F414784

General Info

Members Datasets Scaffolds Average Seq Length
341 215 682 377

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10005343|Ga0265338_100053432
Length 436
Sequence MKVPLRGLLAGMGMADVRFLRSARPELARDNDRGQAGAGTLAAKTAATYNWSTEHEPRDDAMNDKKLNVAIIGLGFGAEFIPIYQRHPQANMLSICQRSADKLKQVGDAFGIERRYTRYDDVLADRDVDFVHINTPIPDHAPQAIAALKAGKHVMCTVPMATSIEDCEQIVKLAKETGLKYMMAETVVYAREFLFVKELYEKGELGKVQFLQASHQQDMDGWPNYWPGLPPMHYATHCVGPCLALTKAEAEYVSCFGSGTIREELIGKYHSPFAVETTHIKFRNSDLTARIHRSLFDTARQYRESFDVYGTKKAFEWPLIEGEEPVIHTAKKPEPEIPERVKVPDYAHRLPEPIRRFTMGGVYDAGEHAHLSFVQGGGHGGSHPHLAHEFVSALIAGRDPYPNAVQSANWTCVGICAHQSALNGGEIVRLPAFTLS

Samples

Sample ID Description Type Environment
1 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
14 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
96 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
97 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
98 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
101 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
102 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
103 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
104 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
105 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
106 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
107 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
108 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
113 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
116 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
117 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
118 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
123 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
124 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
125 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
126 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
129 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
130 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
136 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
137 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
138 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
143 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
144 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
151 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
152 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
153 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
163 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
164 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
165 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
166 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
167 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
168 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
169 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
170 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
171 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
172 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
173 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
174 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
175 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
181 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
182 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
183 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
184 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
187 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
188 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
189 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
190 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
191 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
192 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
196 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
197 2523231067 Pleomorphomonas oryzae DSM 16300 Isolate Unclassified
198 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
199 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
200 2738541284 Pedobacter sp. YR016 Isolate Unclassified
201 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
202 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
203 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
204 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
205 2857472729 Cohnella sp. R-74144 Isolate Unclassified
206 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
207 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
208 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
209 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
210 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
211 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
212 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
213 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
214 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
215 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.26
Metatranscriptomes 0.59
Isolates 6.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.81
Nodule 0
Rhizoplane 1.17
Rhizosphere 90.03
Stem 0
Stem Tuber 0
Unclassified 3.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265338_10005343 3300028800 Bacteria 16800
2 SwRhRL2b_contig_2386185 2162886007 Bacteria 2646
3 Ga0055536_1002667 3300003781 Bacteria 9898
4 Ga0055531_10001170 3300003794 Bacteria 20191
5 Ga0065165_1000458 3300005262 Bacteria 63926
6 Ga0065714_10002601 3300005288 Bacteria 15513
7 Ga0065714_10004183 3300005288 Bacteria 9254
8 Ga0065704_10000224 3300005289 Bacteria 74956
9 Ga0065704_10073924 3300005289 Bacteria 6664
10 Ga0065704_10076160 3300005289 Bacteria 5239
11 Ga0065704_10080529 3300005289 Bacteria 3930
12 Ga0065712_10071212 3300005290 Bacteria 5413
13 Ga0065712_10079684 3300005290 Bacteria 3191
14 Ga0065712_10108578 3300005290 Bacteria 1872
15 Ga0065707_10000773 3300005295 Bacteria 15229
16 Ga0070658_10011809 3300005327 Bacteria 7009
17 Ga0070658_10020985 3300005327 Bacteria 5233
18 Ga0070676_10147200 3300005328 Bacteria 1504
19 Ga0070670_100025197 3300005331 Bacteria 5119
20 Ga0070677_10012876 3300005333 Bacteria 2912
21 Ga0068869_100064990 3300005334 Bacteria 2685
22 Ga0068869_100098180 3300005334 Unclassified 2212
23 Ga0070689_100101118 3300005340 Bacteria 2281
24 Ga0070668_100012201 3300005347 Bacteria 6401
25 Ga0070669_100227381 3300005353 Unclassified 1477
26 Ga0070675_100007704 3300005354 Bacteria 8336
27 Ga0070675_100150219 3300005354 Bacteria 1997
28 Ga0070675_100221625 3300005354 Bacteria 1647
29 Ga0070674_100047396 3300005356 Bacteria 2944
30 Ga0070673_100056412 3300005364 Bacteria 3099
31 Ga0070673_100185939 3300005364 Unclassified 1781
32 Ga0070667_100010872 3300005367 Bacteria 7527
33 Ga0070667_100013684 3300005367 Bacteria 6705
34 Ga0070703_10031332 3300005406 Bacteria 1607
35 Ga0070714_100075169 3300005435 Bacteria 2931
36 Ga0070705_100045174 3300005440 Bacteria 2533
37 Ga0070694_100041291 3300005444 Bacteria 3077
38 Ga0070708_100207425 3300005445 Bacteria 1836
39 Ga0070678_100016822 3300005456 Bacteria 4689
40 Ga0068867_100011130 3300005459 Bacteria 6345
41 Ga0070685_10015993 3300005466 Bacteria 3991
42 Ga0068853_100000003 3300005539 Bacteria 434636
43 Ga0068853_100070751 3300005539 Bacteria 3037
44 Ga0070672_100018026 3300005543 Bacteria 5096
45 Ga0070686_100003959 3300005544 Bacteria 8147
46 Ga0070686_100022272 3300005544 Bacteria 3772
47 Ga0070686_100169303 3300005544 Bacteria 1544
48 Ga0070686_100206383 3300005544 Unclassified 1412
49 Ga0070696_100055251 3300005546 Bacteria 2768
50 Ga0068855_100003035 3300005563 Bacteria 20552
51 Ga0068857_100008237 3300005577 Bacteria 9008
52 Ga0068857_100010645 3300005577 Bacteria 7999
53 Ga0068857_100017844 3300005577 Bacteria 6223
54 Ga0068857_100100264 3300005577 Bacteria 2598
55 Ga0068861_100012339 3300005719 Bacteria 5957
56 Ga0068860_100046706 3300005843 Bacteria 4129
57 Ga0068860_100052631 3300005843 Bacteria 3872
58 Ga0068862_100035386 3300005844 Unclassified 4229
59 Ga0081455_10000482 3300005937 Bacteria 51729
60 Ga0097621_100029123 3300006237 Bacteria 4359
61 Ga0068871_100031967 3300006358 Bacteria 4152
62 Ga0075428_100006590 3300006844 Bacteria 12916
63 Ga0075428_100007362 3300006844 Bacteria 12200
64 Ga0075428_100199643 3300006844 Bacteria 2163
65 Ga0075428_100351844 3300006844 Bacteria 1581
66 Ga0075431_100027821 3300006847 Bacteria 5803
67 Ga0075434_100312862 3300006871 Bacteria 1591
68 Ga0075429_100044506 3300006880 Bacteria 3861
69 Ga0075429_100230857 3300006880 Bacteria 1621
70 Ga0068865_100024182 3300006881 Bacteria 3983
71 Ga0068865_100073521 3300006881 Unclassified 2431
72 Ga0068865_100105907 3300006881 Bacteria 2067
73 Ga0105240_10000021 3300009093 Bacteria 394304
74 Ga0105240_10000070 3300009093 Bacteria 204666
75 Ga0105240_10274658 3300009093 Bacteria 1939
76 Ga0111539_10006957 3300009094 Bacteria 14517
77 Ga0111539_10020855 3300009094 Bacteria 8068
78 Ga0111539_10037334 3300009094 Bacteria 5867
79 Ga0111539_10045775 3300009094 Bacteria 5236
80 Ga0111539_10050215 3300009094 Bacteria 4969
81 Ga0111539_10074100 3300009094 Bacteria 4012
82 Ga0111539_10133893 3300009094 Bacteria 2902
83 Ga0111539_10580520 3300009094 Bacteria 1305
84 Ga0105247_10001055 3300009101 Bacteria 20666
85 Ga0114129_10042674 3300009147 Bacteria 6384
86 Ga0105241_10302539 3300009174 Bacteria 1373
87 Ga0105242_10019324 3300009176 Bacteria 5337
88 Ga0105242_10185309 3300009176 Bacteria 1839
89 Ga0105242_10213246 3300009176 Bacteria 1722
90 Ga0105242_10388714 3300009176 Bacteria 1299
91 Ga0105248_10384026 3300009177 Bacteria 1581
92 Ga0105237_10002055 3300009545 Bacteria 25558
93 Ga0105237_10328734 3300009545 Bacteria 1533
94 Ga0105238_10000112 3300009551 Bacteria 89923
95 Ga0105238_10001007 3300009551 Bacteria 28742
96 Ga0105238_10119939 3300009551 Bacteria 2610
97 Ga0105239_10018967 3300010375 Bacteria 7603
98 Ga0105239_10026838 3300010375 Bacteria 6339
99 Ga0105246_10020029 3300011119 Bacteria 4288
100 Ga0157373_10000180 3300013100 Bacteria 51917
101 Ga0157373_10002113 3300013100 Bacteria 15040
102 Ga0157373_10003188 3300013100 Bacteria 12404
103 Ga0157373_10128881 3300013100 Bacteria 1779
104 Ga0157371_10000222 3300013102 Bacteria 82860
105 Ga0157371_10004004 3300013102 Bacteria 13053
106 Ga0157371_10026678 3300013102 Bacteria 4195
107 Ga0157371_10059370 3300013102 Bacteria 2711
108 Ga0157371_10070692 3300013102 Bacteria 2471
109 Ga0157370_10000643 3300013104 Bacteria 43469
110 Ga0157370_10031138 3300013104 Bacteria 5221
111 Ga0157370_10088637 3300013104 Bacteria 2906
112 Ga0157370_10217648 3300013104 Bacteria 1769
113 Ga0157378_10275744 3300013297 Bacteria 1619
114 Ga0163162_10287904 3300013306 Bacteria 1775
115 Ga0163162_10288066 3300013306 Bacteria 1774
116 Ga0157372_10000056 3300013307 Bacteria 125982
117 Ga0157372_10281217 3300013307 Bacteria 1935
118 Ga0163163_10034139 3300014325 Bacteria 4925
119 Ga0163163_10240132 3300014325 Bacteria 1861
120 Ga0157380_10001529 3300014326 Bacteria 15204
121 Ga0157380_10025831 3300014326 Bacteria 4457
122 Ga0182008_10000006 3300014497 Bacteria 378521
123 Ga0209676_1000481 3300025292 Bacteria 65739
124 Ga0207426_1000105 3300025302 Bacteria 247269
125 Ga0209257_1000023 3300025304 Bacteria 753019
126 Ga0207692_10053133 3300025898 Bacteria 2062
127 Ga0207710_10004828 3300025900 Bacteria 5849
128 Ga0207705_10028169 3300025909 Bacteria 4005
129 Ga0207695_10000083 3300025913 Bacteria 284102
130 Ga0207695_10000155 3300025913 Bacteria 204627
131 Ga0207662_10090001 3300025918 Bacteria 1886
132 Ga0207681_10042130 3300025923 Bacteria 3048
133 Ga0207694_10001693 3300025924 Bacteria 18477
134 Ga0207650_10029244 3300025925 Bacteria 3960
135 Ga0207650_10128614 3300025925 Bacteria 1980
136 Ga0207650_10179338 3300025925 Bacteria 1687
137 Ga0207659_10007480 3300025926 Bacteria 6720
138 Ga0207664_10236676 3300025929 Bacteria 1589
139 Ga0207670_10015133 3300025936 Bacteria 4600
140 Ga0207670_10070122 3300025936 Bacteria 2420
141 Ga0207691_10036396 3300025940 Bacteria 4560
142 Ga0207689_10002126 3300025942 Bacteria 18634
143 Ga0207689_10011244 3300025942 Bacteria 7683
144 Ga0207689_10076846 3300025942 Bacteria 2745
145 Ga0207712_10012211 3300025961 Bacteria 5488
146 Ga0207658_10023950 3300025986 Unclassified 4266
147 Ga0207658_10036563 3300025986 Bacteria 3521
148 Ga0207639_10000002 3300026041 Bacteria 903066
149 Ga0207639_10084801 3300026041 Unclassified 2518
150 Ga0207639_10092785 3300026041 Bacteria 2420
151 Ga0207648_10004189 3300026089 Bacteria 14904
152 Ga0207648_10026894 3300026089 Bacteria 5109
153 Ga0207676_10024921 3300026095 Bacteria 4434
154 Ga0207674_10005310 3300026116 Bacteria 15326
155 Ga0207674_10013568 3300026116 Bacteria 9030
156 Ga0207674_10025884 3300026116 Bacteria 6245
157 Ga0207674_10050221 3300026116 Bacteria 4262
158 Ga0207675_100032513 3300026118 Bacteria 4859
159 Ga0207683_10022749 3300026121 Bacteria 5384
160 Ga0207683_10108791 3300026121 Bacteria 2480
161 Ga0207698_10086920 3300026142 Bacteria 2544
162 Ga0207698_10204342 3300026142 Bacteria 1772
163 Ga0207428_10036766 3300027907 Bacteria 3990
164 Ga0268265_10080573 3300028380 Bacteria 2568
165 Ga0268264_10028053 3300028381 Bacteria 4605
166 Ga0268264_10032736 3300028381 Bacteria 4266
167 Ga0268264_10099969 3300028381 Bacteria 2518
168 Ga0265334_10065184 3300028573 Bacteria 1366
169 Ga0265318_10000753 3300028577 Bacteria 21576
170 Ga0265323_10027685 3300028653 Bacteria 2128
171 Ga0265336_10034115 3300028666 Bacteria 1574
172 Ga0307515_10090640 3300028794 Unclassified 3832
173 Ga0307515_10135489 3300028794 Bacteria 2681
174 Ga0265338_10020440 3300028800 Bacteria 6963
175 Ga0265338_10031993 3300028800 Bacteria 5143
176 Ga0265338_10162724 3300028800 Bacteria 1721
177 Ga0265324_10017634 3300029957 Bacteria 2596
178 Ga0265330_10007163 3300031235 Bacteria 5463
179 Ga0265332_10014632 3300031238 Bacteria 3470
180 Ga0265328_10005939 3300031239 Bacteria 5207
181 Ga0265325_10001477 3300031241 Bacteria 16563
182 Ga0265325_10003034 3300031241 Bacteria 11117
183 Ga0265329_10003747 3300031242 Bacteria 6543
184 Ga0265329_10009895 3300031242 Bacteria 3529
185 Ga0265340_10054851 3300031247 Bacteria 1921
186 Ga0265339_10000301 3300031249 Bacteria 40356
187 Ga0265331_10000434 3300031250 Bacteria 41254
188 Ga0265327_10001647 3300031251 Bacteria 26957
189 Ga0265327_10001676 3300031251 Bacteria 26576
190 Ga0265316_10036733 3300031344 Bacteria 3960
191 Ga0307408_100000224 3300031548 Bacteria 60167
192 Ga0307408_100058913 3300031548 Bacteria 2794
193 Ga0265313_10000783 3300031595 Bacteria 32144
194 Ga0307508_10000131 3300031616 Bacteria 88984
195 Ga0265314_10000302 3300031711 Bacteria 70785
196 Ga0265314_10000389 3300031711 Bacteria 59681
197 Ga0265314_10002260 3300031711 Bacteria 19946
198 Ga0265314_10005854 3300031711 Bacteria 11006
199 Ga0265314_10161009 3300031711 Bacteria 1366
200 Ga0265342_10005983 3300031712 Bacteria 9146
201 Ga0265342_10104335 3300031712 Bacteria 1611
202 Ga0316576_10096293 3300031727 Bacteria 2209
203 Ga0307405_10169425 3300031731 Unclassified 1556
204 Ga0307413_10038022 3300031824 Bacteria 2786
205 Ga0307410_10186710 3300031852 Bacteria 1574
206 Ga0307406_10023791 3300031901 Bacteria 3650
207 Ga0307412_10000029 3300031911 Bacteria 209074
208 Ga0307412_10176898 3300031911 Bacteria 1601
209 Ga0307416_100004275 3300032002 Bacteria 8578
210 Ga0307414_10000351 3300032004 Bacteria 25745
211 Ga0307414_10002519 3300032004 Bacteria 9612
212 Ga0307414_10029781 3300032004 Bacteria 3557
213 Ga0307414_10029782 3300032004 Bacteria 3557
214 Ga0307414_10091232 3300032004 Bacteria 2264
215 Ga0307414_10102860 3300032004 Bacteria 2154
216 Ga0307411_10269096 3300032005 Bacteria 1350
217 Ga0373945_0017222 3300035116 Bacteria 2446
218 Ga0373943_0057305 3300035170 Bacteria 1936
219 Ga0436365_0133752 3300039437 Bacteria 1623
220 Ga0439431_0006091 3300041997 Bacteria 2663
221 Ga0439445_0008602 3300042004 Bacteria 2391
222 Ga0451577_0001236 3300042876 Bacteria 35364
223 Ga0451577_0322946 3300042876 Bacteria 1400
224 Ga0453684_0026210 3300044712 Bacteria 8432
225 Ga0466970_0010505 3300044765 Bacteria 4702
226 Ga0451576_0041711 3300045051 Bacteria 4851
227 Ga0451576_0076509 3300045051 Bacteria 3483
228 Ga0451576_0220308 3300045051 Bacteria 1981
229 Ga0466967_0000303 3300045976 Bacteria 22157
230 Ga0495592_0000231 3300046454 Bacteria 48322
231 Ga0495603_0121913 3300046455 Bacteria 1519
232 Ga0495650_0030003 3300046471 Bacteria 2470
233 Ga0495662_0010850 3300046476 Bacteria 4456
234 Ga0495618_0003576 3300046514 Bacteria 9626
235 Ga0495618_0076261 3300046514 Bacteria 2136
236 Ga0495628_0000634 3300046516 Bacteria 32129
237 Ga0495628_0027208 3300046516 Bacteria 4656
238 Ga0495630_0003030 3300046517 Bacteria 11653
239 Ga0495630_0009889 3300046517 Bacteria 6870
240 Ga0495630_0130438 3300046517 Bacteria 1909
241 Ga0495630_0236322 3300046517 Bacteria 1396
242 Ga0495630_0345387 3300046517 Bacteria 1139
243 Ga0495666_0021594 3300046526 Bacteria 3187
244 Ga0495640_0002791 3300046533 Bacteria 14051
245 Ga0495586_0004238 3300046535 Bacteria 7672
246 Ga0495586_0085278 3300046535 Bacteria 1740
247 Ga0495645_0013067 3300046543 Bacteria 5866
248 Ga0495667_0006709 3300046559 Bacteria 7812
249 Ga0495625_0092766 3300046660 Bacteria 2086
250 Ga0495657_0046579 3300046675 Bacteria 2935
251 Ga0495599_0003061 3300046678 Bacteria 9729
252 Ga0495599_0017835 3300046678 Bacteria 4418
253 Ga0495674_0029983 3300047319 Bacteria 4949
254 Ga0495674_0108515 3300047319 Bacteria 2355
255 Ga0495684_0010827 3300047471 Bacteria 7051
256 Ga0495614_0032479 3300048089 Bacteria 2247
257 Ga0496103_0295628 3300048906 Bacteria 1042
258 Ga0496109_0169136 3300048912 Bacteria 2050
259 Ga0496115_0097586 3300048918 Bacteria 2406
260 Ga0501034_0001620 3300049571 Bacteria 29202
261 Ga0501034_0002601 3300049571 Bacteria 21444
262 Ga0501034_0010481 3300049571 Bacteria 9652
263 Ga0501034_0024874 3300049571 Bacteria 6092
264 Ga0501034_0043462 3300049571 Bacteria 4547
265 Ga0501034_0132346 3300049571 Bacteria 2477
266 Ga0501034_0140430 3300049571 Bacteria 2395
267 Ga0501034_0196854 3300049571 Bacteria 1975
268 Ga0501034_0227414 3300049571 Bacteria 1816
269 Ga0501038_0010078 3300049574 Bacteria 8652
270 Ga0501038_0103395 3300049574 Bacteria 2369
271 Ga0501039_0001694 3300049575 Bacteria 16256
272 Ga0501043_0018633 3300049579 Bacteria 5448
273 Ga0501046_0000012 3300049580 Bacteria 314417
274 Ga0501070_0052047 3300049586 Bacteria 3399
275 Ga0501077_0034172 3300049593 Bacteria 3236
276 Ga0501202_001960 3300049652 Bacteria 3394
277 Ga0501217_000031 3300049661 Bacteria 15253
278 Ga0501217_008804 3300049661 Bacteria 2187
279 Ga0501223_001544 3300049663 Bacteria 5306
280 Ga0501224_000385 3300049664 Bacteria 5243
281 Ga0501233_000745 3300049668 Bacteria 5405
282 Ga0501242_003565 3300049674 Bacteria 1689
283 Ga0501243_003378 3300049675 Bacteria 2361
284 Ga0501250_001845 3300049680 Bacteria 1830
285 Ga0501257_001269 3300049686 Bacteria 5189
286 Ga0501259_000697 3300049688 Bacteria 5420
287 Ga0501261_002989 3300049690 Bacteria 2076
288 Ga0501225_0005479 3300049705 Bacteria 3726
289 Ga0501225_0019021 3300049705 Bacteria 1901
290 Ga0501234_008355 3300049707 Bacteria 1616
291 Ga0501080_0069175 3300049742 Bacteria 3283
292 Ga0501081_0041223 3300049743 Bacteria 3161
293 Ga0501083_0066504 3300049744 Bacteria 2400
294 Ga0501044_0385045 3300049823 Bacteria 1317
295 Ga0501045_0283017 3300049824 Bacteria 1234
296 nmdc:mga03n38_23159_c1 3300050490 Bacteria 2523
297 nmdc:mga0k408_114196_c1 3300050493 Bacteria 1597
298 nmdc:mga06z11_81686_c1 3300050494 Bacteria 1735
299 nmdc:mga05p37_94755_c1 3300050507 Bacteria 3678
300 nmdc:mga09592_35631_c1 3300050508 Bacteria 4166
301 nmdc:mga09592_64303_c1 3300050508 Bacteria 3105
302 nmdc:mga09592_91940_c1 3300050508 Bacteria 2593
303 nmdc:mga06r32_7523_c1 3300050510 Bacteria 9800
304 nmdc:mga08y16_120894_c1 3300050511 Bacteria 2725
305 nmdc:mga08y16_166172_c1 3300050511 Bacteria 2292
306 nmdc:mga08y16_177396_c1 3300050511 Bacteria 2212
307 nmdc:mga08y16_25925_c1 3300050511 Bacteria 6185
308 nmdc:mga08y16_5616_c1 3300050511 Bacteria 13136
309 nmdc:mga08y16_924_c1 3300050511 Bacteria 28515
310 nmdc:mga08y16_93295_c1 3300050511 Bacteria 3136
311 nmdc:mga08y16_97842_c1 3300050511 Bacteria 3056
312 Ga0500635_0000006 3300053080 Bacteria 187108
313 Ga0500651_0000256 3300053093 Bacteria 32006
314 Ga0500616_0017348 3300053153 Bacteria 4084
315 Ga0500616_0028554 3300053153 Unclassified 3073
316 Ga0501084_0035874 3300054114 Bacteria 4145
317 Ga0587094_010535 3300059513 Bacteria 1201
318 Ga0587076_000298 3300059645 Bacteria 3725
319 Ga0501082_0097370 3300060353 Bacteria 2543
320 Ga0530510_0235714 3300061734 Bacteria 1362
321 2522549357 2522125168 Bacteria 7376607
322 2523466617 2523231067 Bacteria 5230452
323 2687237702 2684623219 Bacteria 8442773
324 2688392331 2687453341 Bacteria 6534136
325 2688393887 2687453341 Bacteria 6534136
326 2738760234 2738541284 Bacteria 5199923
327 2776612288 2775506987 Bacteria 5373360
328 2787436511 2786546517 Bacteria 6614109
329 2812325479 2811994872 Bacteria 4121241
330 2837274221 2837268691 Bacteria 7850704
331 2857476490 2857472729 Bacteria 6568124
332 2857738014 2857737099 Bacteria 3104305
333 2868092386 2868088558 Bacteria 7609351
334 2870724833 2870721527 Bacteria 9689237
335 2883068162 2883068021 Bacteria 6192739
336 2884635130 2884634485 Bacteria 3928637
337 2896090053 2896085136 Bacteria 6129793
338 2896111485 2896109856 Bacteria 7140722
339 2911141010 2911138879 Bacteria 5811561
340 2919695215 2919692658 Bacteria 5943958
341 8055177486 8055172936 Bacteria 9305943
342 Ga0265338_10005343
343 SwRhRL2b_contig_2386185
344 Ga0055536_1002667
345 Ga0055531_10001170
346 Ga0065165_1000458
347 Ga0065714_10002601
348 Ga0065714_10004183
349 Ga0065704_10000224
350 Ga0065704_10073924
351 Ga0065704_10076160
352 Ga0065704_10080529
353 Ga0065712_10071212
354 Ga0065712_10079684
355 Ga0065712_10108578
356 Ga0065707_10000773
357 Ga0070658_10011809
358 Ga0070658_10020985
359 Ga0070676_10147200
360 Ga0070670_100025197
361 Ga0070677_10012876
362 Ga0068869_100064990
363 Ga0068869_100098180
364 Ga0070689_100101118
365 Ga0070668_100012201
366 Ga0070669_100227381
367 Ga0070675_100007704
368 Ga0070675_100150219
369 Ga0070675_100221625
370 Ga0070674_100047396
371 Ga0070673_100056412
372 Ga0070673_100185939
373 Ga0070667_100010872
374 Ga0070667_100013684
375 Ga0070703_10031332
376 Ga0070714_100075169
377 Ga0070705_100045174
378 Ga0070694_100041291
379 Ga0070708_100207425
380 Ga0070678_100016822
381 Ga0068867_100011130
382 Ga0070685_10015993
383 Ga0068853_100000003
384 Ga0068853_100070751
385 Ga0070672_100018026
386 Ga0070686_100003959
387 Ga0070686_100022272
388 Ga0070686_100169303
389 Ga0070686_100206383
390 Ga0070696_100055251
391 Ga0068855_100003035
392 Ga0068857_100008237
393 Ga0068857_100010645
394 Ga0068857_100017844
395 Ga0068857_100100264
396 Ga0068861_100012339
397 Ga0068860_100046706
398 Ga0068860_100052631
399 Ga0068862_100035386
400 Ga0081455_10000482
401 Ga0097621_100029123
402 Ga0068871_100031967
403 Ga0075428_100006590
404 Ga0075428_100007362
405 Ga0075428_100199643
406 Ga0075428_100351844
407 Ga0075431_100027821
408 Ga0075434_100312862
409 Ga0075429_100044506
410 Ga0075429_100230857
411 Ga0068865_100024182
412 Ga0068865_100073521
413 Ga0068865_100105907
414 Ga0105240_10000021
415 Ga0105240_10000070
416 Ga0105240_10274658
417 Ga0111539_10006957
418 Ga0111539_10020855
419 Ga0111539_10037334
420 Ga0111539_10045775
421 Ga0111539_10050215
422 Ga0111539_10074100
423 Ga0111539_10133893
424 Ga0111539_10580520
425 Ga0105247_10001055
426 Ga0114129_10042674
427 Ga0105241_10302539
428 Ga0105242_10019324
429 Ga0105242_10185309
430 Ga0105242_10213246
431 Ga0105242_10388714
432 Ga0105248_10384026
433 Ga0105237_10002055
434 Ga0105237_10328734
435 Ga0105238_10000112
436 Ga0105238_10001007
437 Ga0105238_10119939
438 Ga0105239_10018967
439 Ga0105239_10026838
440 Ga0105246_10020029
441 Ga0157373_10000180
442 Ga0157373_10002113
443 Ga0157373_10003188
444 Ga0157373_10128881
445 Ga0157371_10000222
446 Ga0157371_10004004
447 Ga0157371_10026678
448 Ga0157371_10059370
449 Ga0157371_10070692
450 Ga0157370_10000643
451 Ga0157370_10031138
452 Ga0157370_10088637
453 Ga0157370_10217648
454 Ga0157378_10275744
455 Ga0163162_10287904
456 Ga0163162_10288066
457 Ga0157372_10000056
458 Ga0157372_10281217
459 Ga0163163_10034139
460 Ga0163163_10240132
461 Ga0157380_10001529
462 Ga0157380_10025831
463 Ga0182008_10000006
464 Ga0209676_1000481
465 Ga0207426_1000105
466 Ga0209257_1000023
467 Ga0207692_10053133
468 Ga0207710_10004828
469 Ga0207705_10028169
470 Ga0207695_10000083
471 Ga0207695_10000155
472 Ga0207662_10090001
473 Ga0207681_10042130
474 Ga0207694_10001693
475 Ga0207650_10029244
476 Ga0207650_10128614
477 Ga0207650_10179338
478 Ga0207659_10007480
479 Ga0207664_10236676
480 Ga0207670_10015133
481 Ga0207670_10070122
482 Ga0207691_10036396
483 Ga0207689_10002126
484 Ga0207689_10011244
485 Ga0207689_10076846
486 Ga0207712_10012211
487 Ga0207658_10023950
488 Ga0207658_10036563
489 Ga0207639_10000002
490 Ga0207639_10084801
491 Ga0207639_10092785
492 Ga0207648_10004189
493 Ga0207648_10026894
494 Ga0207676_10024921
495 Ga0207674_10005310
496 Ga0207674_10013568
497 Ga0207674_10025884
498 Ga0207674_10050221
499 Ga0207675_100032513
500 Ga0207683_10022749
501 Ga0207683_10108791
502 Ga0207698_10086920
503 Ga0207698_10204342
504 Ga0207428_10036766
505 Ga0268265_10080573
506 Ga0268264_10028053
507 Ga0268264_10032736
508 Ga0268264_10099969
509 Ga0265334_10065184
510 Ga0265318_10000753
511 Ga0265323_10027685
512 Ga0265336_10034115
513 Ga0307515_10090640
514 Ga0307515_10135489
515 Ga0265338_10020440
516 Ga0265338_10031993
517 Ga0265338_10162724
518 Ga0265324_10017634
519 Ga0265330_10007163
520 Ga0265332_10014632
521 Ga0265328_10005939
522 Ga0265325_10001477
523 Ga0265325_10003034
524 Ga0265329_10003747
525 Ga0265329_10009895
526 Ga0265340_10054851
527 Ga0265339_10000301
528 Ga0265331_10000434
529 Ga0265327_10001647
530 Ga0265327_10001676
531 Ga0265316_10036733
532 Ga0307408_100000224
533 Ga0307408_100058913
534 Ga0265313_10000783
535 Ga0307508_10000131
536 Ga0265314_10000302
537 Ga0265314_10000389
538 Ga0265314_10002260
539 Ga0265314_10005854
540 Ga0265314_10161009
541 Ga0265342_10005983
542 Ga0265342_10104335
543 Ga0316576_10096293
544 Ga0307405_10169425
545 Ga0307413_10038022
546 Ga0307410_10186710
547 Ga0307406_10023791
548 Ga0307412_10000029
549 Ga0307412_10176898
550 Ga0307416_100004275
551 Ga0307414_10000351
552 Ga0307414_10002519
553 Ga0307414_10029781
554 Ga0307414_10029782
555 Ga0307414_10091232
556 Ga0307414_10102860
557 Ga0307411_10269096
558 Ga0373945_0017222
559 Ga0373943_0057305
560 Ga0436365_0133752
561 Ga0439431_0006091
562 Ga0439445_0008602
563 Ga0451577_0001236
564 Ga0451577_0322946
565 Ga0453684_0026210
566 Ga0466970_0010505
567 Ga0451576_0041711
568 Ga0451576_0076509
569 Ga0451576_0220308
570 Ga0466967_0000303
571 Ga0495592_0000231
572 Ga0495603_0121913
573 Ga0495650_0030003
574 Ga0495662_0010850
575 Ga0495618_0003576
576 Ga0495618_0076261
577 Ga0495628_0000634
578 Ga0495628_0027208
579 Ga0495630_0003030
580 Ga0495630_0009889
581 Ga0495630_0130438
582 Ga0495630_0236322
583 Ga0495630_0345387
584 Ga0495666_0021594
585 Ga0495640_0002791
586 Ga0495586_0004238
587 Ga0495586_0085278
588 Ga0495645_0013067
589 Ga0495667_0006709
590 Ga0495625_0092766
591 Ga0495657_0046579
592 Ga0495599_0003061
593 Ga0495599_0017835
594 Ga0495674_0029983
595 Ga0495674_0108515
596 Ga0495684_0010827
597 Ga0495614_0032479
598 Ga0496103_0295628
599 Ga0496109_0169136
600 Ga0496115_0097586
601 Ga0501034_0001620
602 Ga0501034_0002601
603 Ga0501034_0010481
604 Ga0501034_0024874
605 Ga0501034_0043462
606 Ga0501034_0132346
607 Ga0501034_0140430
608 Ga0501034_0196854
609 Ga0501034_0227414
610 Ga0501038_0010078
611 Ga0501038_0103395
612 Ga0501039_0001694
613 Ga0501043_0018633
614 Ga0501046_0000012
615 Ga0501070_0052047
616 Ga0501077_0034172
617 Ga0501202_001960
618 Ga0501217_000031
619 Ga0501217_008804
620 Ga0501223_001544
621 Ga0501224_000385
622 Ga0501233_000745
623 Ga0501242_003565
624 Ga0501243_003378
625 Ga0501250_001845
626 Ga0501257_001269
627 Ga0501259_000697
628 Ga0501261_002989
629 Ga0501225_0005479
630 Ga0501225_0019021
631 Ga0501234_008355
632 Ga0501080_0069175
633 Ga0501081_0041223
634 Ga0501083_0066504
635 Ga0501044_0385045
636 Ga0501045_0283017
637 nmdc:mga03n38_23159_c1
638 nmdc:mga0k408_114196_c1
639 nmdc:mga06z11_81686_c1
640 nmdc:mga05p37_94755_c1
641 nmdc:mga09592_35631_c1
642 nmdc:mga09592_64303_c1
643 nmdc:mga09592_91940_c1
644 nmdc:mga06r32_7523_c1
645 nmdc:mga08y16_120894_c1
646 nmdc:mga08y16_166172_c1
647 nmdc:mga08y16_177396_c1
648 nmdc:mga08y16_25925_c1
649 nmdc:mga08y16_5616_c1
650 nmdc:mga08y16_924_c1
651 nmdc:mga08y16_93295_c1
652 nmdc:mga08y16_97842_c1
653 Ga0500635_0000006
654 Ga0500651_0000256
655 Ga0500616_0017348
656 Ga0500616_0028554
657 Ga0501084_0035874
658 Ga0587094_010535
659 Ga0587076_000298
660 Ga0501082_0097370
661 Ga0530510_0235714
662 2522549357
663 2523466617
664 2687237702
665 2688392331
666 2688393887
667 2738760234
668 2776612288
669 2787436511
670 2812325479
671 2837274221
672 2857476490
673 2857738014
674 2868092386
675 2870724833
676 2883068162
677 2884635130
678 2896090053
679 2896111485
680 2911141010
681 2919695215
682 8055177486

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

67

185

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uia-assembly1.cif.gz_B crystal structure of an oxidoreductase from agrobacterium radiobacter in complex with nad+, r-2,3-dihydroxyisovalerate and magnesium 0.8566 4 363
5uia-assembly1.cif.gz_B crystal structure of an oxidoreductase from agrobacterium radiobacter in complex with nad+, r-2,3-dihydroxyisovalerate and magnesium 0.8426 4 363
7bvj-assembly4.cif.gz_D udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p21) 0.8386 5 357
1tlt-assembly1.cif.gz_B crystal structure of a putative oxidoreductase (virulence factor mvim homolog) 0.8324 5 356
7bvk-assembly2.cif.gz_B udp-n-acetylglucosamine 3-dehydrogenase gnna from acidithiobacillus ferrooxidans (p212121) 0.832 5 357
ID Description Score Start End Superfamily
af_D4A903_1_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9416 5 121 3.40.50.720
af_Q2G1E6_2_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9395 5 121 3.40.50.720
af_P42599_1_134_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9376 6 124 3.40.50.720
af_M9PE54_6_126_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9351 5 121 3.40.50.720
af_Q2G1E5_4_119_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9325 6 118 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A350SJ57-F1-model_v4 deleted 0.9724 1 367
AF-A0A5R9KX69-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9663 1 367 GO:0000166
AF-A0A350SJ57-F1-model_v4 deleted 0.9595 1 367
AF-A0A3A8SX78-F1-model_v4 deleted 0.9525 58 146
AF-A0A2X3C520-F1-model_v4 Oxidoreductase (EC 1.-.-.-) 0.9428 6 122 GO:0000166
GO:0016491

Map