F415160

General Info

Members Datasets Scaffolds Average Seq Length
342 273 684 304

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10021336|Ga0157374_100213362
Length 336
Sequence MSLAQASQLLFYPPKRENRAPRKWVIGGSSVMAIVGDAYEYVDKKFYDLTVPIAQLELIFDKCRWSEGPVWFADGGYLIWSDIPNNRLLRWVPDLGVSVFRTPSNFINGNTRDREGRMVSCSHGGRAVYRTEPDGTITTIADRYKGGKLNSPNDVVVKSDGTIWFTDPSYGILSDYEGYKADSEQDGCFVYCFDPATNELKVVADDFKKPNGLAFSPDESTLYISDTGRSHDPDCPAHIRMFDVSGKNNLKNGKVFTDIDSGLSDGFRLDTNGNVWTSAGPGVNVYNPSGALLGRIKTGGAVSNVCFGGARRNRLFITCTEKVFMVDVAASGVQRP

Samples

Sample ID Description Type Environment
1 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
35 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
49 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
50 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
51 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
53 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
56 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
57 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
60 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
61 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
77 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
98 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
104 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
112 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
113 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
114 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
120 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
121 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
122 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
123 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
124 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
125 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
126 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
132 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
133 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
137 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
138 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
146 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
147 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
148 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
149 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
153 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
154 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
161 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
162 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
179 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
180 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
181 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
182 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
183 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
184 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
185 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
186 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
189 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
190 2554235003 Agrobacterium tumefaciens WRT31 Isolate Rhizosphere
191 2558860100 Sinorhizobium sp. PC2 Isolate Nodule
192 2558860242 Agrobacterium fabacearum P4 Isolate Rhizosphere
193 2582581283 Rhizobium sp. OK665 Isolate Rhizosphere
194 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
195 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
196 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
197 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
198 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
199 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
200 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
201 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
202 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
203 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
204 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
205 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
206 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
207 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
208 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
209 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
210 2643221568 Rhizobium sp. Root564 Isolate Unclassified
211 2643221607 Rhizobium sp. Root73 Isolate Unclassified
212 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
213 2643221637 Rhizobium sp. Root1212 Isolate Unclassified
214 2643221686 Rhizobium sp. Root1334 Isolate Unclassified
215 2643221688 Rhizobium sp. Root482 Isolate Unclassified
216 2643221689 Rhizobium sp. Root483D2 Isolate Unclassified
217 2643221693 Rhizobium sp. Root491 Isolate Unclassified
218 2643221718 Rhizobium sp. Root268 Isolate Unclassified
219 2657244999 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
220 2667528174 Rhizobium sp. NFR17 Isolate Rhizoplane
221 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
222 2751185800 Brucella pituitosa AA2 Isolate Unclassified
223 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
224 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
225 2791355091 Sinorhizobium sp. FG01 Isolate Nodule
226 2791355092 Sinorhizobium sp. NG07B Isolate Nodule
227 2791355253 Rhizobium rhizosphaerae RD15 Isolate Rhizosphere
228 2791355267 Rhizobium sp. L18 Isolate Nodule
229 2802429268 Sinorhizobium sojae CCBAU 05684 Isolate Unclassified
230 2808606387 Rhizobium sp. SJZ105 Isolate Rhizosphere
231 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
232 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
233 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
234 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
235 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
236 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
237 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
238 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
239 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
240 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
241 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
242 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
243 2855872281 Sinorhizobium fredii PCH1 Isolate Nodule
244 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
245 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
246 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
247 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
248 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
249 2899803654 Agrobacterium sp. a22-2 Isolate Unclassified
250 2899845264 Agrobacterium fabacearum CNPSo 675 Isolate Unclassified
251 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
252 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
253 2919166419 Agrobacterium cavarae 2074 Isolate Unclassified
254 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
255 2919679072 Pseudotabrizicola sp. 4114 Isolate Unclassified
256 2926760298 Agrobacterium tumefaciens SLBN-170 Isolate Rhizosphere
257 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
258 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
259 2978969890 Agrobacterium sp. SORGH_AS 787 Isolate Unclassified
260 2979089926 Agrobacterium sp. SORGH_AS 745 Isolate Unclassified
261 2979095461 Agrobacterium tumefaciens SORGH_AS 749 Isolate Unclassified
262 2984587000 Agrobacterium larrymoorei SORGH_AS974 Isolate Aerial Root
263 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
264 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
265 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
266 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere
267 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
268 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
269 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
270 8005658619 Rhizobium terrae CC-HIH110 Isolate Unclassified
271 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
272 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule
273 8054558443 Rhizobium alarense TRM95111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.1
Metatranscriptomes 0.29
Isolates 26.61

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 12.57
Nodule 9.65
Rhizoplane 3.22
Rhizosphere 51.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157374_10021336 3300013296 Bacteria 5762
2 JGI25155J39150_1000068 3300002704 Bacteria 65706
3 JGI25156J39149_1000093 3300002705 Bacteria 65706
4 JGI25154J39366_1000116 3300002738 Bacteria 65706
5 JGI25157J39369_1000125 3300002741 Bacteria 65706
6 JGI25152J39213_1004351 3300002773 Bacteria 4488
7 JGI25165J46597_1000163 3300003214 Bacteria 104693
8 JGI25165J46597_1002538 3300003214 Bacteria 5715
9 rootH2_10181513 3300003320 Bacteria 5189
10 rootL2_10005011 3300003322 Bacteria 24978
11 rootH1_10005405 3300003323 Bacteria 5908
12 Ga0055526_1001424 3300003771 Bacteria 17026
13 Ga0055528_1009623 3300003790 Bacteria 4021
14 Ga0070658_10014563 3300005327 Bacteria 6311
15 Ga0070670_100000615 3300005331 Bacteria 27891
16 Ga0070674_100017075 3300005356 Bacteria 4557
17 Ga0070659_100057507 3300005366 Bacteria 3067
18 Ga0070665_100115885 3300005548 Bacteria 2682
19 Ga0068855_100001735 3300005563 Bacteria 27205
20 Ga0068855_100166631 3300005563 Bacteria 2497
21 Ga0068854_100116399 3300005578 Bacteria 2023
22 Ga0068866_10276169 3300005718 Bacteria 1039
23 Ga0068862_100288874 3300005844 Bacteria 1505
24 Ga0068862_100390679 3300005844 Bacteria 1300
25 Ga0081455_10139516 3300005937 Bacteria 1885
26 Ga0081538_10069730 3300005981 Bacteria 1945
27 Ga0075365_10006195 3300006038 Bacteria 6556
28 Ga0075368_10000183 3300006042 Bacteria 17080
29 Ga0075364_10018976 3300006051 Bacteria 4313
30 Ga0075367_10003324 3300006178 Bacteria 7635
31 Ga0075367_10095126 3300006178 Bacteria 1817
32 Ga0075366_10042942 3300006195 Bacteria 2677
33 Ga0075370_10011602 3300006353 Bacteria 4635
34 Ga0075370_10045244 3300006353 Bacteria 2489
35 Ga0075428_100013378 3300006844 Bacteria 9128
36 Ga0075428_100431403 3300006844 Bacteria 1412
37 Ga0075430_100055106 3300006846 Bacteria 3344
38 Ga0075430_100359224 3300006846 Bacteria 1203
39 Ga0075431_100025052 3300006847 Bacteria 6117
40 Ga0075429_100030155 3300006880 Bacteria 4712
41 Ga0079104_1000044 3300006946 Bacteria 185367
42 Ga0099826_10018489 3300006948 Bacteria 5258
43 Ga0105240_10000439 3300009093 Bacteria 76825
44 Ga0105240_10065263 3300009093 Bacteria 4520
45 Ga0111539_10004745 3300009094 Bacteria 17746
46 Ga0111539_10291150 3300009094 Bacteria 1900
47 Ga0111539_10542464 3300009094 Bacteria 1355
48 Ga0114129_10037838 3300009147 Bacteria 6810
49 Ga0114129_10185574 3300009147 Bacteria 2827
50 Ga0114129_10317391 3300009147 Bacteria 2072
51 Ga0105237_10000614 3300009545 Bacteria 49677
52 Ga0105237_10079795 3300009545 Bacteria 3263
53 Ga0105239_10222990 3300010375 Bacteria 2114
54 Ga0105239_10482356 3300010375 Bacteria 1409
55 Ga0157373_10011887 3300013100 Bacteria 6395
56 Ga0157371_10000219 3300013102 Bacteria 83847
57 Ga0157371_10021015 3300013102 Bacteria 4799
58 Ga0157370_10000037 3300013104 Bacteria 136803
59 Ga0157370_10002960 3300013104 Bacteria 20211
60 Ga0157370_10035864 3300013104 Bacteria 4816
61 Ga0157370_10065297 3300013104 Bacteria 3443
62 Ga0157369_10000359 3300013105 Bacteria 60703
63 Ga0157374_10371224 3300013296 Bacteria 1424
64 Ga0157380_10302077 3300014326 Bacteria 1475
65 Ga0182008_10128087 3300014497 Bacteria 1265
66 Ga0182007_10039505 3300015262 Bacteria 1579
67 Ga0214544_1000158 3300021320 Bacteria 101943
68 Ga0214542_1005812 3300021321 Bacteria 23131
69 Ga0214543_1000012 3300021327 Bacteria 338982
70 Ga0214543_1000234 3300021327 Bacteria 84243
71 Ga0224712_10009059 3300022467 Bacteria 2981
72 Ga0209435_100068 3300025206 Bacteria 65762
73 Ga0207427_104081 3300025231 Bacteria 2633
74 Ga0209437_100095 3300025233 Bacteria 236997
75 Ga0209646_1000210 3300025246 Bacteria 65762
76 Ga0209026_1000259 3300025250 Bacteria 65762
77 Ga0209677_101157 3300025253 Bacteria 12235
78 Ga0209148_1000648 3300025254 Bacteria 30118
79 Ga0209759_1000311 3300025256 Bacteria 65762
80 Ga0209233_1000097 3300025261 Bacteria 295452
81 Ga0209233_1000117 3300025261 Bacteria 236984
82 Ga0209233_1000290 3300025261 Bacteria 64394
83 Ga0209455_1000542 3300025272 Bacteria 26113
84 Ga0209673_1019073 3300025273 Bacteria 2474
85 Ga0209130_1019276 3300025284 Bacteria 1584
86 Ga0209025_1043399 3300025294 Bacteria 1895
87 Ga0209564_1003723 3300025295 Bacteria 9997
88 Ga0207705_10000420 3300025909 Bacteria 37140
89 Ga0207705_10002938 3300025909 Bacteria 13025
90 Ga0207695_10000381 3300025913 Bacteria 100821
91 Ga0207671_10001202 3300025914 Bacteria 30798
92 Ga0207660_10493479 3300025917 Bacteria 993
93 Ga0207657_10007073 3300025919 Bacteria 11528
94 Ga0207650_10061393 3300025925 Bacteria 2806
95 Ga0207690_10012221 3300025932 Bacteria 5139
96 Ga0207667_10002032 3300025949 Bacteria 25358
97 Ga0207640_10098766 3300025981 Bacteria 2042
98 Ga0207702_10024696 3300026078 Bacteria 4987
99 Ga0209281_1000129 3300027111 Bacteria 194490
100 Ga0209371_1001536 3300027312 Bacteria 15279
101 Ga0209813_10000258 3300027866 Bacteria 15305
102 Ga0207428_10000107 3300027907 Bacteria 115442
103 Ga0268266_10037298 3300028379 Bacteria 4142
104 Ga0307515_10003222 3300028794 Bacteria 34542
105 Ga0268256_1005806 3300030500 Bacteria 4748
106 Ga0307408_100255920 3300031548 Bacteria 1446
107 Ga0316577_10089710 3300031733 Bacteria 1721
108 Ga0307413_10092163 3300031824 Bacteria 1977
109 Ga0307413_10191285 3300031824 Bacteria 1469
110 Ga0307414_10206916 3300032004 Bacteria 1601
111 Ga0307415_100070824 3300032126 Bacteria 2450
112 Ga0316574_0124263 3300035398 Bacteria 1658
113 Ga0395899_0000008 3300037312 Bacteria 567572
114 Ga0395900_0000273 3300037418 Bacteria 78527
115 Ga0395898_0000072 3300037466 Bacteria 249505
116 Ga0395901_0000003 3300038443 Bacteria 701538
117 Ga0439439_0052917 3300041406 Bacteria 1067
118 Ga0466963_0006925 3300044694 Bacteria 6744
119 Ga0466970_0005992 3300044765 Bacteria 6058
120 Ga0451576_0099603 3300045051 Bacteria 3024
121 Ga0466958_0027402 3300045836 Bacteria 3372
122 Ga0466967_0499594 3300045976 Bacteria 1193
123 Ga0495629_0137541 3300046459 Bacteria 1700
124 Ga0495641_0034331 3300046461 Bacteria 2399
125 Ga0495653_0157108 3300046463 Bacteria 1582
126 Ga0495580_0000008 3300046472 Bacteria 102421
127 Ga0495582_0006791 3300046473 Bacteria 6367
128 Ga0495662_0018295 3300046476 Bacteria 3391
129 Ga0495664_0000815 3300046477 Bacteria 15976
130 Ga0495618_0007873 3300046514 Bacteria 6450
131 Ga0495628_0010950 3300046516 Bacteria 7680
132 Ga0495628_0013165 3300046516 Bacteria 6962
133 Ga0495630_0013871 3300046517 Bacteria 5860
134 Ga0495666_0004048 3300046526 Bacteria 7411
135 Ga0495652_0016992 3300046529 Bacteria 6500
136 Ga0495665_0007756 3300046531 Bacteria 5806
137 Ga0495586_0023642 3300046535 Bacteria 3282
138 Ga0495587_0002905 3300046536 Bacteria 11468
139 Ga0495645_0000604 3300046543 Bacteria 24758
140 Ga0495634_0012563 3300046642 Bacteria 6129
141 Ga0495625_0014417 3300046660 Bacteria 6310
142 Ga0495635_0031112 3300046663 Bacteria 3707
143 Ga0495661_0001487 3300046665 Bacteria 19546
144 Ga0495588_0001121 3300046674 Bacteria 11535
145 Ga0495588_0009769 3300046674 Bacteria 4449
146 Ga0495599_0000157 3300046678 Bacteria 44891
147 Ga0495646_0020144 3300046680 Bacteria 4217
148 Ga0495613_0021330 3300046689 Bacteria 4831
149 Ga0495624_0122803 3300046690 Bacteria 1594
150 Ga0495589_0053633 3300046794 Bacteria 1989
151 Ga0495600_0047403 3300046809 Bacteria 2802
152 Ga0495581_0001553 3300047315 Bacteria 12835
153 Ga0495604_0016957 3300047317 Bacteria 5825
154 Ga0495604_0077686 3300047317 Bacteria 2494
155 Ga0495674_0095771 3300047319 Bacteria 2530
156 Ga0495676_0052170 3300047321 Bacteria 3266
157 Ga0495680_0050219 3300047322 Bacteria 3262
158 Ga0495675_0048506 3300047444 Bacteria 2701
159 Ga0495679_005827 3300047446 Bacteria 5416
160 Ga0495681_0000773 3300047470 Bacteria 24644
161 Ga0495686_0000099 3300047472 Bacteria 180546
162 Ga0495602_0014092 3300048088 Bacteria 8130
163 Ga0495614_0009558 3300048089 Bacteria 4287
164 Ga0496100_0070460 3300048903 Bacteria 2332
165 Ga0496100_0177805 3300048903 Bacteria 1537
166 Ga0496101_0059993 3300048904 Bacteria 2759
167 Ga0496102_0032867 3300048905 Bacteria 4662
168 Ga0496103_0109085 3300048906 Bacteria 1757
169 Ga0496104_0006830 3300048907 Bacteria 10056
170 Ga0496105_0044565 3300048908 Bacteria 3659
171 Ga0496110_0008398 3300048913 Bacteria 8307
172 Ga0496114_0083092 3300048917 Bacteria 2709
173 Ga0496116_0000135 3300048919 Bacteria 153165
174 Ga0496116_0096607 3300048919 Bacteria 1779
175 Ga0496117_0000066 3300048920 Bacteria 253534
176 Ga0496117_0000283 3300048920 Bacteria 94479
177 Ga0496117_0033354 3300048920 Bacteria 3894
178 Ga0496118_0019919 3300048921 Bacteria 5972
179 Ga0496118_0091073 3300048921 Bacteria 2098
180 Ga0496118_0186535 3300048921 Bacteria 1246
181 Ga0496119_0007064 3300048922 Bacteria 10216
182 Ga0496119_0011271 3300048922 Bacteria 7430
183 Ga0496119_0021627 3300048922 Bacteria 4639
184 Ga0496119_0042284 3300048922 Bacteria 2891
185 Ga0496119_0063026 3300048922 Bacteria 2207
186 Ga0496120_0000100 3300048923 Bacteria 143064
187 Ga0496120_0001177 3300048923 Bacteria 33332
188 Ga0496120_0026866 3300048923 Bacteria 3549
189 Ga0496120_0129733 3300048923 Bacteria 1293
190 Ga0496121_0010254 3300048924 Bacteria 10602
191 Ga0496122_0000057 3300048925 Bacteria 253452
192 Ga0496122_0015760 3300048925 Bacteria 7202
193 Ga0496122_0033659 3300048925 Bacteria 4210
194 Ga0496123_0000096 3300048926 Bacteria 173914
195 Ga0496123_0014563 3300048926 Bacteria 6508
196 Ga0496123_0102034 3300048926 Bacteria 1666
197 Ga0496124_0043596 3300048927 Bacteria 3855
198 Ga0496124_0115907 3300048927 Bacteria 2149
199 Ga0496125_0005181 3300048928 Bacteria 14646
200 Ga0496125_0006848 3300048928 Bacteria 12219
201 Ga0496125_0019141 3300048928 Bacteria 6471
202 Ga0496125_0055052 3300048928 Bacteria 3245
203 Ga0496126_0000129 3300048929 Bacteria 174059
204 Ga0496126_0027754 3300048929 Bacteria 5402
205 Ga0496126_0054436 3300048929 Bacteria 3624
206 Ga0496126_0313395 3300048929 Bacteria 1291
207 Ga0496126_0684648 3300048929 Bacteria 799
208 Ga0501032_0179438 3300049569 Bacteria 1387
209 Ga0501033_0164332 3300049570 Bacteria 1597
210 Ga0501033_0210683 3300049570 Bacteria 1386
211 Ga0501036_0065214 3300049572 Bacteria 3083
212 Ga0501048_0238608 3300049582 Bacteria 1290
213 Ga0501071_0445972 3300049587 Bacteria 990
214 Ga0501074_0055773 3300049590 Bacteria 2847
215 Ga0501075_0010168 3300049591 Bacteria 6605
216 Ga0501076_0040648 3300049592 Bacteria 3655
217 Ga0501076_0150756 3300049592 Bacteria 1892
218 Ga0501077_0186763 3300049593 Bacteria 1317
219 Ga0501045_0094988 3300049824 Bacteria 2205
220 nmdc:mga03683_75476_c1 3300050489 Bacteria 1448
221 nmdc:mga03n38_53494_c1 3300050490 Bacteria 1811
222 nmdc:mga00v17_17_c1 3300050491 Bacteria 121949
223 nmdc:mga0yw44_101_c1 3300050492 Bacteria 29987
224 nmdc:mga0k408_64_c1 3300050493 Bacteria 52393
225 nmdc:mga06z11_86523_c1 3300050494 Bacteria 1693
226 nmdc:mga06z11_891_c1 3300050494 Bacteria 10880
227 nmdc:mga07m45_5081_c1 3300050496 Bacteria 6511
228 nmdc:mga05p37_114802_c1 3300050507 Bacteria 3310
229 nmdc:mga05p37_178150_c1 3300050507 Bacteria 2588
230 nmdc:mga05p37_244403_c1 3300050507 Bacteria 2156
231 nmdc:mga09592_30638_c1 3300050508 Bacteria 4476
232 nmdc:mga0qj67_115577_c1 3300050509 Bacteria 2168
233 nmdc:mga0qj67_19005_c1 3300050509 Bacteria 5245
234 nmdc:mga0qj67_204722_c1 3300050509 Bacteria 1603
235 nmdc:mga06r32_277576_c1 3300050510 Bacteria 1663
236 nmdc:mga06r32_3873_c1 3300050510 Bacteria 13398
237 nmdc:mga06r32_88156_c1 3300050510 Bacteria 3029
238 nmdc:mga08y16_16_c1 3300050511 Bacteria 386948
239 nmdc:mga08y16_234199_c1 3300050511 Bacteria 1899
240 nmdc:mga0sz30_5202_c1 3300050516 Bacteria 4763
241 Ga0500560_003557 3300053107 Bacteria 3172
242 Ga0500560_052708 3300053107 Bacteria 1309
243 Ga0500572_003258 3300053111 Bacteria 3738
244 Ga0500618_024765 3300053125 Bacteria 1443
245 Ga0500561_0000038 3300053137 Bacteria 26963
246 Ga0500604_0053473 3300053151 Bacteria 1252
247 Ga0500624_000466 3300053157 Bacteria 12055
248 Ga0500636_0010744 3300053177 Bacteria 5348
249 Ga0590077_009281 3300059426 Bacteria 2015
250 Ga0501082_0036669 3300060353 Bacteria 4223
251 Ga0501082_0223457 3300060353 Bacteria 1639
252 2511135462 2510917022 Bacteria 6504556
253 2512530427 2512047086 Bacteria 6850303
254 2554244931 2554235003 Bacteria 5877155
255 2558865080 2558860100 Bacteria 8458965
256 2559297235 2558860242 Bacteria 5568029
257 2585166613 2582581283 Bacteria 6030556
258 2585267048 2582581306 Bacteria 6450535
259 2585276450 2582581307 Bacteria 6597605
260 2585277547 2582581308 Bacteria 7413247
261 2585328456 2582581315 Bacteria 7318924
262 2585332733 2582581316 Bacteria 7774528
263 2585388089 2582581865 Bacteria 6644329
264 2585536695 2585427527 Bacteria 7273426
265 2585555447 2585427530 Bacteria 7383882
266 2585562947 2585427531 Bacteria 6992870
267 2585901680 2585427608 Bacteria 6544331
268 2585908558 2585427609 Bacteria 6667127
269 2587983978 2585428125 Bacteria 6662905
270 2599718677 2599185236 Bacteria 6875203
271 2616311322 2615840626 Bacteria 7921970
272 2616553194 2615840698 Bacteria 7319877
273 2617385615 2617270742 Bacteria 6808054
274 2643853706 2643221568 Bacteria 5187270
275 2644052331 2643221607 Bacteria 6314006
276 2644201286 2643221636 Bacteria 6583769
277 2644209558 2643221637 Bacteria 5345260
278 2644484609 2643221686 Bacteria 6310811
279 2644494983 2643221688 Bacteria 5260751
280 2644499397 2643221689 Bacteria 6042950
281 2644519744 2643221693 Bacteria 5513853
282 2644653086 2643221718 Bacteria 5345506
283 2657685707 2657244999 Bacteria 5946535
284 2657686222 2657244999 Bacteria 5946535
285 2671115034 2667528174 Bacteria 6435400
286 2692319482 2690316117 Bacteria 6800650
287 2753358038 2751185800 Bacteria 5467370
288 2778177998 2775507266 Bacteria 7392367
289 2792583743 2791355082 Bacteria 5973319
290 2792584545 2791355082 Bacteria 5973319
291 2792624213 2791355091 Bacteria 6135441
292 2792629507 2791355092 Bacteria 6248105
293 2793281801 2791355253 Bacteria 5171699
294 2793369815 2791355267 Bacteria 7222458
295 2804755081 2802429268 Bacteria 6094027
296 2804755634 2802429268 Bacteria 6094027
297 2808988807 2808606387 Bacteria 5697198
298 2819607406 2818991448 Bacteria 6772224
299 2819642308 2818991453 Bacteria 7181617
300 2821127331 2821123053 Bacteria 7836056
301 2838031890 2838029111 Bacteria 6603031
302 2838740525 2838736955 Bacteria 5760694
303 2841846164 2841840854 Bacteria 5761912
304 2842145914 2842140634 Bacteria 5759631
305 2842478622 2842475841 Bacteria 6603183
306 2842486344 2842482326 Bacteria 7212537
307 2842506059 2842502639 Bacteria 6604161
308 2847422016 2847417321 Bacteria 6913799
309 2848996991 2848992105 Bacteria 6810864
310 2855874986 2855872281 Bacteria 6964271
311 2855876246 2855872281 Bacteria 6964271
312 2856291506 2856287931 Bacteria 7223934
313 2857363884 2857357740 Bacteria 9937880
314 2857534688 2857531043 Bacteria 6754041
315 2889790752 2889790730 Bacteria 5689708
316 2889915136 2889914905 Bacteria 5702301
317 2899806867 2899803654 Bacteria 5577784
318 2899850487 2899845264 Bacteria 5672268
319 2913300945 2913295892 Bacteria 6333755
320 2917556424 2917554339 Bacteria 4987857
321 2919168135 2919166419 Bacteria 4952238
322 2919411945 2919408235 Bacteria 6149349
323 2919680253 2919679072 Bacteria 4629602
324 2926764203 2926760298 Bacteria 5505990
325 2928525951 2928521798 Bacteria 4960112
326 2954011965 2954011201 Bacteria 4762601
327 2978970810 2978969890 Bacteria 5400756
328 2979090697 2979089926 Bacteria 5670289
329 2979096221 2979095461 Bacteria 5669583
330 2984587917 2984587000 Bacteria 5263363
331 3003935280 3003930520 Bacteria 5667563
332 3005418173 3005416602 Bacteria 7064308
333 643824074 643692032 Bacteria 6891900
334 650843664 650716007 Bacteria 5573770
335 8005316615 8005314921 Bacteria 7072929
336 8005487320 8005484373 Bacteria 6297373
337 8005651030 8005645114 Bacteria 6950293
338 8005662431 8005658619 Bacteria 4500593
339 8005683410 8005682033 Bacteria 6726518
340 8049297076 8049293176 Bacteria 6128433
341 8049298117 8049293176 Bacteria 6128433
342 8054561441 8054558443 Bacteria 5204801
343 Ga0157374_10021336
344 JGI25155J39150_1000068
345 JGI25156J39149_1000093
346 JGI25154J39366_1000116
347 JGI25157J39369_1000125
348 JGI25152J39213_1004351
349 JGI25165J46597_1000163
350 JGI25165J46597_1002538
351 rootH2_10181513
352 rootL2_10005011
353 rootH1_10005405
354 Ga0055526_1001424
355 Ga0055528_1009623
356 Ga0070658_10014563
357 Ga0070670_100000615
358 Ga0070674_100017075
359 Ga0070659_100057507
360 Ga0070665_100115885
361 Ga0068855_100001735
362 Ga0068855_100166631
363 Ga0068854_100116399
364 Ga0068866_10276169
365 Ga0068862_100288874
366 Ga0068862_100390679
367 Ga0081455_10139516
368 Ga0081538_10069730
369 Ga0075365_10006195
370 Ga0075368_10000183
371 Ga0075364_10018976
372 Ga0075367_10003324
373 Ga0075367_10095126
374 Ga0075366_10042942
375 Ga0075370_10011602
376 Ga0075370_10045244
377 Ga0075428_100013378
378 Ga0075428_100431403
379 Ga0075430_100055106
380 Ga0075430_100359224
381 Ga0075431_100025052
382 Ga0075429_100030155
383 Ga0079104_1000044
384 Ga0099826_10018489
385 Ga0105240_10000439
386 Ga0105240_10065263
387 Ga0111539_10004745
388 Ga0111539_10291150
389 Ga0111539_10542464
390 Ga0114129_10037838
391 Ga0114129_10185574
392 Ga0114129_10317391
393 Ga0105237_10000614
394 Ga0105237_10079795
395 Ga0105239_10222990
396 Ga0105239_10482356
397 Ga0157373_10011887
398 Ga0157371_10000219
399 Ga0157371_10021015
400 Ga0157370_10000037
401 Ga0157370_10002960
402 Ga0157370_10035864
403 Ga0157370_10065297
404 Ga0157369_10000359
405 Ga0157374_10371224
406 Ga0157380_10302077
407 Ga0182008_10128087
408 Ga0182007_10039505
409 Ga0214544_1000158
410 Ga0214542_1005812
411 Ga0214543_1000012
412 Ga0214543_1000234
413 Ga0224712_10009059
414 Ga0209435_100068
415 Ga0207427_104081
416 Ga0209437_100095
417 Ga0209646_1000210
418 Ga0209026_1000259
419 Ga0209677_101157
420 Ga0209148_1000648
421 Ga0209759_1000311
422 Ga0209233_1000097
423 Ga0209233_1000117
424 Ga0209233_1000290
425 Ga0209455_1000542
426 Ga0209673_1019073
427 Ga0209130_1019276
428 Ga0209025_1043399
429 Ga0209564_1003723
430 Ga0207705_10000420
431 Ga0207705_10002938
432 Ga0207695_10000381
433 Ga0207671_10001202
434 Ga0207660_10493479
435 Ga0207657_10007073
436 Ga0207650_10061393
437 Ga0207690_10012221
438 Ga0207667_10002032
439 Ga0207640_10098766
440 Ga0207702_10024696
441 Ga0209281_1000129
442 Ga0209371_1001536
443 Ga0209813_10000258
444 Ga0207428_10000107
445 Ga0268266_10037298
446 Ga0307515_10003222
447 Ga0268256_1005806
448 Ga0307408_100255920
449 Ga0316577_10089710
450 Ga0307413_10092163
451 Ga0307413_10191285
452 Ga0307414_10206916
453 Ga0307415_100070824
454 Ga0316574_0124263
455 Ga0395899_0000008
456 Ga0395900_0000273
457 Ga0395898_0000072
458 Ga0395901_0000003
459 Ga0439439_0052917
460 Ga0466963_0006925
461 Ga0466970_0005992
462 Ga0451576_0099603
463 Ga0466958_0027402
464 Ga0466967_0499594
465 Ga0495629_0137541
466 Ga0495641_0034331
467 Ga0495653_0157108
468 Ga0495580_0000008
469 Ga0495582_0006791
470 Ga0495662_0018295
471 Ga0495664_0000815
472 Ga0495618_0007873
473 Ga0495628_0010950
474 Ga0495628_0013165
475 Ga0495630_0013871
476 Ga0495666_0004048
477 Ga0495652_0016992
478 Ga0495665_0007756
479 Ga0495586_0023642
480 Ga0495587_0002905
481 Ga0495645_0000604
482 Ga0495634_0012563
483 Ga0495625_0014417
484 Ga0495635_0031112
485 Ga0495661_0001487
486 Ga0495588_0001121
487 Ga0495588_0009769
488 Ga0495599_0000157
489 Ga0495646_0020144
490 Ga0495613_0021330
491 Ga0495624_0122803
492 Ga0495589_0053633
493 Ga0495600_0047403
494 Ga0495581_0001553
495 Ga0495604_0016957
496 Ga0495604_0077686
497 Ga0495674_0095771
498 Ga0495676_0052170
499 Ga0495680_0050219
500 Ga0495675_0048506
501 Ga0495679_005827
502 Ga0495681_0000773
503 Ga0495686_0000099
504 Ga0495602_0014092
505 Ga0495614_0009558
506 Ga0496100_0070460
507 Ga0496100_0177805
508 Ga0496101_0059993
509 Ga0496102_0032867
510 Ga0496103_0109085
511 Ga0496104_0006830
512 Ga0496105_0044565
513 Ga0496110_0008398
514 Ga0496114_0083092
515 Ga0496116_0000135
516 Ga0496116_0096607
517 Ga0496117_0000066
518 Ga0496117_0000283
519 Ga0496117_0033354
520 Ga0496118_0019919
521 Ga0496118_0091073
522 Ga0496118_0186535
523 Ga0496119_0007064
524 Ga0496119_0011271
525 Ga0496119_0021627
526 Ga0496119_0042284
527 Ga0496119_0063026
528 Ga0496120_0000100
529 Ga0496120_0001177
530 Ga0496120_0026866
531 Ga0496120_0129733
532 Ga0496121_0010254
533 Ga0496122_0000057
534 Ga0496122_0015760
535 Ga0496122_0033659
536 Ga0496123_0000096
537 Ga0496123_0014563
538 Ga0496123_0102034
539 Ga0496124_0043596
540 Ga0496124_0115907
541 Ga0496125_0005181
542 Ga0496125_0006848
543 Ga0496125_0019141
544 Ga0496125_0055052
545 Ga0496126_0000129
546 Ga0496126_0027754
547 Ga0496126_0054436
548 Ga0496126_0313395
549 Ga0496126_0684648
550 Ga0501032_0179438
551 Ga0501033_0164332
552 Ga0501033_0210683
553 Ga0501036_0065214
554 Ga0501048_0238608
555 Ga0501071_0445972
556 Ga0501074_0055773
557 Ga0501075_0010168
558 Ga0501076_0040648
559 Ga0501076_0150756
560 Ga0501077_0186763
561 Ga0501045_0094988
562 nmdc:mga03683_75476_c1
563 nmdc:mga03n38_53494_c1
564 nmdc:mga00v17_17_c1
565 nmdc:mga0yw44_101_c1
566 nmdc:mga0k408_64_c1
567 nmdc:mga06z11_86523_c1
568 nmdc:mga06z11_891_c1
569 nmdc:mga07m45_5081_c1
570 nmdc:mga05p37_114802_c1
571 nmdc:mga05p37_178150_c1
572 nmdc:mga05p37_244403_c1
573 nmdc:mga09592_30638_c1
574 nmdc:mga0qj67_115577_c1
575 nmdc:mga0qj67_19005_c1
576 nmdc:mga0qj67_204722_c1
577 nmdc:mga06r32_277576_c1
578 nmdc:mga06r32_3873_c1
579 nmdc:mga06r32_88156_c1
580 nmdc:mga08y16_16_c1
581 nmdc:mga08y16_234199_c1
582 nmdc:mga0sz30_5202_c1
583 Ga0500560_003557
584 Ga0500560_052708
585 Ga0500572_003258
586 Ga0500618_024765
587 Ga0500561_0000038
588 Ga0500604_0053473
589 Ga0500624_000466
590 Ga0500636_0010744
591 Ga0590077_009281
592 Ga0501082_0036669
593 Ga0501082_0223457
594 2511135462
595 2512530427
596 2554244931
597 2558865080
598 2559297235
599 2585166613
600 2585267048
601 2585276450
602 2585277547
603 2585328456
604 2585332733
605 2585388089
606 2585536695
607 2585555447
608 2585562947
609 2585901680
610 2585908558
611 2587983978
612 2599718677
613 2616311322
614 2616553194
615 2617385615
616 2643853706
617 2644052331
618 2644201286
619 2644209558
620 2644484609
621 2644494983
622 2644499397
623 2644519744
624 2644653086
625 2657685707
626 2657686222
627 2671115034
628 2692319482
629 2753358038
630 2778177998
631 2792583743
632 2792584545
633 2792624213
634 2792629507
635 2793281801
636 2793369815
637 2804755081
638 2804755634
639 2808988807
640 2819607406
641 2819642308
642 2821127331
643 2838031890
644 2838740525
645 2841846164
646 2842145914
647 2842478622
648 2842486344
649 2842506059
650 2847422016
651 2848996991
652 2855874986
653 2855876246
654 2856291506
655 2857363884
656 2857534688
657 2889790752
658 2889915136
659 2899806867
660 2899850487
661 2913300945
662 2917556424
663 2919168135
664 2919411945
665 2919680253
666 2926764203
667 2928525951
668 2954011965
669 2978970810
670 2979090697
671 2979096221
672 2984587917
673 3003935280
674 3005418173
675 643824074
676 650843664
677 8005316615
678 8005487320
679 8005651030
680 8005662431
681 8005683410
682 8049297076
683 8049298117
684 8054561441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08450

SGL

SMP-30/Gluconolactonase/LRE-like region

65

321

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dr2-assembly1.cif.gz_A structural and functional analyses of xc5397 from xanthomonas campestris: a gluconolactonase important in glucose secondary metabolic pathways 0.9699 9 298
3e5z-assembly2.cif.gz_B x-ray structure of the putative gluconolactonase in protein family pf08450. northeast structural genomics consortium target drr130. 0.9605 9 305
3e5z-assembly2.cif.gz_B x-ray structure of the putative gluconolactonase in protein family pf08450. northeast structural genomics consortium target drr130. 0.9541 9 305
3dr2-assembly1.cif.gz_B structural and functional analyses of xc5397 from xanthomonas campestris: a gluconolactonase important in glucose secondary metabolic pathways 0.954 1 298
3dr2-assembly1.cif.gz_B structural and functional analyses of xc5397 from xanthomonas campestris: a gluconolactonase important in glucose secondary metabolic pathways 0.9194 1 298
ID Description Score Start End Superfamily
3dr2A00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9699 9 298 2.120.10.30
3e5zB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9585 9 305 2.120.10.30
3e5zB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.952 9 305 2.120.10.30
3dr2A00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9096 9 298 2.120.10.30
3wwfC00 Mainly Beta;Beta Barrel;Thrombin, subunit H; 0.8521 77 137 2.40.10.500
ID Description Score Start End GO Terms
AF-A0A175RNA9-F1-model_v4 Gluconolactonase 0.9934 8 302 GO:0016787
GO:0046872
AF-A0A2N5XMP4-F1-model_v4 Gluconolactonase 0.9911 20 302 GO:0016787
GO:0046872
AF-A0A059WGY2-F1-model_v4 SMP-30/Gluconolaconase/LRE-like region 0.9907 27 146 GO:0016787
AF-A0A4Q3GXG1-F1-model_v4 SMP-30/gluconolactonase/LRE family protein 0.9903 120 304 GO:0016787
AF-A0A8B5WNG0-F1-model_v4 SMP-30/gluconolactonase/LRE family protein 0.9902 34 304 GO:0016787
GO:0046872

Map