F414735

General Info

Members Datasets Scaffolds Average Seq Length
341 199 682 712

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10088540|Ga0105237_100885402
Length 788
Sequence MALSFRTLASPFRDSNPTNLFNLLSIKLSPYPTFKPLSGSLHKPRSPISTYVNPLIDPAHHSFFPKFTMKQAIGFLLALCLSLTGTAQHILTIRIKDAKTNESLPGSTIRLKGANVAPADSAGLVRIAGLPGGRHMLQAGHVGYRTQSITLDIPVPGDTLIIDLERTGEEMGEVVVSSTRSSRTLRNIPTRVEVINGEELEEKGNMKPGDIRMMLNETTGIQTQQVSATSANSSIRIQGLDGRYTQILKDGFPLYAGFSGGLGLLQTPPLDLKQVEVIKGASSTLYGGGAIAGLVNLISKTPGPEKELRGLINGTSAGGLDINGYYGQQFGKAGITIYASQNSNRAYAPGNTIFTAIPRTQRNVVEPKLFLNLGKNTRLIAGVSATRENRLGGDIRYLDGKGDSTHSYYERNKSNRISTQLSLDHRLGDRSSVTIKNAYNHFDRTITIPGYVFDGSQGSTYSEAAWHYKTDGSDWIAGANLYTDAFREHPRGNFPSRSYSQTTTGIFLQNTWKATSWLQTEAGLRGDHVADYGWAILPRVAALFQLAPALTSRLGGGLGYKTPTIFTEETERIQLQNVLPIDPDSNRLERSYGINLDLNYRWRLSEKASINFNQLFFFTRIDHPLELQSEGARYRLVNSAGYIDSKGWETNIRISYADLRWYIGYTYTDAHLKEGGTLRENPLTARNRLNNILMYEIEDKFKLGFEAYYYGWQDLTDGTQGRPYWTFGLMGEKTWEHFSLFVNFENFTDTRQTHWGSIYTGTVSRPVFRDIYAPLDGIVVNGGIKIKL

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
13 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
20 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
21 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
22 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
60 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
64 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
65 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
74 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
80 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
81 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
84 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
86 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
88 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
89 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
119 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
123 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
126 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
127 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
128 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
129 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
130 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
131 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
139 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
143 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
144 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
145 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
146 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
147 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
148 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
149 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
150 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
151 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
156 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
157 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
163 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
164 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
165 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
166 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
169 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
170 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
171 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
172 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
173 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
177 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
178 2738541278 Niastella sp. CF465 Isolate Unclassified
179 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
180 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
181 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
182 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
183 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
184 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
185 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
186 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
187 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
188 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
189 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
190 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
191 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
192 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
193 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
194 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
195 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
196 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
197 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified
198 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
199 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.5
Metatranscriptomes 0
Isolates 8.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.09
Nodule 0
Rhizoplane 0.29
Rhizosphere 76.83
Stem 0
Stem Tuber 0
Unclassified 4.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10088540 3300009545 Bacteria 3085
2 JGI24740J21852_10001930 3300001979 Bacteria 9494
3 JGI24740J21852_10016008 3300001979 Bacteria 2722
4 JGI24735J21928_10000012 3300002067 Bacteria 208921
5 JGI25162J39368_1000486 3300002737 Bacteria 30351
6 JGI25154J39366_1000014 3300002738 Bacteria 265287
7 JGI25165J46597_1000588 3300003214 Bacteria 31654
8 JGI25153J46596_10000602 3300003215 Bacteria 22031
9 JGI25153J46596_10006021 3300003215 Bacteria 6234
10 rootH1_10046701 3300003316 Bacteria 11891
11 rootH2_10013605 3300003320 Bacteria 52813
12 rootH2_10028804 3300003320 Bacteria 14773
13 rootH2_10132073 3300003320 Bacteria 4422
14 rootH2_10152465 3300003320 Bacteria 5816
15 rootL2_10016854 3300003322 Bacteria 7983
16 rootL2_10108830 3300003322 Unclassified 4481
17 rootL2_10178768 3300003322 Bacteria 2939
18 rootL2_10190470 3300003322 Bacteria 5764
19 rootH1_10006023 3300003323 Bacteria 26459
20 rootH1_10013427 3300003323 Bacteria 73378
21 rootH1_10021499 3300003323 Bacteria 5214
22 rootH1_10025136 3300003323 Bacteria 4249
23 rootH1_10028303 3300003323 Bacteria 5382
24 Ga0055535_1003129 3300003761 Bacteria 4967
25 Ga0055528_1001061 3300003790 Bacteria 18144
26 Ga0055531_10000139 3300003794 Bacteria 82993
27 Ga0065165_1000012 3300005262 Bacteria 303241
28 Ga0065712_10069261 3300005290 Bacteria 7647
29 Ga0070676_10000908 3300005328 Bacteria 14664
30 Ga0070676_10018385 3300005328 Bacteria 3873
31 Ga0070680_100001939 3300005336 Bacteria 15210
32 Ga0070682_100000054 3300005337 Bacteria 112635
33 Ga0070682_100000324 3300005337 Bacteria 32747
34 Ga0070682_100016716 3300005337 Bacteria 4270
35 Ga0068868_100001751 3300005338 Bacteria 14876
36 Ga0070660_100007121 3300005339 Bacteria 7774
37 Ga0070689_100059316 3300005340 Bacteria 2974
38 Ga0070689_100093296 3300005340 Unclassified 2376
39 Ga0070668_100009954 3300005347 Bacteria 7042
40 Ga0070668_100025046 3300005347 Bacteria 4522
41 Ga0070669_100001433 3300005353 Bacteria 17250
42 Ga0070675_100026582 3300005354 Bacteria 4645
43 Ga0070673_100001998 3300005364 Bacteria 12304
44 Ga0070673_100011925 3300005364 Bacteria 5952
45 Ga0070659_100065746 3300005366 Bacteria 2872
46 Ga0070667_100060469 3300005367 Bacteria 3205
47 Ga0070667_100062699 3300005367 Bacteria 3149
48 Ga0070662_100028698 3300005457 Bacteria 3874
49 Ga0070681_10078610 3300005458 Unclassified 3255
50 Ga0068867_100007512 3300005459 Bacteria 7708
51 Ga0068867_100018934 3300005459 Bacteria 4900
52 Ga0068867_100019163 3300005459 Bacteria 4874
53 Ga0068867_100019480 3300005459 Unclassified 4834
54 Ga0070685_10007830 3300005466 Bacteria 5469
55 Ga0070698_100006171 3300005471 Bacteria 13052
56 Ga0070679_100000261 3300005530 Bacteria 44142
57 Ga0068853_100011917 3300005539 Bacteria 7071
58 Ga0070672_100049112 3300005543 Bacteria 3281
59 Ga0070665_100005824 3300005548 Bacteria 12641
60 Ga0070665_100077402 3300005548 Unclassified 3333
61 Ga0068855_100000127 3300005563 Bacteria 96826
62 Ga0068855_100002787 3300005563 Bacteria 21515
63 Ga0068856_100000021 3300005614 Bacteria 145017
64 Ga0068856_100071377 3300005614 Bacteria 3438
65 Ga0068852_100000982 3300005616 Bacteria 18761
66 Ga0068852_100004323 3300005616 Bacteria 10030
67 Ga0068859_100004048 3300005617 Bacteria 14943
68 Ga0068861_100040282 3300005719 Bacteria 3493
69 Ga0068870_10005637 3300005840 Bacteria 5476
70 Ga0068863_100043590 3300005841 Bacteria 4258
71 Ga0068860_100013771 3300005843 Bacteria 7929
72 Ga0068860_100032887 3300005843 Bacteria 4981
73 Ga0068860_100061483 3300005843 Bacteria 3568
74 Ga0068860_100070742 3300005843 Unclassified 3317
75 Ga0068862_100007369 3300005844 Bacteria 9127
76 Ga0075366_10002324 3300006195 Bacteria 9718
77 Ga0097621_100059840 3300006237 Bacteria 3120
78 Ga0075428_100004793 3300006844 Bacteria 14993
79 Ga0075428_100010058 3300006844 Bacteria 10510
80 Ga0075430_100071941 3300006846 Bacteria 2900
81 Ga0075431_100059328 3300006847 Bacteria 3949
82 Ga0075429_100003577 3300006880 Bacteria 13241
83 Ga0068865_100048790 3300006881 Bacteria 2915
84 Ga0097620_100004048 3300006931 Bacteria 14943
85 Ga0105240_10000104 3300009093 Bacteria 172082
86 Ga0105240_10000107 3300009093 Bacteria 171629
87 Ga0105240_10000180 3300009093 Bacteria 128683
88 Ga0105240_10002010 3300009093 Bacteria 33532
89 Ga0105240_10011891 3300009093 Bacteria 12076
90 Ga0105240_10019242 3300009093 Bacteria 9127
91 Ga0105240_10019985 3300009093 Bacteria 8941
92 Ga0105240_10020428 3300009093 Bacteria 8834
93 Ga0105240_10025377 3300009093 Bacteria 7789
94 Ga0105240_10122203 3300009093 Unclassified 3134
95 Ga0111539_10005159 3300009094 Bacteria 16933
96 Ga0105241_10017945 3300009174 Bacteria 5202
97 Ga0105241_10061964 3300009174 Bacteria 2882
98 Ga0105242_10026608 3300009176 Bacteria 4585
99 Ga0105237_10002459 3300009545 Bacteria 22992
100 Ga0105237_10005142 3300009545 Bacteria 14816
101 Ga0105237_10006204 3300009545 Bacteria 13331
102 Ga0105237_10009282 3300009545 Bacteria 10539
103 Ga0105237_10053697 3300009545 Bacteria 4041
104 Ga0105238_10001751 3300009551 Bacteria 21779
105 Ga0105249_10011264 3300009553 Bacteria 7851
106 Ga0105249_10024888 3300009553 Bacteria 5385
107 Ga0105239_10000002 3300010375 Bacteria 610298
108 Ga0105239_10000047 3300010375 Bacteria 179834
109 Ga0105239_10000267 3300010375 Bacteria 77181
110 Ga0105239_10000433 3300010375 Bacteria 61072
111 Ga0105239_10000585 3300010375 Bacteria 51936
112 Ga0105239_10002171 3300010375 Bacteria 25214
113 Ga0105239_10003346 3300010375 Bacteria 19705
114 Ga0105239_10007607 3300010375 Bacteria 12414
115 Ga0105239_10013556 3300010375 Bacteria 9050
116 Ga0157373_10005332 3300013100 Bacteria 9659
117 Ga0157373_10019314 3300013100 Bacteria 4963
118 Ga0157371_10000328 3300013102 Bacteria 61237
119 Ga0157371_10001565 3300013102 Bacteria 23529
120 Ga0157371_10002835 3300013102 Bacteria 16212
121 Ga0157371_10031113 3300013102 Bacteria 3845
122 Ga0157370_10000442 3300013104 Bacteria 51866
123 Ga0157370_10003744 3300013104 Bacteria 17775
124 Ga0157370_10057046 3300013104 Unclassified 3715
125 Ga0157369_10013373 3300013105 Bacteria 9283
126 Ga0157369_10090450 3300013105 Bacteria 3268
127 Ga0157374_10000003 3300013296 Bacteria 854471
128 Ga0157378_10000333 3300013297 Bacteria 46410
129 Ga0163162_10000241 3300013306 Bacteria 49773
130 Ga0163162_10002072 3300013306 Bacteria 18843
131 Ga0163162_10003251 3300013306 Bacteria 15537
132 Ga0157372_10000093 3300013307 Bacteria 91860
133 Ga0157372_10001217 3300013307 Bacteria 27846
134 Ga0157372_10001609 3300013307 Bacteria 24514
135 Ga0157372_10057130 3300013307 Bacteria 4362
136 Ga0157372_10132390 3300013307 Bacteria 2870
137 Ga0157372_10133348 3300013307 Bacteria 2859
138 Ga0157375_10033223 3300013308 Bacteria 4900
139 Ga0163163_10008353 3300014325 Bacteria 9195
140 Ga0163163_10057567 3300014325 Unclassified 3843
141 Ga0163163_10073537 3300014325 Bacteria 3409
142 Ga0157380_10001068 3300014326 Bacteria 17581
143 Ga0157380_10001169 3300014326 Bacteria 17017
144 Ga0157377_10002573 3300014745 Bacteria 8052
145 Ga0157377_10002617 3300014745 Bacteria 7986
146 Ga0182005_1000229 3300015265 Bacteria 36313
147 Ga0163161_10006542 3300017792 Bacteria 8066
148 Ga0207427_100043 3300025231 Bacteria 249595
149 Ga0209437_100008 3300025233 Bacteria 921142
150 Ga0209258_100156 3300025242 Bacteria 156926
151 Ga0209646_1000002 3300025246 Bacteria 1425781
152 Ga0209646_1000045 3300025246 Bacteria 333765
153 Ga0209026_1000075 3300025250 Bacteria 202874
154 Ga0209026_1000300 3300025250 Bacteria 53962
155 Ga0209026_1000625 3300025250 Bacteria 22243
156 Ga0209148_1000427 3300025254 Bacteria 46722
157 Ga0209233_1000366 3300025261 Bacteria 40794
158 Ga0209673_1000639 3300025273 Bacteria 52889
159 Ga0209564_1006746 3300025295 Bacteria 6093
160 Ga0209564_1011144 3300025295 Bacteria 4058
161 Ga0209758_1002488 3300025297 Bacteria 18730
162 Ga0209758_1002965 3300025297 Bacteria 16274
163 Ga0209758_1013661 3300025297 Bacteria 4401
164 Ga0209050_1001177 3300025298 Bacteria 30857
165 Ga0207426_1000159 3300025302 Bacteria 175899
166 Ga0207426_1000322 3300025302 Bacteria 91914
167 Ga0209257_1000025 3300025304 Bacteria 724838
168 Ga0209257_1002441 3300025304 Bacteria 18487
169 Ga0207688_10008272 3300025901 Bacteria 5654
170 Ga0207647_10000063 3300025904 Bacteria 83442
171 Ga0207647_10001274 3300025904 Bacteria 19392
172 Ga0207647_10005402 3300025904 Bacteria 9382
173 Ga0207645_10010074 3300025907 Bacteria 6508
174 Ga0207645_10013530 3300025907 Bacteria 5496
175 Ga0207645_10018614 3300025907 Bacteria 4564
176 Ga0207643_10007764 3300025908 Bacteria 5761
177 Ga0207707_10001259 3300025912 Bacteria 23715
178 Ga0207695_10000048 3300025913 Bacteria 421800
179 Ga0207695_10000077 3300025913 Bacteria 307107
180 Ga0207695_10000199 3300025913 Bacteria 166179
181 Ga0207695_10013338 3300025913 Bacteria 9807
182 Ga0207695_10023521 3300025913 Bacteria 6958
183 Ga0207695_10062417 3300025913 Bacteria 3847
184 Ga0207695_10089638 3300025913 Unclassified 3092
185 Ga0207671_10004412 3300025914 Bacteria 13479
186 Ga0207671_10006007 3300025914 Bacteria 10974
187 Ga0207671_10024325 3300025914 Bacteria 4556
188 Ga0207652_10000011 3300025921 Bacteria 246742
189 Ga0207681_10003565 3300025923 Bacteria 9694
190 Ga0207694_10015403 3300025924 Bacteria 5766
191 Ga0207690_10010096 3300025932 Bacteria 5608
192 Ga0207706_10005211 3300025933 Bacteria 12133
193 Ga0207706_10007608 3300025933 Bacteria 10025
194 Ga0207706_10075067 3300025933 Bacteria 2973
195 Ga0207686_10001642 3300025934 Bacteria 12487
196 Ga0207686_10009609 3300025934 Bacteria 5249
197 Ga0207670_10023439 3300025936 Bacteria 3843
198 Ga0207691_10022340 3300025940 Bacteria 5967
199 Ga0207689_10014384 3300025942 Bacteria 6731
200 Ga0207689_10015878 3300025942 Bacteria 6378
201 Ga0207667_10000171 3300025949 Bacteria 95554
202 Ga0207667_10001285 3300025949 Bacteria 31480
203 Ga0207667_10009381 3300025949 Bacteria 11531
204 Ga0207651_10005203 3300025960 Bacteria 6649
205 Ga0207712_10006776 3300025961 Bacteria 7224
206 Ga0207712_10032395 3300025961 Bacteria 3528
207 Ga0207658_10038969 3300025986 Bacteria 3427
208 Ga0207658_10055734 3300025986 Bacteria 2931
209 Ga0207677_10037621 3300026023 Bacteria 3164
210 Ga0207702_10000217 3300026078 Bacteria 67356
211 Ga0207702_10007685 3300026078 Bacteria 9165
212 Ga0207641_10001032 3300026088 Bacteria 28240
213 Ga0207641_10090187 3300026088 Bacteria 2680
214 Ga0207648_10002473 3300026089 Bacteria 19851
215 Ga0207648_10023423 3300026089 Bacteria 5531
216 Ga0207648_10027382 3300026089 Bacteria 5059
217 Ga0207648_10037180 3300026089 Bacteria 4287
218 Ga0207648_10052843 3300026089 Bacteria 3552
219 Ga0207676_10007181 3300026095 Bacteria 7885
220 Ga0207674_10001038 3300026116 Bacteria 36091
221 Ga0207674_10012614 3300026116 Bacteria 9445
222 Ga0207674_10025120 3300026116 Bacteria 6357
223 Ga0207675_100000654 3300026118 Bacteria 34117
224 Ga0207675_100008245 3300026118 Bacteria 9815
225 Ga0207675_100019290 3300026118 Bacteria 6362
226 Ga0207683_10001428 3300026121 Bacteria 21608
227 Ga0207698_10014071 3300026142 Bacteria 5304
228 Ga0207698_10058195 3300026142 Bacteria 2994
229 Ga0207428_10012137 3300027907 Bacteria 7581
230 Ga0268266_10006094 3300028379 Bacteria 11106
231 Ga0268265_10020824 3300028380 Bacteria 4583
232 Ga0268265_10031170 3300028380 Unclassified 3849
233 Ga0268264_10002250 3300028381 Bacteria 17084
234 Ga0268264_10072892 3300028381 Bacteria 2913
235 Ga0307517_10001130 3300028786 Bacteria 45094
236 Ga0307517_10041788 3300028786 Bacteria 4938
237 Ga0307515_10000001 3300028794 Bacteria 4259510
238 Ga0307515_10040566 3300028794 Bacteria 7355
239 Ga0265327_10000024 3300031251 Bacteria 382499
240 Ga0307509_10073926 3300031507 Bacteria 3548
241 Ga0307408_100002756 3300031548 Bacteria 12208
242 Ga0307408_100002822 3300031548 Bacteria 12049
243 Ga0307408_100011704 3300031548 Bacteria 5801
244 Ga0307516_10000232 3300031730 Bacteria 71483
245 Ga0307416_100000461 3300032002 Bacteria 20793
246 Ga0307414_10000001 3300032004 Bacteria 1352954
247 Ga0307414_10000021 3300032004 Bacteria 213521
248 Ga0307414_10000997 3300032004 Bacteria 14473
249 Ga0307414_10001186 3300032004 Bacteria 13386
250 Ga0307507_10012877 3300033179 Bacteria 10261
251 Ga0307510_10000416 3300033180 Bacteria 40773
252 Ga0307510_10001159 3300033180 Bacteria 28372
253 Ga0395899_0005151 3300037312 Bacteria 10169
254 Ga0395899_0009403 3300037312 Bacteria 7506
255 Ga0395900_0003816 3300037418 Bacteria 16111
256 Ga0395900_0028970 3300037418 Bacteria 5677
257 Ga0395900_0094635 3300037418 Bacteria 3069
258 Ga0395898_0005129 3300037466 Bacteria 14180
259 Ga0395898_0033592 3300037466 Bacteria 5117
260 Ga0395905_0001831 3300037471 Bacteria 24563
261 Ga0395901_0014835 3300038443 Bacteria 7916
262 Ga0395901_0019749 3300038443 Bacteria 6890
263 Ga0395901_0037897 3300038443 Bacteria 4985
264 Ga0436365_0081746 3300039437 Bacteria 17336
265 Ga0436365_1601764 3300039437 Bacteria 32491
266 Ga0439449_0002074 3300042007 Bacteria 7879
267 Ga0439457_000458 3300042014 Bacteria 11734
268 Ga0439457_003522 3300042014 Unclassified 4252
269 Ga0453684_0003756 3300044712 Bacteria 33560
270 Ga0453684_0022058 3300044712 Bacteria 9470
271 Ga0453684_0161314 3300044712 Bacteria 2652
272 Ga0495638_0000039 3300046460 Bacteria 247726
273 Ga0495650_0000349 3300046471 Bacteria 81735
274 Ga0495585_0000395 3300046492 Bacteria 42296
275 Ga0495585_0001200 3300046492 Bacteria 21074
276 Ga0495606_0047524 3300046507 Unclassified 2828
277 Ga0495610_0001218 3300046512 Bacteria 23142
278 Ga0495616_0000806 3300046513 Bacteria 22928
279 Ga0495630_0000620 3300046517 Bacteria 25717
280 Ga0495648_0015276 3300046524 Bacteria 5583
281 Ga0495633_0004347 3300046558 Bacteria 9047
282 Ga0495668_0000075 3300046616 Bacteria 163092
283 Ga0495625_0002634 3300046660 Bacteria 19161
284 Ga0495658_0051815 3300046683 Bacteria 2326
285 Ga0495636_0000074 3300047318 Bacteria 41551
286 Ga0495672_0020224 3300047320 Bacteria 4369
287 Ga0495672_0022311 3300047320 Unclassified 4118
288 Ga0495683_0012577 3300047323 Bacteria 4444
289 Ga0495687_000450 3300047443 Bacteria 50764
290 Ga0495673_0025197 3300047469 Bacteria 2860
291 Ga0495686_0000039 3300047472 Bacteria 304821
292 Ga0495686_0000309 3300047472 Bacteria 82637
293 Ga0495678_012083 3300049459 Bacteria 4104
294 Ga0501034_0117378 3300049571 Bacteria 2648
295 Ga0501047_0004310 3300049581 Bacteria 13391
296 Ga0501047_0015289 3300049581 Bacteria 7311
297 Ga0501047_0033847 3300049581 Bacteria 4932
298 Ga0501223_000320 3300049663 Bacteria 11955
299 Ga0501249_000083 3300049679 Bacteria 30517
300 Ga0501259_000184 3300049688 Bacteria 9470
301 Ga0501225_0000665 3300049705 Bacteria 10702
302 Ga0501280_000046 3300049776 Bacteria 36972
303 Ga0501044_0053159 3300049823 Bacteria 4168
304 nmdc:mga0k408_9141_c1 3300050493 Bacteria 5339
305 nmdc:mga08y16_16036_c1 3300050511 Bacteria 7876
306 nmdc:mga08y16_50502_c1 3300050511 Unclassified 4352
307 Ga0500646_0001340 3300053090 Bacteria 6532
308 Ga0500569_002156 3300053109 Bacteria 3834
309 Ga0500618_000015 3300053125 Bacteria 175864
310 Ga0500577_0000531 3300053142 Bacteria 9852
311 Ga0500616_0000037 3300053153 Bacteria 390473
312 Ga0501084_0026442 3300054114 Bacteria 4843
313 2520879181 2519899754 Bacteria 5336938
314 2599477930 2599185184 Bacteria 6430550
315 2738726010 2738541278 Bacteria 9755573
316 2738727239 2738541278 Bacteria 9755573
317 2740061236 2739367874 Bacteria 4872888
318 2819575953 2818991442 Bacteria 8318214
319 2819679403 2818991460 Bacteria 7595395
320 2821138505 2821136567 Bacteria 8080116
321 2857618520 2857618242 Bacteria 5635925
322 2883068827 2883068021 Bacteria 6192739
323 2890738461 2890737413 Bacteria 4269751
324 2896088400 2896085136 Bacteria 6129793
325 2896110837 2896109856 Bacteria 7140722
326 2902049387 2902048731 Bacteria 4976191
327 2904469298 2904467357 Bacteria 8057758
328 2910247893 2910245624 Bacteria 6935613
329 2911143154 2911138879 Bacteria 5811561
330 2928079890 2928078545 Bacteria 6534839
331 2928147657 2928147474 Bacteria 6512076
332 2929923729 2929921140 Bacteria 8649150
333 2929923998 2929921140 Bacteria 8649150
334 2932083798 2932082852 Bacteria 6563563
335 3003234062 3003233435 Bacteria 4458031
336 8003153748 8003151029 Bacteria 8187759
337 8003157815 8003151029 Bacteria 8187759
338 8055592373 8055592153 Bacteria 5961247
339 8055593578 8055592153 Bacteria 5961247
340 8055593601 8055592153 Bacteria 5961247
341 8056441540 8056440228 Bacteria 4946504
342 Ga0105237_10088540
343 JGI24740J21852_10001930
344 JGI24740J21852_10016008
345 JGI24735J21928_10000012
346 JGI25162J39368_1000486
347 JGI25154J39366_1000014
348 JGI25165J46597_1000588
349 JGI25153J46596_10000602
350 JGI25153J46596_10006021
351 rootH1_10046701
352 rootH2_10013605
353 rootH2_10028804
354 rootH2_10132073
355 rootH2_10152465
356 rootL2_10016854
357 rootL2_10108830
358 rootL2_10178768
359 rootL2_10190470
360 rootH1_10006023
361 rootH1_10013427
362 rootH1_10021499
363 rootH1_10025136
364 rootH1_10028303
365 Ga0055535_1003129
366 Ga0055528_1001061
367 Ga0055531_10000139
368 Ga0065165_1000012
369 Ga0065712_10069261
370 Ga0070676_10000908
371 Ga0070676_10018385
372 Ga0070680_100001939
373 Ga0070682_100000054
374 Ga0070682_100000324
375 Ga0070682_100016716
376 Ga0068868_100001751
377 Ga0070660_100007121
378 Ga0070689_100059316
379 Ga0070689_100093296
380 Ga0070668_100009954
381 Ga0070668_100025046
382 Ga0070669_100001433
383 Ga0070675_100026582
384 Ga0070673_100001998
385 Ga0070673_100011925
386 Ga0070659_100065746
387 Ga0070667_100060469
388 Ga0070667_100062699
389 Ga0070662_100028698
390 Ga0070681_10078610
391 Ga0068867_100007512
392 Ga0068867_100018934
393 Ga0068867_100019163
394 Ga0068867_100019480
395 Ga0070685_10007830
396 Ga0070698_100006171
397 Ga0070679_100000261
398 Ga0068853_100011917
399 Ga0070672_100049112
400 Ga0070665_100005824
401 Ga0070665_100077402
402 Ga0068855_100000127
403 Ga0068855_100002787
404 Ga0068856_100000021
405 Ga0068856_100071377
406 Ga0068852_100000982
407 Ga0068852_100004323
408 Ga0068859_100004048
409 Ga0068861_100040282
410 Ga0068870_10005637
411 Ga0068863_100043590
412 Ga0068860_100013771
413 Ga0068860_100032887
414 Ga0068860_100061483
415 Ga0068860_100070742
416 Ga0068862_100007369
417 Ga0075366_10002324
418 Ga0097621_100059840
419 Ga0075428_100004793
420 Ga0075428_100010058
421 Ga0075430_100071941
422 Ga0075431_100059328
423 Ga0075429_100003577
424 Ga0068865_100048790
425 Ga0097620_100004048
426 Ga0105240_10000104
427 Ga0105240_10000107
428 Ga0105240_10000180
429 Ga0105240_10002010
430 Ga0105240_10011891
431 Ga0105240_10019242
432 Ga0105240_10019985
433 Ga0105240_10020428
434 Ga0105240_10025377
435 Ga0105240_10122203
436 Ga0111539_10005159
437 Ga0105241_10017945
438 Ga0105241_10061964
439 Ga0105242_10026608
440 Ga0105237_10002459
441 Ga0105237_10005142
442 Ga0105237_10006204
443 Ga0105237_10009282
444 Ga0105237_10053697
445 Ga0105238_10001751
446 Ga0105249_10011264
447 Ga0105249_10024888
448 Ga0105239_10000002
449 Ga0105239_10000047
450 Ga0105239_10000267
451 Ga0105239_10000433
452 Ga0105239_10000585
453 Ga0105239_10002171
454 Ga0105239_10003346
455 Ga0105239_10007607
456 Ga0105239_10013556
457 Ga0157373_10005332
458 Ga0157373_10019314
459 Ga0157371_10000328
460 Ga0157371_10001565
461 Ga0157371_10002835
462 Ga0157371_10031113
463 Ga0157370_10000442
464 Ga0157370_10003744
465 Ga0157370_10057046
466 Ga0157369_10013373
467 Ga0157369_10090450
468 Ga0157374_10000003
469 Ga0157378_10000333
470 Ga0163162_10000241
471 Ga0163162_10002072
472 Ga0163162_10003251
473 Ga0157372_10000093
474 Ga0157372_10001217
475 Ga0157372_10001609
476 Ga0157372_10057130
477 Ga0157372_10132390
478 Ga0157372_10133348
479 Ga0157375_10033223
480 Ga0163163_10008353
481 Ga0163163_10057567
482 Ga0163163_10073537
483 Ga0157380_10001068
484 Ga0157380_10001169
485 Ga0157377_10002573
486 Ga0157377_10002617
487 Ga0182005_1000229
488 Ga0163161_10006542
489 Ga0207427_100043
490 Ga0209437_100008
491 Ga0209258_100156
492 Ga0209646_1000002
493 Ga0209646_1000045
494 Ga0209026_1000075
495 Ga0209026_1000300
496 Ga0209026_1000625
497 Ga0209148_1000427
498 Ga0209233_1000366
499 Ga0209673_1000639
500 Ga0209564_1006746
501 Ga0209564_1011144
502 Ga0209758_1002488
503 Ga0209758_1002965
504 Ga0209758_1013661
505 Ga0209050_1001177
506 Ga0207426_1000159
507 Ga0207426_1000322
508 Ga0209257_1000025
509 Ga0209257_1002441
510 Ga0207688_10008272
511 Ga0207647_10000063
512 Ga0207647_10001274
513 Ga0207647_10005402
514 Ga0207645_10010074
515 Ga0207645_10013530
516 Ga0207645_10018614
517 Ga0207643_10007764
518 Ga0207707_10001259
519 Ga0207695_10000048
520 Ga0207695_10000077
521 Ga0207695_10000199
522 Ga0207695_10013338
523 Ga0207695_10023521
524 Ga0207695_10062417
525 Ga0207695_10089638
526 Ga0207671_10004412
527 Ga0207671_10006007
528 Ga0207671_10024325
529 Ga0207652_10000011
530 Ga0207681_10003565
531 Ga0207694_10015403
532 Ga0207690_10010096
533 Ga0207706_10005211
534 Ga0207706_10007608
535 Ga0207706_10075067
536 Ga0207686_10001642
537 Ga0207686_10009609
538 Ga0207670_10023439
539 Ga0207691_10022340
540 Ga0207689_10014384
541 Ga0207689_10015878
542 Ga0207667_10000171
543 Ga0207667_10001285
544 Ga0207667_10009381
545 Ga0207651_10005203
546 Ga0207712_10006776
547 Ga0207712_10032395
548 Ga0207658_10038969
549 Ga0207658_10055734
550 Ga0207677_10037621
551 Ga0207702_10000217
552 Ga0207702_10007685
553 Ga0207641_10001032
554 Ga0207641_10090187
555 Ga0207648_10002473
556 Ga0207648_10023423
557 Ga0207648_10027382
558 Ga0207648_10037180
559 Ga0207648_10052843
560 Ga0207676_10007181
561 Ga0207674_10001038
562 Ga0207674_10012614
563 Ga0207674_10025120
564 Ga0207675_100000654
565 Ga0207675_100008245
566 Ga0207675_100019290
567 Ga0207683_10001428
568 Ga0207698_10014071
569 Ga0207698_10058195
570 Ga0207428_10012137
571 Ga0268266_10006094
572 Ga0268265_10020824
573 Ga0268265_10031170
574 Ga0268264_10002250
575 Ga0268264_10072892
576 Ga0307517_10001130
577 Ga0307517_10041788
578 Ga0307515_10000001
579 Ga0307515_10040566
580 Ga0265327_10000024
581 Ga0307509_10073926
582 Ga0307408_100002756
583 Ga0307408_100002822
584 Ga0307408_100011704
585 Ga0307516_10000232
586 Ga0307416_100000461
587 Ga0307414_10000001
588 Ga0307414_10000021
589 Ga0307414_10000997
590 Ga0307414_10001186
591 Ga0307507_10012877
592 Ga0307510_10000416
593 Ga0307510_10001159
594 Ga0395899_0005151
595 Ga0395899_0009403
596 Ga0395900_0003816
597 Ga0395900_0028970
598 Ga0395900_0094635
599 Ga0395898_0005129
600 Ga0395898_0033592
601 Ga0395905_0001831
602 Ga0395901_0014835
603 Ga0395901_0019749
604 Ga0395901_0037897
605 Ga0436365_0081746
606 Ga0436365_1601764
607 Ga0439449_0002074
608 Ga0439457_000458
609 Ga0439457_003522
610 Ga0453684_0003756
611 Ga0453684_0022058
612 Ga0453684_0161314
613 Ga0495638_0000039
614 Ga0495650_0000349
615 Ga0495585_0000395
616 Ga0495585_0001200
617 Ga0495606_0047524
618 Ga0495610_0001218
619 Ga0495616_0000806
620 Ga0495630_0000620
621 Ga0495648_0015276
622 Ga0495633_0004347
623 Ga0495668_0000075
624 Ga0495625_0002634
625 Ga0495658_0051815
626 Ga0495636_0000074
627 Ga0495672_0020224
628 Ga0495672_0022311
629 Ga0495683_0012577
630 Ga0495687_000450
631 Ga0495673_0025197
632 Ga0495686_0000039
633 Ga0495686_0000309
634 Ga0495678_012083
635 Ga0501034_0117378
636 Ga0501047_0004310
637 Ga0501047_0015289
638 Ga0501047_0033847
639 Ga0501223_000320
640 Ga0501249_000083
641 Ga0501259_000184
642 Ga0501225_0000665
643 Ga0501280_000046
644 Ga0501044_0053159
645 nmdc:mga0k408_9141_c1
646 nmdc:mga08y16_16036_c1
647 nmdc:mga08y16_50502_c1
648 Ga0500646_0001340
649 Ga0500569_002156
650 Ga0500618_000015
651 Ga0500577_0000531
652 Ga0500616_0000037
653 Ga0501084_0026442
654 2520879181
655 2599477930
656 2738726010
657 2738727239
658 2740061236
659 2819575953
660 2819679403
661 2821138505
662 2857618520
663 2883068827
664 2890738461
665 2896088400
666 2896110837
667 2902049387
668 2904469298
669 2910247893
670 2911143154
671 2928079890
672 2928147657
673 2929923729
674 2929923998
675 2932083798
676 3003234062
677 8003153748
678 8003157815
679 8055592373
680 8055593578
681 8055593601
682 8056441540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07715

Plug

TonB-dependent Receptor Plug Domain

184

294

0.94

PF00593

TonB_dep_Rec_b-barrel

TonB dependent receptor-like, beta-barrel

369

747

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.8889 123 718
5fp2-assembly1.cif.gz_A crystal structure of the siderophore receptor pira from pseudomonas aeruginosa 0.877 123 718
1nqf-assembly1.cif.gz_A outer membrane cobalamin transporter (btub) from e. coli, methionine substiution construct for se-met sad phasing 0.8738 119 718
3rgm-assembly1.cif.gz_A crystal structure of spin-labeled btub t156r1 0.8689 119 718
3rgn-assembly1.cif.gz_A crystal structure of spin-labeled btub w371r1 0.8654 121 718
ID Description Score Start End Superfamily
af_Q9JHW1_1212_1304_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8756 22 98 2.60.40.1120
af_B7Z0Z5_381_464_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8428 22 97 2.60.40.1120
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8382 232 718 2.40.170.20
3rgnA02 Mainly Beta;Beta Barrel;Maltoporin; Chain A;TonB-dependent receptor, beta-barrel domain 0.8367 232 718 2.40.170.20
af_E7FFQ7_717_794_2.60.40.1120 Mainly Beta;Sandwich;Immunoglobulin-like;Carboxypeptidase-like, regulatory domain 0.8353 22 97 2.60.40.1120
ID Description Score Start End GO Terms
AF-A0A367ZKQ1-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8841 19 98
AF-A0A1Y4CA58-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8781 15 97 GO:0030246
AF-A0A7X8CN92-F1-model_v4 Carboxypeptidase-like regulatory domain-containing protein 0.8692 19 99 GO:0004180
GO:0030246
AF-A0A7J3XDY8-F1-model_v4 Carboxypeptidase regulatory-like domain-containing protein 0.8689 21 98
AF-A0A2N2U0K8-F1-model_v4 TonB-dependent receptor 0.8666 106 469 GO:0009279
GO:0015889

Map