F414447

General Info

Members Datasets Scaffolds Average Seq Length
340 192 680 161

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0689768|Ga0466963_0689768_15_575
Length 186
Sequence MLPVVDGAEGDDFRTPGTRATSHRDRHLVLDDISRAINEQLQEDGRRSYARIAAAVGLSEAAVRQRVQRLLDAGVMQIVAVTDPLQVGFARQAMVGVRARGDVRAVADALAARPEIDYVVVTAGSFDVIVEIVCEDDDHLLETVARIRDVDGVESTETFVYLGLRKQTYAWGTRRSEGPAPGAPEA

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
33 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
65 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
66 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
67 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
86 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
87 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
88 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
89 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
90 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
91 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
92 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
93 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
94 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
95 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
96 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
97 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
98 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
99 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
102 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
103 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
108 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
111 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
112 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
113 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
114 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
115 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
116 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
125 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
126 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
131 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
132 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
133 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
136 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
140 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
141 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
142 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
143 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
157 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
160 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
163 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
164 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
165 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
166 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
169 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
170 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
171 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
172 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
173 2643221679 Angustibacter sp. Root456 Isolate Unclassified
174 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
175 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
176 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
177 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
178 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
179 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
180 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
181 2855683550 Micromonospora sp. RP3T Isolate Unclassified
182 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
183 2858868258 Micromonospora sp. MH33 Isolate Unclassified
184 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
185 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
186 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
187 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
188 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
189 2902582711 Micromonospora sp. AP08 Isolate Unclassified
190 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
191 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
192 649633069 Micromonospora sp. L5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.47
Metatranscriptomes 1.47
Isolates 7.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.24
Nodule 0
Rhizoplane 9.41
Rhizosphere 78.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0689768 3300044694 Bacteria 721
2 LJQas_1018727 3300000549 Bacteria 805
3 JGI24735J21928_10089455 3300002067 Bacteria 882
4 Ga0070658_10001495 3300005327 Bacteria 19826
5 Ga0070658_10273268 3300005327 Bacteria 1438
6 Ga0070658_10540582 3300005327 Bacteria 1008
7 Ga0070683_100218780 3300005329 Bacteria 1810
8 Ga0070683_100455240 3300005329 Bacteria 1221
9 Ga0070683_100768595 3300005329 Bacteria 923
10 Ga0070680_100200966 3300005336 Bacteria 1681
11 Ga0070680_100341632 3300005336 Bacteria 1272
12 Ga0070680_100411728 3300005336 Bacteria 1153
13 Ga0068868_100768460 3300005338 Bacteria 867
14 Ga0070660_100076822 3300005339 Bacteria 2616
15 Ga0070687_100796517 3300005343 Bacteria 669
16 Ga0070661_100346772 3300005344 Bacteria 1164
17 Ga0070713_100220613 3300005436 Bacteria 1720
18 Ga0070713_100982012 3300005436 Bacteria 814
19 Ga0070663_100209510 3300005455 Bacteria 1526
20 Ga0070681_10032992 3300005458 Bacteria 5198
21 Ga0070698_100548135 3300005471 Bacteria 1096
22 Ga0070679_100043959 3300005530 Bacteria 4449
23 Ga0070679_100159316 3300005530 Bacteria 2232
24 Ga0070679_100782875 3300005530 Bacteria 897
25 Ga0070679_100794289 3300005530 Bacteria 890
26 Ga0070679_101122586 3300005530 Bacteria 731
27 Ga0070684_100708103 3300005535 Bacteria 939
28 Ga0070684_101302003 3300005535 Bacteria 684
29 Ga0070665_100383986 3300005548 Bacteria 1412
30 Ga0068855_100534885 3300005563 Bacteria 1270
31 Ga0070664_101360926 3300005564 Bacteria 671
32 Ga0068856_101266159 3300005614 Bacteria 753
33 Ga0068856_101289952 3300005614 Bacteria 746
34 Ga0068852_101006856 3300005616 Bacteria 852
35 Ga0105244_10078592 3300009036 Bacteria 1636
36 Ga0105245_10271091 3300009098 Bacteria 1656
37 Ga0105245_11259474 3300009098 Bacteria 788
38 Ga0105243_10108289 3300009148 Bacteria 2319
39 Ga0105243_10244180 3300009148 Bacteria 1600
40 Ga0105239_11559663 3300010375 Bacteria 763
41 Ga0105246_10592846 3300011119 Bacteria 956
42 Ga0157371_10000615 3300013102 Bacteria 42407
43 Ga0157371_10197069 3300013102 Bacteria 1443
44 Ga0157369_10152237 3300013105 Bacteria 2445
45 Ga0157372_10343817 3300013307 Bacteria 1738
46 Ga0157372_11337177 3300013307 Bacteria 826
47 Ga0157372_11413597 3300013307 Bacteria 802
48 Ga0157375_10590866 3300013308 Bacteria 1270
49 Ga0163163_10274507 3300014325 Bacteria 1737
50 Ga0157377_10257492 3300014745 Bacteria 1134
51 Ga0157377_10504208 3300014745 Bacteria 846
52 Ga0206354_10442585 3300020081 Bacteria 653
53 Ga0206353_11873651 3300020082 Bacteria 2166
54 Ga0213876_10136069 3300021384 Bacteria 1307
55 Ga0224712_10278623 3300022467 Bacteria 778
56 Ga0207692_10806831 3300025898 Bacteria 614
57 Ga0207647_10026634 3300025904 Bacteria 3780
58 Ga0207705_10006477 3300025909 Bacteria 8672
59 Ga0207707_10450041 3300025912 Bacteria 1102
60 Ga0207660_10061978 3300025917 Bacteria 2694
61 Ga0207660_10222145 3300025917 Bacteria 1483
62 Ga0207660_10537807 3300025917 Bacteria 950
63 Ga0207657_10037669 3300025919 Bacteria 4315
64 Ga0207657_10710987 3300025919 Bacteria 780
65 Ga0207652_10043149 3300025921 Bacteria 3840
66 Ga0207652_10178296 3300025921 Bacteria 1909
67 Ga0207700_10351799 3300025928 Bacteria 1283
68 Ga0207664_11162933 3300025929 Bacteria 689
69 Ga0207704_10247872 3300025938 Bacteria 1335
70 Ga0207661_10576480 3300025944 Bacteria 1032
71 Ga0207661_10875220 3300025944 Bacteria 827
72 Ga0207640_10518228 3300025981 Bacteria 996
73 Ga0207678_10121351 3300026067 Bacteria 2230
74 Ga0207702_10504494 3300026078 Bacteria 1180
75 Ga0207702_11429090 3300026078 Bacteria 685
76 Ga0207648_10301815 3300026089 Bacteria 1436
77 Ga0207698_11021580 3300026142 Bacteria 838
78 Ga0268266_10327070 3300028379 Bacteria 1436
79 Ga0265334_10073568 3300028573 Bacteria 1269
80 Ga0307515_10608030 3300028794 Bacteria 704
81 Ga0265338_10158113 3300028800 Bacteria 1753
82 Ga0265330_10096462 3300031235 Bacteria 1267
83 Ga0265325_10002725 3300031241 Bacteria 11804
84 Ga0265325_10020177 3300031241 Bacteria 3676
85 Ga0265340_10003002 3300031247 Bacteria 9598
86 Ga0265340_10005590 3300031247 Bacteria 6971
87 Ga0265339_10007211 3300031249 Bacteria 7204
88 Ga0265327_10013924 3300031251 Bacteria 5303
89 Ga0307513_10027362 3300031456 Bacteria 6550
90 Ga0265313_10058918 3300031595 Bacteria 1808
91 Ga0316579_10000436 3300031691 Bacteria 13285
92 Ga0265314_10010125 3300031711 Bacteria 7902
93 Ga0265314_10380244 3300031711 Bacteria 769
94 Ga0265342_10024030 3300031712 Bacteria 3851
95 Ga0307405_10153953 3300031731 Bacteria 1620
96 Ga0307405_10285995 3300031731 Bacteria 1244
97 Ga0307405_10437382 3300031731 Bacteria 1034
98 Ga0307413_10153651 3300031824 Bacteria 1607
99 Ga0307413_10195095 3300031824 Bacteria 1457
100 Ga0307413_10757746 3300031824 Bacteria 812
101 Ga0307410_10037515 3300031852 Bacteria 3166
102 Ga0307410_10040960 3300031852 Bacteria 3052
103 Ga0307410_10060825 3300031852 Bacteria 2583
104 Ga0307410_10079953 3300031852 Bacteria 2292
105 Ga0307410_10803522 3300031852 Bacteria 800
106 Ga0307410_11027204 3300031852 Bacteria 712
107 Ga0307406_10123178 3300031901 Bacteria 1806
108 Ga0307406_10311785 3300031901 Bacteria 1213
109 Ga0307407_10202381 3300031903 Bacteria 1331
110 Ga0307412_10080911 3300031911 Bacteria 2245
111 Ga0307412_10657447 3300031911 Bacteria 895
112 Ga0307412_10940646 3300031911 Bacteria 760
113 Ga0307409_100094788 3300031995 Bacteria 2457
114 Ga0307409_100119213 3300031995 Bacteria 2230
115 Ga0307409_100143368 3300031995 Bacteria 2062
116 Ga0307409_100216212 3300031995 Bacteria 1727
117 Ga0307409_100583698 3300031995 Bacteria 1102
118 Ga0307416_101009638 3300032002 Bacteria 935
119 Ga0307416_101844344 3300032002 Bacteria 708
120 Ga0307414_10048635 3300032004 Bacteria 2927
121 Ga0307414_10368155 3300032004 Bacteria 1239
122 Ga0307414_11157676 3300032004 Bacteria 715
123 Ga0307411_10166912 3300032005 Bacteria 1656
124 Ga0307411_10504572 3300032005 Bacteria 1023
125 Ga0307415_100235532 3300032126 Bacteria 1477
126 Ga0307415_100385498 3300032126 Bacteria 1191
127 Ga0307415_100461103 3300032126 Bacteria 1101
128 Ga0307415_100848420 3300032126 Bacteria 838
129 Ga0307415_101653325 3300032126 Bacteria 616
130 Ga0373947_0501533 3300035725 Bacteria 825
131 Ga0316584_0032295 3300036712 Bacteria 3875
132 Ga0395899_0367707 3300037312 Bacteria 958
133 Ga0395900_0079528 3300037418 Bacteria 3369
134 Ga0395900_0198011 3300037418 Bacteria 2034
135 Ga0395900_0429222 3300037418 Bacteria 1281
136 Ga0395898_0016716 3300037466 Bacteria 7498
137 Ga0395898_0041532 3300037466 Bacteria 4543
138 Ga0395898_0130211 3300037466 Bacteria 2410
139 Ga0395901_0004136 3300038443 Bacteria 14633
140 Ga0395901_0016151 3300038443 Bacteria 7604
141 Ga0395901_0263285 3300038443 Bacteria 1794
142 Ga0395901_0385569 3300038443 Bacteria 1442
143 Ga0395901_0742392 3300038443 Bacteria 975
144 Ga0436365_0773918 3300039437 Bacteria 51915
145 Ga0436365_0856259 3300039437 Bacteria 675
146 Ga0436365_1457650 3300039437 Bacteria 4368
147 Ga0439436_0166051 3300041404 Bacteria 625
148 Ga0439439_0073025 3300041406 Bacteria 921
149 Ga0439461_0033964 3300041410 Bacteria 1075
150 Ga0451797_1186598 3300041453 Bacteria 797
151 Ga0451806_678666 3300041462 Bacteria 1073
152 Ga0451807_2049533 3300041486 Bacteria 879
153 Ga0451847_0220781 3300041503 Bacteria 887
154 Ga0439431_0008610 3300041997 Bacteria 2296
155 Ga0439442_102029 3300042002 Bacteria 621
156 Ga0439446_0090677 3300042156 Bacteria 956
157 Ga0439434_0008685 3300042435 Bacteria 2984
158 Ga0466969_0142342 3300044656 Bacteria 1108
159 Ga0466969_0274326 3300044656 Bacteria 764
160 Ga0466965_0072494 3300044683 Bacteria 1733
161 Ga0466965_0103190 3300044683 Bacteria 1460
162 Ga0466965_0121694 3300044683 Bacteria 1348
163 Ga0466965_0138339 3300044683 Bacteria 1266
164 Ga0466965_0198635 3300044683 Bacteria 1063
165 Ga0466965_0469097 3300044683 Bacteria 703
166 Ga0466965_0598161 3300044683 Bacteria 626
167 Ga0466966_0090078 3300044684 Bacteria 1905
168 Ga0466966_0162767 3300044684 Bacteria 1358
169 Ga0466966_0212987 3300044684 Bacteria 1167
170 Ga0466966_0399540 3300044684 Bacteria 826
171 Ga0466961_0127303 3300044693 Bacteria 1597
172 Ga0466961_0375216 3300044693 Bacteria 864
173 Ga0466963_0070184 3300044694 Bacteria 2356
174 Ga0466963_0085908 3300044694 Bacteria 2137
175 Ga0466963_0105406 3300044694 Bacteria 1932
176 Ga0466963_0140411 3300044694 Bacteria 1673
177 Ga0466963_0141120 3300044694 Bacteria 1669
178 Ga0466963_0249243 3300044694 Bacteria 1246
179 Ga0466963_0276104 3300044694 Bacteria 1181
180 Ga0466963_0428072 3300044694 Bacteria 933
181 Ga0466963_0728891 3300044694 Bacteria 699
182 Ga0466971_0040549 3300044719 Bacteria 2091
183 Ga0466971_0152800 3300044719 Bacteria 1078
184 Ga0466971_0596661 3300044719 Bacteria 550
185 Ga0466970_0067533 3300044765 Bacteria 1920
186 Ga0466970_0190018 3300044765 Bacteria 1141
187 Ga0466957_0034955 3300044842 Bacteria 3015
188 Ga0466957_0046856 3300044842 Bacteria 2626
189 Ga0466957_0140757 3300044842 Bacteria 1554
190 Ga0466957_0141124 3300044842 Bacteria 1552
191 Ga0466957_0190016 3300044842 Bacteria 1345
192 Ga0466957_0385304 3300044842 Bacteria 957
193 Ga0466957_0568609 3300044842 Bacteria 791
194 Ga0466957_0584034 3300044842 Bacteria 781
195 Ga0466960_0071693 3300044901 Bacteria 1726
196 Ga0466960_0078419 3300044901 Bacteria 1658
197 Ga0466960_0120605 3300044901 Bacteria 1373
198 Ga0466960_0211315 3300044901 Bacteria 1064
199 Ga0466960_0376338 3300044901 Bacteria 814
200 Ga0466960_0676314 3300044901 Bacteria 618
201 Ga0466959_0088422 3300045049 Bacteria 2227
202 Ga0466959_0195928 3300045049 Bacteria 1408
203 Ga0466959_0291360 3300045049 Bacteria 1119
204 Ga0466959_0301653 3300045049 Bacteria 1097
205 Ga0466959_0767243 3300045049 Bacteria 645
206 Ga0466958_0061148 3300045836 Bacteria 2293
207 Ga0466958_0243295 3300045836 Bacteria 1150
208 Ga0466958_0250235 3300045836 Bacteria 1133
209 Ga0466958_0345504 3300045836 Bacteria 957
210 Ga0466958_0444394 3300045836 Bacteria 839
211 Ga0466967_0001837 3300045976 Bacteria 12769
212 Ga0466967_0006995 3300045976 Bacteria 8073
213 Ga0466967_0011103 3300045976 Bacteria 6804
214 Ga0466967_0016382 3300045976 Bacteria 5844
215 Ga0466967_0019459 3300045976 Bacteria 5459
216 Ga0466967_0028961 3300045976 Bacteria 4629
217 Ga0466967_0074951 3300045976 Bacteria 3040
218 Ga0466967_0133001 3300045976 Bacteria 2311
219 Ga0466967_0379518 3300045976 Bacteria 1372
220 Ga0466967_0381006 3300045976 Bacteria 1369
221 Ga0466967_0417280 3300045976 Bacteria 1308
222 Ga0466967_0641646 3300045976 Bacteria 1050
223 Ga0466967_1086174 3300045976 Bacteria 797
224 Ga0466967_2061158 3300045976 Bacteria 567
225 Ga0495629_0065132 3300046459 Bacteria 2544
226 Ga0495641_0029216 3300046461 Bacteria 2658
227 Ga0495641_0175858 3300046461 Bacteria 958
228 Ga0495582_0351538 3300046473 Bacteria 849
229 Ga0495618_0130386 3300046514 Bacteria 1609
230 Ga0495630_0839756 3300046517 Bacteria 701
231 Ga0495663_0095600 3300046525 Bacteria 973
232 Ga0495586_0223252 3300046535 Bacteria 1071
233 Ga0495587_0555685 3300046536 Bacteria 633
234 Ga0495598_0202097 3300046537 Bacteria 718
235 Ga0495609_0387957 3300046538 Bacteria 560
236 Ga0495621_0062954 3300046539 Bacteria 1351
237 Ga0495657_0109704 3300046675 Bacteria 1750
238 Ga0495646_0133858 3300046680 Bacteria 1393
239 Ga0495672_0004883 3300047320 Bacteria 10782
240 Ga0495672_0308562 3300047320 Bacteria 747
241 Ga0495680_0110400 3300047322 Bacteria 2038
242 Ga0495686_0563301 3300047472 Bacteria 594
243 Ga0496100_0090036 3300048903 Bacteria 2092
244 Ga0496100_0091988 3300048903 Bacteria 2072
245 Ga0496101_0028342 3300048904 Bacteria 3909
246 Ga0496101_0605531 3300048904 Bacteria 866
247 Ga0496102_0001270 3300048905 Bacteria 22785
248 Ga0496103_0270169 3300048906 Bacteria 1094
249 Ga0496104_0059082 3300048907 Bacteria 3630
250 Ga0496104_0101566 3300048907 Bacteria 2754
251 Ga0496104_0528034 3300048907 Bacteria 1091
252 Ga0496104_0545286 3300048907 Bacteria 1071
253 Ga0496104_0581300 3300048907 Bacteria 1031
254 Ga0496105_0167758 3300048908 Bacteria 1801
255 Ga0496105_0220430 3300048908 Bacteria 1544
256 Ga0496106_0842803 3300048909 Bacteria 726
257 Ga0496108_0321211 3300048911 Bacteria 1350
258 Ga0496109_0348487 3300048912 Bacteria 1399
259 Ga0496109_1613802 3300048912 Bacteria 583
260 Ga0496110_0636351 3300048913 Bacteria 966
261 Ga0496111_0572863 3300048914 Bacteria 828
262 Ga0496112_0011748 3300048915 Bacteria 8018
263 Ga0496112_0154297 3300048915 Bacteria 2264
264 Ga0496113_0530427 3300048916 Bacteria 945
265 Ga0496113_1093883 3300048916 Bacteria 625
266 Ga0496113_1135922 3300048916 Bacteria 612
267 Ga0496114_0002640 3300048917 Bacteria 13678
268 Ga0496114_0006600 3300048917 Bacteria 9147
269 Ga0496114_0207567 3300048917 Bacteria 1717
270 Ga0496114_0341139 3300048917 Bacteria 1325
271 Ga0496115_0434494 3300048918 Bacteria 1062
272 Ga0496117_0000216 3300048920 Bacteria 111598
273 Ga0496120_0081971 3300048923 Bacteria 1744
274 Ga0496122_0006278 3300048925 Bacteria 13718
275 Ga0496123_0004998 3300048926 Bacteria 13575
276 Ga0496124_0367153 3300048927 Bacteria 1012
277 Ga0501317_013510 3300049533 Bacteria 1022
278 Ga0501318_011558 3300049534 Bacteria 1000
279 Ga0501033_0744754 3300049570 Bacteria 665
280 Ga0501034_0121474 3300049571 Bacteria 2598
281 Ga0501034_0998439 3300049571 Bacteria 721
282 Ga0501036_0332301 3300049572 Bacteria 1270
283 Ga0501041_0538439 3300049577 Bacteria 744
284 Ga0501046_0133465 3300049580 Bacteria 1882
285 Ga0501047_0116530 3300049581 Bacteria 2553
286 Ga0501070_0002367 3300049586 Bacteria 16533
287 Ga0501070_0003761 3300049586 Bacteria 13104
288 Ga0501070_0220633 3300049586 Bacteria 1555
289 Ga0501071_0000717 3300049587 Bacteria 17435
290 Ga0501073_0860331 3300049589 Bacteria 625
291 Ga0501074_0163917 3300049590 Bacteria 1587
292 Ga0501079_0610127 3300049741 Bacteria 859
293 Ga0501080_0082948 3300049742 Bacteria 2978
294 Ga0501035_0412534 3300049822 Bacteria 1122
295 Ga0501044_0138403 3300049823 Bacteria 2424
296 Ga0501045_0500176 3300049824 Bacteria 903
297 nmdc:mga05p37_188194_c1 3300050507 Bacteria 2508
298 nmdc:mga05p37_258735_c1 3300050507 Bacteria 2084
299 nmdc:mga09592_1569296_c1 3300050508 Bacteria 534
300 Ga0495619_1031733 3300053085 Bacteria 549
301 Ga0500650_0006877 3300053098 Bacteria 4379
302 Ga0500559_0000074 3300053136 Bacteria 78568
303 Ga0500559_0014377 3300053136 Bacteria 3345
304 Ga0500573_0000007 3300053140 Bacteria 272970
305 Ga0500573_0031628 3300053140 Bacteria 3054
306 Ga0500573_0051005 3300053140 Bacteria 2380
307 Ga0500573_0065686 3300053140 Bacteria 2074
308 Ga0500573_0082253 3300053140 Bacteria 1829
309 Ga0500573_0139274 3300053140 Bacteria 1337
310 Ga0500577_0020548 3300053142 Bacteria 2161
311 Ga0500577_0029882 3300053142 Bacteria 1891
312 Ga0501084_1264495 3300054114 Bacteria 619
313 Ga0466962_0074914 3300061719 Bacteria 1617
314 Ga0466962_0255514 3300061719 Bacteria 862
315 Ga0466962_0263190 3300061719 Bacteria 849
316 Ga0466962_0266189 3300061719 Bacteria 844
317 2515493686 2515154088 Bacteria 5526283
318 2516087782 2515154203 Bacteria 5458536
319 2623586725 2622736626 Bacteria 7181580
320 2644198966 2643221635 Bacteria 2632343
321 2644446544 2643221679 Bacteria 3839507
322 2644506589 2643221690 Bacteria 4654705
323 2644526497 2643221694 Bacteria 4392972
324 2644671163 2643221722 Bacteria 4247614
325 2753038031 2751185725 Bacteria 5740550
326 2753325899 2751185792 Bacteria 5739090
327 2832006356 2832004796 Bacteria 6538017
328 2852645085 2852643534 Bacteria 3013378
329 2855684866 2855683550 Bacteria 7134265
330 2856860638 2856858025 Bacteria 7255264
331 2858875744 2858868258 Bacteria 7683772
332 2858903381 2858902515 Bacteria 7086037
333 2866070017 2866065130 Bacteria 6518152
334 2867304073 2867302475 Bacteria 7087181
335 2867509584 2867507094 Bacteria 6506033
336 2870623067 2870622029 Bacteria 3643329
337 2902585613 2902582711 Bacteria 6187705
338 2939657471 2939657138 Bacteria 3740283
339 2996227074 2996221748 Bacteria 6799777
340 649811373 649633069 Bacteria 6962533
341 Ga0466963_0689768
342 LJQas_1018727
343 JGI24735J21928_10089455
344 Ga0070658_10001495
345 Ga0070658_10273268
346 Ga0070658_10540582
347 Ga0070683_100218780
348 Ga0070683_100455240
349 Ga0070683_100768595
350 Ga0070680_100200966
351 Ga0070680_100341632
352 Ga0070680_100411728
353 Ga0068868_100768460
354 Ga0070660_100076822
355 Ga0070687_100796517
356 Ga0070661_100346772
357 Ga0070713_100220613
358 Ga0070713_100982012
359 Ga0070663_100209510
360 Ga0070681_10032992
361 Ga0070698_100548135
362 Ga0070679_100043959
363 Ga0070679_100159316
364 Ga0070679_100782875
365 Ga0070679_100794289
366 Ga0070679_101122586
367 Ga0070684_100708103
368 Ga0070684_101302003
369 Ga0070665_100383986
370 Ga0068855_100534885
371 Ga0070664_101360926
372 Ga0068856_101266159
373 Ga0068856_101289952
374 Ga0068852_101006856
375 Ga0105244_10078592
376 Ga0105245_10271091
377 Ga0105245_11259474
378 Ga0105243_10108289
379 Ga0105243_10244180
380 Ga0105239_11559663
381 Ga0105246_10592846
382 Ga0157371_10000615
383 Ga0157371_10197069
384 Ga0157369_10152237
385 Ga0157372_10343817
386 Ga0157372_11337177
387 Ga0157372_11413597
388 Ga0157375_10590866
389 Ga0163163_10274507
390 Ga0157377_10257492
391 Ga0157377_10504208
392 Ga0206354_10442585
393 Ga0206353_11873651
394 Ga0213876_10136069
395 Ga0224712_10278623
396 Ga0207692_10806831
397 Ga0207647_10026634
398 Ga0207705_10006477
399 Ga0207707_10450041
400 Ga0207660_10061978
401 Ga0207660_10222145
402 Ga0207660_10537807
403 Ga0207657_10037669
404 Ga0207657_10710987
405 Ga0207652_10043149
406 Ga0207652_10178296
407 Ga0207700_10351799
408 Ga0207664_11162933
409 Ga0207704_10247872
410 Ga0207661_10576480
411 Ga0207661_10875220
412 Ga0207640_10518228
413 Ga0207678_10121351
414 Ga0207702_10504494
415 Ga0207702_11429090
416 Ga0207648_10301815
417 Ga0207698_11021580
418 Ga0268266_10327070
419 Ga0265334_10073568
420 Ga0307515_10608030
421 Ga0265338_10158113
422 Ga0265330_10096462
423 Ga0265325_10002725
424 Ga0265325_10020177
425 Ga0265340_10003002
426 Ga0265340_10005590
427 Ga0265339_10007211
428 Ga0265327_10013924
429 Ga0307513_10027362
430 Ga0265313_10058918
431 Ga0316579_10000436
432 Ga0265314_10010125
433 Ga0265314_10380244
434 Ga0265342_10024030
435 Ga0307405_10153953
436 Ga0307405_10285995
437 Ga0307405_10437382
438 Ga0307413_10153651
439 Ga0307413_10195095
440 Ga0307413_10757746
441 Ga0307410_10037515
442 Ga0307410_10040960
443 Ga0307410_10060825
444 Ga0307410_10079953
445 Ga0307410_10803522
446 Ga0307410_11027204
447 Ga0307406_10123178
448 Ga0307406_10311785
449 Ga0307407_10202381
450 Ga0307412_10080911
451 Ga0307412_10657447
452 Ga0307412_10940646
453 Ga0307409_100094788
454 Ga0307409_100119213
455 Ga0307409_100143368
456 Ga0307409_100216212
457 Ga0307409_100583698
458 Ga0307416_101009638
459 Ga0307416_101844344
460 Ga0307414_10048635
461 Ga0307414_10368155
462 Ga0307414_11157676
463 Ga0307411_10166912
464 Ga0307411_10504572
465 Ga0307415_100235532
466 Ga0307415_100385498
467 Ga0307415_100461103
468 Ga0307415_100848420
469 Ga0307415_101653325
470 Ga0373947_0501533
471 Ga0316584_0032295
472 Ga0395899_0367707
473 Ga0395900_0079528
474 Ga0395900_0198011
475 Ga0395900_0429222
476 Ga0395898_0016716
477 Ga0395898_0041532
478 Ga0395898_0130211
479 Ga0395901_0004136
480 Ga0395901_0016151
481 Ga0395901_0263285
482 Ga0395901_0385569
483 Ga0395901_0742392
484 Ga0436365_0773918
485 Ga0436365_0856259
486 Ga0436365_1457650
487 Ga0439436_0166051
488 Ga0439439_0073025
489 Ga0439461_0033964
490 Ga0451797_1186598
491 Ga0451806_678666
492 Ga0451807_2049533
493 Ga0451847_0220781
494 Ga0439431_0008610
495 Ga0439442_102029
496 Ga0439446_0090677
497 Ga0439434_0008685
498 Ga0466969_0142342
499 Ga0466969_0274326
500 Ga0466965_0072494
501 Ga0466965_0103190
502 Ga0466965_0121694
503 Ga0466965_0138339
504 Ga0466965_0198635
505 Ga0466965_0469097
506 Ga0466965_0598161
507 Ga0466966_0090078
508 Ga0466966_0162767
509 Ga0466966_0212987
510 Ga0466966_0399540
511 Ga0466961_0127303
512 Ga0466961_0375216
513 Ga0466963_0070184
514 Ga0466963_0085908
515 Ga0466963_0105406
516 Ga0466963_0140411
517 Ga0466963_0141120
518 Ga0466963_0249243
519 Ga0466963_0276104
520 Ga0466963_0428072
521 Ga0466963_0728891
522 Ga0466971_0040549
523 Ga0466971_0152800
524 Ga0466971_0596661
525 Ga0466970_0067533
526 Ga0466970_0190018
527 Ga0466957_0034955
528 Ga0466957_0046856
529 Ga0466957_0140757
530 Ga0466957_0141124
531 Ga0466957_0190016
532 Ga0466957_0385304
533 Ga0466957_0568609
534 Ga0466957_0584034
535 Ga0466960_0071693
536 Ga0466960_0078419
537 Ga0466960_0120605
538 Ga0466960_0211315
539 Ga0466960_0376338
540 Ga0466960_0676314
541 Ga0466959_0088422
542 Ga0466959_0195928
543 Ga0466959_0291360
544 Ga0466959_0301653
545 Ga0466959_0767243
546 Ga0466958_0061148
547 Ga0466958_0243295
548 Ga0466958_0250235
549 Ga0466958_0345504
550 Ga0466958_0444394
551 Ga0466967_0001837
552 Ga0466967_0006995
553 Ga0466967_0011103
554 Ga0466967_0016382
555 Ga0466967_0019459
556 Ga0466967_0028961
557 Ga0466967_0074951
558 Ga0466967_0133001
559 Ga0466967_0379518
560 Ga0466967_0381006
561 Ga0466967_0417280
562 Ga0466967_0641646
563 Ga0466967_1086174
564 Ga0466967_2061158
565 Ga0495629_0065132
566 Ga0495641_0029216
567 Ga0495641_0175858
568 Ga0495582_0351538
569 Ga0495618_0130386
570 Ga0495630_0839756
571 Ga0495663_0095600
572 Ga0495586_0223252
573 Ga0495587_0555685
574 Ga0495598_0202097
575 Ga0495609_0387957
576 Ga0495621_0062954
577 Ga0495657_0109704
578 Ga0495646_0133858
579 Ga0495672_0004883
580 Ga0495672_0308562
581 Ga0495680_0110400
582 Ga0495686_0563301
583 Ga0496100_0090036
584 Ga0496100_0091988
585 Ga0496101_0028342
586 Ga0496101_0605531
587 Ga0496102_0001270
588 Ga0496103_0270169
589 Ga0496104_0059082
590 Ga0496104_0101566
591 Ga0496104_0528034
592 Ga0496104_0545286
593 Ga0496104_0581300
594 Ga0496105_0167758
595 Ga0496105_0220430
596 Ga0496106_0842803
597 Ga0496108_0321211
598 Ga0496109_0348487
599 Ga0496109_1613802
600 Ga0496110_0636351
601 Ga0496111_0572863
602 Ga0496112_0011748
603 Ga0496112_0154297
604 Ga0496113_0530427
605 Ga0496113_1093883
606 Ga0496113_1135922
607 Ga0496114_0002640
608 Ga0496114_0006600
609 Ga0496114_0207567
610 Ga0496114_0341139
611 Ga0496115_0434494
612 Ga0496117_0000216
613 Ga0496120_0081971
614 Ga0496122_0006278
615 Ga0496123_0004998
616 Ga0496124_0367153
617 Ga0501317_013510
618 Ga0501318_011558
619 Ga0501033_0744754
620 Ga0501034_0121474
621 Ga0501034_0998439
622 Ga0501036_0332301
623 Ga0501041_0538439
624 Ga0501046_0133465
625 Ga0501047_0116530
626 Ga0501070_0002367
627 Ga0501070_0003761
628 Ga0501070_0220633
629 Ga0501071_0000717
630 Ga0501073_0860331
631 Ga0501074_0163917
632 Ga0501079_0610127
633 Ga0501080_0082948
634 Ga0501035_0412534
635 Ga0501044_0138403
636 Ga0501045_0500176
637 nmdc:mga05p37_188194_c1
638 nmdc:mga05p37_258735_c1
639 nmdc:mga09592_1569296_c1
640 Ga0495619_1031733
641 Ga0500650_0006877
642 Ga0500559_0000074
643 Ga0500559_0014377
644 Ga0500573_0000007
645 Ga0500573_0031628
646 Ga0500573_0051005
647 Ga0500573_0065686
648 Ga0500573_0082253
649 Ga0500573_0139274
650 Ga0500577_0020548
651 Ga0500577_0029882
652 Ga0501084_1264495
653 Ga0466962_0074914
654 Ga0466962_0255514
655 Ga0466962_0263190
656 Ga0466962_0266189
657 2515493686
658 2516087782
659 2623586725
660 2644198966
661 2644446544
662 2644506589
663 2644526497
664 2644671163
665 2753038031
666 2753325899
667 2832006356
668 2852645085
669 2855684866
670 2856860638
671 2858875744
672 2858903381
673 2866070017
674 2867304073
675 2867509584
676 2870623067
677 2902585613
678 2939657471
679 2996227074
680 649811373

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13404

HTH_AsnC-type

AsnC-type helix-turn-helix domain

30

71

0.98

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

30

75

0.98

PF22482

AsnC_trans_reg_3

PF0864 C-terminal dimeric alpha+beta barrel domain

91

174

0.93

PF01037

AsnC_trans_reg

Lrp/AsnC ligand binding domain

94

163

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2e1a-assembly1.cif.gz_B crystal structure of ffrp-dm1 0.9537 70 141
2zbc-assembly1.cif.gz_C-2 crystal structure of sts042, a stand-alone ram module protein, from hyperthermophilic archaeon sulfolobus tokodaii strain7. 0.9345 71 146
2djw-assembly1.cif.gz_F crystal structure of ttha0845 from thermus thermophilus hb8 0.914 70 146
2e1a-assembly1.cif.gz_B crystal structure of ffrp-dm1 0.9056 70 141
2djw-assembly1.cif.gz_F crystal structure of ttha0845 from thermus thermophilus hb8 0.8716 70 146
ID Description Score Start End Superfamily
1i1gB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9549 10 58 1.10.10.10
2z4pD01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.9545 70 140 3.30.70.920
1i1gA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9499 10 58 1.10.10.10
2djwE01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.9454 70 140 3.30.70.920
2e1cA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9433 9 60 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7J2ISK7-F1-model_v4 Lrp/AsnC family transcriptional regulator 0.9869 70 140
AF-A0A2A5NY29-F1-model_v4 AsnC family transcriptional regulator 0.9832 70 140
AF-A0A7K4ILV0-F1-model_v4 Lrp/AsnC ligand binding domain-containing protein 0.9827 70 141
AF-A0A256XKP8-F1-model_v4 AsnC family transcriptional regulator 0.9808 70 141
AF-A0A401H8E1-F1-model_v4 HTH-type transcriptional regulator LysM 0.9783 71 143 GO:0005829
GO:0043200
GO:0043565

Map