101 Ga0075366_10011054 3300006195 Bacteria 5084
102 Ga0097621_100213052 3300006237 Bacteria 1681
103 Ga0097621_100265509 3300006237 Bacteria 1507
104 Ga0068871_100136757 3300006358 Bacteria 2081
105 Ga0068871_100200928 3300006358 Bacteria 1721
106 Ga0068871_100471519 3300006358 Bacteria 1128
107 Ga0075428_100000822 3300006844 Bacteria 32467
108 Ga0075428_100014821 3300006844 Bacteria 8663
109 Ga0075430_100001793 3300006846 Bacteria 17561
110 Ga0075430_100034380 3300006846 Bacteria 4302
111 Ga0075431_100139712 3300006847 Bacteria 2497
112 Ga0075429_100000136 3300006880 Bacteria 44169
113 Ga0075429_100236235 3300006880 Unclassified 1601
114 Ga0068865_100088043 3300006881 Unclassified 2246
115 Ga0097620_100010593 3300006931 Bacteria 9280
116 Ga0097620_100075225 3300006931 Unclassified 3417
117 Ga0097620_100092500 3300006931 Bacteria 3075
118 Ga0097620_100449897 3300006931 Bacteria 1384
119 Ga0105251_10063766 3300009011 Bacteria 1728
120 Ga0111539_10005877 3300009094 Bacteria 15846
121 Ga0105247_10012665 3300009101 Bacteria 5061
122 Ga0105247_10140411 3300009101 Bacteria 1582
123 Ga0114129_10041765 3300009147 Bacteria 6458
124 Ga0114129_10136959 3300009147 Bacteria 3359
125 Ga0105248_10112072 3300009177 Bacteria 3077
126 Ga0105237_10166562 3300009545 Bacteria 2203
127 Ga0105237_10268280 3300009545 Bacteria 1710
128 Ga0105249_10000434 3300009553 Bacteria 39679
129 Ga0105249_10001213 3300009553 Bacteria 22729
130 Ga0105249_10001820 3300009553 Bacteria 18549
131 Ga0105249_10007152 3300009553 Bacteria 9742
132 Ga0105249_10055910 3300009553 Bacteria 3613
133 Ga0105249_10077209 3300009553 Unclassified 3088
134 Ga0105249_10077871 3300009553 Bacteria 3075
135 Ga0105249_10420187 3300009553 Unclassified 1371
136 Ga0105239_10000360 3300010375 Bacteria 66494
137 Ga0157370_10124240 3300013104 Bacteria 2409
138 Ga0157369_10047525 3300013105 Bacteria 4658
139 Ga0157374_10026127 3300013296 Bacteria 5251
140 Ga0157374_10066499 3300013296 Bacteria 3387
141 Ga0157374_10122181 3300013296 Bacteria 2514
142 Ga0157374_10543543 3300013296 Bacteria 1169
143 Ga0157378_10050544 3300013297 Bacteria 3700
144 Ga0157378_10188934 3300013297 Bacteria 1942
145 Ga0157378_10405612 3300013297 Unclassified 1344
146 Ga0163162_10001237 3300013306 Bacteria 23878
147 Ga0163162_10029880 3300013306 Bacteria 5396
148 Ga0157372_10003572 3300013307 Bacteria 16736
149 Ga0157372_10060646 3300013307 Bacteria 4233
150 Ga0157372_10328166 3300013307 Unclassified 1782
151 Ga0157375_10032634 3300013308 Bacteria 4940
152 Ga0157375_10050706 3300013308 Unclassified 4072
153 Ga0157375_10086704 3300013308 Bacteria 3182
154 Ga0157375_10177845 3300013308 Bacteria 2278
155 Ga0163163_10001217 3300014325 Bacteria 21766
156 Ga0163163_10036545 3300014325 Bacteria 4772
157 Ga0163163_10153702 3300014325 Unclassified 2344
158 Ga0157380_10022591 3300014326 Bacteria 4740
159 Ga0157380_10060369 3300014326 Bacteria 3030
160 Ga0157377_10158080 3300014745 Bacteria 1407
161 Ga0157376_10319865 3300014969 Unclassified 1475
162 Ga0163161_10270049 3300017792 Bacteria 1331
163 Ga0163161_10407318 3300017792 Bacteria 1092
164 Ga0213876_10000697 3300021384 Bacteria 23661
165 Ga0209646_1000009 3300025246 Bacteria 652154
166 Ga0209646_1003205 3300025246 Bacteria 3287
167 Ga0209026_1000221 3300025250 Bacteria 78071
168 Ga0209758_1004411 3300025297 Bacteria 11736
169 Ga0207426_1000477 3300025302 Bacteria 61236
170 Ga0207697_10101275 3300025315 Bacteria 1228
171 Ga0207682_10027707 3300025893 Bacteria 2257
172 Ga0207710_10010538 3300025900 Bacteria 3894
173 Ga0207680_10261181 3300025903 Bacteria 1199
174 Ga0207647_10000794 3300025904 Bacteria 24490
175 Ga0207647_10171906 3300025904 Unclassified 1261
176 Ga0207645_10046527 3300025907 Bacteria 2771
177 Ga0207645_10157604 3300025907 Bacteria 1484
178 Ga0207671_10140623 3300025914 Bacteria 1859
179 Ga0207671_10159841 3300025914 Bacteria 1744
180 Ga0207657_10095633 3300025919 Bacteria 2471
181 Ga0207649_10007571 3300025920 Bacteria 5903
182 Ga0207649_10142249 3300025920 Bacteria 1643
183 Ga0207681_10015301 3300025923 Bacteria 4783
184 Ga0207681_10057734 3300025923 Bacteria 2654
185 Ga0207650_10002238 3300025925 Bacteria 13508
186 Ga0207650_10139375 3300025925 Bacteria 1906
187 Ga0207659_10004579 3300025926 Bacteria 8362
188 Ga0207659_10082982 3300025926 Bacteria 2374
189 Ga0207659_10217838 3300025926 Bacteria 1533
190 Ga0207644_10271759 3300025931 Unclassified 1358
191 Ga0207706_10022973 3300025933 Bacteria 5600
192 Ga0207706_10034619 3300025933 Bacteria 4493
193 Ga0207670_10042139 3300025936 Unclassified 3006
194 Ga0207704_10309142 3300025938 Bacteria 1214
195 Ga0207689_10000843 3300025942 Bacteria 29516
196 Ga0207689_10021233 3300025942 Bacteria 5458
197 Ga0207689_10044881 3300025942 Bacteria 3656
198 Ga0207689_10222311 3300025942 Bacteria 1560
199 Ga0207661_10004262 3300025944 Bacteria 10014
200 Ga0207661_10013819 3300025944 Bacteria 5902
201 Ga0207661_10046201 3300025944 Bacteria 3452
202 Ga0207661_10061105 3300025944 Bacteria 3043
203 Ga0207661_10097436 3300025944 Bacteria 2463
204 Ga0207661_10340788 3300025944 Bacteria 1351
205 Ga0207679_10000297 3300025945 Bacteria 37427
206 Ga0207679_10017026 3300025945 Bacteria 4836
207 Ga0207679_10019037 3300025945 Bacteria 4608
208 Ga0207679_10052335 3300025945 Bacteria 2994
209 Ga0207679_10388855 3300025945 Bacteria 1224
210 Ga0207651_10003504 3300025960 Bacteria 7714
211 Ga0207651_10011992 3300025960 Bacteria 4880
212 Ga0207651_10110643 3300025960 Bacteria 2061
213 Ga0207712_10001032 3300025961 Bacteria 19728
214 Ga0207712_10001781 3300025961 Bacteria 14313
215 Ga0207712_10003001 3300025961 Bacteria 10786
216 Ga0207712_10060488 3300025961 Unclassified 2685
217 Ga0207712_10075031 3300025961 Bacteria 2443
218 Ga0207668_10044572 3300025972 Bacteria 3019
219 Ga0207658_10035052 3300025986 Bacteria 3592
220 Ga0207677_10465305 3300026023 Bacteria 1086
221 Ga0207703_10030460 3300026035 Bacteria 4265
222 Ga0207639_10065055 3300026041 Unclassified 2829
223 Ga0207648_10022939 3300026089 Bacteria 5597
224 Ga0207648_10053157 3300026089 Bacteria 3541
225 Ga0207648_10068292 3300026089 Bacteria 3097
226 Ga0207648_10459353 3300026089 Bacteria 1160
227 Ga0207676_10012198 3300026095 Bacteria 6154
228 Ga0207676_10026335 3300026095 Bacteria 4326
229 Ga0207674_10006392 3300026116 Bacteria 13869
230 Ga0207674_10010469 3300026116 Bacteria 10500
231 Ga0207674_10101583 3300026116 Bacteria 2856
232 Ga0207674_10134579 3300026116 Bacteria 2434
233 Ga0207674_10169825 3300026116 Bacteria 2135
234 Ga0207674_10430887 3300026116 Bacteria 1274
235 Ga0207674_10510726 3300026116 Unclassified 1161
236 Ga0207675_100003685 3300026118 Bacteria 14931
237 Ga0207675_100044945 3300026118 Bacteria 4126
238 Ga0207675_100153995 3300026118 Unclassified 2190
239 Ga0207698_10037565 3300026142 Unclassified 3569
240 Ga0207698_10189609 3300026142 Bacteria 1830
241 Ga0207428_10031556 3300027907 Bacteria 4368
242 Ga0268266_10358106 3300028379 Bacteria 1372
243 Ga0268265_10060068 3300028380 Bacteria 2912
244 Ga0268265_10092370 3300028380 Bacteria 2422
245 Ga0268265_10099706 3300028380 Bacteria 2342
246 Ga0268265_10311467 3300028380 Unclassified 1422
247 Ga0268264_10018867 3300028381 Bacteria 5639
248 Ga0268264_10068497 3300028381 Bacteria 2999
249 Ga0268264_10259967 3300028381 Unclassified 1617
250 Ga0307515_10000001 3300028794 Bacteria 4259510
251 Ga0307513_10321179 3300031456 Bacteria 1306
252 Ga0307410_10061514 3300031852 Unclassified 2570
253 Ga0307407_10031142 3300031903 Bacteria 2886
254 Ga0307412_10168612 3300031911 Bacteria 1635
255 Ga0307415_100354930 3300032126 Unclassified 1236
256 Ga0373927_0135507 3300035695 Bacteria 1609
257 Ga0395900_0189040 3300037418 Bacteria 2090
258 Ga0395905_0032338 3300037471 Bacteria 4920
259 Ga0395905_0398991 3300037471 Unclassified 1270
260 Ga0436365_0476759 3300039437 Bacteria 33326
261 Ga0436365_1176369 3300039437 Bacteria 1722
262 Ga0439436_0024443 3300041404 Bacteria 1783
263 Ga0451841_0543060 3300041498 Bacteria 2362
264 Ga0451853_2508821 3300041512 Bacteria 1721
265 Ga0439449_0006511 3300042007 Bacteria 4463
266 Ga0439449_0050898 3300042007 Bacteria 1532
267 Ga0439449_0061758 3300042007 Bacteria 1383
268 Ga0439457_001330 3300042014 Bacteria 7412
269 Ga0439462_0000717 3300042015 Bacteria 6814
270 Ga0450894_017026 3300042131 Bacteria 966
271 Ga0450898_001020 3300042134 Bacteria 3547
272 Ga0439434_0007690 3300042435 Bacteria 3158
273 Ga0439444_0009905 3300042437 Bacteria 1512
274 Ga0451577_0007517 3300042876 Bacteria 10706
275 Ga0451577_0231234 3300042876 Bacteria 1672
276 Ga0451577_0420245 3300042876 Unclassified 1214
277 Ga0466969_0005756 3300044656 Bacteria 6587
278 Ga0466972_0000044 3300044658 Bacteria 131031
279 Ga0466966_0071104 3300044684 Bacteria 2180
280 Ga0453684_0032450 3300044712 Bacteria 7309
281 Ga0453684_0096414 3300044712 Bacteria 3633
282 Ga0453684_0162759 3300044712 Bacteria 2637
283 Ga0466957_0004747 3300044842 Bacteria 7611
284 Ga0466959_0000045 3300045049 Bacteria 89773
285 Ga0451576_0340285 3300045051 Unclassified 1571
286 Ga0495643_0041975 3300046522 Bacteria 2493
287 Ga0495668_0001712 3300046616 Bacteria 20247
288 Ga0495672_0021672 3300047320 Bacteria 4188
289 Ga0495686_0004151 3300047472 Bacteria 12057
290 Ga0495686_0045300 3300047472 Bacteria 2783
291 Ga0501032_0009818 3300049569 Bacteria 6924
292 Ga0501034_0012323 3300049571 Bacteria 8833
293 Ga0501034_0085893 3300049571 Bacteria 3147
294 Ga0501037_0019916 3300049573 Bacteria 4952
295 Ga0501038_0020917 3300049574 Bacteria 5880
296 Ga0501039_0013687 3300049575 Bacteria 6203
297 Ga0501046_0143696 3300049580 Bacteria 1803
298 Ga0501047_0013337 3300049581 Bacteria 7787
299 Ga0501047_0038525 3300049581 Bacteria 4625
300 Ga0501047_0239687 3300049581 Bacteria 1665
301 Ga0501070_0034739 3300049586 Unclassified 4214
302 Ga0501071_0005322 3300049587 Bacteria 8259
303 Ga0501072_0003188 3300049588 Bacteria 12334
304 Ga0501074_0049454 3300049590 Unclassified 3035
305 Ga0501259_002513 3300049688 Bacteria 2964
306 Ga0501225_0029931 3300049705 Bacteria 1497
307 Ga0501245_001009 3300049708 Bacteria 3614
308 Ga0501079_0182279 3300049741 Unclassified 1639
309 Ga0501080_0078864 3300049742 Bacteria 3062
310 Ga0501266_000520 3300049763 Bacteria 5103
311 Ga0501044_0006409 3300049823 Bacteria 13008
312 Ga0501044_0008466 3300049823 Bacteria 11271
313 Ga0501044_0544884 3300049823 Unclassified 1058
314 nmdc:mga0k408_120044_c1 3300050493 Bacteria 1557
315 nmdc:mga0k408_260812_c1 3300050493 Bacteria 1035
316 nmdc:mga0k408_5440_c1 3300050493 Bacteria 6780
317 nmdc:mga09592_325443_c1 3300050508 Unclassified 1331
318 nmdc:mga09592_996_c1 3300050508 Bacteria 22453
319 nmdc:mga0qj67_128302_c1 3300050509 Bacteria 2052
320 nmdc:mga0qj67_4473_c1 3300050509 Bacteria 10127
321 nmdc:mga06r32_78098_c1 3300050510 Bacteria 3217
322 nmdc:mga08y16_95659_c1 3300050511 Bacteria 3094
323 Ga0500578_0000026 3300053086 Bacteria 145328
324 Ga0500578_0012559 3300053086 Bacteria 5463
325 Ga0500583_0000001 3300053092 Bacteria 241642
326 Ga0500642_0051540 3300053130 Bacteria 1819
327 Ga0500652_006727 3300053131 Bacteria 3720
328 Ga0500559_0072348 3300053136 Unclassified 1554
329 Ga0500616_0038569 3300053153 Bacteria 2580
330 Ga0500619_085130 3300053154 Bacteria 1065
331 Ga0500622_0005602 3300053156 Bacteria 7487
332 Ga0500639_070006 3300053163 Bacteria 1790
333 Ga0500611_000003 3300053727 Bacteria 333431
334 Ga0501082_0225026 3300060353 Unclassified 1632
335 2738725328 2738541278 Bacteria 9755573
336 2819679011 2818991460 Bacteria 7595395
337 2929924460 2929921140 Bacteria 8649150
338 8003155312 8003151029 Bacteria 8187759
339 Ga0466968_0020522
340 CNXas_1001028
341 JGI24740J21852_10006002
342 JGI24751J29686_10000926
343 JGI25154J39366_1000012
344 rootL2_10063468
345 rootH1_10025260
346 Ga0065712_10080740
347 Ga0065715_10128034
348 Ga0065707_10092797
349 Ga0065707_10126997
350 Ga0070658_10110811
351 Ga0070676_10131325
352 Ga0070683_100001333
353 Ga0070683_100006531
354 Ga0070683_100054054
355 Ga0070683_100123958
356 Ga0070670_100013775
357 Ga0070670_100049484
358 Ga0070670_100458195
359 Ga0070677_10007158
360 Ga0068869_100022496
361 Ga0068869_100024948
362 Ga0068869_100218933
363 Ga0070682_100041045
364 Ga0068868_100002869
365 Ga0068868_100072508
366 Ga0070660_100027525
367 Ga0070689_100152474
368 Ga0070661_100001786
369 Ga0070661_100155258
370 Ga0070669_100007052
371 Ga0070669_100046721
372 Ga0070675_100062154
373 Ga0070675_100091515
374 Ga0070675_100206839
375 Ga0070671_100066365
376 Ga0070673_100005500
377 Ga0070673_100041283
378 Ga0070673_100054311
379 Ga0070673_100114909
380 Ga0070659_100001791
381 Ga0070659_100038886
382 Ga0070678_100214402
383 Ga0070662_100005730
384 Ga0070662_100015287
385 Ga0068867_100020267
386 Ga0068867_100067758
387 Ga0068867_100104371
388 Ga0070685_10057255
389 Ga0070685_10318148
390 Ga0070698_100002541
391 Ga0070698_100071444
392 Ga0070699_100132666
393 Ga0070684_100008678
394 Ga0070684_100008748
395 Ga0070684_100166134
396 Ga0070684_100319237
397 Ga0068853_100005466
398 Ga0068853_100306517
399 Ga0070672_100111023
400 Ga0070672_100269474
401 Ga0070665_100082620
402 Ga0068855_100179158
403 Ga0068855_100212300
404 Ga0070664_100032775
405 Ga0070664_100133252
406 Ga0070664_100170355
407 Ga0068857_100004228
408 Ga0068857_100023495
409 Ga0068857_100110824
410 Ga0068857_100116004
411 Ga0068856_100036881
412 Ga0068852_100002826
413 Ga0068852_100012324
414 Ga0068852_100035036
415 Ga0068852_100080328
416 Ga0068852_100334476
417 Ga0068852_100611175
418 Ga0068859_100010593
419 Ga0068859_100075224
420 Ga0068859_100092502
421 Ga0068859_100449927
422 Ga0068864_100025644
423 Ga0068864_100036735
424 Ga0068864_100036790
425 Ga0068864_100039861
426 Ga0068864_100118646
427 Ga0068866_10266605
428 Ga0068861_100082487
429 Ga0068861_100086030
430 Ga0068861_100421861
431 Ga0068863_100040774
432 Ga0068863_100540137
433 Ga0068858_100034751
434 Ga0068860_100005406
435 Ga0068860_100070298
436 Ga0068860_100150851
437 Ga0068862_100028774
438 Ga0068862_100106598
439 Ga0075366_10011054
440 Ga0097621_100213052
441 Ga0097621_100265509
442 Ga0068871_100136757
443 Ga0068871_100200928
444 Ga0068871_100471519
445 Ga0075428_100000822
446 Ga0075428_100014821
447 Ga0075430_100001793
448 Ga0075430_100034380
449 Ga0075431_100139712
450 Ga0075429_100000136
451 Ga0075429_100236235
452 Ga0068865_100088043
453 Ga0097620_100010593
454 Ga0097620_100075225
455 Ga0097620_100092500
456 Ga0097620_100449897
457 Ga0105251_10063766
458 Ga0111539_10005877
459 Ga0105247_10012665
460 Ga0105247_10140411
461 Ga0114129_10041765
462 Ga0114129_10136959
463 Ga0105248_10112072
464 Ga0105237_10166562
465 Ga0105237_10268280
466 Ga0105249_10000434
467 Ga0105249_10001213
468 Ga0105249_10001820
469 Ga0105249_10007152
470 Ga0105249_10055910
471 Ga0105249_10077209
472 Ga0105249_10077871
473 Ga0105249_10420187
474 Ga0105239_10000360
475 Ga0157370_10124240
476 Ga0157369_10047525
477 Ga0157374_10026127
478 Ga0157374_10066499
479 Ga0157374_10122181
480 Ga0157374_10543543
481 Ga0157378_10050544
482 Ga0157378_10188934
483 Ga0157378_10405612
484 Ga0163162_10001237
485 Ga0163162_10029880
486 Ga0157372_10003572
487 Ga0157372_10060646
488 Ga0157372_10328166
489 Ga0157375_10032634
490 Ga0157375_10050706
491 Ga0157375_10086704
492 Ga0157375_10177845
493 Ga0163163_10001217
494 Ga0163163_10036545
495 Ga0163163_10153702
496 Ga0157380_10022591
497 Ga0157380_10060369
498 Ga0157377_10158080
499 Ga0157376_10319865
500 Ga0163161_10270049
501 Ga0163161_10407318
502 Ga0213876_10000697
503 Ga0209646_1000009
504 Ga0209646_1003205
505 Ga0209026_1000221
506 Ga0209758_1004411
507 Ga0207426_1000477
508 Ga0207697_10101275
509 Ga0207682_10027707
510 Ga0207710_10010538
511 Ga0207680_10261181
512 Ga0207647_10000794
513 Ga0207647_10171906
514 Ga0207645_10046527
515 Ga0207645_10157604
516 Ga0207671_10140623
517 Ga0207671_10159841
518 Ga0207657_10095633
519 Ga0207649_10007571
520 Ga0207649_10142249
521 Ga0207681_10015301
522 Ga0207681_10057734
523 Ga0207650_10002238
524 Ga0207650_10139375
525 Ga0207659_10004579
526 Ga0207659_10082982
527 Ga0207659_10217838
528 Ga0207644_10271759
529 Ga0207706_10022973
530 Ga0207706_10034619
531 Ga0207670_10042139
532 Ga0207704_10309142
533 Ga0207689_10000843
534 Ga0207689_10021233
535 Ga0207689_10044881
536 Ga0207689_10222311
537 Ga0207661_10004262
538 Ga0207661_10013819
539 Ga0207661_10046201
540 Ga0207661_10061105
541 Ga0207661_10097436
542 Ga0207661_10340788
543 Ga0207679_10000297
544 Ga0207679_10017026
545 Ga0207679_10019037
546 Ga0207679_10052335
547 Ga0207679_10388855
548 Ga0207651_10003504
549 Ga0207651_10011992
550 Ga0207651_10110643
551 Ga0207712_10001032
552 Ga0207712_10001781
553 Ga0207712_10003001
554 Ga0207712_10060488
555 Ga0207712_10075031
556 Ga0207668_10044572
557 Ga0207658_10035052
558 Ga0207677_10465305
559 Ga0207703_10030460
560 Ga0207639_10065055
561 Ga0207648_10022939
562 Ga0207648_10053157
563 Ga0207648_10068292
564 Ga0207648_10459353
565 Ga0207676_10012198
566 Ga0207676_10026335
567 Ga0207674_10006392
568 Ga0207674_10010469
569 Ga0207674_10101583
570 Ga0207674_10134579
571 Ga0207674_10169825
572 Ga0207674_10430887
573 Ga0207674_10510726
574 Ga0207675_100003685
575 Ga0207675_100044945
576 Ga0207675_100153995
577 Ga0207698_10037565
578 Ga0207698_10189609
579 Ga0207428_10031556
580 Ga0268266_10358106
581 Ga0268265_10060068
582 Ga0268265_10092370
583 Ga0268265_10099706
584 Ga0268265_10311467
585 Ga0268264_10018867
586 Ga0268264_10068497
587 Ga0268264_10259967
588 Ga0307515_10000001
589 Ga0307513_10321179
590 Ga0307410_10061514
591 Ga0307407_10031142
592 Ga0307412_10168612
593 Ga0307415_100354930
594 Ga0373927_0135507
595 Ga0395900_0189040
596 Ga0395905_0032338
597 Ga0395905_0398991
598 Ga0436365_0476759
599 Ga0436365_1176369
600 Ga0439436_0024443
601 Ga0451841_0543060
602 Ga0451853_2508821
603 Ga0439449_0006511
604 Ga0439449_0050898
605 Ga0439449_0061758
606 Ga0439457_001330
607 Ga0439462_0000717
608 Ga0450894_017026
609 Ga0450898_001020
610 Ga0439434_0007690
611 Ga0439444_0009905
612 Ga0451577_0007517
613 Ga0451577_0231234
614 Ga0451577_0420245
615 Ga0466969_0005756
616 Ga0466972_0000044
617 Ga0466966_0071104
618 Ga0453684_0032450
619 Ga0453684_0096414
620 Ga0453684_0162759
621 Ga0466957_0004747
622 Ga0466959_0000045
623 Ga0451576_0340285
624 Ga0495643_0041975
625 Ga0495668_0001712
626 Ga0495672_0021672
627 Ga0495686_0004151
628 Ga0495686_0045300
629 Ga0501032_0009818
630 Ga0501034_0012323
631 Ga0501034_0085893
632 Ga0501037_0019916
633 Ga0501038_0020917
634 Ga0501039_0013687
635 Ga0501046_0143696
636 Ga0501047_0013337
637 Ga0501047_0038525
638 Ga0501047_0239687
639 Ga0501070_0034739
640 Ga0501071_0005322
641 Ga0501072_0003188
642 Ga0501074_0049454
643 Ga0501259_002513
644 Ga0501225_0029931
645 Ga0501245_001009
646 Ga0501079_0182279
647 Ga0501080_0078864
648 Ga0501266_000520
649 Ga0501044_0006409
650 Ga0501044_0008466
651 Ga0501044_0544884
652 nmdc:mga0k408_120044_c1
653 nmdc:mga0k408_260812_c1
654 nmdc:mga0k408_5440_c1
655 nmdc:mga09592_325443_c1
656 nmdc:mga09592_996_c1
657 nmdc:mga0qj67_128302_c1
658 nmdc:mga0qj67_4473_c1
659 nmdc:mga06r32_78098_c1
660 nmdc:mga08y16_95659_c1
661 Ga0500578_0000026
662 Ga0500578_0012559
663 Ga0500583_0000001
664 Ga0500642_0051540
665 Ga0500652_006727
666 Ga0500559_0072348
667 Ga0500616_0038569
668 Ga0500619_085130
669 Ga0500622_0005602
670 Ga0500639_070006
671 Ga0500611_000003
672 Ga0501082_0225026
673 2738725328
674 2819679011
675 2929924460
676 8003155312

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13354

Beta-lactamase2

Beta-lactamase enzyme family

80

295

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2j8y-assembly2.cif.gz_B structure of pbp-a acyl-enzyme complex with penicillin-g 0.8757 20 289
2jbf-assembly3.cif.gz_C structure of pbp-a, l158e mutant. acyl-enzyme complex with penicillin- g. 0.8739 20 289
4ewf-assembly4.cif.gz_D the crystal structure of beta-lactamase from sphaerobacter thermophilus dsm 20745 0.8613 23 285
2jbf-assembly3.cif.gz_C structure of pbp-a, l158e mutant. acyl-enzyme complex with penicillin- g. 0.8583 20 289
6z24-assembly1.cif.gz_A acylenzyme complex of ceftazidime bound to deacylation mutant kpc-2 (e166q) 0.8575 30 259
ID Description Score Start End Superfamily
2j7vB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8747 21 291 3.40.710.10
2j7vB01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8685 21 291 3.40.710.10
1g6aA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8489 24 288 3.40.710.10
5hw3A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8418 26 288 3.40.710.10
5x5gA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8364 24 286 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A1J5SM31-F1-model_v4 Carbapenem-hydrolyzing beta-lactamase Sme-1 (EC 3.5.2.6) 0.9707 20 288 GO:0008800
GO:0030655
GO:0046677
AF-A0A1G9BA37-F1-model_v4 Beta-lactamase class A 0.9603 20 297 GO:0008800
GO:0030655
GO:0046677
AF-A0A4Q6AA12-F1-model_v4 Serine hydrolase 0.9569 19 224 GO:0008800
GO:0030655
GO:0046677
AF-A0A2W5ETQ7-F1-model_v4 Serine hydrolase 0.9532 19 298 GO:0008800
GO:0030655
GO:0046677
AF-A0A7L5DMZ6-F1-model_v4 Serine hydrolase 0.9525 24 297 GO:0008800
GO:0030655
GO:0046677

Map