F413767

General Info

Members Datasets Scaffolds Average Seq Length
339 196 331 672

Family's Representative Sequence

Representative Sequence 3300002459|JGI24751J29686_10000185|JGI24751J29686_1000018520
Length 810
Sequence MTPTKLLIGQIIVVFAIVLAGIWSATQWAAASLLYQPELGLPCAMIGGVPIYRPWAIFLWWYHFDAYAPHVFDRAGAIAGASGFIGCGAAVAGSLWRARQRRNVTTYGSAHWASAREATAAGLFSDRGIFLGRLGERYLRHDGPEHIMAFAPTRSGKGVGLVVPTLLGWSGSTVIHDIKGENWQLTAGWRARFSHCLLFNPTDARSARYNPLLEVRRGADEVRDVQNIADILVDPEGALDRRNHWEKTSHSLLVGAILHILYADADKTLARVATFLSDPQRPFVATLRVMMTTNHLGASDAPIAHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPTVAAVTAASDWRIADLVEGDHPVSLYLVVPPSDISRTKPLIRLVLNQIGRRLTEHLHAENKPGRHRLLMMLDEFPALGRLDFFETSLAFLAGYGVRAFLIAQSLNQIEKAYGEHNAILDNCHVRVAFATNDERTAKRISDALGTATEQRAMRNYAGHRLAPWLAHVMVSRQETARALLTPGEVMQLPPVDELVLVAGHAPVRAKKLRYYEDRTFKARVLPAPLLGAGGYADLPNARADDWRDHVRGTDSRLGEVADEERDADSGGGLEQVRHPAHELEPQAPVDLAPADVLGLGDDDTDAAQRQAGNGPGPVACRFPRSLRHRFRVGTSRRSSAGLLTMVDKVRHQLFLPRPLSDRLEALAAKPGATKSAILADALTAWLDRRGSSELDDRFGLRLDRMTGALSRIERDGYVLLETLALFIRFELSIQAPLADGDQAGRAIGRERFEAFVTQVGRQVAAGRRTIGAEHDR

Samples

Sample ID Description Type Environment
1 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
2 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
3 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
4 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
5 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
6 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
7 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
8 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
9 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
10 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
11 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
12 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
13 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
24 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
34 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
35 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
36 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
37 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
42 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
43 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
48 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
49 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
50 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
51 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
52 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
59 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
60 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
61 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
62 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
63 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
64 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
65 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
66 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
69 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
70 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
71 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
72 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
73 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
74 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
87 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
89 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
94 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
135 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
138 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
139 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
140 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
141 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
142 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
147 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
148 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
149 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
150 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
151 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
152 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
162 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
165 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
166 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
167 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
170 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
171 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
172 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
173 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
174 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
175 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
176 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
179 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
180 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
181 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
184 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
185 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
186 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
187 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
188 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
189 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
190 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
194 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
195 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
196 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.64
Metatranscriptomes 0
Isolates 2.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.76
Nodule 0
Rhizoplane 2.36
Rhizosphere 70.21
Stem 0
Stem Tuber 0
Unclassified 7.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10000278 3300001990 Bacteria 16897
2 JGI24735J21928_10000237 3300002067 Bacteria 19491
3 JGI24735J21928_10002609 3300002067 Bacteria 6229
4 JGI24738J21930_10000016 3300002075 Bacteria 31228
5 JGI24751J29686_10000185 3300002459 Bacteria 27999
6 JGI25165J46597_1000010 3300003214 Bacteria 442113
7 JGI25165J46597_1000085 3300003214 Bacteria 171345
8 JGI25153J46596_10000007 3300003215 Bacteria 377573
9 Ga0055526_1000273 3300003771 Bacteria 43650
10 Ga0055526_1000650 3300003771 Bacteria 26887
11 Ga0055537_1001696 3300003773 Bacteria 8163
12 Ga0055537_1002040 3300003773 Bacteria 7136
13 Ga0055530_10000249 3300003791 Bacteria 48825
14 Ga0055530_10000841 3300003791 Bacteria 25296
15 Ga0055530_10001582 3300003791 Bacteria 16291
16 Ga0055540_1002217 3300003792 Bacteria 10546
17 Ga0055540_1002290 3300003792 Bacteria 10316
18 Ga0055531_10000008 3300003794 Bacteria 222269
19 Ga0055531_10000297 3300003794 Bacteria 49449
20 Ga0055531_10000843 3300003794 Bacteria 25296
21 Ga0055531_10022386 3300003794 Bacteria 2410
22 Ga0065165_1000213 3300005262 Bacteria 100746
23 Ga0065165_1002545 3300005262 Bacteria 15116
24 Ga0070658_10000050 3300005327 Bacteria 119052
25 Ga0070658_10000952 3300005327 Bacteria 24760
26 Ga0070658_10001343 3300005327 Bacteria 20994
27 Ga0070658_10015553 3300005327 Bacteria 6085
28 Ga0070658_10068752 3300005327 Bacteria 2896
29 Ga0070670_100000008 3300005331 Bacteria 292132
30 Ga0070670_100092245 3300005331 Bacteria 2604
31 Ga0070666_10002159 3300005335 Bacteria 11952
32 Ga0070680_100003393 3300005336 Bacteria 11889
33 Ga0068868_100000014 3300005338 Bacteria 108275
34 Ga0070660_100000005 3300005339 Bacteria 169758
35 Ga0070660_100003850 3300005339 Bacteria 10366
36 Ga0070660_100104959 3300005339 Bacteria 2242
37 Ga0070691_10012503 3300005341 Bacteria 3888
38 Ga0070661_100000018 3300005344 Bacteria 135723
39 Ga0070668_100007089 3300005347 Bacteria 8304
40 Ga0070668_100022981 3300005347 Bacteria 4714
41 Ga0070669_100000192 3300005353 Bacteria 53873
42 Ga0070671_100000065 3300005355 Bacteria 71901
43 Ga0070667_100000523 3300005367 Bacteria 38602
44 Ga0070667_100000921 3300005367 Bacteria 27190
45 Ga0070705_100000777 3300005440 Bacteria 18013
46 Ga0070705_100002621 3300005440 Bacteria 8998
47 Ga0070700_100003822 3300005441 Bacteria 7803
48 Ga0070694_100000560 3300005444 Bacteria 20537
49 Ga0070694_100002060 3300005444 Bacteria 11922
50 Ga0070708_100006928 3300005445 Bacteria 9043
51 Ga0070663_100009748 3300005455 Bacteria 5962
52 Ga0070662_100006638 3300005457 Bacteria 7473
53 Ga0070662_100031290 3300005457 Bacteria 3734
54 Ga0070699_100003816 3300005518 Bacteria 13317
55 Ga0070699_100008196 3300005518 Bacteria 9067
56 Ga0070679_100029869 3300005530 Bacteria 5378
57 Ga0070697_100032915 3300005536 Bacteria 4174
58 Ga0070695_100000679 3300005545 Bacteria 18189
59 Ga0070695_100000769 3300005545 Bacteria 17252
60 Ga0070696_100000955 3300005546 Bacteria 18738
61 Ga0070696_100002024 3300005546 Bacteria 13302
62 Ga0070704_100000293 3300005549 Bacteria 21969
63 Ga0070704_100003849 3300005549 Bacteria 8639
64 Ga0068855_100000648 3300005563 Bacteria 42506
65 Ga0068855_100002262 3300005563 Bacteria 23756
66 Ga0068855_100002703 3300005563 Bacteria 21855
67 Ga0068855_100002891 3300005563 Bacteria 21015
68 Ga0068855_100004178 3300005563 Bacteria 17624
69 Ga0068855_100020346 3300005563 Bacteria 7961
70 Ga0068857_100007200 3300005577 Bacteria 9580
71 Ga0068857_100039662 3300005577 Bacteria 4172
72 Ga0068857_100041187 3300005577 Bacteria 4096
73 Ga0068854_100000071 3300005578 Bacteria 73211
74 Ga0068854_100000429 3300005578 Bacteria 26035
75 Ga0068856_100002450 3300005614 Bacteria 19090
76 Ga0068856_100002829 3300005614 Bacteria 17769
77 Ga0068856_100003561 3300005614 Bacteria 15682
78 Ga0068856_100009134 3300005614 Bacteria 9640
79 Ga0068856_100028708 3300005614 Bacteria 5434
80 Ga0068852_100000850 3300005616 Bacteria 20287
81 Ga0068852_100001043 3300005616 Bacteria 18237
82 Ga0068859_100003882 3300005617 Bacteria 15261
83 Ga0068864_100000027 3300005618 Bacteria 229759
84 Ga0068864_100037495 3300005618 Bacteria 4137
85 Ga0068861_100000017 3300005719 Bacteria 78362
86 Ga0068861_100000124 3300005719 Bacteria 39677
87 Ga0068861_100000201 3300005719 Bacteria 31934
88 Ga0068851_10000145 3300005834 Bacteria 37857
89 Ga0068863_100000168 3300005841 Bacteria 70935
90 Ga0068863_100000311 3300005841 Bacteria 49437
91 Ga0068858_100057143 3300005842 Bacteria 3606
92 Ga0068860_100003897 3300005843 Bacteria 15334
93 Ga0068860_100012391 3300005843 Bacteria 8402
94 Ga0068860_100017593 3300005843 Bacteria 6965
95 Ga0068862_100002796 3300005844 Bacteria 15285
96 Ga0068862_100007218 3300005844 Bacteria 9226
97 Ga0075365_10000257 3300006038 Bacteria 18222
98 Ga0075368_10000089 3300006042 Bacteria 22773
99 Ga0075363_100000275 3300006048 Bacteria 14868
100 Ga0075364_10000007 3300006051 Bacteria 73806
101 Ga0075362_10000811 3300006177 Bacteria 9337
102 Ga0075367_10000162 3300006178 Bacteria 20993
103 Ga0075366_10000227 3300006195 Bacteria 25083
104 Ga0075370_10000371 3300006353 Bacteria 16477
105 Ga0068865_100000006 3300006881 Bacteria 201186
106 Ga0097620_100003882 3300006931 Bacteria 15261
107 Ga0105251_10007296 3300009011 Bacteria 6845
108 Ga0105240_10002001 3300009093 Bacteria 33626
109 Ga0105240_10005353 3300009093 Bacteria 19142
110 Ga0105240_10007247 3300009093 Bacteria 16146
111 Ga0105245_10007588 3300009098 Bacteria 9498
112 Ga0105243_10001647 3300009148 Bacteria 19389
113 Ga0105243_10088621 3300009148 Bacteria 2542
114 Ga0105248_10006066 3300009177 Bacteria 13266
115 Ga0105237_10006206 3300009545 Bacteria 13327
116 Ga0105237_10016163 3300009545 Bacteria 7763
117 Ga0105238_10010581 3300009551 Bacteria 9263
118 Ga0105238_10017365 3300009551 Bacteria 7309
119 Ga0105238_10037189 3300009551 Bacteria 4949
120 Ga0105249_10003567 3300009553 Bacteria 13469
121 Ga0105249_10012383 3300009553 Bacteria 7517
122 Ga0105239_10001072 3300010375 Bacteria 38035
123 Ga0105239_10014711 3300010375 Bacteria 8677
124 Ga0105239_10039073 3300010375 Bacteria 5199
125 Ga0105239_10071241 3300010375 Bacteria 3819
126 Ga0105239_10128910 3300010375 Bacteria 2812
127 Ga0157371_10000011 3300013102 Bacteria 377608
128 Ga0157371_10001637 3300013102 Bacteria 22913
129 Ga0157371_10006127 3300013102 Bacteria 9995
130 Ga0157371_10046298 3300013102 Bacteria 3094
131 Ga0157370_10000266 3300013104 Bacteria 66475
132 Ga0157370_10000782 3300013104 Bacteria 39909
133 Ga0157369_10000213 3300013105 Bacteria 80715
134 Ga0157369_10000220 3300013105 Bacteria 79213
135 Ga0157369_10000339 3300013105 Bacteria 62060
136 Ga0157369_10000632 3300013105 Bacteria 45648
137 Ga0157378_10000050 3300013297 Bacteria 102138
138 Ga0157378_10000451 3300013297 Bacteria 39296
139 Ga0157372_10001385 3300013307 Bacteria 26160
140 Ga0157372_10005352 3300013307 Bacteria 13636
141 Ga0157380_10000029 3300014326 Bacteria 98248
142 Ga0157379_10000493 3300014968 Bacteria 32094
143 Ga0157376_10011135 3300014969 Bacteria 6617
144 Ga0163161_10002136 3300017792 Bacteria 14256
145 Ga0213875_10021129 3300021388 Bacteria 3121
146 Ga0207427_100382 3300025231 Bacteria 26671
147 Ga0209233_1000044 3300025261 Bacteria 489783
148 Ga0209233_1000078 3300025261 Bacteria 348118
149 Ga0209565_1000446 3300025263 Bacteria 32698
150 Ga0209673_1003679 3300025273 Bacteria 8838
151 Ga0209676_1001158 3300025292 Bacteria 28717
152 Ga0209676_1003359 3300025292 Bacteria 9975
153 Ga0209564_1000069 3300025295 Bacteria 303332
154 Ga0209564_1001310 3300025295 Bacteria 26723
155 Ga0209758_1000017 3300025297 Bacteria 754393
156 Ga0209050_1000001 3300025298 Bacteria 3563507
157 Ga0209050_1000005 3300025298 Bacteria 1557793
158 Ga0209050_1000026 3300025298 Bacteria 499134
159 Ga0209051_1000269 3300025303 Bacteria 87137
160 Ga0209051_1001006 3300025303 Bacteria 27083
161 Ga0209257_1000009 3300025304 Bacteria 1205047
162 Ga0209257_1000111 3300025304 Bacteria 234809
163 Ga0209257_1000485 3300025304 Bacteria 71633
164 Ga0209257_1001263 3300025304 Bacteria 31108
165 Ga0209257_1010469 3300025304 Bacteria 4685
166 Ga0207656_10000058 3300025321 Bacteria 43858
167 Ga0207680_10014106 3300025903 Bacteria 4123
168 Ga0207647_10001963 3300025904 Bacteria 15714
169 Ga0207647_10006931 3300025904 Bacteria 8213
170 Ga0207647_10057947 3300025904 Bacteria 2373
171 Ga0207705_10000014 3300025909 Bacteria 434286
172 Ga0207705_10000071 3300025909 Bacteria 128862
173 Ga0207705_10001036 3300025909 Bacteria 22605
174 Ga0207705_10001280 3300025909 Bacteria 20170
175 Ga0207705_10024230 3300025909 Bacteria 4332
176 Ga0207654_10000577 3300025911 Bacteria 20701
177 Ga0207695_10001678 3300025913 Bacteria 35629
178 Ga0207695_10015586 3300025913 Bacteria 8941
179 Ga0207695_10024650 3300025913 Bacteria 6757
180 Ga0207695_10025366 3300025913 Bacteria 6638
181 Ga0207695_10074468 3300025913 Bacteria 3457
182 Ga0207671_10002345 3300025914 Bacteria 20412
183 Ga0207671_10003299 3300025914 Bacteria 16238
184 Ga0207671_10015088 3300025914 Bacteria 6071
185 Ga0207660_10008830 3300025917 Bacteria 6512
186 Ga0207657_10000020 3300025919 Bacteria 157826
187 Ga0207657_10000052 3300025919 Bacteria 108384
188 Ga0207657_10003535 3300025919 Bacteria 16692
189 Ga0207657_10020672 3300025919 Bacteria 6216
190 Ga0207649_10000034 3300025920 Bacteria 136049
191 Ga0207652_10004820 3300025921 Bacteria 10926
192 Ga0207681_10000037 3300025923 Bacteria 154417
193 Ga0207681_10005596 3300025923 Bacteria 7716
194 Ga0207694_10008249 3300025924 Bacteria 7873
195 Ga0207694_10009789 3300025924 Bacteria 7234
196 Ga0207694_10012867 3300025924 Bacteria 6302
197 Ga0207650_10000019 3300025925 Bacteria 344751
198 Ga0207650_10000020 3300025925 Bacteria 342596
199 Ga0207650_10064477 3300025925 Bacteria 2743
200 Ga0207687_10087178 3300025927 Bacteria 2268
201 Ga0207644_10000045 3300025931 Bacteria 105495
202 Ga0207706_10002218 3300025933 Bacteria 18959
203 Ga0207706_10014010 3300025933 Bacteria 7270
204 Ga0207709_10001104 3300025935 Bacteria 19781
205 Ga0207704_10000022 3300025938 Bacteria 146109
206 Ga0207689_10005004 3300025942 Bacteria 11936
207 Ga0207667_10000007 3300025949 Bacteria 630590
208 Ga0207667_10001647 3300025949 Bacteria 28143
209 Ga0207667_10005065 3300025949 Bacteria 16100
210 Ga0207667_10025575 3300025949 Bacteria 6459
211 Ga0207667_10032622 3300025949 Bacteria 5609
212 Ga0207712_10005126 3300025961 Bacteria 8293
213 Ga0207712_10005345 3300025961 Bacteria 8109
214 Ga0207668_10000560 3300025972 Bacteria 23318
215 Ga0207668_10017558 3300025972 Bacteria 4485
216 Ga0207668_10069574 3300025972 Bacteria 2506
217 Ga0207640_10000073 3300025981 Bacteria 79417
218 Ga0207640_10000086 3300025981 Bacteria 73224
219 Ga0207640_10001633 3300025981 Bacteria 12012
220 Ga0207640_10003833 3300025981 Bacteria 8113
221 Ga0207658_10000734 3300025986 Bacteria 28263
222 Ga0207677_10000164 3300026023 Bacteria 52688
223 Ga0207703_10002625 3300026035 Bacteria 15510
224 Ga0207639_10016667 3300026041 Bacteria 5204
225 Ga0207678_10015220 3300026067 Bacteria 6766
226 Ga0207708_10025666 3300026075 Bacteria 4459
227 Ga0207702_10000147 3300026078 Bacteria 82633
228 Ga0207702_10000470 3300026078 Bacteria 45673
229 Ga0207702_10002118 3300026078 Bacteria 19107
230 Ga0207702_10002249 3300026078 Bacteria 18507
231 Ga0207702_10020478 3300026078 Bacteria 5476
232 Ga0207641_10000241 3300026088 Bacteria 71027
233 Ga0207641_10000300 3300026088 Bacteria 61832
234 Ga0207648_10006939 3300026089 Bacteria 11216
235 Ga0207676_10000022 3300026095 Bacteria 296286
236 Ga0207674_10007929 3300026116 Bacteria 12330
237 Ga0207674_10010260 3300026116 Bacteria 10629
238 Ga0207674_10018252 3300026116 Bacteria 7629
239 Ga0207674_10052287 3300026116 Bacteria 4167
240 Ga0207674_10069235 3300026116 Bacteria 3550
241 Ga0207675_100000018 3300026118 Bacteria 124200
242 Ga0207675_100000458 3300026118 Bacteria 39635
243 Ga0207675_100008477 3300026118 Bacteria 9683
244 Ga0207698_10000182 3300026142 Bacteria 38622
245 Ga0209813_10000073 3300027866 Bacteria 37553
246 Ga0268265_10000937 3300028380 Bacteria 26824
247 Ga0268265_10001489 3300028380 Bacteria 19623
248 Ga0268264_10002087 3300028381 Bacteria 17845
249 Ga0268264_10003502 3300028381 Bacteria 13532
250 Ga0268264_10003542 3300028381 Bacteria 13440
251 Ga0307517_10018189 3300028786 Bacteria 9106
252 Ga0307517_10023276 3300028786 Bacteria 7708
253 Ga0265338_10000572 3300028800 Bacteria 64902
254 Ga0307408_100001589 3300031548 Bacteria 16769
255 Ga0307411_10011546 3300032005 Bacteria 4774
256 Ga0307510_10017772 3300033180 Bacteria 8379
257 Ga0307510_10025005 3300033180 Bacteria 6895
258 Ga0395899_0000366 3300037312 Bacteria 54708
259 Ga0395899_0000495 3300037312 Bacteria 43859
260 Ga0395900_0000756 3300037418 Bacteria 42958
261 Ga0395900_0002438 3300037418 Bacteria 20491
262 Ga0395900_0008506 3300037418 Bacteria 10551
263 Ga0395900_0041578 3300037418 Bacteria 4738
264 Ga0395898_0008957 3300037466 Bacteria 10537
265 Ga0395905_0000033 3300037471 Bacteria 279363
266 Ga0395905_0000231 3300037471 Bacteria 84714
267 Ga0395905_0064444 3300037471 Bacteria 3429
268 Ga0395905_0085518 3300037471 Bacteria 2955
269 Ga0436364_0453193 3300037853 Bacteria 7948
270 Ga0395901_0000108 3300038443 Bacteria 113046
271 Ga0395901_0001371 3300038443 Bacteria 25494
272 Ga0395901_0091480 3300038443 Bacteria 3185
273 Ga0466966_0000019 3300044684 Bacteria 120521
274 Ga0466961_0002709 3300044693 Bacteria 11008
275 Ga0495650_0002842 3300046471 Bacteria 13251
276 Ga0495670_0000008 3300046691 Bacteria 219555
277 Ga0495687_000200 3300047443 Bacteria 85752
278 Ga0495686_0000892 3300047472 Bacteria 37606
279 Ga0495686_0000985 3300047472 Bacteria 34770
280 Ga0496102_0005477 3300048905 Bacteria 10767
281 Ga0496102_0110798 3300048905 Bacteria 2559
282 Ga0496103_0006590 3300048906 Bacteria 6925
283 Ga0496105_0010365 3300048908 Bacteria 7327
284 Ga0496106_0000212 3300048909 Bacteria 40609
285 Ga0496106_0003056 3300048909 Bacteria 12466
286 Ga0496115_0052091 3300048918 Bacteria 3283
287 Ga0496116_0000039 3300048919 Bacteria 349134
288 Ga0496118_0029330 3300048921 Bacteria 4616
289 Ga0496119_0005780 3300048922 Bacteria 11710
290 Ga0496120_0011076 3300048923 Bacteria 6224
291 Ga0496121_0059825 3300048924 Bacteria 3139
292 Ga0496122_0001993 3300048925 Bacteria 30434
293 Ga0496122_0018777 3300048925 Bacteria 6360
294 Ga0496123_0001459 3300048926 Bacteria 32922
295 Ga0496124_0000011 3300048927 Bacteria 524145
296 Ga0496124_0000501 3300048927 Bacteria 67326
297 Ga0496125_0003553 3300048928 Bacteria 18780
298 Ga0496126_0000041 3300048929 Bacteria 340389
299 Ga0496126_0011002 3300048929 Bacteria 9413
300 Ga0496126_0013951 3300048929 Bacteria 8151
301 Ga0501300_000996 3300049523 Bacteria 4328
302 Ga0501222_001090 3300049662 Bacteria 3847
303 Ga0501233_000008 3300049668 Bacteria 34986
304 Ga0501249_000057 3300049679 Bacteria 40985
305 Ga0501249_000114 3300049679 Bacteria 24796
306 Ga0501261_000040 3300049690 Bacteria 25841
307 Ga0501225_0000103 3300049705 Bacteria 26604
308 Ga0501234_002611 3300049707 Bacteria 2837
309 Ga0501245_000040 3300049708 Bacteria 11993
310 Ga0501044_0016423 3300049823 Bacteria 7946
311 Ga0501226_000021 3300049853 Bacteria 127141
312 nmdc:mga03683_161_c1 3300050489 Bacteria 22524
313 nmdc:mga03n38_3_c1 3300050490 Bacteria 77674
314 nmdc:mga00v17_29_c1 3300050491 Bacteria 89620
315 nmdc:mga0yw44_418_c1 3300050492 Bacteria 14894
316 nmdc:mga0k408_375_c1 3300050493 Bacteria 24427
317 nmdc:mga06z11_892_c1 3300050494 Bacteria 10868
318 nmdc:mga04h51_15_c1 3300050495 Bacteria 76646
319 nmdc:mga07m45_5_c2 3300050496 Bacteria 297012
320 nmdc:mga0sz30_132_c1 3300050516 Bacteria 27621
321 Ga0500643_001161 3300053087 Bacteria 15704
322 Ga0500643_001443 3300053087 Bacteria 13695
323 Ga0500643_003872 3300053087 Bacteria 6965
324 Ga0500566_0005110 3300053094 Bacteria 7822
325 Ga0500592_000002 3300053116 Bacteria 141670
326 Ga0500568_0001781 3300053139 Bacteria 13272
327 Ga0500616_0000124 3300053153 Bacteria 135532
328 Ga0500624_000002 3300053157 Bacteria 257900
329 Ga0500627_0000026 3300053158 Bacteria 100362
330 Ga0500639_014485 3300053163 Bacteria 4149
331 Ga0500625_000016 3300053729 Bacteria 102090

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300028800 Ga0265338_10000572 Ga0265338_1000057224 634
2 3300037471 Ga0395905_0000033 Ga0395905_0000033_86365_88362 635
3 3300005341 Ga0070691_10012503 Ga0070691_100125034 641
4 3300005440 Ga0070705_100002621 Ga0070705_1000026216 641
5 3300005441 Ga0070700_100003822 Ga0070700_1000038229 641
6 3300005444 Ga0070694_100000560 Ga0070694_1000005606 641
7 3300005455 Ga0070663_100009748 Ga0070663_1000097483 641
8 3300005518 Ga0070699_100008196 Ga0070699_1000081966 641
9 3300005536 Ga0070697_100032915 Ga0070697_1000329151 641
10 3300005545 Ga0070695_100000679 Ga0070695_10000067913 641
11 3300005546 Ga0070696_100000955 Ga0070696_1000009553 641
12 3300005549 Ga0070704_100000293 Ga0070704_10000029322 641
13 3300005617 Ga0068859_100003882 Ga0068859_1000038824 641
14 3300005618 Ga0068864_100037495 Ga0068864_1000374952 641
15 3300005843 Ga0068860_100012391 Ga0068860_1000123914 641
16 3300005844 Ga0068862_100007218 Ga0068862_1000072186 641
17 3300006931 Ga0097620_100003882 Ga0097620_1000038824 641
18 3300009553 Ga0105249_10003567 Ga0105249_100035676 641
19 3300025961 Ga0207712_10005345 Ga0207712_100053458 641
20 3300028380 Ga0268265_10000937 Ga0268265_1000093721 641
21 3300028381 Ga0268264_10002087 Ga0268264_1000208717 641
22 3300048909 Ga0496106_0000212 Ga0496106_0000212_18326_20302 641
23 3300053087 Ga0500643_001161 Ga0500643_001161_151_2130 642
24 3300005440 Ga0070705_100000777 Ga0070705_10000077710 643
25 3300005444 Ga0070694_100002060 Ga0070694_10000206010 643
26 3300005445 Ga0070708_100006928 Ga0070708_1000069283 643
27 3300005518 Ga0070699_100003816 Ga0070699_1000038169 643
28 3300005545 Ga0070695_100000769 Ga0070695_1000007699 643
29 3300005546 Ga0070696_100002024 Ga0070696_1000020246 643
30 3300005549 Ga0070704_100003849 Ga0070704_1000038495 643
31 3300005577 Ga0068857_100007200 Ga0068857_1000072005 643
32 3300005843 Ga0068860_100017593 Ga0068860_1000175933 643
33 3300005844 Ga0068862_100002796 Ga0068862_1000027966 643
34 3300009553 Ga0105249_10012383 Ga0105249_100123836 643
35 3300025961 Ga0207712_10005126 Ga0207712_100051266 643
36 3300026067 Ga0207678_10015220 Ga0207678_100152205 643
37 3300026075 Ga0207708_10025666 Ga0207708_100256663 643
38 3300026116 Ga0207674_10018252 Ga0207674_100182526 643
39 3300028380 Ga0268265_10001489 Ga0268265_100014898 643
40 3300028381 Ga0268264_10003542 Ga0268264_100035426 643
41 3300048905 Ga0496102_0005477 Ga0496102_0005477_4314_6311 643
42 3300048906 Ga0496103_0006590 Ga0496103_0006590_1862_3859 643
43 3300048909 Ga0496106_0003056 Ga0496106_0003056_424_2421 643
44 3300048918 Ga0496115_0052091 Ga0496115_0052091_711_2708 643
45 3300037418 Ga0395900_0041578 Ga0395900_0041578_1407_3428 644
46 3300005327 Ga0070658_10000952 Ga0070658_1000095210 645
47 3300025909 Ga0207705_10001036 Ga0207705_100010366 645
48 3300032005 Ga0307411_10011546 Ga0307411_100115463 645
49 3300025304 Ga0209257_1010469 Ga0209257_10104693 647
50 3300003771 Ga0055526_1000650 Ga0055526_100065028 648
51 3300025295 Ga0209564_1001310 Ga0209564_10013103 648
52 3300025913 Ga0207695_10074468 Ga0207695_100744683 648
53 3300025919 Ga0207657_10000020 Ga0207657_100000203 648
54 3300047472 Ga0495686_0000892 Ga0495686_0000892_16467_18494 648
55 3300048927 Ga0496124_0000501 Ga0496124_0000501_55850_57871 649
56 3300053157 Ga0500624_000002 Ga0500624_000002_236120_238144 649
57 3300005327 Ga0070658_10001343 Ga0070658_1000134322 650
58 3300005339 Ga0070660_100003850 Ga0070660_10000385014 650
59 3300025909 Ga0207705_10000071 Ga0207705_1000007152 650
60 3300025919 Ga0207657_10003535 Ga0207657_1000353516 650
61 3300037471 Ga0395905_0064444 Ga0395905_0064444_147_2264 650
62 3300048919 Ga0496116_0000039 Ga0496116_0000039_337977_339995 650
63 3300048921 Ga0496118_0029330 Ga0496118_0029330_654_2672 650
64 3300048925 Ga0496122_0001993 Ga0496122_0001993_26465_28483 650
65 3300048926 Ga0496123_0001459 Ga0496123_0001459_27759_29777 650
66 3300048929 Ga0496126_0000041 Ga0496126_0000041_1922_3940 650
67 3300048929 Ga0496126_0011002 Ga0496126_0011002_1561_3585 650
68 3300005339 Ga0070660_100000005 Ga0070660_100000005154 651
69 3300025919 Ga0207657_10000052 Ga0207657_1000005294 651
70 3300046471 Ga0495650_0002842 Ga0495650_0002842_7575_9590 651
71 3300044684 Ga0466966_0000019 Ga0466966_0000019_86396_88405 652
72 3300005347 Ga0070668_100007089 Ga0070668_1000070897 653
73 3300005841 Ga0068863_100000168 Ga0068863_10000016810 653
74 3300025972 Ga0207668_10069574 Ga0207668_100695742 653
75 3300026088 Ga0207641_10000241 Ga0207641_1000024166 653
76 3300003773 Ga0055537_1001696 Ga0055537_10016963 654
77 3300003773 Ga0055537_1002040 Ga0055537_10020403 654
78 3300003791 Ga0055530_10001582 Ga0055530_1000158215 654
79 3300003792 Ga0055540_1002217 Ga0055540_10022173 654
80 3300003794 Ga0055531_10000297 Ga0055531_1000029716 654
81 3300005842 Ga0068858_100057143 Ga0068858_1000571432 654
82 3300025263 Ga0209565_1000446 Ga0209565_100044633 654
83 3300025273 Ga0209673_1003679 Ga0209673_10036793 654
84 3300025292 Ga0209676_1003359 Ga0209676_10033593 654
85 3300025298 Ga0209050_1000001 Ga0209050_10000011481 654
86 3300025303 Ga0209051_1001006 Ga0209051_10010063 654
87 3300025304 Ga0209257_1000111 Ga0209257_100011133 654
88 3300026035 Ga0207703_10002625 Ga0207703_100026253 654
89 3300053087 Ga0500643_001443 Ga0500643_001443_6309_8330 654
90 3300026116 Ga0207674_10069235 Ga0207674_100692353 655
91 3300046691 Ga0495670_0000008 Ga0495670_0000008_203582_205606 656
92 3300005262 Ga0065165_1000213 Ga0065165_100021373 657
93 3300005338 Ga0068868_100000014 Ga0068868_100000014105 657
94 3300006038 Ga0075365_10000257 Ga0075365_100002577 657
95 3300006042 Ga0075368_10000089 Ga0075368_1000008917 657
96 3300006048 Ga0075363_100000275 Ga0075363_1000002757 657
97 3300006051 Ga0075364_10000007 Ga0075364_1000000721 657
98 3300006177 Ga0075362_10000811 Ga0075362_100008117 657
99 3300006178 Ga0075367_10000162 Ga0075367_100001627 657
100 3300006195 Ga0075366_10000227 Ga0075366_100002276 657
101 3300006353 Ga0075370_10000371 Ga0075370_100003713 657
102 3300006881 Ga0068865_100000006 Ga0068865_10000000689 657
103 3300009148 Ga0105243_10001647 Ga0105243_1000164710 657
104 3300013297 Ga0157378_10000050 Ga0157378_1000005014 657
105 3300014969 Ga0157376_10011135 Ga0157376_100111356 657
106 3300021388 Ga0213875_10021129 Ga0213875_100211291 657
107 3300025935 Ga0207709_10001104 Ga0207709_1000110415 657
108 3300025938 Ga0207704_10000022 Ga0207704_1000002289 657
109 3300025942 Ga0207689_10005004 Ga0207689_1000500410 657
110 3300026023 Ga0207677_10000164 Ga0207677_1000016446 657
111 3300026089 Ga0207648_10006939 Ga0207648_100069394 657
112 3300027866 Ga0209813_10000073 Ga0209813_1000007320 657
113 3300037853 Ga0436364_0453193 Ga0436364_0453193_5596_7632 657
114 3300048925 Ga0496122_0018777 Ga0496122_0018777_2569_4566 657
115 3300050489 nmdc:mga03683_161_c1 nmdc:mga03683_161_c1_7885_9927 657
116 3300050490 nmdc:mga03n38_3_c1 nmdc:mga03n38_3_c1_5379_7421 657
117 3300050491 nmdc:mga00v17_29_c1 nmdc:mga00v17_29_c1_69959_72001 657
118 3300050492 nmdc:mga0yw44_418_c1 nmdc:mga0yw44_418_c1_4410_6452 657
119 3300050493 nmdc:mga0k408_375_c1 nmdc:mga0k408_375_c1_2199_4241 657
120 3300050494 nmdc:mga06z11_892_c1 nmdc:mga06z11_892_c1_5404_7446 657
121 3300050495 nmdc:mga04h51_15_c1 nmdc:mga04h51_15_c1_42663_44705 657
122 3300050496 nmdc:mga07m45_5_c2 nmdc:mga07m45_5_c2_138793_140835 657
123 3300050516 nmdc:mga0sz30_132_c1 nmdc:mga0sz30_132_c1_5484_7526 657
124 iso_pu_bacteria 2818991438 2819553622 657
125 3300053094 Ga0500566_0005110 Ga0500566_0005110_2826_4853 659
126 3300005457 Ga0070662_100031290 Ga0070662_1000312903 660
127 3300005563 Ga0068855_100002891 Ga0068855_10000289119 660
128 3300005614 Ga0068856_100002450 Ga0068856_10000245016 660
129 3300009148 Ga0105243_10088621 Ga0105243_100886212 660
130 3300025904 Ga0207647_10057947 Ga0207647_100579471 660
131 3300025911 Ga0207654_10000577 Ga0207654_100005776 660
132 3300025914 Ga0207671_10002345 Ga0207671_100023452 660
133 3300025933 Ga0207706_10002218 Ga0207706_1000221815 660
134 3300025981 Ga0207640_10001633 Ga0207640_100016332 660
135 3300026078 Ga0207702_10002118 Ga0207702_100021182 660
136 3300028786 Ga0307517_10018189 Ga0307517_100181895 660
137 3300028786 Ga0307517_10023276 Ga0307517_100232763 660
138 3300037312 Ga0395899_0000366 Ga0395899_0000366_26044_28065 660
139 3300037418 Ga0395900_0000756 Ga0395900_0000756_30285_32306 660
140 3300038443 Ga0395901_0000108 Ga0395901_0000108_26038_28059 660
141 3300005355 Ga0070671_100000065 Ga0070671_10000006526 661
142 3300010375 Ga0105239_10071241 Ga0105239_100712412 661
143 3300025931 Ga0207644_10000045 Ga0207644_1000004570 661
144 3300005339 Ga0070660_100104959 Ga0070660_1001049591 662
145 3300009011 Ga0105251_10007296 Ga0105251_100072964 662
146 3300017792 Ga0163161_10002136 Ga0163161_100021368 662
147 3300048928 Ga0496125_0003553 Ga0496125_0003553_12389_14410 662
148 3300005327 Ga0070658_10068752 Ga0070658_100687521 663
149 3300005331 Ga0070670_100092245 Ga0070670_1000922451 663
150 3300005335 Ga0070666_10002159 Ga0070666_100021593 663
151 3300005347 Ga0070668_100022981 Ga0070668_1000229816 663
152 3300005367 Ga0070667_100000921 Ga0070667_10000092121 663
153 3300005841 Ga0068863_100000311 Ga0068863_10000031141 663
154 3300005843 Ga0068860_100003897 Ga0068860_10000389716 663
155 3300025903 Ga0207680_10014106 Ga0207680_100141062 663
156 3300025923 Ga0207681_10005596 Ga0207681_100055963 663
157 3300025925 Ga0207650_10064477 Ga0207650_100644772 663
158 3300025972 Ga0207668_10000560 Ga0207668_1000056021 663
159 3300025986 Ga0207658_10000734 Ga0207658_1000073413 663
160 3300026088 Ga0207641_10000300 Ga0207641_1000030038 663
161 3300028381 Ga0268264_10003502 Ga0268264_100035022 663
162 3300049679 Ga0501249_000057 Ga0501249_000057_14548_16593 663
163 3300013105 Ga0157369_10000213 Ga0157369_1000021329 664
164 3300025919 Ga0207657_10020672 Ga0207657_100206725 664
165 3300053139 Ga0500568_0001781 Ga0500568_0001781_5000_7012 665
166 3300053153 Ga0500616_0000124 Ga0500616_0000124_5944_7956 665
167 3300002067 JGI24735J21928_10002609 JGI24735J21928_100026092 666
168 3300003214 JGI25165J46597_1000010 JGI25165J46597_1000010413 666
169 3300003214 JGI25165J46597_1000085 JGI25165J46597_100008546 666
170 3300005614 Ga0068856_100002829 Ga0068856_10000282922 666
171 3300005616 Ga0068852_100000850 Ga0068852_1000008505 666
172 3300025231 Ga0207427_100382 Ga0207427_10038218 666
173 3300025261 Ga0209233_1000044 Ga0209233_100004468 666
174 3300025261 Ga0209233_1000078 Ga0209233_1000078272 666
175 3300025904 Ga0207647_10006931 Ga0207647_100069311 666
176 3300026078 Ga0207702_10002249 Ga0207702_1000224921 666
177 3300026142 Ga0207698_10000182 Ga0207698_100001827 666
178 3300047443 Ga0495687_000200 Ga0495687_000200_35779_37800 666
179 3300005262 Ga0065165_1002545 Ga0065165_10025455 667
180 3300005327 Ga0070658_10000050 Ga0070658_1000005054 667
181 3300005563 Ga0068855_100000648 Ga0068855_10000064830 667
182 3300005563 Ga0068855_100004178 Ga0068855_1000041782 667
183 3300005563 Ga0068855_100020346 Ga0068855_1000203462 667
184 3300005577 Ga0068857_100041187 Ga0068857_1000411872 667
185 3300005578 Ga0068854_100000071 Ga0068854_10000007144 667
186 3300005614 Ga0068856_100009134 Ga0068856_1000091343 667
187 3300009098 Ga0105245_10007588 Ga0105245_100075883 667
188 3300013102 Ga0157371_10001637 Ga0157371_100016372 667
189 3300013105 Ga0157369_10000339 Ga0157369_1000033947 667
190 3300013297 Ga0157378_10000451 Ga0157378_1000045115 667
191 3300025909 Ga0207705_10000014 Ga0207705_10000014349 667
192 3300025909 Ga0207705_10001280 Ga0207705_1000128016 667
193 3300025927 Ga0207687_10087178 Ga0207687_100871781 667
194 3300025949 Ga0207667_10000007 Ga0207667_10000007482 667
195 3300025949 Ga0207667_10005065 Ga0207667_100050653 667
196 3300025981 Ga0207640_10000086 Ga0207640_1000008642 667
197 3300026078 Ga0207702_10000147 Ga0207702_1000014773 667
198 3300026116 Ga0207674_10052287 Ga0207674_100522873 667
199 3300037471 Ga0395905_0085518 Ga0395905_0085518_207_2228 667
200 3300033180 Ga0307510_10017772 Ga0307510_100177723 668
201 3300049679 Ga0501249_000114 Ga0501249_000114_13088_15130 668
202 3300005336 Ga0070680_100003393 Ga0070680_1000033937 669
203 3300005367 Ga0070667_100000523 Ga0070667_10000052327 669
204 3300005719 Ga0068861_100000124 Ga0068861_10000012426 669
205 3300014326 Ga0157380_10000029 Ga0157380_1000002928 669
206 3300025917 Ga0207660_10008830 Ga0207660_100088305 669
207 3300026118 Ga0207675_100000458 Ga0207675_10000045819 669
208 3300003794 Ga0055531_10022386 Ga0055531_100223862 670
209 3300025304 Ga0209257_1000485 Ga0209257_100048538 670
210 3300003771 Ga0055526_1000273 Ga0055526_100027315 671
211 3300003791 Ga0055530_10000841 Ga0055530_1000084114 671
212 3300003792 Ga0055540_1002290 Ga0055540_10022901 671
213 3300003794 Ga0055531_10000843 Ga0055531_1000084314 671
214 3300005353 Ga0070669_100000192 Ga0070669_10000019233 671
215 3300025292 Ga0209676_1001158 Ga0209676_10011585 671
216 3300025295 Ga0209564_1000069 Ga0209564_1000069225 671
217 3300025298 Ga0209050_1000005 Ga0209050_10000051106 671
218 3300025303 Ga0209051_1000269 Ga0209051_100026950 671
219 3300025304 Ga0209257_1001263 Ga0209257_10012635 671
220 3300025923 Ga0207681_10000037 Ga0207681_10000037135 671
221 3300038443 Ga0395901_0091480 Ga0395901_0091480_206_2254 671
222 iso_pu_bacteria 2643221541 2643731443 671
223 iso_pu_bacteria 2643221606 2644042229 671
224 iso_pu_bacteria 2643221671 2644394129 671
225 3300047472 Ga0495686_0000985 Ga0495686_0000985_25561_27591 672
226 3300049523 Ga0501300_000996 Ga0501300_000996_1817_3844 672
227 3300049662 Ga0501222_001090 Ga0501222_001090_576_2603 672
228 3300049690 Ga0501261_000040 Ga0501261_000040_4017_6044 672
229 3300049708 Ga0501245_000040 Ga0501245_000040_5178_7205 672
230 3300049823 Ga0501044_0016423 Ga0501044_0016423_5161_7188 672
231 3300003791 Ga0055530_10000249 Ga0055530_1000024931 673
232 3300003794 Ga0055531_10000008 Ga0055531_10000008153 673
233 3300005344 Ga0070661_100000018 Ga0070661_100000018111 673
234 3300009177 Ga0105248_10006066 Ga0105248_100060665 673
235 3300009551 Ga0105238_10010581 Ga0105238_100105812 673
236 3300013105 Ga0157369_10000632 Ga0157369_1000063233 673
237 3300025298 Ga0209050_1000026 Ga0209050_100002630 673
238 3300025304 Ga0209257_1000009 Ga0209257_100000930 673
239 3300025920 Ga0207649_10000034 Ga0207649_10000034111 673
240 3300025924 Ga0207694_10009789 Ga0207694_100097896 673
241 3300033180 Ga0307510_10025005 Ga0307510_100250052 673
242 3300053087 Ga0500643_003872 Ga0500643_003872_4339_6360 673
243 3300013102 Ga0157371_10046298 Ga0157371_100462982 674
244 3300026041 Ga0207639_10016667 Ga0207639_100166676 674
245 3300037312 Ga0395899_0000495 Ga0395899_0000495_26531_28555 674
246 3300044693 Ga0466961_0002709 Ga0466961_0002709_8326_10380 674
247 iso_pu_bacteria 2599185354 2600204233 674
248 iso_pu_bacteria 2751185897 2753767688 674
249 iso_pu_bacteria 2919138771 2919142555 674
250 3300002459 JGI24751J29686_10000185 JGI24751J29686_1000018520 675
251 3300005327 Ga0070658_10015553 Ga0070658_100155533 675
252 3300005331 Ga0070670_100000008 Ga0070670_100000008202 675
253 3300005530 Ga0070679_100029869 Ga0070679_1000298695 675
254 3300005618 Ga0068864_100000027 Ga0068864_100000027182 675
255 3300005719 Ga0068861_100000017 Ga0068861_10000001748 675
256 3300009093 Ga0105240_10007247 Ga0105240_1000724715 675
257 3300013105 Ga0157369_10000220 Ga0157369_1000022071 675
258 3300025909 Ga0207705_10024230 Ga0207705_100242305 675
259 3300025913 Ga0207695_10024650 Ga0207695_100246501 675
260 3300025921 Ga0207652_10004820 Ga0207652_100048202 675
261 3300025925 Ga0207650_10000019 Ga0207650_10000019128 675
262 3300025925 Ga0207650_10000020 Ga0207650_10000020121 675
263 3300025972 Ga0207668_10017558 Ga0207668_100175583 675
264 3300026095 Ga0207676_10000022 Ga0207676_1000002273 675
265 3300026118 Ga0207675_100008477 Ga0207675_1000084778 675
266 3300037418 Ga0395900_0002438 Ga0395900_0002438_5672_7699 675
267 3300037418 Ga0395900_0008506 Ga0395900_0008506_4168_6195 675
268 3300037466 Ga0395898_0008957 Ga0395898_0008957_2705_4732 675
269 3300037471 Ga0395905_0000231 Ga0395905_0000231_5459_7486 675
270 3300038443 Ga0395901_0001371 Ga0395901_0001371_16039_18066 675
271 3300048905 Ga0496102_0110798 Ga0496102_0110798_405_2432 675
272 3300005457 Ga0070662_100006638 Ga0070662_1000066385 676
273 3300005578 Ga0068854_100000429 Ga0068854_10000042915 676
274 3300005614 Ga0068856_100028708 Ga0068856_1000287082 676
275 3300005719 Ga0068861_100000201 Ga0068861_1000002019 676
276 3300009093 Ga0105240_10002001 Ga0105240_1000200130 676
277 3300009545 Ga0105237_10006206 Ga0105237_100062066 676
278 3300009551 Ga0105238_10037189 Ga0105238_100371891 676
279 3300010375 Ga0105239_10001072 Ga0105239_100010727 676
280 3300010375 Ga0105239_10039073 Ga0105239_100390731 676
281 3300013104 Ga0157370_10000266 Ga0157370_1000026618 676
282 3300013104 Ga0157370_10000782 Ga0157370_1000078218 676
283 3300013307 Ga0157372_10005352 Ga0157372_100053528 676
284 3300025913 Ga0207695_10001678 Ga0207695_1000167813 676
285 3300025913 Ga0207695_10025366 Ga0207695_100253666 676
286 3300025914 Ga0207671_10003299 Ga0207671_1000329912 676
287 3300025924 Ga0207694_10012867 Ga0207694_100128676 676
288 3300025933 Ga0207706_10014010 Ga0207706_100140106 676
289 3300025981 Ga0207640_10000073 Ga0207640_1000007319 676
290 3300026078 Ga0207702_10020478 Ga0207702_100204783 676
291 3300026116 Ga0207674_10007929 Ga0207674_100079298 676
292 3300026118 Ga0207675_100000018 Ga0207675_10000001883 676
293 3300048924 Ga0496121_0059825 Ga0496121_0059825_481_2517 676
294 3300053116 Ga0500592_000002 Ga0500592_000002_70919_72955 676
295 3300053158 Ga0500627_0000026 Ga0500627_0000026_68682_70718 676
296 3300053729 Ga0500625_000016 Ga0500625_000016_21565_23601 676
297 iso_pu_bacteria 2643221605 2644039334 676
298 3300014968 Ga0157379_10000493 Ga0157379_1000049318 677
299 3300049668 Ga0501233_000008 Ga0501233_000008_13628_15667 677
300 3300049705 Ga0501225_0000103 Ga0501225_0000103_19318_21357 677
301 3300049707 Ga0501234_002611 Ga0501234_002611_656_2695 677
302 3300049853 Ga0501226_000021 Ga0501226_000021_105776_107815 677
303 3300003215 JGI25153J46596_10000007 JGI25153J46596_10000007265 678
304 3300005563 Ga0068855_100002703 Ga0068855_10000270315 678
305 3300005614 Ga0068856_100003561 Ga0068856_1000035618 678
306 3300009093 Ga0105240_10005353 Ga0105240_100053536 678
307 3300009545 Ga0105237_10016163 Ga0105237_100161632 678
308 3300010375 Ga0105239_10014711 Ga0105239_100147113 678
309 3300013102 Ga0157371_10000011 Ga0157371_10000011206 678
310 3300025297 Ga0209758_1000017 Ga0209758_1000017261 678
311 3300025913 Ga0207695_10015586 Ga0207695_100155861 678
312 3300025914 Ga0207671_10015088 Ga0207671_100150882 678
313 3300025949 Ga0207667_10001647 Ga0207667_1000164715 678
314 3300025949 Ga0207667_10032622 Ga0207667_100326223 678
315 3300026078 Ga0207702_10000470 Ga0207702_100004709 678
316 3300048908 Ga0496105_0010365 Ga0496105_0010365_3263_5299 678
317 3300048922 Ga0496119_0005780 Ga0496119_0005780_5862_7898 678
318 3300048923 Ga0496120_0011076 Ga0496120_0011076_2091_4127 678
319 3300048927 Ga0496124_0000011 Ga0496124_0000011_442292_444328 678
320 3300048929 Ga0496126_0013951 Ga0496126_0013951_1809_3845 678
321 3300053163 Ga0500639_014485 Ga0500639_014485_454_2505 678
322 3300005563 Ga0068855_100002262 Ga0068855_10000226214 679
323 3300025949 Ga0207667_10025575 Ga0207667_100255754 679
324 3300001990 JGI24737J22298_10000278 JGI24737J22298_1000027817 680
325 3300002067 JGI24735J21928_10000237 JGI24735J21928_1000023715 680
326 3300002075 JGI24738J21930_10000016 JGI24738J21930_100000163 680
327 3300005577 Ga0068857_100039662 Ga0068857_1000396623 680
328 3300005616 Ga0068852_100001043 Ga0068852_10000104312 680
329 3300005834 Ga0068851_10000145 Ga0068851_1000014536 680
330 3300009551 Ga0105238_10017365 Ga0105238_100173653 680
331 3300010375 Ga0105239_10128910 Ga0105239_101289103 680
332 3300013102 Ga0157371_10006127 Ga0157371_100061272 680
333 3300013307 Ga0157372_10001385 Ga0157372_100013857 680
334 3300025321 Ga0207656_10000058 Ga0207656_1000005814 680
335 3300025904 Ga0207647_10001963 Ga0207647_1000196310 680
336 3300025924 Ga0207694_10008249 Ga0207694_100082496 680
337 3300025981 Ga0207640_10003833 Ga0207640_100038338 680
338 3300026116 Ga0207674_10010260 Ga0207674_100102602 680
339 3300031548 Ga0307408_100001589 Ga0307408_1000015892 680

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12696

TraG-D_C

TraM recognition site of TraD and TraG

406

528

0.89

PF02534

T4SS-DNA_transf

Type IV secretory system Conjugative DNA transfer

102

564

0.88

PF10412

TrwB_AAD_bind

Type IV secretion-system coupling protein DNA-binding domain

168

547

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
8dol-assembly1.cif.gz_D mechanism of regulation of the helicobacter pylori cagbeta atpase by cagz 0.5771 107 563
8dol-assembly1.cif.gz_B mechanism of regulation of the helicobacter pylori cagbeta atpase by cagz 0.5592 107 563
8dol-assembly1.cif.gz_A mechanism of regulation of the helicobacter pylori cagbeta atpase by cagz 0.556 107 604
1e9s-assembly1.cif.gz_B bacterial conjugative coupling protein trwbdeltan70. unbound monoclinic form. 0.5469 196 551
8dol-assembly1.cif.gz_F mechanism of regulation of the helicobacter pylori cagbeta atpase by cagz 0.5457 107 604
ID Description Score Start End Superfamily
3fg9F01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.4492 353 416 3.40.50.620
af_Q84TD5_107_348_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.4037 348 442 3.40.50.150
af_Q3LXA7_193_351_1.10.472.140 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1; 0.389 225 337 1.10.472.140
4l9xB02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Metal-dependent hydrolases 0.3834 333 467 3.20.20.140
af_Q8S1T0_650_843_3.40.50.80 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.349 364 486 3.40.50.80
ID Description Score Start End GO Terms
AF-A0A7R7CR61-F1-model_v4 Conjugal transfer protein TraG 0.9977 4 88 GO:0016020
AF-A0A529HNT6-F1-model_v4 Conjugal transfer protein TraG 0.9874 201 337 GO:0005886
AF-A0A529LP51-F1-model_v4 Conjugal transfer protein TraG 0.986 208 367 GO:0005886
AF-A0A529HNT6-F1-model_v4 Conjugal transfer protein TraG 0.9803 201 337 GO:0005886
AF-A0A529LP51-F1-model_v4 Conjugal transfer protein TraG 0.98 208 367 GO:0005886

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pLDDT pTM Quality
67.16 0.61 Medium
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Predicted Structure (AlphaFold2)

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