F413779

General Info

Members Datasets Scaffolds Average Seq Length
339 229 679 160

Family's Representative Sequence

Representative Sequence 3300003761|Ga0055535_1003032|Ga0055535_10030324
Length 179
Sequence MKKHHSLFFLNIRSQLRTFYYICIMNVINESGILAISTRLQRLADQIRKDGLLIYKANGIDFEPKWFPVIYTLHQKSILSVVEIAAEIGYSHPSTISLLKELEKKKLIRSKKDKSDERKRLLTLTEKGTELVTQMQPVWSVMTEALASFTTNLIKAIDEVEEKMEQQSFYQRAQSIKNK

Samples

Sample ID Description Type Environment
1 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
8 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
9 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
10 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
13 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
16 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
17 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
18 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
19 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
24 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
25 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
39 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
54 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
55 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
62 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
64 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
65 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
85 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
86 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
90 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
91 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
92 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
105 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
106 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
107 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
108 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
109 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
114 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
117 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
122 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
123 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
128 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
129 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
130 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
135 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
136 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
139 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
142 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
143 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
144 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
151 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
154 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
155 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
156 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
157 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
158 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
159 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
160 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
161 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
167 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
168 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
169 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
170 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
171 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
172 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
173 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
174 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
175 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
176 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
177 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
178 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
179 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
180 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
181 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
182 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
183 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
184 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
185 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
186 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
187 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
188 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
189 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
190 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
191 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
192 2738541283 Pedobacter sp. OK701 Isolate Unclassified
193 2738541284 Pedobacter sp. YR016 Isolate Unclassified
194 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
195 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
196 2738543023 Pedobacter sp. OK628 Isolate Unclassified
197 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
198 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
199 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
200 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
201 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
202 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
203 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
204 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
205 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
206 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
207 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
208 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
209 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
210 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
211 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
212 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
213 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
214 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
215 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
216 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
217 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
218 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
219 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
220 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
221 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
222 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
223 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
224 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
225 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
226 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
227 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
228 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
229 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.37
Metatranscriptomes 0.59
Isolates 15.04

Biome Distribution

Category Percentage (%)
Aerial Root 0.59
Bulb 0
Endosphere 16.22
Nodule 1.47
Rhizoplane 1.18
Rhizosphere 62.83
Stem 0
Stem Tuber 0
Unclassified 3.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055535_1003032 3300003761 Bacteria 5119
2 SwRhRL2b_contig_139347 2162886007 Bacteria 1641
3 SwRhRL2b_contig_3893312 2162886007 Bacteria 22472
4 JGI24740J21852_10000518 3300001979 Bacteria 16597
5 JGI24739J22299_10011148 3300001989 Bacteria 3322
6 JGI24739J22299_10069344 3300001989 Bacteria 1099
7 JGI24737J22298_10000116 3300001990 Bacteria 24197
8 JGI24735J21928_10000015 3300002067 Bacteria 167231
9 JGI24735J21928_10073617 3300002067 Unclassified 978
10 JGI25162J39368_1000016 3300002737 Bacteria 288734
11 JGI25162J39368_1000866 3300002737 Bacteria 19829
12 JGI25158J39367_1024444 3300002739 Unclassified 716
13 JGI25152J39213_1000192 3300002773 Bacteria 41121
14 JGI25150J39212_1000002 3300002774 Bacteria 537631
15 JGI25151J46595_10000003 3300003187 Bacteria 715330
16 JGI25165J46597_1001674 3300003214 Bacteria 10067
17 JGI25153J46596_10000003 3300003215 Bacteria 553253
18 rootH1_10034433 3300003316 Bacteria 16075
19 rootH1_10057824 3300003316 Bacteria 5550
20 rootH1_10125141 3300003316 Bacteria 3792
21 rootH2_10024266 3300003320 Bacteria 19203
22 rootH2_10062344 3300003320 Bacteria 1514
23 rootH2_10122095 3300003320 Bacteria 2724
24 rootL2_10009821 3300003322 Bacteria 8071
25 rootL2_10013284 3300003322 Bacteria 4488
26 rootL2_10179523 3300003322 Bacteria 5475
27 rootL2_10200158 3300003322 Unclassified 3295
28 rootH1_10003399 3300003323 Bacteria 54122
29 rootH1_10045308 3300003316 Bacteria 1669
30 rootH1_10045308 3300003323 Bacteria 7684
31 rootH1_10052179 3300003323 Bacteria 38243
32 rootH1_10082313 3300003323 Bacteria 1228
33 rootH1_10108944 3300003323 Bacteria 4222
34 rootH1_10288310 3300003323 Bacteria 1853
35 JGI25160J50197_1022276 3300003354 Bacteria 1861
36 Ga0055542_1003387 3300003762 Bacteria 4348
37 Ga0055531_10000198 3300003794 Bacteria 66737
38 Ga0065714_10001936 3300005288 Bacteria 75145
39 Ga0065714_10002328 3300005288 Bacteria 46814
40 Ga0065714_10065441 3300005288 Bacteria 10062
41 Ga0065714_10079493 3300005288 Bacteria 2510
42 Ga0065714_10085797 3300005288 Bacteria 2132
43 Ga0065714_10107469 3300005288 Bacteria 1531
44 Ga0065714_10184234 3300005288 Bacteria 947
45 Ga0065704_10000199 3300005289 Bacteria 297176
46 Ga0070658_10281859 3300005327 Bacteria 1415
47 Ga0070666_10064458 3300005335 Unclassified 2485
48 Ga0070682_100054480 3300005337 Bacteria 2510
49 Ga0070669_100500923 3300005353 Unclassified 1007
50 Ga0070659_100005000 3300005366 Bacteria 9499
51 Ga0070667_101127531 3300005367 Bacteria 733
52 Ga0070662_101427940 3300005457 Bacteria 596
53 Ga0068867_100512112 3300005459 Bacteria 1033
54 Ga0070693_100480924 3300005547 Bacteria 877
55 Ga0068855_100204667 3300005563 Bacteria 2221
56 Ga0068857_100022072 3300005577 Bacteria 5600
57 Ga0068860_100000046 3300005843 Bacteria 214800
58 Ga0075366_10000261 3300006195 Bacteria 23266
59 Ga0097621_100414282 3300006237 Unclassified 1208
60 Ga0075370_10259569 3300006353 Bacteria 1030
61 Ga0079104_1000005 3300006946 Bacteria 407099
62 Ga0099826_10064639 3300006948 Bacteria 2357
63 Ga0105240_10000520 3300009093 Bacteria 70859
64 Ga0105240_10270730 3300009093 Bacteria 1956
65 Ga0105241_10104237 3300009174 Unclassified 2259
66 Ga0105237_10002729 3300009545 Bacteria 21530
67 Ga0105237_10003434 3300009545 Bacteria 18811
68 Ga0105237_10007806 3300009545 Bacteria 11664
69 Ga0105237_10010168 3300009545 Bacteria 10026
70 Ga0105238_10002208 3300009551 Bacteria 19629
71 Ga0105249_10278681 3300009553 Bacteria 1669
72 Ga0105239_10000001 3300010375 Bacteria 617353
73 Ga0105239_10008608 3300010375 Bacteria 11568
74 Ga0105239_10028319 3300010375 Bacteria 6163
75 Ga0105239_10146558 3300010375 Bacteria 2633
76 Ga0105239_10620971 3300010375 Bacteria 1233
77 Ga0105239_10686038 3300010375 Bacteria 1171
78 Ga0157373_10000015 3300013100 Bacteria 183381
79 Ga0157373_10000036 3300013100 Bacteria 122723
80 Ga0157373_10003820 3300013100 Bacteria 11390
81 Ga0157373_10247659 3300013100 Bacteria 1260
82 Ga0157371_10000542 3300013102 Bacteria 44953
83 Ga0157371_10002946 3300013102 Bacteria 15852
84 Ga0157371_10009816 3300013102 Bacteria 7505
85 Ga0157371_10040503 3300013102 Bacteria 3327
86 Ga0157371_10659111 3300013102 Bacteria 781
87 Ga0157370_10000399 3300013104 Bacteria 54642
88 Ga0157370_10000465 3300013104 Bacteria 50538
89 Ga0157370_10003500 3300013104 Bacteria 18407
90 Ga0157370_10049503 3300013104 Bacteria 4021
91 Ga0157370_10055865 3300013104 Bacteria 3759
92 Ga0157370_10199497 3300013104 Bacteria 1856
93 Ga0157370_10350144 3300013104 Bacteria 1361
94 Ga0157370_10386787 3300013104 Bacteria 1288
95 Ga0157370_10437737 3300013104 Bacteria 1202
96 Ga0157370_10488146 3300013104 Bacteria 1132
97 Ga0157370_10883832 3300013104 Bacteria 811
98 Ga0157369_10010263 3300013105 Bacteria 10686
99 Ga0157369_10044949 3300013105 Bacteria 4805
100 Ga0157369_10221609 3300013105 Bacteria 1980
101 Ga0157369_11138799 3300013105 Bacteria 797
102 Ga0163162_10002529 3300013306 Bacteria 17304
103 Ga0163162_10006487 3300013306 Bacteria 11327
104 Ga0163162_10687641 3300013306 Bacteria 1145
105 Ga0163162_11332841 3300013306 Bacteria 816
106 Ga0157372_10000173 3300013307 Bacteria 71416
107 Ga0157372_10001390 3300013307 Bacteria 26087
108 Ga0157372_10086703 3300013307 Bacteria 3552
109 Ga0157375_12060616 3300013308 Bacteria 679
110 Ga0182008_10000001 3300014497 Bacteria 540790
111 Ga0182008_10047533 3300014497 Unclassified 2132
112 Ga0182006_1000011 3300015261 Bacteria 408647
113 Ga0182006_1000999 3300015261 Bacteria 18510
114 Ga0182006_1001271 3300015261 Bacteria 15565
115 Ga0182005_1000202 3300015265 Bacteria 40206
116 Ga0163161_10000527 3300017792 Bacteria 31224
117 Ga0163161_10001157 3300017792 Bacteria 19859
118 Ga0163161_10050013 3300017792 Bacteria 3023
119 Ga0209436_100770 3300025208 Bacteria 13274
120 Ga0207427_100122 3300025231 Bacteria 99064
121 Ga0207427_106393 3300025231 Bacteria 1498
122 Ga0209437_100048 3300025233 Bacteria 405107
123 Ga0209437_100119 3300025233 Bacteria 206549
124 Ga0209258_100697 3300025242 Bacteria 22959
125 Ga0207425_1000004 3300025245 Bacteria 1092421
126 Ga0209148_1001122 3300025254 Bacteria 15827
127 Ga0209129_1000005 3300025258 Bacteria 777812
128 Ga0209129_1010646 3300025258 Bacteria 2275
129 Ga0209233_1000029 3300025261 Bacteria 641642
130 Ga0209233_1001847 3300025261 Bacteria 8130
131 Ga0209130_1002699 3300025284 Bacteria 8453
132 Ga0209025_1000009 3300025294 Bacteria 1092561
133 Ga0209758_1000010 3300025297 Bacteria 1092782
134 Ga0209758_1102540 3300025297 Bacteria 810
135 Ga0207426_1000135 3300025302 Bacteria 202216
136 Ga0209257_1000008 3300025304 Bacteria 1294570
137 Ga0207655_1000381 3300025728 Bacteria 61849
138 Ga0207680_10293161 3300025903 Unclassified 1133
139 Ga0207647_10002110 3300025904 Bacteria 15216
140 Ga0207647_10103501 3300025904 Bacteria 1688
141 Ga0207654_10001582 3300025911 Bacteria 11960
142 Ga0207695_10001716 3300025913 Bacteria 35061
143 Ga0207695_10405189 3300025913 Bacteria 1248
144 Ga0207671_10000609 3300025914 Bacteria 47411
145 Ga0207671_10001993 3300025914 Bacteria 22502
146 Ga0207671_10006059 3300025914 Bacteria 10901
147 Ga0207671_10012842 3300025914 Bacteria 6709
148 Ga0207671_10425700 3300025914 Bacteria 1056
149 Ga0207681_10487638 3300025923 Unclassified 1007
150 Ga0207694_10052950 3300025924 Bacteria 3146
151 Ga0207690_10067555 3300025932 Bacteria 2452
152 Ga0207661_10025980 3300025944 Bacteria 4457
153 Ga0207640_10009382 3300025981 Bacteria 5478
154 Ga0207658_11197913 3300025986 Bacteria 694
155 Ga0207639_10037458 3300026041 Bacteria 3602
156 Ga0207674_10031003 3300026116 Bacteria 5619
157 Ga0207674_10033219 3300026116 Bacteria 5402
158 Ga0209281_1000566 3300027111 Bacteria 44512
159 Ga0209489_117438 3300027361 Bacteria 3264
160 Ga0209282_1052071 3300027666 Bacteria 2341
161 Ga0268266_10000049 3300028379 Bacteria 307763
162 Ga0268264_10000041 3300028381 Bacteria 372501
163 Ga0307517_10099856 3300028786 Bacteria 2297
164 Ga0307515_10001710 3300028794 Bacteria 48899
165 Ga0307515_10001900 3300028794 Bacteria 46488
166 Ga0316179_1002546 3300030734 Bacteria 829
167 Ga0316181_1198747 3300030744 Bacteria 626
168 Ga0307408_100007904 3300031548 Bacteria 7033
169 Ga0307508_10448904 3300031616 Bacteria 882
170 Ga0307405_10574154 3300031731 Bacteria 916
171 Ga0307413_10000257 3300031824 Bacteria 16055
172 Ga0307410_10000089 3300031852 Bacteria 30766
173 Ga0307406_10000037 3300031901 Bacteria 80899
174 Ga0307407_10005460 3300031903 Bacteria 5519
175 Ga0307412_10000012 3300031911 Bacteria 404180
176 Ga0307412_10000017 3300031911 Bacteria 294698
177 Ga0307416_100000010 3300032002 Bacteria 320243
178 Ga0307414_10000012 3300032004 Bacteria 322675
179 Ga0307414_10007370 3300032004 Bacteria 6180
180 Ga0307414_10055715 3300032004 Bacteria 2769
181 Ga0307414_10162098 3300032004 Bacteria 1777
182 Ga0307414_10664366 3300032004 Bacteria 940
183 Ga0307414_10676361 3300032004 Bacteria 932
184 Ga0307414_10856174 3300032004 Bacteria 831
185 Ga0307411_10000001 3300032005 Bacteria 931810
186 Ga0307507_10000309 3300033179 Bacteria 98028
187 Ga0307510_10000671 3300033180 Bacteria 34905
188 Ga0439447_002887 3300041407 Bacteria 6157
189 Ga0439466_0002630 3300041411 Bacteria 7029
190 Ga0451787_835760 3300041441 Bacteria 536
191 Ga0451798_0731987 3300041458 Bacteria 623
192 Ga0466972_0004670 3300044658 Bacteria 6858
193 Ga0466972_0115814 3300044658 Unclassified 1265
194 Ga0466968_0035357 3300044735 Bacteria 2090
195 Ga0466970_0001499 3300044765 Bacteria 11236
196 Ga0495627_002302 3300046453 Bacteria 9415
197 Ga0495629_0403714 3300046459 Bacteria 929
198 Ga0495638_0114009 3300046460 Bacteria 1603
199 Ga0495651_0410643 3300046462 Bacteria 882
200 Ga0495650_0000144 3300046471 Bacteria 165957
201 Ga0495585_0000091 3300046492 Bacteria 95620
202 Ga0495585_0000241 3300046492 Bacteria 56727
203 Ga0495583_0024629 3300046506 Bacteria 3020
204 Ga0495583_0254621 3300046506 Bacteria 703
205 Ga0495606_0000430 3300046507 Bacteria 69872
206 Ga0495606_0009540 3300046507 Bacteria 8195
207 Ga0495606_0021269 3300046507 Bacteria 4755
208 Ga0495606_0047312 3300046507 Bacteria 2836
209 Ga0495610_0000001 3300046512 Bacteria 1620061
210 Ga0495610_0008174 3300046512 Bacteria 6824
211 Ga0495632_0125280 3300046519 Bacteria 1198
212 Ga0495637_0139650 3300046520 Bacteria 920
213 Ga0495643_0031853 3300046522 Bacteria 2931
214 Ga0495648_0004406 3300046524 Bacteria 12040
215 Ga0495648_0005249 3300046524 Bacteria 10824
216 Ga0495663_0000151 3300046525 Bacteria 28138
217 Ga0495663_0011172 3300046525 Bacteria 2499
218 Ga0495652_0457723 3300046529 Bacteria 892
219 Ga0495609_0048637 3300046538 Bacteria 1895
220 Ga0495609_0084056 3300046538 Bacteria 1389
221 Ga0495622_0043496 3300046557 Bacteria 2088
222 Ga0495633_0007299 3300046558 Bacteria 6381
223 Ga0495668_0000054 3300046616 Bacteria 203960
224 Ga0495625_0000059 3300046660 Bacteria 180330
225 Ga0495625_0000355 3300046660 Bacteria 69806
226 Ga0495625_0000548 3300046660 Bacteria 55064
227 Ga0495625_0061683 3300046660 Bacteria 2653
228 Ga0495661_0057199 3300046665 Bacteria 2329
229 Ga0495661_0174991 3300046665 Bacteria 1141
230 Ga0495658_0020053 3300046683 Bacteria 3501
231 Ga0495649_0000031 3300046694 Bacteria 151547
232 Ga0495660_0017429 3300046810 Bacteria 4136
233 Ga0495660_0113604 3300046810 Bacteria 1379
234 Ga0495683_0071605 3300047323 Bacteria 1701
235 Ga0495687_000001 3300047443 Bacteria 1215582
236 Ga0495687_037873 3300047443 Bacteria 2144
237 Ga0495677_0162289 3300047445 Bacteria 863
238 Ga0495686_0000118 3300047472 Bacteria 165897
239 Ga0495686_0056393 3300047472 Bacteria 2455
240 Ga0495614_0004728 3300048089 Bacteria 6140
241 Ga0496115_0026826 3300048918 Bacteria 4501
242 Ga0496116_0000030 3300048919 Bacteria 420761
243 Ga0496118_0120961 3300048921 Bacteria 1707
244 Ga0496122_0000390 3300048925 Bacteria 93522
245 Ga0496122_0025913 3300048925 Bacteria 5076
246 Ga0496123_0003629 3300048926 Bacteria 17087
247 Ga0496123_0094388 3300048926 Bacteria 1763
248 Ga0496124_0015286 3300048927 Bacteria 7366
249 Ga0496124_0560294 3300048927 Bacteria 752
250 Ga0496125_0000035 3300048928 Bacteria 339737
251 Ga0496125_0034519 3300048928 Bacteria 4457
252 Ga0496126_0012027 3300048929 Bacteria 8893
253 Ga0496126_0457101 3300048929 Bacteria 1027
254 Ga0495682_0011476 3300049460 Bacteria 3409
255 Ga0501314_000692 3300049530 Bacteria 2186
256 Ga0501323_006127 3300049539 Bacteria 1337
257 Ga0501238_000032 3300049671 Bacteria 24802
258 Ga0501249_001131 3300049679 Bacteria 5631
259 Ga0501249_020753 3300049679 Bacteria 1430
260 Ga0501241_001523 3300049758 Bacteria 4683
261 Ga0501241_005604 3300049758 Unclassified 2337
262 Ga0501241_121024 3300049758 Bacteria 581
263 Ga0501266_000005 3300049763 Bacteria 346750
264 Ga0501269_012718 3300049766 Bacteria 1029
265 Ga0501280_000125 3300049776 Bacteria 19989
266 Ga0501284_00168 3300050005 Bacteria 6114
267 nmdc:mga0k408_245_c1 3300050493 Bacteria 29347
268 nmdc:mga07m45_206109_c1 3300050496 Bacteria 1144
269 Ga0500644_0000589 3300053088 Bacteria 13889
270 Ga0500646_0002442 3300053090 Bacteria 4830
271 Ga0500583_0039432 3300053092 Bacteria 2133
272 Ga0500651_0137295 3300053093 Bacteria 1476
273 Ga0500641_0000004 3300053096 Bacteria 263911
274 Ga0500607_160953 3300053121 Bacteria 1026
275 Ga0500614_010285 3300053123 Bacteria 2007
276 Ga0500618_000018 3300053125 Bacteria 163272
277 Ga0500618_020719 3300053125 Bacteria 1609
278 Ga0500655_012157 3300053133 Bacteria 1563
279 Ga0500658_0000024 3300053134 Bacteria 117952
280 Ga0500658_0013904 3300053134 Bacteria 2976
281 Ga0500559_0008658 3300053136 Bacteria 4447
282 Ga0500559_0024048 3300053136 Bacteria 2589
283 Ga0500568_0051903 3300053139 Bacteria 1612
284 Ga0500577_0001002 3300053142 Bacteria 7277
285 Ga0500577_0342916 3300053142 Unclassified 653
286 Ga0500590_238521 3300053148 Bacteria 734
287 Ga0500616_0151095 3300053153 Bacteria 1075
288 Ga0500633_0031077 3300053160 Bacteria 1723
289 Ga0500637_0367754 3300053178 Bacteria 759
290 2513234805 2513020052 Bacteria 5120511
291 2520878955 2519899754 Bacteria 5336938
292 2585158520 2582581281 Bacteria 4487904
293 2585162842 2582581282 Bacteria 4495830
294 2587747900 2585428060 Bacteria 5304711
295 2587866766 2585428095 Bacteria 3789702
296 2588446409 2588253712 Bacteria 5403181
297 2590611556 2588254257 Bacteria 5436094
298 2599481990 2599185184 Bacteria 6430550
299 2644642889 2643221716 Bacteria 4986332
300 2644685132 2643221725 Bacteria 5087956
301 2729203138 2728369107 Bacteria 5082720
302 2738736531 2738541279 Bacteria 6149495
303 2738754374 2738541283 Bacteria 7222293
304 2738763946 2738541284 Bacteria 5199923
305 2738766830 2738541285 Bacteria 6150075
306 2739218113 2738543007 Bacteria 6149845
307 2739300983 2738543023 Bacteria 6767879
308 2740000958 2739367857 Bacteria 5433684
309 2740005774 2739367858 Bacteria 5432813
310 2740057586 2739367874 Bacteria 4872888
311 2776613587 2775506987 Bacteria 5373360
312 2802654045 2802428842 Bacteria 4926114
313 2817415932 2816332280 Bacteria 5109718
314 2819577471 2818991442 Bacteria 8318214
315 2819678448 2818991460 Bacteria 7595395
316 2842084164 2842083920 Bacteria 4857652
317 2842908095 2842903701 Bacteria 6986368
318 2857615954 2857613821 Bacteria 4917088
319 2857622985 2857618242 Bacteria 5635925
320 2896089821 2896085136 Bacteria 6129793
321 2903896281 2903895155 Bacteria 5258610
322 2904422147 2904419702 Bacteria 5166287
323 2906000834 2905999023 Bacteria 4591259
324 2919186872 2919186247 Bacteria 6244071
325 2919440528 2919437846 Bacteria 6199444
326 2928082098 2928078545 Bacteria 6534839
327 2928149324 2928147474 Bacteria 6512076
328 2929180798 2929177148 Bacteria 7883697
329 2929244490 2929239360 Bacteria 7745570
330 2932087940 2932082852 Bacteria 6563563
331 2939665859 2939664404 Bacteria 6364494
332 2945983195 2945977869 Bacteria 7777518
333 2946017414 2946013367 Bacteria 7766675
334 2946021370 2946019816 Bacteria 4621265
335 2958460763 2958458903 Bacteria 5301041
336 2977269844 2977268062 Bacteria 5243061
337 2984575955 2984572630 Bacteria 4186940
338 2984609410 2984606641 Bacteria 4186971
339 8054308170 8054307821 Bacteria 5212224
340 8055593919 8055592153 Bacteria 5961247
341 Ga0055535_1003032
342 SwRhRL2b_contig_139347
343 SwRhRL2b_contig_3893312
344 JGI24740J21852_10000518
345 JGI24739J22299_10011148
346 JGI24739J22299_10069344
347 JGI24737J22298_10000116
348 JGI24735J21928_10000015
349 JGI24735J21928_10073617
350 JGI25162J39368_1000016
351 JGI25162J39368_1000866
352 JGI25158J39367_1024444
353 JGI25152J39213_1000192
354 JGI25150J39212_1000002
355 JGI25151J46595_10000003
356 JGI25165J46597_1001674
357 JGI25153J46596_10000003
358 rootH1_10034433
359 rootH1_10057824
360 rootH1_10125141
361 rootH2_10024266
362 rootH2_10062344
363 rootH2_10122095
364 rootL2_10009821
365 rootL2_10013284
366 rootL2_10179523
367 rootL2_10200158
368 rootH1_10003399
369 rootH1_10045308
370 rootH1_10052179
371 rootH1_10082313
372 rootH1_10108944
373 rootH1_10288310
374 JGI25160J50197_1022276
375 Ga0055542_1003387
376 Ga0055531_10000198
377 Ga0065714_10001936
378 Ga0065714_10002328
379 Ga0065714_10065441
380 Ga0065714_10079493
381 Ga0065714_10085797
382 Ga0065714_10107469
383 Ga0065714_10184234
384 Ga0065704_10000199
385 Ga0070658_10281859
386 Ga0070666_10064458
387 Ga0070682_100054480
388 Ga0070669_100500923
389 Ga0070659_100005000
390 Ga0070667_101127531
391 Ga0070662_101427940
392 Ga0068867_100512112
393 Ga0070693_100480924
394 Ga0068855_100204667
395 Ga0068857_100022072
396 Ga0068860_100000046
397 Ga0075366_10000261
398 Ga0097621_100414282
399 Ga0075370_10259569
400 Ga0079104_1000005
401 Ga0099826_10064639
402 Ga0105240_10000520
403 Ga0105240_10270730
404 Ga0105241_10104237
405 Ga0105237_10002729
406 Ga0105237_10003434
407 Ga0105237_10007806
408 Ga0105237_10010168
409 Ga0105238_10002208
410 Ga0105249_10278681
411 Ga0105239_10000001
412 Ga0105239_10008608
413 Ga0105239_10028319
414 Ga0105239_10146558
415 Ga0105239_10620971
416 Ga0105239_10686038
417 Ga0157373_10000015
418 Ga0157373_10000036
419 Ga0157373_10003820
420 Ga0157373_10247659
421 Ga0157371_10000542
422 Ga0157371_10002946
423 Ga0157371_10009816
424 Ga0157371_10040503
425 Ga0157371_10659111
426 Ga0157370_10000399
427 Ga0157370_10000465
428 Ga0157370_10003500
429 Ga0157370_10049503
430 Ga0157370_10055865
431 Ga0157370_10199497
432 Ga0157370_10350144
433 Ga0157370_10386787
434 Ga0157370_10437737
435 Ga0157370_10488146
436 Ga0157370_10883832
437 Ga0157369_10010263
438 Ga0157369_10044949
439 Ga0157369_10221609
440 Ga0157369_11138799
441 Ga0163162_10002529
442 Ga0163162_10006487
443 Ga0163162_10687641
444 Ga0163162_11332841
445 Ga0157372_10000173
446 Ga0157372_10001390
447 Ga0157372_10086703
448 Ga0157375_12060616
449 Ga0182008_10000001
450 Ga0182008_10047533
451 Ga0182006_1000011
452 Ga0182006_1000999
453 Ga0182006_1001271
454 Ga0182005_1000202
455 Ga0163161_10000527
456 Ga0163161_10001157
457 Ga0163161_10050013
458 Ga0209436_100770
459 Ga0207427_100122
460 Ga0207427_106393
461 Ga0209437_100048
462 Ga0209437_100119
463 Ga0209258_100697
464 Ga0207425_1000004
465 Ga0209148_1001122
466 Ga0209129_1000005
467 Ga0209129_1010646
468 Ga0209233_1000029
469 Ga0209233_1001847
470 Ga0209130_1002699
471 Ga0209025_1000009
472 Ga0209758_1000010
473 Ga0209758_1102540
474 Ga0207426_1000135
475 Ga0209257_1000008
476 Ga0207655_1000381
477 Ga0207680_10293161
478 Ga0207647_10002110
479 Ga0207647_10103501
480 Ga0207654_10001582
481 Ga0207695_10001716
482 Ga0207695_10405189
483 Ga0207671_10000609
484 Ga0207671_10001993
485 Ga0207671_10006059
486 Ga0207671_10012842
487 Ga0207671_10425700
488 Ga0207681_10487638
489 Ga0207694_10052950
490 Ga0207690_10067555
491 Ga0207661_10025980
492 Ga0207640_10009382
493 Ga0207658_11197913
494 Ga0207639_10037458
495 Ga0207674_10031003
496 Ga0207674_10033219
497 Ga0209281_1000566
498 Ga0209489_117438
499 Ga0209282_1052071
500 Ga0268266_10000049
501 Ga0268264_10000041
502 Ga0307517_10099856
503 Ga0307515_10001710
504 Ga0307515_10001900
505 Ga0316179_1002546
506 Ga0316181_1198747
507 Ga0307408_100007904
508 Ga0307508_10448904
509 Ga0307405_10574154
510 Ga0307413_10000257
511 Ga0307410_10000089
512 Ga0307406_10000037
513 Ga0307407_10005460
514 Ga0307412_10000012
515 Ga0307412_10000017
516 Ga0307416_100000010
517 Ga0307414_10000012
518 Ga0307414_10007370
519 Ga0307414_10055715
520 Ga0307414_10162098
521 Ga0307414_10664366
522 Ga0307414_10676361
523 Ga0307414_10856174
524 Ga0307411_10000001
525 Ga0307507_10000309
526 Ga0307510_10000671
527 Ga0439447_002887
528 Ga0439466_0002630
529 Ga0451787_835760
530 Ga0451798_0731987
531 Ga0466972_0004670
532 Ga0466972_0115814
533 Ga0466968_0035357
534 Ga0466970_0001499
535 Ga0495627_002302
536 Ga0495629_0403714
537 Ga0495638_0114009
538 Ga0495651_0410643
539 Ga0495650_0000144
540 Ga0495585_0000091
541 Ga0495585_0000241
542 Ga0495583_0024629
543 Ga0495583_0254621
544 Ga0495606_0000430
545 Ga0495606_0009540
546 Ga0495606_0021269
547 Ga0495606_0047312
548 Ga0495610_0000001
549 Ga0495610_0008174
550 Ga0495632_0125280
551 Ga0495637_0139650
552 Ga0495643_0031853
553 Ga0495648_0004406
554 Ga0495648_0005249
555 Ga0495663_0000151
556 Ga0495663_0011172
557 Ga0495652_0457723
558 Ga0495609_0048637
559 Ga0495609_0084056
560 Ga0495622_0043496
561 Ga0495633_0007299
562 Ga0495668_0000054
563 Ga0495625_0000059
564 Ga0495625_0000355
565 Ga0495625_0000548
566 Ga0495625_0061683
567 Ga0495661_0057199
568 Ga0495661_0174991
569 Ga0495658_0020053
570 Ga0495649_0000031
571 Ga0495660_0017429
572 Ga0495660_0113604
573 Ga0495683_0071605
574 Ga0495687_000001
575 Ga0495687_037873
576 Ga0495677_0162289
577 Ga0495686_0000118
578 Ga0495686_0056393
579 Ga0495614_0004728
580 Ga0496115_0026826
581 Ga0496116_0000030
582 Ga0496118_0120961
583 Ga0496122_0000390
584 Ga0496122_0025913
585 Ga0496123_0003629
586 Ga0496123_0094388
587 Ga0496124_0015286
588 Ga0496124_0560294
589 Ga0496125_0000035
590 Ga0496125_0034519
591 Ga0496126_0012027
592 Ga0496126_0457101
593 Ga0495682_0011476
594 Ga0501314_000692
595 Ga0501323_006127
596 Ga0501238_000032
597 Ga0501249_001131
598 Ga0501249_020753
599 Ga0501241_001523
600 Ga0501241_005604
601 Ga0501241_121024
602 Ga0501266_000005
603 Ga0501269_012718
604 Ga0501280_000125
605 Ga0501284_00168
606 nmdc:mga0k408_245_c1
607 nmdc:mga07m45_206109_c1
608 Ga0500644_0000589
609 Ga0500646_0002442
610 Ga0500583_0039432
611 Ga0500651_0137295
612 Ga0500641_0000004
613 Ga0500607_160953
614 Ga0500614_010285
615 Ga0500618_000018
616 Ga0500618_020719
617 Ga0500655_012157
618 Ga0500658_0000024
619 Ga0500658_0013904
620 Ga0500559_0008658
621 Ga0500559_0024048
622 Ga0500568_0051903
623 Ga0500577_0001002
624 Ga0500577_0342916
625 Ga0500590_238521
626 Ga0500616_0151095
627 Ga0500633_0031077
628 Ga0500637_0367754
629 2513234805
630 2520878955
631 2585158520
632 2585162842
633 2587747900
634 2587866766
635 2588446409
636 2590611556
637 2599481990
638 2644642889
639 2644685132
640 2729203138
641 2738736531
642 2738754374
643 2738763946
644 2738766830
645 2739218113
646 2739300983
647 2740000958
648 2740005774
649 2740057586
650 2776613587
651 2802654045
652 2817415932
653 2819577471
654 2819678448
655 2842084164
656 2842908095
657 2857615954
658 2857622985
659 2896089821
660 2903896281
661 2904422147
662 2906000834
663 2919186872
664 2919440528
665 2928082098
666 2928149324
667 2929180798
668 2929244490
669 2932087940
670 2939665859
671 2945983195
672 2946017414
673 2946021370
674 2958460763
675 2977269844
676 2984575955
677 2984609410
678 8054308170
679 8055593919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01047

MarR

MarR family

64

119

0.96

PF12802

MarR_2

MarR family

60

119

0.9

PF13463

HTH_27

Winged helix DNA-binding domain

68

128

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9474 53 110
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.939 53 111
4lb5-assembly1.cif.gz_A-2 crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.9384 53 110
8iuh-assembly1.cif.gz_P rna polymerase iii pre-initiation complex open complex 1 0.9135 64 111
4ija-assembly1.cif.gz_B structure of s. aureus methicillin resistance factor mecr2 0.9111 53 109
ID Description Score Start End Superfamily
af_K7LWV0_206_275_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9811 64 94 1.10.10.10
2xrnA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9807 53 95 1.10.10.10
2ia2D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.973 64 94 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9706 54 108 1.10.10.10
af_P30852_292_361_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9644 63 94 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A1Q3PMU2-F1-model_v4 MarR family transcriptional regulator 0.982 10 164 GO:0005737
GO:0008080
AF-A0A1M7I3E2-F1-model_v4 Predicted N-acyltransferase, GNAT family 0.9819 12 164 GO:0003677
GO:0003700
GO:0005737
GO:0006950
GO:0016747
AF-A0A1I0S6W7-F1-model_v4 DNA-binding transcriptional regulator, MarR family 0.9773 11 163 GO:0003677
GO:0003700
GO:0005737
GO:0006950
AF-A0A081PKR4-F1-model_v4 HTH marR-type domain-containing protein 0.9771 11 164 GO:0003700
GO:0005737
GO:0006950
AF-I3C1T4-F1-model_v4 Transcriptional regulator 0.9729 10 163 GO:0003677
GO:0003700
GO:0005737
GO:0006950
GO:0016747

Map