F415107

General Info

Members Datasets Scaffolds Average Seq Length
342 204 684 282

Family's Representative Sequence

Representative Sequence 3300006186|Ga0075369_10000135|Ga0075369_1000013514
Length 305
Sequence MGNDKRRARLVTMSQRIVITGAAGMVGRVLAGQAARQGREVLTLTSAQCDITDPAAPERFVAAGDVVVNCAAYTQVDRAEADPDRAHAVNTVGAENVAHACARAGAELVHISTDYVFSGDFGGAEPRPYELDDEPGPLGVYGRTKLAGEFAVLAAMPDAHIVRTAWIFEGGDGADFVAAIRRLAPGEGTVDVVSDQVSSPTYVSDLVVALLEVADGAIREPVLHAANKGAVSRYEQARAVFEAIGADPGRIRPVGTDRHPRPAPRPMYSALSGVRSAHAGLTPLRPWREALTAALADVRPLPSTP

Samples

Sample ID Description Type Environment
1 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
78 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
124 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
125 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
126 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
127 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
128 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
129 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
133 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
134 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
138 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
139 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
140 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
141 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
142 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
149 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
150 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
160 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
166 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
167 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
168 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
169 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
170 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
171 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
174 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
189 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
192 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
193 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
194 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
195 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
196 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
197 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
198 2738541274 Mycobacterium sp. YR708 Isolate Unclassified
199 2738543028 Mycobacterium sp. YR782 Isolate Unclassified
200 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
201 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
202 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
203 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
204 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.66
Metatranscriptomes 0
Isolates 2.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.67
Nodule 0.29
Rhizoplane 11.11
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075369_10000135 3300006186 Bacteria 20568
2 Ga0055540_1003329 3300003792 Bacteria 7826
3 Ga0055540_1005645 3300003792 Bacteria 5193
4 Ga0070689_100020923 3300005340 Bacteria 4863
5 Ga0070691_10002250 3300005341 Bacteria 8542
6 Ga0070668_100000634 3300005347 Bacteria 23631
7 Ga0070668_100009993 3300005347 Bacteria 7031
8 Ga0070669_100006304 3300005353 Bacteria 8551
9 Ga0070669_100038154 3300005353 Bacteria 3487
10 Ga0070671_100014654 3300005355 Bacteria 6337
11 Ga0070671_100061069 3300005355 Bacteria 3138
12 Ga0070674_100013458 3300005356 Bacteria 5059
13 Ga0070674_100044692 3300005356 Bacteria 3022
14 Ga0070673_100028578 3300005364 Bacteria 4148
15 Ga0070659_100023392 3300005366 Bacteria 4727
16 Ga0070667_100031076 3300005367 Bacteria 4453
17 Ga0070667_100049555 3300005367 Bacteria 3537
18 Ga0070709_10060489 3300005434 Bacteria 2408
19 Ga0070709_10166721 3300005434 Bacteria 1536
20 Ga0070710_10007743 3300005437 Bacteria 5210
21 Ga0070701_10012778 3300005438 Bacteria 3796
22 Ga0070711_100003955 3300005439 Bacteria 8707
23 Ga0070705_100022432 3300005440 Bacteria 3374
24 Ga0070700_100005385 3300005441 Bacteria 6775
25 Ga0070694_100170852 3300005444 Bacteria 1601
26 Ga0070663_100006692 3300005455 Bacteria 6950
27 Ga0070678_100011767 3300005456 Bacteria 5411
28 Ga0068867_100004943 3300005459 Bacteria 9393
29 Ga0070679_100372859 3300005530 Bacteria 1374
30 Ga0068853_100001555 3300005539 Bacteria 16698
31 Ga0068853_100019477 3300005539 Bacteria 5626
32 Ga0070672_100232618 3300005543 Bacteria 1549
33 Ga0070696_100108897 3300005546 Bacteria 1993
34 Ga0070693_100010922 3300005547 Bacteria 4562
35 Ga0070665_100005485 3300005548 Bacteria 13075
36 Ga0070665_100278454 3300005548 Bacteria 1674
37 Ga0070665_100498062 3300005548 Bacteria 1229
38 Ga0070704_100000086 3300005549 Bacteria 31885
39 Ga0068855_100026241 3300005563 Bacteria 6971
40 Ga0068855_100354389 3300005563 Bacteria 1616
41 Ga0068854_100214584 3300005578 Bacteria 1520
42 Ga0070702_100013433 3300005615 Bacteria 4134
43 Ga0068859_100000860 3300005617 Bacteria 30921
44 Ga0068859_100128061 3300005617 Bacteria 2609
45 Ga0068864_100777139 3300005618 Bacteria 940
46 Ga0068866_10000540 3300005718 Bacteria 17290
47 Ga0068861_100000985 3300005719 Bacteria 17386
48 Ga0068861_100099262 3300005719 Bacteria 2312
49 Ga0068863_100009457 3300005841 Bacteria 9509
50 Ga0068863_100037587 3300005841 Bacteria 4610
51 Ga0068863_100194606 3300005841 Bacteria 1949
52 Ga0068858_100002631 3300005842 Bacteria 18094
53 Ga0068860_100001099 3300005843 Bacteria 29763
54 Ga0068860_100068317 3300005843 Bacteria 3376
55 Ga0068862_100002319 3300005844 Bacteria 16991
56 Ga0068862_100080799 3300005844 Bacteria 2819
57 Ga0081455_10029582 3300005937 Bacteria 4992
58 Ga0081455_10036414 3300005937 Bacteria 4382
59 Ga0075365_10001849 3300006038 Bacteria 9930
60 Ga0075365_10011473 3300006038 Bacteria 5211
61 Ga0075365_10016068 3300006038 Bacteria 4542
62 Ga0075365_10019065 3300006038 Bacteria 4227
63 Ga0075365_10059178 3300006038 Bacteria 2553
64 Ga0075365_10145246 3300006038 Bacteria 1648
65 Ga0075363_100010275 3300006048 Bacteria 4435
66 Ga0075363_100013694 3300006048 Bacteria 3942
67 Ga0075363_100016931 3300006048 Bacteria 3607
68 Ga0075363_100022542 3300006048 Bacteria 3184
69 Ga0075364_10000108 3300006051 Bacteria 33962
70 Ga0075364_10034256 3300006051 Bacteria 3274
71 Ga0075364_10041627 3300006051 Bacteria 2983
72 Ga0075364_10052621 3300006051 Bacteria 2661
73 Ga0075364_10067408 3300006051 Bacteria 2352
74 Ga0070715_10001598 3300006163 Bacteria 6676
75 Ga0070716_100008831 3300006173 Bacteria 5008
76 Ga0070716_100022007 3300006173 Bacteria 3365
77 Ga0070716_100158430 3300006173 Bacteria 1464
78 Ga0070712_100003709 3300006175 Bacteria 9410
79 Ga0070712_100003761 3300006175 Bacteria 9349
80 Ga0075362_10007509 3300006177 Bacteria 4131
81 Ga0075362_10036012 3300006177 Bacteria 2163
82 Ga0075367_10089574 3300006178 Bacteria 1871
83 Ga0075367_10151840 3300006178 Bacteria 1438
84 Ga0075369_10000160 3300006186 Bacteria 19108
85 Ga0075369_10004199 3300006186 Bacteria 5307
86 Ga0075369_10025276 3300006186 Bacteria 2468
87 Ga0075369_10040686 3300006186 Bacteria 1988
88 Ga0097621_100127158 3300006237 Bacteria 2165
89 Ga0075370_10062075 3300006353 Bacteria 2129
90 Ga0075370_10074817 3300006353 Bacteria 1941
91 Ga0075370_10220390 3300006353 Bacteria 1121
92 Ga0068871_100152434 3300006358 Bacteria 1972
93 Ga0075428_100028818 3300006844 Bacteria 6145
94 Ga0075430_100013145 3300006846 Bacteria 7052
95 Ga0075431_100044683 3300006847 Bacteria 4568
96 Ga0068865_100000866 3300006881 Bacteria 17149
97 Ga0068865_100057501 3300006881 Bacteria 2713
98 Ga0097620_100000860 3300006931 Bacteria 30921
99 Ga0097620_100128072 3300006931 Bacteria 2609
100 Ga0105250_10073713 3300009092 Bacteria 1381
101 Ga0105245_10004512 3300009098 Bacteria 12300
102 Ga0105245_10031345 3300009098 Bacteria 4704
103 Ga0105247_10000167 3300009101 Bacteria 64475
104 Ga0114129_10038293 3300009147 Bacteria 6765
105 Ga0105243_10002394 3300009148 Bacteria 15717
106 Ga0105241_10043988 3300009174 Bacteria 3383
107 Ga0105248_10012423 3300009177 Bacteria 9393
108 Ga0105248_10089564 3300009177 Bacteria 3464
109 Ga0105237_10000454 3300009545 Bacteria 58115
110 Ga0105237_10041105 3300009545 Bacteria 4664
111 Ga0105249_10038582 3300009553 Bacteria 4335
112 Ga0105249_10050405 3300009553 Bacteria 3795
113 Ga0105249_10073162 3300009553 Bacteria 3170
114 Ga0099796_10105305 3300010159 Bacteria 1067
115 Ga0105239_10024180 3300010375 Bacteria 6691
116 Ga0157374_10112677 3300013296 Bacteria 2618
117 Ga0163162_10000963 3300013306 Bacteria 26727
118 Ga0163162_10618002 3300013306 Bacteria 1209
119 Ga0157372_10047974 3300013307 Bacteria 4747
120 Ga0157375_10003089 3300013308 Bacteria 14450
121 Ga0157375_10512917 3300013308 Bacteria 1363
122 Ga0163163_10041618 3300014325 Bacteria 4494
123 Ga0163163_10286528 3300014325 Bacteria 1699
124 Ga0163163_10783437 3300014325 Bacteria 1017
125 Ga0157380_10000382 3300014326 Bacteria 26767
126 Ga0157377_10037922 3300014745 Bacteria 2658
127 Ga0157379_10025962 3300014968 Bacteria 5209
128 Ga0163161_10012136 3300017792 Bacteria 5976
129 Ga0213875_10012546 3300021388 Bacteria 4181
130 Ga0209673_1007343 3300025273 Bacteria 5106
131 Ga0209051_1001047 3300025303 Bacteria 26073
132 Ga0209051_1003728 3300025303 Bacteria 9815
133 Ga0209051_1010480 3300025303 Bacteria 4672
134 Ga0207642_10000966 3300025899 Bacteria 8983
135 Ga0207688_10000366 3300025901 Bacteria 21032
136 Ga0207688_10010069 3300025901 Bacteria 5142
137 Ga0207685_10005198 3300025905 Bacteria 3408
138 Ga0207699_10074539 3300025906 Bacteria 2085
139 Ga0207645_10070749 3300025907 Bacteria 2232
140 Ga0207654_10022040 3300025911 Bacteria 3394
141 Ga0207671_10010703 3300025914 Bacteria 7542
142 Ga0207671_10112737 3300025914 Bacteria 2071
143 Ga0207693_10004062 3300025915 Bacteria 12438
144 Ga0207693_10006926 3300025915 Bacteria 9362
145 Ga0207663_10000247 3300025916 Bacteria 23908
146 Ga0207663_10005404 3300025916 Bacteria 6431
147 Ga0207657_10089080 3300025919 Bacteria 2578
148 Ga0207644_10066609 3300025931 Bacteria 2623
149 Ga0207644_10156064 3300025931 Bacteria 1770
150 Ga0207690_10093703 3300025932 Bacteria 2129
151 Ga0207706_10014203 3300025933 Bacteria 7219
152 Ga0207706_10032584 3300025933 Bacteria 4640
153 Ga0207670_10176694 3300025936 Bacteria 1605
154 Ga0207670_10261621 3300025936 Bacteria 1341
155 Ga0207704_10000254 3300025938 Bacteria 26049
156 Ga0207704_10070178 3300025938 Bacteria 2217
157 Ga0207665_10005292 3300025939 Bacteria 8625
158 Ga0207665_10016188 3300025939 Bacteria 4895
159 Ga0207665_10092710 3300025939 Bacteria 2096
160 Ga0207665_10295157 3300025939 Bacteria 1210
161 Ga0207711_10099692 3300025941 Bacteria 2568
162 Ga0207711_10393449 3300025941 Bacteria 1287
163 Ga0207689_10009590 3300025942 Bacteria 8348
164 Ga0207667_10066386 3300025949 Bacteria 3761
165 Ga0207667_10345491 3300025949 Bacteria 1518
166 Ga0207667_10690883 3300025949 Bacteria 1023
167 Ga0207712_10003771 3300025961 Bacteria 9570
168 Ga0207668_10002367 3300025972 Bacteria 11013
169 Ga0207668_10006320 3300025972 Bacteria 7003
170 Ga0207640_10000692 3300025981 Bacteria 19625
171 Ga0207658_10020110 3300025986 Bacteria 4622
172 Ga0207658_10094365 3300025986 Bacteria 2328
173 Ga0207658_10204823 3300025986 Bacteria 1649
174 Ga0207658_10317035 3300025986 Bacteria 1348
175 Ga0207677_10001530 3300026023 Bacteria 12238
176 Ga0207639_10007319 3300026041 Bacteria 7519
177 Ga0207639_10012971 3300026041 Bacteria 5816
178 Ga0207678_10028456 3300026067 Bacteria 4879
179 Ga0207678_10029690 3300026067 Bacteria 4773
180 Ga0207708_10010339 3300026075 Bacteria 6929
181 Ga0207708_10022863 3300026075 Bacteria 4722
182 Ga0207641_10028339 3300026088 Bacteria 4627
183 Ga0207641_10045871 3300026088 Bacteria 3683
184 Ga0207641_10065168 3300026088 Bacteria 3116
185 Ga0207641_10073491 3300026088 Bacteria 2947
186 Ga0207648_10005387 3300026089 Bacteria 12903
187 Ga0207648_10023253 3300026089 Bacteria 5558
188 Ga0207675_100006662 3300026118 Bacteria 10928
189 Ga0207675_100015685 3300026118 Bacteria 7065
190 Ga0207675_100299030 3300026118 Bacteria 1567
191 Ga0207683_10006048 3300026121 Bacteria 10362
192 Ga0207683_10012189 3300026121 Bacteria 7338
193 Ga0268266_10006151 3300028379 Bacteria 11045
194 Ga0268266_10077604 3300028379 Bacteria 2888
195 Ga0268264_10004035 3300028381 Bacteria 12570
196 Ga0268264_10082512 3300028381 Bacteria 2751
197 Ga0265327_10000610 3300031251 Bacteria 59085
198 Ga0307413_10074441 3300031824 Bacteria 2151
199 Ga0307410_10003379 3300031852 Bacteria 8003
200 Ga0307410_10094605 3300031852 Bacteria 2129
201 Ga0307407_10247873 3300031903 Bacteria 1219
202 Ga0307407_10250995 3300031903 Bacteria 1212
203 Ga0307409_100004747 3300031995 Bacteria 7699
204 Ga0307416_100002031 3300032002 Bacteria 11386
205 Ga0307415_100028356 3300032126 Bacteria 3561
206 Ga0373931_0007404 3300035691 Bacteria 5169
207 Ga0373931_0013116 3300035691 Bacteria 4030
208 Ga0436364_0587460 3300037853 Bacteria 7295
209 Ga0436363_0632985 3300039450 Bacteria 1352
210 Ga0439461_0003079 3300041410 Bacteria 2721
211 Ga0439466_0015083 3300041411 Bacteria 2809
212 Ga0439466_0023887 3300041411 Bacteria 2146
213 Ga0439465_0006010 3300041413 Bacteria 3858
214 Ga0439465_0015018 3300041413 Bacteria 2416
215 Ga0439431_0004845 3300041997 Bacteria 2966
216 Ga0439445_0006652 3300042004 Bacteria 2662
217 Ga0439445_0012233 3300042004 Bacteria 2059
218 Ga0439434_0005346 3300042435 Bacteria 3758
219 Ga0466972_0008413 3300044658 Bacteria 5172
220 Ga0466972_0015975 3300044658 Bacteria 3753
221 Ga0466963_0280041 3300044694 Bacteria 1172
222 Ga0466968_0130521 3300044735 Bacteria 1143
223 Ga0466970_0138831 3300044765 Bacteria 1338
224 Ga0466957_0205521 3300044842 Bacteria 1295
225 Ga0466960_0000442 3300044901 Bacteria 14160
226 Ga0466960_0218267 3300044901 Bacteria 1048
227 Ga0466959_0021995 3300045049 Bacteria 4710
228 Ga0466967_0044534 3300045976 Bacteria 3850
229 Ga0466967_0194827 3300045976 Bacteria 1917
230 Ga0466967_0203726 3300045976 Bacteria 1874
231 Ga0495629_0029075 3300046459 Bacteria 3922
232 Ga0495638_0002890 3300046460 Bacteria 13728
233 Ga0495641_0048785 3300046461 Bacteria 1940
234 Ga0495653_0266088 3300046463 Bacteria 1131
235 Ga0495583_0043048 3300046506 Bacteria 2105
236 Ga0495606_0018830 3300046507 Bacteria 5165
237 Ga0495648_0004000 3300046524 Bacteria 12736
238 Ga0495640_0031446 3300046533 Bacteria 3788
239 Ga0495640_0264952 3300046533 Bacteria 1073
240 Ga0495668_0009701 3300046616 Bacteria 5882
241 Ga0495658_0021370 3300046683 Bacteria 3411
242 Ga0495581_0043214 3300047315 Bacteria 2607
243 Ga0495674_0094431 3300047319 Bacteria 2551
244 Ga0495672_0012195 3300047320 Bacteria 6011
245 Ga0495672_0113910 3300047320 Bacteria 1448
246 Ga0495673_0001110 3300047469 Bacteria 23152
247 Ga0495686_0001467 3300047472 Bacteria 25670
248 Ga0496100_0001264 3300048903 Bacteria 12337
249 Ga0496101_0000008 3300048904 Bacteria 309720
250 Ga0496101_0001780 3300048904 Bacteria 12951
251 Ga0496101_0005184 3300048904 Bacteria 8291
252 Ga0496102_0000005 3300048905 Bacteria 481937
253 Ga0496102_0000956 3300048905 Bacteria 27223
254 Ga0496102_0063437 3300048905 Bacteria 3383
255 Ga0496102_0474324 3300048905 Bacteria 1172
256 Ga0496103_0000002 3300048906 Bacteria 605387
257 Ga0496103_0002583 3300048906 Bacteria 11343
258 Ga0496103_0011447 3300048906 Bacteria 5258
259 Ga0496103_0183515 3300048906 Bacteria 1345
260 Ga0496104_0053084 3300048907 Bacteria 3829
261 Ga0496104_0066368 3300048907 Bacteria 3426
262 Ga0496105_0011799 3300048908 Bacteria 6918
263 Ga0496105_0173201 3300048908 Bacteria 1769
264 Ga0496106_0001322 3300048909 Bacteria 18582
265 Ga0496106_0002190 3300048909 Bacteria 14601
266 Ga0496106_0019547 3300048909 Bacteria 5025
267 Ga0496107_0000615 3300048910 Bacteria 19946
268 Ga0496107_0076433 3300048910 Bacteria 2439
269 Ga0496107_0141784 3300048910 Bacteria 1776
270 Ga0496108_0001016 3300048911 Bacteria 21875
271 Ga0496108_0047356 3300048911 Bacteria 3594
272 Ga0496109_0001998 3300048912 Bacteria 16915
273 Ga0496109_0053371 3300048912 Bacteria 3686
274 Ga0496109_0079409 3300048912 Bacteria 3023
275 Ga0496110_0066864 3300048913 Bacteria 3179
276 Ga0496112_0008539 3300048915 Bacteria 9180
277 Ga0496112_0146583 3300048915 Bacteria 2329
278 Ga0496112_0547726 3300048915 Bacteria 1091
279 Ga0496113_0008743 3300048916 Bacteria 6613
280 Ga0496113_0039591 3300048916 Bacteria 3470
281 Ga0496113_0399865 3300048916 Bacteria 1103
282 Ga0496114_0000431 3300048917 Bacteria 30939
283 Ga0496115_0002689 3300048918 Bacteria 12753
284 Ga0496115_0041280 3300048918 Bacteria 3671
285 Ga0496115_0047497 3300048918 Bacteria 3433
286 Ga0496116_0000034 3300048919 Bacteria 409567
287 Ga0496117_0000003 3300048920 Bacteria 1881097
288 Ga0496118_0000001 3300048921 Bacteria 1881100
289 Ga0496119_0000127 3300048922 Bacteria 107730
290 Ga0496119_0035319 3300048922 Bacteria 3277
291 Ga0496120_0000357 3300048923 Bacteria 75146
292 Ga0496121_0000120 3300048924 Bacteria 174571
293 Ga0496121_0301134 3300048924 Bacteria 1088
294 Ga0496126_0000936 3300048929 Bacteria 50340
295 Ga0501032_0001981 3300049569 Bacteria 16136
296 Ga0501034_0009219 3300049571 Bacteria 10345
297 Ga0501034_0072660 3300049571 Bacteria 3449
298 Ga0501034_0384312 3300049571 Bacteria 1328
299 Ga0501036_0048676 3300049572 Bacteria 3589
300 Ga0501037_0000248 3300049573 Bacteria 46058
301 Ga0501038_0011353 3300049574 Bacteria 8129
302 Ga0501039_0000242 3300049575 Bacteria 39738
303 Ga0501043_0000185 3300049579 Bacteria 56468
304 Ga0501070_0006136 3300049586 Bacteria 10244
305 Ga0501070_0077746 3300049586 Bacteria 2746
306 Ga0501073_0034079 3300049589 Bacteria 3625
307 Ga0501073_0173452 3300049589 Bacteria 1493
308 Ga0501080_0067468 3300049742 Bacteria 3327
309 nmdc:mga03683_40192_c1 3300050489 Bacteria 1917
310 nmdc:mga03n38_11901_c1 3300050490 Bacteria 3256
311 nmdc:mga03n38_250271_c1 3300050490 Bacteria 936
312 nmdc:mga03n38_71371_c1 3300050490 Bacteria 1608
313 nmdc:mga03n38_76840_c1 3300050490 Bacteria 1559
314 nmdc:mga03n38_90930_c1 3300050490 Bacteria 1453
315 nmdc:mga00v17_141694_c1 3300050491 Bacteria 1542
316 nmdc:mga00v17_16932_c1 3300050491 Bacteria 4116
317 nmdc:mga00v17_757_c1 3300050491 Bacteria 17533
318 nmdc:mga0yw44_22903_c1 3300050492 Bacteria 3511
319 nmdc:mga0yw44_276170_c1 3300050492 Bacteria 1122
320 nmdc:mga0yw44_4248_c1 3300050492 Bacteria 6530
321 nmdc:mga0yw44_488451_c1 3300050492 Bacteria 835
322 nmdc:mga06z11_130773_c1 3300050494 Bacteria 1409
323 nmdc:mga07m45_15386_c1 3300050496 Bacteria 4085
324 nmdc:mga07m45_3984_c1 3300050496 Bacteria 7180
325 nmdc:mga0qj67_21589_c1 3300050509 Bacteria 4939
326 nmdc:mga06r32_28403_c1 3300050510 Bacteria 5233
327 nmdc:mga0sz30_180_c2 3300050516 Bacteria 23222
328 nmdc:mga0sz30_46144_c1 3300050516 Bacteria 1839
329 nmdc:mga0sz30_4953_c1 3300050516 Bacteria 4856
330 Ga0500643_004944 3300053087 Bacteria 5861
331 Ga0500643_018201 3300053087 Bacteria 2335
332 Ga0500556_0002771 3300053104 Bacteria 5379
333 Ga0500616_0031145 3300053153 Bacteria 2923
334 Ga0500645_000836 3300053730 Bacteria 18272
335 2644489633 2643221687 Bacteria 6500351
336 2738708350 2738541274 Bacteria 6909446
337 2739334880 2738543028 Bacteria 6917070
338 2842137075 2842134933 Bacteria 5847019
339 2902799327 2902792274 Bacteria 7270173
340 2902842404 2902837492 Bacteria 6697721
341 2929214190 2929212328 Bacteria 7708288
342 2939587949 2939582691 Bacteria 7088898
343 Ga0075369_10000135
344 Ga0055540_1003329
345 Ga0055540_1005645
346 Ga0070689_100020923
347 Ga0070691_10002250
348 Ga0070668_100000634
349 Ga0070668_100009993
350 Ga0070669_100006304
351 Ga0070669_100038154
352 Ga0070671_100014654
353 Ga0070671_100061069
354 Ga0070674_100013458
355 Ga0070674_100044692
356 Ga0070673_100028578
357 Ga0070659_100023392
358 Ga0070667_100031076
359 Ga0070667_100049555
360 Ga0070709_10060489
361 Ga0070709_10166721
362 Ga0070710_10007743
363 Ga0070701_10012778
364 Ga0070711_100003955
365 Ga0070705_100022432
366 Ga0070700_100005385
367 Ga0070694_100170852
368 Ga0070663_100006692
369 Ga0070678_100011767
370 Ga0068867_100004943
371 Ga0070679_100372859
372 Ga0068853_100001555
373 Ga0068853_100019477
374 Ga0070672_100232618
375 Ga0070696_100108897
376 Ga0070693_100010922
377 Ga0070665_100005485
378 Ga0070665_100278454
379 Ga0070665_100498062
380 Ga0070704_100000086
381 Ga0068855_100026241
382 Ga0068855_100354389
383 Ga0068854_100214584
384 Ga0070702_100013433
385 Ga0068859_100000860
386 Ga0068859_100128061
387 Ga0068864_100777139
388 Ga0068866_10000540
389 Ga0068861_100000985
390 Ga0068861_100099262
391 Ga0068863_100009457
392 Ga0068863_100037587
393 Ga0068863_100194606
394 Ga0068858_100002631
395 Ga0068860_100001099
396 Ga0068860_100068317
397 Ga0068862_100002319
398 Ga0068862_100080799
399 Ga0081455_10029582
400 Ga0081455_10036414
401 Ga0075365_10001849
402 Ga0075365_10011473
403 Ga0075365_10016068
404 Ga0075365_10019065
405 Ga0075365_10059178
406 Ga0075365_10145246
407 Ga0075363_100010275
408 Ga0075363_100013694
409 Ga0075363_100016931
410 Ga0075363_100022542
411 Ga0075364_10000108
412 Ga0075364_10034256
413 Ga0075364_10041627
414 Ga0075364_10052621
415 Ga0075364_10067408
416 Ga0070715_10001598
417 Ga0070716_100008831
418 Ga0070716_100022007
419 Ga0070716_100158430
420 Ga0070712_100003709
421 Ga0070712_100003761
422 Ga0075362_10007509
423 Ga0075362_10036012
424 Ga0075367_10089574
425 Ga0075367_10151840
426 Ga0075369_10000160
427 Ga0075369_10004199
428 Ga0075369_10025276
429 Ga0075369_10040686
430 Ga0097621_100127158
431 Ga0075370_10062075
432 Ga0075370_10074817
433 Ga0075370_10220390
434 Ga0068871_100152434
435 Ga0075428_100028818
436 Ga0075430_100013145
437 Ga0075431_100044683
438 Ga0068865_100000866
439 Ga0068865_100057501
440 Ga0097620_100000860
441 Ga0097620_100128072
442 Ga0105250_10073713
443 Ga0105245_10004512
444 Ga0105245_10031345
445 Ga0105247_10000167
446 Ga0114129_10038293
447 Ga0105243_10002394
448 Ga0105241_10043988
449 Ga0105248_10012423
450 Ga0105248_10089564
451 Ga0105237_10000454
452 Ga0105237_10041105
453 Ga0105249_10038582
454 Ga0105249_10050405
455 Ga0105249_10073162
456 Ga0099796_10105305
457 Ga0105239_10024180
458 Ga0157374_10112677
459 Ga0163162_10000963
460 Ga0163162_10618002
461 Ga0157372_10047974
462 Ga0157375_10003089
463 Ga0157375_10512917
464 Ga0163163_10041618
465 Ga0163163_10286528
466 Ga0163163_10783437
467 Ga0157380_10000382
468 Ga0157377_10037922
469 Ga0157379_10025962
470 Ga0163161_10012136
471 Ga0213875_10012546
472 Ga0209673_1007343
473 Ga0209051_1001047
474 Ga0209051_1003728
475 Ga0209051_1010480
476 Ga0207642_10000966
477 Ga0207688_10000366
478 Ga0207688_10010069
479 Ga0207685_10005198
480 Ga0207699_10074539
481 Ga0207645_10070749
482 Ga0207654_10022040
483 Ga0207671_10010703
484 Ga0207671_10112737
485 Ga0207693_10004062
486 Ga0207693_10006926
487 Ga0207663_10000247
488 Ga0207663_10005404
489 Ga0207657_10089080
490 Ga0207644_10066609
491 Ga0207644_10156064
492 Ga0207690_10093703
493 Ga0207706_10014203
494 Ga0207706_10032584
495 Ga0207670_10176694
496 Ga0207670_10261621
497 Ga0207704_10000254
498 Ga0207704_10070178
499 Ga0207665_10005292
500 Ga0207665_10016188
501 Ga0207665_10092710
502 Ga0207665_10295157
503 Ga0207711_10099692
504 Ga0207711_10393449
505 Ga0207689_10009590
506 Ga0207667_10066386
507 Ga0207667_10345491
508 Ga0207667_10690883
509 Ga0207712_10003771
510 Ga0207668_10002367
511 Ga0207668_10006320
512 Ga0207640_10000692
513 Ga0207658_10020110
514 Ga0207658_10094365
515 Ga0207658_10204823
516 Ga0207658_10317035
517 Ga0207677_10001530
518 Ga0207639_10007319
519 Ga0207639_10012971
520 Ga0207678_10028456
521 Ga0207678_10029690
522 Ga0207708_10010339
523 Ga0207708_10022863
524 Ga0207641_10028339
525 Ga0207641_10045871
526 Ga0207641_10065168
527 Ga0207641_10073491
528 Ga0207648_10005387
529 Ga0207648_10023253
530 Ga0207675_100006662
531 Ga0207675_100015685
532 Ga0207675_100299030
533 Ga0207683_10006048
534 Ga0207683_10012189
535 Ga0268266_10006151
536 Ga0268266_10077604
537 Ga0268264_10004035
538 Ga0268264_10082512
539 Ga0265327_10000610
540 Ga0307413_10074441
541 Ga0307410_10003379
542 Ga0307410_10094605
543 Ga0307407_10247873
544 Ga0307407_10250995
545 Ga0307409_100004747
546 Ga0307416_100002031
547 Ga0307415_100028356
548 Ga0373931_0007404
549 Ga0373931_0013116
550 Ga0436364_0587460
551 Ga0436363_0632985
552 Ga0439461_0003079
553 Ga0439466_0015083
554 Ga0439466_0023887
555 Ga0439465_0006010
556 Ga0439465_0015018
557 Ga0439431_0004845
558 Ga0439445_0006652
559 Ga0439445_0012233
560 Ga0439434_0005346
561 Ga0466972_0008413
562 Ga0466972_0015975
563 Ga0466963_0280041
564 Ga0466968_0130521
565 Ga0466970_0138831
566 Ga0466957_0205521
567 Ga0466960_0000442
568 Ga0466960_0218267
569 Ga0466959_0021995
570 Ga0466967_0044534
571 Ga0466967_0194827
572 Ga0466967_0203726
573 Ga0495629_0029075
574 Ga0495638_0002890
575 Ga0495641_0048785
576 Ga0495653_0266088
577 Ga0495583_0043048
578 Ga0495606_0018830
579 Ga0495648_0004000
580 Ga0495640_0031446
581 Ga0495640_0264952
582 Ga0495668_0009701
583 Ga0495658_0021370
584 Ga0495581_0043214
585 Ga0495674_0094431
586 Ga0495672_0012195
587 Ga0495672_0113910
588 Ga0495673_0001110
589 Ga0495686_0001467
590 Ga0496100_0001264
591 Ga0496101_0000008
592 Ga0496101_0001780
593 Ga0496101_0005184
594 Ga0496102_0000005
595 Ga0496102_0000956
596 Ga0496102_0063437
597 Ga0496102_0474324
598 Ga0496103_0000002
599 Ga0496103_0002583
600 Ga0496103_0011447
601 Ga0496103_0183515
602 Ga0496104_0053084
603 Ga0496104_0066368
604 Ga0496105_0011799
605 Ga0496105_0173201
606 Ga0496106_0001322
607 Ga0496106_0002190
608 Ga0496106_0019547
609 Ga0496107_0000615
610 Ga0496107_0076433
611 Ga0496107_0141784
612 Ga0496108_0001016
613 Ga0496108_0047356
614 Ga0496109_0001998
615 Ga0496109_0053371
616 Ga0496109_0079409
617 Ga0496110_0066864
618 Ga0496112_0008539
619 Ga0496112_0146583
620 Ga0496112_0547726
621 Ga0496113_0008743
622 Ga0496113_0039591
623 Ga0496113_0399865
624 Ga0496114_0000431
625 Ga0496115_0002689
626 Ga0496115_0041280
627 Ga0496115_0047497
628 Ga0496116_0000034
629 Ga0496117_0000003
630 Ga0496118_0000001
631 Ga0496119_0000127
632 Ga0496119_0035319
633 Ga0496120_0000357
634 Ga0496121_0000120
635 Ga0496121_0301134
636 Ga0496126_0000936
637 Ga0501032_0001981
638 Ga0501034_0009219
639 Ga0501034_0072660
640 Ga0501034_0384312
641 Ga0501036_0048676
642 Ga0501037_0000248
643 Ga0501038_0011353
644 Ga0501039_0000242
645 Ga0501043_0000185
646 Ga0501070_0006136
647 Ga0501070_0077746
648 Ga0501073_0034079
649 Ga0501073_0173452
650 Ga0501080_0067468
651 nmdc:mga03683_40192_c1
652 nmdc:mga03n38_11901_c1
653 nmdc:mga03n38_250271_c1
654 nmdc:mga03n38_71371_c1
655 nmdc:mga03n38_76840_c1
656 nmdc:mga03n38_90930_c1
657 nmdc:mga00v17_141694_c1
658 nmdc:mga00v17_16932_c1
659 nmdc:mga00v17_757_c1
660 nmdc:mga0yw44_22903_c1
661 nmdc:mga0yw44_276170_c1
662 nmdc:mga0yw44_4248_c1
663 nmdc:mga0yw44_488451_c1
664 nmdc:mga06z11_130773_c1
665 nmdc:mga07m45_15386_c1
666 nmdc:mga07m45_3984_c1
667 nmdc:mga0qj67_21589_c1
668 nmdc:mga06r32_28403_c1
669 nmdc:mga0sz30_180_c2
670 nmdc:mga0sz30_46144_c1
671 nmdc:mga0sz30_4953_c1
672 Ga0500643_004944
673 Ga0500643_018201
674 Ga0500556_0002771
675 Ga0500616_0031145
676 Ga0500645_000836
677 2644489633
678 2738708350
679 2739334880
680 2842137075
681 2902799327
682 2902842404
683 2929214190
684 2939587949

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04321

RmlD_sub_bind

RmlD substrate binding domain

15

299

0.98

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

42

164

0.9

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

41

119

0.88

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

17

222

0.82

PF07993

NAD_binding_4

Male sterility protein

44

191

0.82

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

32

231

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9466 4 285
3sc6-assembly6.cif.gz_F 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9285 1 280
1vl0-assembly1.cif.gz_B crystal structure of a dtdp-4-dehydrorhamnose reductase, rfbd ortholog (ca_c2315) from clostridium acetobutylicum atcc 824 at 2.05 a resolution 0.9269 4 285
3sc6-assembly5.cif.gz_E 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9188 3 281
3sc6-assembly2.cif.gz_B 2.65 angstrom resolution crystal structure of dtdp-4-dehydrorhamnose reductase (rfbd) from bacillus anthracis str. ames in complex with nadp 0.9162 1 286
ID Description Score Start End Superfamily
1vl0B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9067 5 216 3.40.50.720
3sc6D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8941 1 216 3.40.50.720
af_A0A1D6HPY3_156_346_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8766 104 285 3.40.50.720
1kc0A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8751 4 286 3.40.50.720
af_F4JHD7_4_323_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8715 3 286 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7I7UDY4-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9898 1 286 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-K0UW36-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9785 18 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-X8DHC7-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9764 49 285 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-E5XU25-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9735 7 287 GO:0005829
GO:0008831
GO:0019305
GO:0045226
AF-A0A7V9KSM7-F1-model_v4 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) 0.9666 4 149 GO:0005829
GO:0008831
GO:0019305
GO:0045226

Map