F414795

General Info

Members Datasets Scaffolds Average Seq Length
341 227 682 276

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10055777|Ga0307405_100557772
Length 299
Sequence MSTDISEPLRPLALLDRKTPMLRIAVPNKGSLSETAAEMLAEAGYAGRRDSKTLHVIDAENDVEFFFLRPRDIATYVASGALDVGITGRDLLKDVPQQAREIQALGFAHSTFRFAAPPGAFHGIEDLAGVRVASAYPGLVDAFLREHGVEAELVPLDGAVESAVRLGVADAIADVVETGTTLRQAGLEIFGPVIIESEAVLISRPGDADGTETLLRRLRGVIVARRYVLLDYDLPADLVDQAVAITPGRESPTISPLKDPTWVAVRVMIPRKGVNQVMDALYALGARALLVTAIHAARL

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
8 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
65 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
66 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
67 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
74 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
75 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
76 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
77 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
78 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
79 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
82 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
83 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
94 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
95 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
96 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
97 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
98 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
99 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
100 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
101 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
102 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
103 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
104 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
105 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
125 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
129 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
130 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
131 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
132 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
133 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
134 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
135 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
139 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
140 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
141 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
142 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
145 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
146 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
147 2643221546 Microbacterium sp. Root53 Isolate Unclassified
148 2643221549 Agromyces sp. Root1464 Isolate Unclassified
149 2643221553 Microbacterium sp. Root553 Isolate Unclassified
150 2643221566 Microbacterium sp. Root166 Isolate Unclassified
151 2643221572 Leifsonia sp. Root60 Isolate Unclassified
152 2643221575 Microbacterium sp. Root61 Isolate Unclassified
153 2643221597 Microbacterium sp. Root180 Isolate Unclassified
154 2643221616 Leifsonia sp. Root227 Isolate Unclassified
155 2643221619 Agromyces sp. Root81 Isolate Unclassified
156 2643221630 Microbacterium sp. Root322 Isolate Unclassified
157 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
158 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
159 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
160 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
161 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
162 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
163 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
164 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
165 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
166 2773857759 Microbacterium sp. 1294 Isolate Unclassified
167 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
168 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
169 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
170 2808606372 Agromyces sp. 23-23 Isolate Unclassified
171 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
172 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
173 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
174 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
175 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
176 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
177 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
178 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
179 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
180 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
181 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
182 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
183 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
184 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
185 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
186 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
187 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
188 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
189 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
190 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
191 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
192 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
193 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
194 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
195 2919069694 Microbacterium sp. 1154 Isolate Unclassified
196 2919395869 Microbacterium resistens 2980 Isolate Unclassified
197 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
198 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
199 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
200 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
201 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
202 2928153084 Leifsonia sp. 563 Isolate Unclassified
203 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
204 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
205 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
206 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
207 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
208 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
209 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
210 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
211 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
212 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
213 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
214 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
215 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
216 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
217 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
218 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
219 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
220 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
221 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
222 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
223 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
224 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
225 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
226 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
227 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.49
Metatranscriptomes 1.17
Isolates 24.34

Biome Distribution

Category Percentage (%)
Aerial Root 0.59
Bulb 0
Endosphere 11.44
Nodule 0
Rhizoplane 9.97
Rhizosphere 46.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10055777 3300031731 Bacteria 2475
2 JGI24740J21852_10015215 3300001979 Bacteria 2815
3 JGI24739J22299_10034176 3300001989 Bacteria 1734
4 JGI24737J22298_10009821 3300001990 Bacteria 3170
5 JGI24735J21928_10010671 3300002067 Bacteria 2923
6 JGI25154J39366_1002618 3300002738 Bacteria 4465
7 JGI25406J46586_10031034 3300003203 Bacteria 2004
8 Ga0055527_1000001 3300003760 Bacteria 850044
9 Ga0055529_1000018 3300003763 Bacteria 344344
10 Ga0065714_10072852 3300005288 Bacteria 3287
11 Ga0065714_10086457 3300005288 Bacteria 2100
12 Ga0070658_10210377 3300005327 Bacteria 1643
13 Ga0070682_100031035 3300005337 Bacteria 3230
14 Ga0070660_100279763 3300005339 Bacteria 1365
15 Ga0070659_100330508 3300005366 Bacteria 1276
16 Ga0070663_100351700 3300005455 Bacteria 1193
17 Ga0068853_100035681 3300005539 Bacteria 4225
18 Ga0070665_100474133 3300005548 Bacteria 1262
19 Ga0081539_10000352 3300005985 Bacteria 100942
20 Ga0075365_10006389 3300006038 Bacteria 6483
21 Ga0075365_10055527 3300006038 Bacteria 2629
22 Ga0075365_10296840 3300006038 Bacteria 1137
23 Ga0075368_10069698 3300006042 Bacteria 1418
24 Ga0075364_10005899 3300006051 Bacteria 7156
25 Ga0075364_10047097 3300006051 Bacteria 2807
26 Ga0075369_10013055 3300006186 Bacteria 3289
27 Ga0075369_10040953 3300006186 Bacteria 1982
28 Ga0075370_10222928 3300006353 Bacteria 1115
29 Ga0075428_100044539 3300006844 Bacteria 4876
30 Ga0075430_100050155 3300006846 Bacteria 3521
31 Ga0075431_100015154 3300006847 Bacteria 7809
32 Ga0075429_100017697 3300006880 Bacteria 6163
33 Ga0105244_10058429 3300009036 Bacteria 1946
34 Ga0105244_10204178 3300009036 Bacteria 931
35 Ga0105244_10204179 3300009036 Bacteria 931
36 Ga0114129_10004384 3300009147 Bacteria 19901
37 Ga0105243_10001747 3300009148 Bacteria 18717
38 Ga0105239_10192495 3300010375 Bacteria 2283
39 Ga0157370_10041609 3300013104 Bacteria 4430
40 Ga0157369_10066813 3300013105 Bacteria 3868
41 Ga0157369_10123108 3300013105 Bacteria 2751
42 Ga0171462_1003 3300013250 Bacteria 853796
43 Ga0157372_10042040 3300013307 Bacteria 5054
44 Ga0157372_10072270 3300013307 Bacteria 3887
45 Ga0157372_10076588 3300013307 Bacteria 3777
46 Ga0157372_10130387 3300013307 Bacteria 2892
47 Ga0197907_11053212 3300020069 Bacteria 2814
48 Ga0206354_11077156 3300020081 Bacteria 6863
49 Ga0206353_10863713 3300020082 Bacteria 1232
50 Ga0206353_11120005 3300020082 Bacteria 12832
51 Ga0209672_100006 3300025228 Bacteria 1004497
52 Ga0209147_100710 3300025229 Bacteria 16969
53 Ga0209258_101881 3300025242 Bacteria 6271
54 Ga0209646_1000099 3300025246 Bacteria 180436
55 Ga0209677_101147 3300025253 Bacteria 12330
56 Ga0209148_1000015 3300025254 Bacteria 850103
57 Ga0209455_1000013 3300025272 Bacteria 850103
58 Ga0207655_1030746 3300025728 Bacteria 2490
59 Ga0207655_1039211 3300025728 Bacteria 2061
60 Ga0207647_10005762 3300025904 Bacteria 9038
61 Ga0207647_10048172 3300025904 Bacteria 2647
62 Ga0207647_10200935 3300025904 Bacteria 1153
63 Ga0207705_10112850 3300025909 Bacteria 2010
64 Ga0207705_10141750 3300025909 Bacteria 1795
65 Ga0207690_10266015 3300025932 Bacteria 1330
66 Ga0207709_10007428 3300025935 Bacteria 6108
67 Ga0207709_10018937 3300025935 Bacteria 3862
68 Ga0207709_10128799 3300025935 Bacteria 1721
69 Ga0207639_10076037 3300026041 Bacteria 2642
70 Ga0265327_10020484 3300031251 Bacteria 4026
71 Ga0307408_100507705 3300031548 Bacteria 1057
72 Ga0307508_10358259 3300031616 Bacteria 1050
73 Ga0307406_10000108 3300031901 Bacteria 48095
74 Ga0307406_10001311 3300031901 Bacteria 13964
75 Ga0307406_10005100 3300031901 Bacteria 7169
76 Ga0307406_10047474 3300031901 Bacteria 2706
77 Ga0307409_100043523 3300031995 Bacteria 3373
78 Ga0307409_100328965 3300031995 Bacteria 1433
79 Ga0307414_10013261 3300032004 Bacteria 4903
80 Ga0307414_10596727 3300032004 Bacteria 990
81 Ga0307411_10145307 3300032005 Bacteria 1755
82 Ga0373960_0068896 3300035121 Bacteria 1090
83 Ga0395899_0003802 3300037312 Bacteria 11923
84 Ga0395900_0005268 3300037418 Bacteria 13562
85 Ga0395900_0335337 3300037418 Bacteria 1489
86 Ga0395898_0000131 3300037466 Bacteria 192369
87 Ga0395898_0035303 3300037466 Bacteria 4974
88 Ga0395901_0410945 3300038443 Bacteria 1389
89 Ga0451789_0549923 3300041443 Bacteria 1851
90 Ga0451793_0251771 3300041452 Bacteria 2432
91 Ga0451793_0555300 3300041452 Bacteria 1342
92 Ga0451797_0557326 3300041453 Bacteria 2280
93 Ga0451797_1480909 3300041453 Bacteria 1809
94 Ga0451853_0622581 3300041512 Bacteria 2027
95 Ga0451853_2714952 3300041512 Bacteria 1007
96 Ga0466972_0004672 3300044658 Bacteria 6857
97 Ga0466972_0039890 3300044658 Bacteria 2290
98 Ga0466965_0005759 3300044683 Bacteria 5593
99 Ga0466965_0091780 3300044683 Bacteria 1546
100 Ga0466961_0042029 3300044693 Bacteria 2930
101 Ga0466970_0000039 3300044765 Bacteria 47478
102 Ga0466970_0010533 3300044765 Bacteria 4696
103 Ga0466957_0022408 3300044842 Bacteria 3727
104 Ga0466959_0010635 3300045049 Bacteria 6589
105 Ga0466958_0022760 3300045836 Bacteria 3673
106 Ga0466958_0196497 3300045836 Bacteria 1283
107 Ga0495627_000357 3300046453 Bacteria 42749
108 Ga0495650_0071606 3300046471 Bacteria 1359
109 Ga0495607_0050261 3300046501 Bacteria 2428
110 Ga0495620_0032166 3300046515 Bacteria 2394
111 Ga0495654_0065535 3300046530 Bacteria 1734
112 Ga0495645_0104524 3300046543 Bacteria 2011
113 Ga0495683_0001733 3300047323 Bacteria 13790
114 Ga0496100_0140431 3300048903 Bacteria 1711
115 Ga0496101_0006588 3300048904 Bacteria 7482
116 Ga0496101_0008853 3300048904 Bacteria 6588
117 Ga0496102_0025177 3300048905 Bacteria 5294
118 Ga0496102_0289099 3300048905 Bacteria 1545
119 Ga0496103_0004876 3300048906 Bacteria 8104
120 Ga0496104_0031961 3300048907 Bacteria 4897
121 Ga0496105_0014278 3300048908 Bacteria 6321
122 Ga0496105_0105435 3300048908 Bacteria 2327
123 Ga0496106_0326451 3300048909 Bacteria 1232
124 Ga0496106_0403265 3300048909 Bacteria 1099
125 Ga0496107_0094225 3300048910 Bacteria 2191
126 Ga0496109_0013353 3300048912 Bacteria 7121
127 Ga0496109_0195245 3300048912 Bacteria 1902
128 Ga0496109_0263416 3300048912 Bacteria 1624
129 Ga0496110_0015332 3300048913 Bacteria 6376
130 Ga0496112_0014249 3300048915 Bacteria 7369
131 Ga0496113_0090078 3300048916 Bacteria 2362
132 Ga0496113_0132007 3300048916 Bacteria 1960
133 Ga0496114_0009600 3300048917 Bacteria 7686
134 Ga0496114_0065407 3300048917 Bacteria 3046
135 Ga0496114_0075076 3300048917 Bacteria 2847
136 Ga0496114_0092436 3300048917 Bacteria 2570
137 Ga0496114_0232906 3300048917 Bacteria 1618
138 Ga0496114_0452072 3300048917 Bacteria 1138
139 Ga0496115_0030408 3300048918 Bacteria 4248
140 Ga0496115_0049310 3300048918 Bacteria 3370
141 Ga0496115_0136131 3300048918 Bacteria 2025
142 Ga0496115_0191348 3300048918 Bacteria 1690
143 Ga0496116_0012251 3300048919 Bacteria 7013
144 Ga0496117_0000128 3300048920 Bacteria 166039
145 Ga0496117_0000468 3300048920 Bacteria 67418
146 Ga0496117_0000630 3300048920 Bacteria 57051
147 Ga0496117_0001217 3300048920 Bacteria 38589
148 Ga0496117_0003273 3300048920 Bacteria 19014
149 Ga0496117_0021550 3300048920 Bacteria 5207
150 Ga0496118_0000089 3300048921 Bacteria 175942
151 Ga0496118_0003469 3300048921 Bacteria 19796
152 Ga0496118_0004920 3300048921 Bacteria 15520
153 Ga0496118_0017521 3300048921 Bacteria 6514
154 Ga0496118_0182088 3300048921 Bacteria 1268
155 Ga0496119_0001447 3300048922 Bacteria 28549
156 Ga0496119_0002046 3300048922 Bacteria 22830
157 Ga0496119_0012977 3300048922 Bacteria 6695
158 Ga0496119_0020587 3300048922 Bacteria 4806
159 Ga0496119_0028555 3300048922 Bacteria 3804
160 Ga0496119_0050388 3300048922 Bacteria 2567
161 Ga0496119_0096264 3300048922 Bacteria 1671
162 Ga0496120_0001603 3300048923 Bacteria 26271
163 Ga0496120_0001799 3300048923 Bacteria 24071
164 Ga0496120_0012235 3300048923 Bacteria 5849
165 Ga0496120_0015445 3300048923 Bacteria 5036
166 Ga0496121_0059492 3300048924 Bacteria 3150
167 Ga0496122_0000054 3300048925 Bacteria 259135
168 Ga0496122_0000240 3300048925 Bacteria 123001
169 Ga0496122_0001395 3300048925 Bacteria 39223
170 Ga0496122_0001458 3300048925 Bacteria 38143
171 Ga0496122_0031952 3300048925 Bacteria 4364
172 Ga0496122_0258447 3300048925 Bacteria 968
173 Ga0496123_0000039 3300048926 Bacteria 259107
174 Ga0496123_0000225 3300048926 Bacteria 115105
175 Ga0496123_0001327 3300048926 Bacteria 34954
176 Ga0496123_0003197 3300048926 Bacteria 18680
177 Ga0496123_0060790 3300048926 Bacteria 2433
178 Ga0496123_0074503 3300048926 Bacteria 2101
179 Ga0496124_0000037 3300048927 Bacteria 317430
180 Ga0496124_0001567 3300048927 Bacteria 33061
181 Ga0496124_0002353 3300048927 Bacteria 24953
182 Ga0496124_0002402 3300048927 Bacteria 24604
183 Ga0496124_0007046 3300048927 Bacteria 12042
184 Ga0496124_0028080 3300048927 Bacteria 5037
185 Ga0496124_0174213 3300048927 Bacteria 1662
186 Ga0496124_0228084 3300048927 Bacteria 1395
187 Ga0496124_0238552 3300048927 Bacteria 1354
188 Ga0496125_0000061 3300048928 Bacteria 262739
189 Ga0496125_0002224 3300048928 Bacteria 25845
190 Ga0496125_0003167 3300048928 Bacteria 20405
191 Ga0496125_0010326 3300048928 Bacteria 9455
192 Ga0496125_0014573 3300048928 Bacteria 7649
193 Ga0496125_0053552 3300048928 Bacteria 3306
194 Ga0496125_0189408 3300048928 Bacteria 1360
195 Ga0496126_0000998 3300048929 Bacteria 48229
196 Ga0496126_0002014 3300048929 Bacteria 28717
197 Ga0496126_0026512 3300048929 Bacteria 5556
198 Ga0496126_0049890 3300048929 Bacteria 3818
199 Ga0496126_0059944 3300048929 Bacteria 3425
200 Ga0496126_0093243 3300048929 Bacteria 2644
201 Ga0496126_0200928 3300048929 Bacteria 1683
202 Ga0496126_0429869 3300048929 Bacteria 1066
203 Ga0496126_0566507 3300048929 Bacteria 899
204 Ga0501031_0041101 3300049568 Bacteria 3019
205 Ga0501033_0147162 3300049570 Bacteria 1700
206 Ga0501034_0003309 3300049571 Bacteria 18396
207 Ga0501034_0007434 3300049571 Bacteria 11660
208 Ga0501034_0086909 3300049571 Bacteria 3127
209 Ga0501036_0047042 3300049572 Bacteria 3653
210 Ga0501037_0003649 3300049573 Bacteria 11166
211 Ga0501038_0002557 3300049574 Bacteria 16962
212 Ga0501038_0055559 3300049574 Bacteria 3401
213 Ga0501039_0063335 3300049575 Bacteria 2865
214 Ga0501041_0146625 3300049577 Bacteria 1473
215 Ga0501042_0000243 3300049578 Bacteria 26410
216 Ga0501042_0298697 3300049578 Bacteria 1163
217 Ga0501043_0015102 3300049579 Bacteria 6043
218 Ga0501046_0023560 3300049580 Bacteria 5062
219 Ga0501047_0483299 3300049581 Bacteria 1066
220 Ga0501048_0000919 3300049582 Bacteria 21658
221 Ga0501068_0164331 3300049584 Bacteria 1400
222 Ga0501070_0000198 3300049586 Bacteria 56232
223 Ga0501070_0000641 3300049586 Bacteria 32171
224 Ga0501070_0062380 3300049586 Bacteria 3088
225 Ga0501073_0029271 3300049589 Bacteria 3936
226 Ga0501075_0460214 3300049591 Bacteria 970
227 Ga0501080_0317532 3300049742 Bacteria 1411
228 Ga0501083_0000003 3300049744 Bacteria 235949
229 Ga0501044_0185478 3300049823 Bacteria 2046
230 Ga0501044_0244998 3300049823 Bacteria 1735
231 nmdc:mga00v17_106108_c1 3300050491 Bacteria 1778
232 nmdc:mga00v17_197153_c1 3300050491 Bacteria 1301
233 nmdc:mga00v17_50008_c1 3300050491 Bacteria 2538
234 nmdc:mga00v17_58930_c1 3300050491 Bacteria 2354
235 nmdc:mga00v17_98737_c1 3300050491 Bacteria 1841
236 nmdc:mga0yw44_16054_c1 3300050492 Bacteria 4034
237 nmdc:mga0yw44_491_c1 3300050492 Bacteria 14097
238 nmdc:mga07m45_238356_c1 3300050496 Bacteria 1058
239 nmdc:mga05p37_81181_c1 3300050507 Bacteria 3994
240 nmdc:mga09592_98586_c1 3300050508 Bacteria 2502
241 nmdc:mga0qj67_8101_c1 3300050509 Bacteria 7777
242 nmdc:mga06r32_58002_c1 3300050510 Bacteria 3721
243 nmdc:mga0sz30_2910_c1 3300050516 Bacteria 6136
244 Ga0500643_000340 3300053087 Bacteria 37017
245 Ga0500556_0000001 3300053104 Bacteria 1135060
246 Ga0500556_0000215 3300053104 Bacteria 47104
247 Ga0500562_003100 3300053108 Bacteria 4150
248 Ga0500593_011699 3300053117 Bacteria 3709
249 Ga0500559_0000248 3300053136 Bacteria 42720
250 Ga0500559_0001068 3300053136 Bacteria 16619
251 Ga0500559_0006884 3300053136 Bacteria 5090
252 Ga0500568_0000006 3300053139 Bacteria 522235
253 Ga0500568_0000014 3300053139 Bacteria 223550
254 Ga0500573_0000017 3300053140 Bacteria 181426
255 Ga0500577_0021160 3300053142 Bacteria 2139
256 Ga0500577_0121495 3300053142 Bacteria 1087
257 Ga0501082_0075804 3300060353 Bacteria 2898
258 Ga0466962_0017106 3300061719 Bacteria 3494
259 2588108386 2585428157 Bacteria 3018951
260 2643733697 2643221542 Bacteria 3563959
261 2643752024 2643221546 Bacteria 2910897
262 2643767806 2643221549 Bacteria 4042819
263 2643785743 2643221553 Bacteria 3544260
264 2643848396 2643221566 Bacteria 3460379
265 2643875113 2643221572 Bacteria 3614809
266 2643885568 2643221575 Bacteria 4022601
267 2643995858 2643221597 Bacteria 3347721
268 2644096172 2643221616 Bacteria 4066575
269 2644111185 2643221619 Bacteria 4158469
270 2644170271 2643221630 Bacteria 3601215
271 2644382169 2643221669 Bacteria 3611286
272 2644680155 2643221724 Bacteria 3593515
273 2730229605 2728369380 Bacteria 3620317
274 2739235325 2738543011 Bacteria 5731169
275 2744954818 2744054611 Bacteria 5611514
276 2747952818 2747842429 Bacteria 3914386
277 2753302204 2751185788 Bacteria 4541048
278 2758226241 2757320536 Bacteria 3629334
279 2774380611 2773857758 Bacteria 3592392
280 2774384405 2773857759 Bacteria 2963774
281 2774399644 2773857763 Bacteria 4180068
282 2808631297 2808606306 Bacteria 3608896
283 2808885541 2808606368 Bacteria 3174172
284 2808901971 2808606372 Bacteria 4649509
285 2809227384 2808606447 Bacteria 3572005
286 2812323001 2811994872 Bacteria 4121241
287 2816427739 2816332119 Bacteria 8120218
288 2821269905 2821268502 Bacteria 3750023
289 2833710834 2833709550 Bacteria 4008291
290 2844842579 2844841374 Bacteria 3917147
291 2852633238 2852632344 Bacteria 3463163
292 2852647245 2852646457 Bacteria 3408613
293 2852665224 2852663356 Bacteria 4090475
294 2857720329 2857720070 Bacteria 3189373
295 2857723753 2857723135 Bacteria 4217853
296 2862996317 2862993130 Bacteria 3860849
297 2870630248 2870628048 Bacteria 3696012
298 2883825277 2883821847 Bacteria 5121194
299 2889301677 2889300758 Bacteria 5690814
300 2895661240 2895660088 Bacteria 3782833
301 2904432705 2904430863 Bacteria 3486923
302 2904503150 2904501621 Bacteria 3401437
303 2904512134 2904509784 Bacteria 3520416
304 2906802932 2906799679 Bacteria 4031749
305 2908675673 2908674828 Bacteria 3382763
306 2908681042 2908678064 Bacteria 3482747
307 2909074721 2909074476 Bacteria 3436050
308 2919058264 2919055335 Bacteria 3875751
309 2919072487 2919069694 Bacteria 3622919
310 2919399027 2919395869 Bacteria 3704152
311 2919446251 2919443155 Bacteria 4072969
312 2919524637 2919523602 Bacteria 3788128
313 2919714294 2919713450 Bacteria 7431245
314 2928091834 2928090899 Bacteria 3158267
315 2928105158 2928104781 Bacteria 3877447
316 2928156439 2928153084 Bacteria 4020257
317 2928500657 2928500415 Bacteria 3384541
318 2939661078 2939660829 Bacteria 3784848
319 2939747599 2939743619 Bacteria 5762299
320 2945971711 2945968032 Bacteria 4111363
321 2946033840 2946033335 Bacteria 3835514
322 2946044171 2946041624 Bacteria 4191385
323 2946080985 2946080515 Bacteria 4310960
324 2974297041 2974294766 Bacteria 3767688
325 2974326725 2974324384 Bacteria 3750535
326 2977231273 2977228692 Bacteria 3450105
327 2977240055 2977236895 Bacteria 3569373
328 2977254007 2977251589 Bacteria 2952848
329 2977266498 2977264416 Bacteria 3750737
330 2984545672 2984542743 Bacteria 3569378
331 2984581404 2984580707 Bacteria 3351387
332 2995728204 2995726249 Bacteria 3470435
333 8004185196 8004182704 Bacteria 3391155
334 8004214194 8004212874 Bacteria 2861420
335 8016257671 8016254467 Bacteria 3797036
336 8025478896 8025478263 Bacteria 8209203
337 8045831473 8045830549 Bacteria 4444727
338 8046356473 8046352972 Bacteria 3613806
339 8054111778 8054107350 Bacteria 5022511
340 8055035769 8055034563 Bacteria 3562128
341 8055038677 8055037949 Bacteria 3337834
342 Ga0307405_10055777
343 JGI24740J21852_10015215
344 JGI24739J22299_10034176
345 JGI24737J22298_10009821
346 JGI24735J21928_10010671
347 JGI25154J39366_1002618
348 JGI25406J46586_10031034
349 Ga0055527_1000001
350 Ga0055529_1000018
351 Ga0065714_10072852
352 Ga0065714_10086457
353 Ga0070658_10210377
354 Ga0070682_100031035
355 Ga0070660_100279763
356 Ga0070659_100330508
357 Ga0070663_100351700
358 Ga0068853_100035681
359 Ga0070665_100474133
360 Ga0081539_10000352
361 Ga0075365_10006389
362 Ga0075365_10055527
363 Ga0075365_10296840
364 Ga0075368_10069698
365 Ga0075364_10005899
366 Ga0075364_10047097
367 Ga0075369_10013055
368 Ga0075369_10040953
369 Ga0075370_10222928
370 Ga0075428_100044539
371 Ga0075430_100050155
372 Ga0075431_100015154
373 Ga0075429_100017697
374 Ga0105244_10058429
375 Ga0105244_10204178
376 Ga0105244_10204179
377 Ga0114129_10004384
378 Ga0105243_10001747
379 Ga0105239_10192495
380 Ga0157370_10041609
381 Ga0157369_10066813
382 Ga0157369_10123108
383 Ga0171462_1003
384 Ga0157372_10042040
385 Ga0157372_10072270
386 Ga0157372_10076588
387 Ga0157372_10130387
388 Ga0197907_11053212
389 Ga0206354_11077156
390 Ga0206353_10863713
391 Ga0206353_11120005
392 Ga0209672_100006
393 Ga0209147_100710
394 Ga0209258_101881
395 Ga0209646_1000099
396 Ga0209677_101147
397 Ga0209148_1000015
398 Ga0209455_1000013
399 Ga0207655_1030746
400 Ga0207655_1039211
401 Ga0207647_10005762
402 Ga0207647_10048172
403 Ga0207647_10200935
404 Ga0207705_10112850
405 Ga0207705_10141750
406 Ga0207690_10266015
407 Ga0207709_10007428
408 Ga0207709_10018937
409 Ga0207709_10128799
410 Ga0207639_10076037
411 Ga0265327_10020484
412 Ga0307408_100507705
413 Ga0307508_10358259
414 Ga0307406_10000108
415 Ga0307406_10001311
416 Ga0307406_10005100
417 Ga0307406_10047474
418 Ga0307409_100043523
419 Ga0307409_100328965
420 Ga0307414_10013261
421 Ga0307414_10596727
422 Ga0307411_10145307
423 Ga0373960_0068896
424 Ga0395899_0003802
425 Ga0395900_0005268
426 Ga0395900_0335337
427 Ga0395898_0000131
428 Ga0395898_0035303
429 Ga0395901_0410945
430 Ga0451789_0549923
431 Ga0451793_0251771
432 Ga0451793_0555300
433 Ga0451797_0557326
434 Ga0451797_1480909
435 Ga0451853_0622581
436 Ga0451853_2714952
437 Ga0466972_0004672
438 Ga0466972_0039890
439 Ga0466965_0005759
440 Ga0466965_0091780
441 Ga0466961_0042029
442 Ga0466970_0000039
443 Ga0466970_0010533
444 Ga0466957_0022408
445 Ga0466959_0010635
446 Ga0466958_0022760
447 Ga0466958_0196497
448 Ga0495627_000357
449 Ga0495650_0071606
450 Ga0495607_0050261
451 Ga0495620_0032166
452 Ga0495654_0065535
453 Ga0495645_0104524
454 Ga0495683_0001733
455 Ga0496100_0140431
456 Ga0496101_0006588
457 Ga0496101_0008853
458 Ga0496102_0025177
459 Ga0496102_0289099
460 Ga0496103_0004876
461 Ga0496104_0031961
462 Ga0496105_0014278
463 Ga0496105_0105435
464 Ga0496106_0326451
465 Ga0496106_0403265
466 Ga0496107_0094225
467 Ga0496109_0013353
468 Ga0496109_0195245
469 Ga0496109_0263416
470 Ga0496110_0015332
471 Ga0496112_0014249
472 Ga0496113_0090078
473 Ga0496113_0132007
474 Ga0496114_0009600
475 Ga0496114_0065407
476 Ga0496114_0075076
477 Ga0496114_0092436
478 Ga0496114_0232906
479 Ga0496114_0452072
480 Ga0496115_0030408
481 Ga0496115_0049310
482 Ga0496115_0136131
483 Ga0496115_0191348
484 Ga0496116_0012251
485 Ga0496117_0000128
486 Ga0496117_0000468
487 Ga0496117_0000630
488 Ga0496117_0001217
489 Ga0496117_0003273
490 Ga0496117_0021550
491 Ga0496118_0000089
492 Ga0496118_0003469
493 Ga0496118_0004920
494 Ga0496118_0017521
495 Ga0496118_0182088
496 Ga0496119_0001447
497 Ga0496119_0002046
498 Ga0496119_0012977
499 Ga0496119_0020587
500 Ga0496119_0028555
501 Ga0496119_0050388
502 Ga0496119_0096264
503 Ga0496120_0001603
504 Ga0496120_0001799
505 Ga0496120_0012235
506 Ga0496120_0015445
507 Ga0496121_0059492
508 Ga0496122_0000054
509 Ga0496122_0000240
510 Ga0496122_0001395
511 Ga0496122_0001458
512 Ga0496122_0031952
513 Ga0496122_0258447
514 Ga0496123_0000039
515 Ga0496123_0000225
516 Ga0496123_0001327
517 Ga0496123_0003197
518 Ga0496123_0060790
519 Ga0496123_0074503
520 Ga0496124_0000037
521 Ga0496124_0001567
522 Ga0496124_0002353
523 Ga0496124_0002402
524 Ga0496124_0007046
525 Ga0496124_0028080
526 Ga0496124_0174213
527 Ga0496124_0228084
528 Ga0496124_0238552
529 Ga0496125_0000061
530 Ga0496125_0002224
531 Ga0496125_0003167
532 Ga0496125_0010326
533 Ga0496125_0014573
534 Ga0496125_0053552
535 Ga0496125_0189408
536 Ga0496126_0000998
537 Ga0496126_0002014
538 Ga0496126_0026512
539 Ga0496126_0049890
540 Ga0496126_0059944
541 Ga0496126_0093243
542 Ga0496126_0200928
543 Ga0496126_0429869
544 Ga0496126_0566507
545 Ga0501031_0041101
546 Ga0501033_0147162
547 Ga0501034_0003309
548 Ga0501034_0007434
549 Ga0501034_0086909
550 Ga0501036_0047042
551 Ga0501037_0003649
552 Ga0501038_0002557
553 Ga0501038_0055559
554 Ga0501039_0063335
555 Ga0501041_0146625
556 Ga0501042_0000243
557 Ga0501042_0298697
558 Ga0501043_0015102
559 Ga0501046_0023560
560 Ga0501047_0483299
561 Ga0501048_0000919
562 Ga0501068_0164331
563 Ga0501070_0000198
564 Ga0501070_0000641
565 Ga0501070_0062380
566 Ga0501073_0029271
567 Ga0501075_0460214
568 Ga0501080_0317532
569 Ga0501083_0000003
570 Ga0501044_0185478
571 Ga0501044_0244998
572 nmdc:mga00v17_106108_c1
573 nmdc:mga00v17_197153_c1
574 nmdc:mga00v17_50008_c1
575 nmdc:mga00v17_58930_c1
576 nmdc:mga00v17_98737_c1
577 nmdc:mga0yw44_16054_c1
578 nmdc:mga0yw44_491_c1
579 nmdc:mga07m45_238356_c1
580 nmdc:mga05p37_81181_c1
581 nmdc:mga09592_98586_c1
582 nmdc:mga0qj67_8101_c1
583 nmdc:mga06r32_58002_c1
584 nmdc:mga0sz30_2910_c1
585 Ga0500643_000340
586 Ga0500556_0000001
587 Ga0500556_0000215
588 Ga0500562_003100
589 Ga0500593_011699
590 Ga0500559_0000248
591 Ga0500559_0001068
592 Ga0500559_0006884
593 Ga0500568_0000006
594 Ga0500568_0000014
595 Ga0500573_0000017
596 Ga0500577_0021160
597 Ga0500577_0121495
598 Ga0501082_0075804
599 Ga0466962_0017106
600 2588108386
601 2643733697
602 2643752024
603 2643767806
604 2643785743
605 2643848396
606 2643875113
607 2643885568
608 2643995858
609 2644096172
610 2644111185
611 2644170271
612 2644382169
613 2644680155
614 2730229605
615 2739235325
616 2744954818
617 2747952818
618 2753302204
619 2758226241
620 2774380611
621 2774384405
622 2774399644
623 2808631297
624 2808885541
625 2808901971
626 2809227384
627 2812323001
628 2816427739
629 2821269905
630 2833710834
631 2844842579
632 2852633238
633 2852647245
634 2852665224
635 2857720329
636 2857723753
637 2862996317
638 2870630248
639 2883825277
640 2889301677
641 2895661240
642 2904432705
643 2904503150
644 2904512134
645 2906802932
646 2908675673
647 2908681042
648 2909074721
649 2919058264
650 2919072487
651 2919399027
652 2919446251
653 2919524637
654 2919714294
655 2928091834
656 2928105158
657 2928156439
658 2928500657
659 2939661078
660 2939747599
661 2945971711
662 2946033840
663 2946044171
664 2946080985
665 2974297041
666 2974326725
667 2977231273
668 2977240055
669 2977254007
670 2977266498
671 2984545672
672 2984581404
673 2995728204
674 8004185196
675 8004214194
676 8016257671
677 8025478896
678 8045831473
679 8046356473
680 8054111778
681 8055035769
682 8055038677

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08029

HisG_C

HisG, C-terminal domain

224

296

0.99

PF01634

HisG

ATP phosphoribosyltransferase

69

220

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nh8-assembly1.cif.gz_A atp phosphoribosyltransferase (atp-prtase) from mycobacterium tuberculosis in complex with amp and histidine 0.9348 1 282
1nh8-assembly1.cif.gz_A atp phosphoribosyltransferase (atp-prtase) from mycobacterium tuberculosis in complex with amp and histidine 0.9316 1 282
5lht-assembly1.cif.gz_A atp phosphoribosyltransferase from mycobacterium tuberculosis in complex with the allosteric activator 3-(2-thienyl)-l-alanine 0.9268 1 282
5lht-assembly1.cif.gz_A atp phosphoribosyltransferase from mycobacterium tuberculosis in complex with the allosteric activator 3-(2-thienyl)-l-alanine 0.9237 1 282
8oy0-assembly1.cif.gz_F atp phosphoribosyltransferase (hiszg atpprt) from acinetobacter baumanii 0.9161 2 202
ID Description Score Start End Superfamily
1nh8A01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9764 1 81 3.40.190.10
5u99A03 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9634 211 276 3.30.70.120
af_Q58601_216_288_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9624 211 280 3.30.70.120
5lhuA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9561 91 175 3.40.190.10
1q1kA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9439 88 176 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7K1BZR7-F1-model_v4 ATP phosphoribosyltransferase (EC 2.4.2.17) 1.004 1 93 GO:0000105
GO:0003879
GO:0005737
AF-A0A1A3H287-F1-model_v4 ATP phosphoribosyltransferase (EC 2.4.2.17) 1.001 1 93 GO:0000105
GO:0003879
GO:0005737
AF-A0A6G3XGD6-F1-model_v4 ATP phosphoribosyltransferase (EC 2.4.2.17) 0.9968 2 88 GO:0000105
GO:0003879
GO:0005737
AF-A0A4V1TGN0-F1-model_v4 deleted 0.9955 2 137
AF-A0A7K0YVV0-F1-model_v4 deleted 0.9942 1 83

Map