F415238

General Info

Members Datasets Scaffolds Average Seq Length
342 208 684 317

Family's Representative Sequence

Representative Sequence 3300035119|Ga0373956_0028668|Ga0373956_0028668_189_1313
Length 374
Sequence MRGPRAAIAALRPSPGEPNAVGERTHSPGAALSIGLCAAIVAASVHEPRVLTIVVSSGRGAADAAEALPSGPLEAEHRTLELGLRTWVERQTSQRLGYVEQLYTFGDRDRAMGDAIGDAAPALPALVVAYLALVREAGSGDVDTGDAGPGVAEWRGWYRYFPWEDWREGKPALLEPLEARLKDWAEAAEGDPERRLRAERLGLAFGRHGASWNEELVLERYELLYEAGLVAEAARVPGQPPARAGVPGIGRPAVAVDGGATGVAMASDHRRILATAVGRLRGKIKYRPVVFELMPPAFTLLQLQRTVEALAGVRLHKQNFRRLVEQQGLVEETGAMSAATGGRPARLVRFRREVLLERPTPGLRLRPGRRAAGG

Samples

Sample ID Description Type Environment
1 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
90 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
91 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
92 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
93 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
94 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
95 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
96 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
97 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
101 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
114 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
115 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
130 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
133 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
142 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
143 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
156 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
170 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
171 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
176 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
180 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
185 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
188 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
189 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
190 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
191 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
192 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
194 2508501050 Microvirga lupini Lut6 Isolate Nodule
195 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
196 2643221591 Devosia sp. Root685 Isolate Unclassified
197 2773857925 Microvirga vignae BR3299 Isolate Unclassified
198 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
199 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
200 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
201 2856356410 Mesorhizobium sp. M4B.F.Ca.ET.088.02.2.1 Isolate Nodule
202 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
203 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
204 2885318864 Mesorhizobium sp. M4B.F.Ca.ET.017.02.2.1 Isolate Nodule
205 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
206 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
207 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
208 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.74
Metatranscriptomes 0
Isolates 5.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.51
Nodule 2.05
Rhizoplane 4.09
Rhizosphere 80.99
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373956_0028668 3300035119 Bacteria 2424
2 JGI25151J46595_10001781 3300003187 Bacteria 13938
3 Ga0055526_1009949 3300003771 Bacteria 4496
4 Ga0070666_10005925 3300005335 Bacteria 7505
5 Ga0070680_100001169 3300005336 Bacteria 18852
6 Ga0070691_10003433 3300005341 Bacteria 7120
7 Ga0070671_100175546 3300005355 Bacteria 1813
8 Ga0070709_10000016 3300005434 Bacteria 145008
9 Ga0070709_10009957 3300005434 Bacteria 5255
10 Ga0070709_10046857 3300005434 Bacteria 2690
11 Ga0070713_100000121 3300005436 Bacteria 50650
12 Ga0070713_100237172 3300005436 Bacteria 1660
13 Ga0070711_100008031 3300005439 Bacteria 6442
14 Ga0070708_100160541 3300005445 Bacteria 2094
15 Ga0070681_10000010 3300005458 Bacteria 140126
16 Ga0070681_10049404 3300005458 Bacteria 4201
17 Ga0070681_10290455 3300005458 Bacteria 1545
18 Ga0070707_100456633 3300005468 Bacteria 1238
19 Ga0070698_100090293 3300005471 Bacteria 3047
20 Ga0070699_100054798 3300005518 Bacteria 3452
21 Ga0070699_100107284 3300005518 Bacteria 2450
22 Ga0070679_100000279 3300005530 Bacteria 43122
23 Ga0070697_100039213 3300005536 Bacteria 3829
24 Ga0068853_100012478 3300005539 Bacteria 6913
25 Ga0068853_100024246 3300005539 Bacteria 5084
26 Ga0070695_100008096 3300005545 Bacteria 6229
27 Ga0070693_100021441 3300005547 Bacteria 3423
28 Ga0070665_100091849 3300005548 Bacteria 3041
29 Ga0070665_100392965 3300005548 Bacteria 1395
30 Ga0068855_100051678 3300005563 Bacteria 4841
31 Ga0070664_100059992 3300005564 Bacteria 3238
32 Ga0068857_100000537 3300005577 Bacteria 27471
33 Ga0068856_100000497 3300005614 Bacteria 43608
34 Ga0068856_100002071 3300005614 Bacteria 20793
35 Ga0068852_100003495 3300005616 Bacteria 10988
36 Ga0068852_100004285 3300005616 Bacteria 10064
37 Ga0068852_100109068 3300005616 Bacteria 2513
38 Ga0068852_100169291 3300005616 Bacteria 2046
39 Ga0068851_10204341 3300005834 Bacteria 1104
40 Ga0068858_100162215 3300005842 Bacteria 2105
41 Ga0068858_100183653 3300005842 Bacteria 1975
42 Ga0068858_100350022 3300005842 Bacteria 1415
43 Ga0068860_100001188 3300005843 Bacteria 28462
44 Ga0068860_100057065 3300005843 Bacteria 3711
45 Ga0068862_100283586 3300005844 Bacteria 1519
46 Ga0070717_10195256 3300006028 Bacteria 1770
47 Ga0075363_100147534 3300006048 Bacteria 1327
48 Ga0070716_100055954 3300006173 Bacteria 2260
49 Ga0070712_100000521 3300006175 Bacteria 22155
50 Ga0070712_100002264 3300006175 Bacteria 11844
51 Ga0070712_100041973 3300006175 Bacteria 3144
52 Ga0070712_100058962 3300006175 Bacteria 2702
53 Ga0068871_100034965 3300006358 Bacteria 3990
54 Ga0068871_100166385 3300006358 Bacteria 1888
55 Ga0075436_100000714 3300006914 Bacteria 21999
56 Ga0075436_100004350 3300006914 Bacteria 9722
57 Ga0075435_100025592 3300007076 Bacteria 4595
58 Ga0075435_100079481 3300007076 Bacteria 2691
59 Ga0099795_10016400 3300007788 Bacteria 2342
60 Ga0105240_10000641 3300009093 Bacteria 64500
61 Ga0105240_10002917 3300009093 Bacteria 26979
62 Ga0105240_10129627 3300009093 Bacteria 3027
63 Ga0105247_10018009 3300009101 Bacteria 4237
64 Ga0105247_10207285 3300009101 Bacteria 1320
65 Ga0105241_10016145 3300009174 Bacteria 5474
66 Ga0105241_10055541 3300009174 Bacteria 3034
67 Ga0105241_10095127 3300009174 Bacteria 2358
68 Ga0105242_10137156 3300009176 Bacteria 2119
69 Ga0105248_10000001 3300009177 Bacteria 1881304
70 Ga0105237_10001469 3300009545 Bacteria 31060
71 Ga0105237_10143390 3300009545 Bacteria 2383
72 Ga0105238_10000888 3300009551 Bacteria 30776
73 Ga0105238_10001905 3300009551 Bacteria 20957
74 Ga0105238_10113849 3300009551 Bacteria 2685
75 Ga0105238_10341882 3300009551 Bacteria 1485
76 Ga0105249_10163621 3300009553 Bacteria 2152
77 Ga0099796_10016964 3300010159 Bacteria 2160
78 Ga0099796_10071070 3300010159 Bacteria 1257
79 Ga0105239_10007283 3300010375 Bacteria 12705
80 Ga0105239_10008109 3300010375 Bacteria 11989
81 Ga0105239_10068039 3300010375 Bacteria 3913
82 Ga0105239_10134910 3300010375 Bacteria 2748
83 Ga0157373_10011775 3300013100 Bacteria 6425
84 Ga0157370_10003994 3300013104 Bacteria 17143
85 Ga0157369_10004137 3300013105 Bacteria 17184
86 Ga0157369_10069017 3300013105 Bacteria 3797
87 Ga0157369_10100091 3300013105 Bacteria 3090
88 Ga0163162_10448093 3300013306 Bacteria 1423
89 Ga0157372_10003180 3300013307 Bacteria 17711
90 Ga0157372_10015069 3300013307 Bacteria 8275
91 Ga0157372_10122821 3300013307 Bacteria 2984
92 Ga0157380_10069267 3300014326 Bacteria 2846
93 Ga0157379_10020606 3300014968 Bacteria 5833
94 Ga0157379_10077581 3300014968 Bacteria 2975
95 Ga0157376_10173293 3300014969 Bacteria 1966
96 Ga0183365_10003 3300015684 Bacteria 414944
97 Ga0213872_10014635 3300021361 Bacteria 3657
98 Ga0213876_10000474 3300021384 Bacteria 32008
99 Ga0213876_10001866 3300021384 Bacteria 12684
100 Ga0213875_10000081 3300021388 Bacteria 114181
101 Ga0209025_1000053 3300025294 Bacteria 317600
102 Ga0209758_1014389 3300025297 Bacteria 4212
103 Ga0207680_10003210 3300025903 Bacteria 7692
104 Ga0207699_10000027 3300025906 Bacteria 152171
105 Ga0207699_10000981 3300025906 Bacteria 13569
106 Ga0207699_10010807 3300025906 Bacteria 4594
107 Ga0207684_10061022 3300025910 Bacteria 3202
108 Ga0207707_10000005 3300025912 Bacteria 382024
109 Ga0207707_10150634 3300025912 Bacteria 2034
110 Ga0207707_10255395 3300025912 Bacteria 1522
111 Ga0207695_10000018 3300025913 Bacteria 766611
112 Ga0207695_10032430 3300025913 Bacteria 5716
113 Ga0207671_10152578 3300025914 Bacteria 1785
114 Ga0207693_10000396 3300025915 Bacteria 40060
115 Ga0207693_10001440 3300025915 Bacteria 21095
116 Ga0207693_10041613 3300025915 Bacteria 3617
117 Ga0207663_10028099 3300025916 Bacteria 3288
118 Ga0207660_10000459 3300025917 Bacteria 26877
119 Ga0207649_10056220 3300025920 Bacteria 2456
120 Ga0207652_10000068 3300025921 Bacteria 110287
121 Ga0207646_10016658 3300025922 Bacteria 6893
122 Ga0207694_10000018 3300025924 Bacteria 331281
123 Ga0207694_10022881 3300025924 Bacteria 4741
124 Ga0207694_10137836 3300025924 Bacteria 1961
125 Ga0207694_10246871 3300025924 Bacteria 1460
126 Ga0207700_10000055 3300025928 Bacteria 71870
127 Ga0207700_10039675 3300025928 Bacteria 3430
128 Ga0207700_10126923 3300025928 Bacteria 2077
129 Ga0207700_10131487 3300025928 Bacteria 2044
130 Ga0207664_10116202 3300025929 Bacteria 2232
131 Ga0207686_10197654 3300025934 Bacteria 1438
132 Ga0207665_10045333 3300025939 Bacteria 2944
133 Ga0207665_10061166 3300025939 Bacteria 2552
134 Ga0207665_10074351 3300025939 Bacteria 2326
135 Ga0207711_10000002 3300025941 Bacteria 1228676
136 Ga0207667_10000052 3300025949 Bacteria 232415
137 Ga0207667_10003925 3300025949 Bacteria 18295
138 Ga0207703_10150799 3300026035 Bacteria 2027
139 Ga0207703_10215895 3300026035 Bacteria 1713
140 Ga0207703_10302646 3300026035 Bacteria 1459
141 Ga0207639_10001575 3300026041 Bacteria 15297
142 Ga0207639_10054102 3300026041 Bacteria 3066
143 Ga0207702_10000193 3300026078 Bacteria 72492
144 Ga0207702_10047034 3300026078 Bacteria 3634
145 Ga0207674_10000003 3300026116 Bacteria 241674
146 Ga0207698_10012659 3300026142 Bacteria 5530
147 Ga0207698_10016159 3300026142 Bacteria 5023
148 Ga0207698_10087335 3300026142 Bacteria 2540
149 Ga0268265_10034188 3300028380 Bacteria 3703
150 Ga0268264_10001084 3300028381 Bacteria 26936
151 Ga0268264_10062732 3300028381 Bacteria 3122
152 Ga0265318_10000817 3300028577 Bacteria 20523
153 Ga0265338_10000005 3300028800 Bacteria 571137
154 Ga0265338_10005398 3300028800 Bacteria 16693
155 Ga0265338_10211722 3300028800 Bacteria 1454
156 Ga0265330_10002239 3300031235 Bacteria 10657
157 Ga0265332_10046995 3300031238 Bacteria 1858
158 Ga0265328_10053859 3300031239 Bacteria 1476
159 Ga0265320_10000448 3300031240 Bacteria 32305
160 Ga0265325_10000010 3300031241 Bacteria 172391
161 Ga0265325_10009439 3300031241 Bacteria 5693
162 Ga0265325_10055307 3300031241 Bacteria 2029
163 Ga0265325_10060050 3300031241 Bacteria 1933
164 Ga0265325_10106040 3300031241 Bacteria 1371
165 Ga0265329_10046520 3300031242 Bacteria 1386
166 Ga0265340_10000172 3300031247 Bacteria 32521
167 Ga0265340_10003553 3300031247 Bacteria 8774
168 Ga0265340_10011503 3300031247 Bacteria 4703
169 Ga0265340_10021595 3300031247 Bacteria 3301
170 Ga0265339_10001891 3300031249 Bacteria 15349
171 Ga0265339_10003451 3300031249 Bacteria 11058
172 Ga0265339_10031477 3300031249 Bacteria 2997
173 Ga0265339_10038784 3300031249 Bacteria 2655
174 Ga0265331_10000106 3300031250 Bacteria 113406
175 Ga0265331_10001437 3300031250 Bacteria 17486
176 Ga0265316_10009734 3300031344 Bacteria 8825
177 Ga0265316_10063156 3300031344 Bacteria 2872
178 Ga0265316_10088335 3300031344 Bacteria 2367
179 Ga0265316_10099847 3300031344 Bacteria 2207
180 Ga0265313_10004566 3300031595 Bacteria 10543
181 Ga0265313_10006469 3300031595 Bacteria 8281
182 Ga0265313_10020586 3300031595 Bacteria 3636
183 Ga0307508_10006944 3300031616 Bacteria 10566
184 Ga0265314_10000810 3300031711 Bacteria 37131
185 Ga0265314_10010334 3300031711 Bacteria 7795
186 Ga0265314_10024658 3300031711 Bacteria 4555
187 Ga0265314_10035842 3300031711 Bacteria 3613
188 Ga0265314_10129750 3300031711 Bacteria 1575
189 Ga0265314_10131685 3300031711 Bacteria 1559
190 Ga0265314_10160358 3300031711 Bacteria 1369
191 Ga0265314_10191922 3300031711 Bacteria 1215
192 Ga0265342_10009699 3300031712 Bacteria 6749
193 Ga0265342_10050577 3300031712 Bacteria 2482
194 Ga0265342_10076034 3300031712 Bacteria 1947
195 Ga0265342_10104184 3300031712 Bacteria 1612
196 Ga0265342_10119907 3300031712 Bacteria 1482
197 Ga0316576_10019141 3300031727 Bacteria 4688
198 Ga0307410_10139805 3300031852 Bacteria 1790
199 Ga0307409_100024339 3300031995 Bacteria 4221
200 Ga0307416_100431961 3300032002 Bacteria 1364
201 Ga0307414_10118682 3300032004 Bacteria 2029
202 Ga0307411_10291173 3300032005 Bacteria 1305
203 Ga0307415_100428433 3300032126 Bacteria 1137
204 Ga0307510_10175069 3300033180 Bacteria 1718
205 Ga0373929_0008512 3300035085 Bacteria 1892
206 Ga0373934_0030180 3300035086 Bacteria 2120
207 Ga0373945_0055358 3300035116 Bacteria 1468
208 Ga0373943_0000678 3300035170 Bacteria 14828
209 Ga0373931_0023693 3300035691 Bacteria 3101
210 Ga0373935_0168246 3300035692 Bacteria 1498
211 Ga0373927_0033542 3300035695 Bacteria 3343
212 Ga0373927_0268603 3300035695 Bacteria 1122
213 Ga0373947_0010149 3300035725 Bacteria 5408
214 Ga0373937_0006681 3300036401 Bacteria 9961
215 Ga0373937_0034343 3300036401 Bacteria 4613
216 Ga0373937_0188271 3300036401 Bacteria 1939
217 Ga0373925_0001280 3300037068 Bacteria 22177
218 Ga0373925_0036434 3300037068 Bacteria 3631
219 Ga0373925_0175098 3300037068 Bacteria 1695
220 Ga0436364_0560002 3300037853 Bacteria 93566
221 Ga0436364_1443133 3300037853 Bacteria 3126
222 Ga0395901_0659145 3300038443 Bacteria 1049
223 Ga0436365_0336982 3300039437 Bacteria 5275
224 Ga0436365_0643609 3300039437 Bacteria 115180
225 Ga0436365_1765689 3300039437 Bacteria 2909
226 Ga0436365_1809337 3300039437 Bacteria 2287
227 Ga0436365_1849791 3300039437 Bacteria 109940
228 Ga0436360_0044645 3300039438 Bacteria 5471
229 Ga0436360_0330004 3300039438 Bacteria 1928
230 Ga0436360_0804712 3300039438 Bacteria 4883
231 Ga0436361_0483815 3300039447 Bacteria 2785
232 Ga0436361_0655546 3300039447 Bacteria 1355
233 Ga0436361_0805306 3300039447 Bacteria 3569
234 Ga0436361_1076528 3300039447 Bacteria 1358
235 Ga0436363_0073611 3300039450 Bacteria 996
236 Ga0436363_0932088 3300039450 Bacteria 1359
237 Ga0436363_1235715 3300039450 Bacteria 5773
238 Ga0436362_0161615 3300039453 Bacteria 9239
239 Ga0436362_1210609 3300039453 Bacteria 2449
240 Ga0436362_1249579 3300039453 Bacteria 2033
241 Ga0466963_0182546 3300044694 Bacteria 1465
242 Ga0495592_0043339 3300046454 Bacteria 3367
243 Ga0495580_0008585 3300046472 Bacteria 8107
244 Ga0495633_0009532 3300046558 Bacteria 5353
245 Ga0495647_0069310 3300046681 Bacteria 1409
246 Ga0495613_0030433 3300046689 Bacteria 4010
247 Ga0495672_0004379 3300047320 Bacteria 11598
248 Ga0495602_0114970 3300048088 Bacteria 2178
249 Ga0496100_0028263 3300048903 Bacteria 3458
250 Ga0496101_0101890 3300048904 Bacteria 2150
251 Ga0496102_0111348 3300048905 Bacteria 2552
252 Ga0496104_0033043 3300048907 Bacteria 4816
253 Ga0496105_0052906 3300048908 Bacteria 3353
254 Ga0496106_0543974 3300048909 Bacteria 932
255 Ga0496107_0184721 3300048910 Bacteria 1548
256 Ga0496108_0035365 3300048911 Bacteria 4152
257 Ga0496109_0174930 3300048912 Bacteria 2015
258 Ga0496110_0087676 3300048913 Bacteria 2779
259 Ga0496111_0053337 3300048914 Bacteria 2921
260 Ga0496113_0007509 3300048916 Bacteria 7025
261 Ga0496114_0000060 3300048917 Bacteria 90143
262 Ga0496114_0071270 3300048917 Bacteria 2920
263 Ga0496119_0001636 3300048922 Bacteria 26397
264 Ga0496121_0198766 3300048924 Bacteria 1431
265 Ga0496122_0001189 3300048925 Bacteria 44564
266 Ga0496122_0009273 3300048925 Bacteria 10405
267 Ga0496123_0001203 3300048926 Bacteria 37856
268 Ga0496123_0007533 3300048926 Bacteria 10207
269 Ga0496126_0007207 3300048929 Bacteria 12233
270 Ga0496126_0231293 3300048929 Bacteria 1549
271 Ga0495682_0003915 3300049460 Bacteria 6501
272 Ga0501031_0113400 3300049568 Bacteria 1770
273 Ga0501031_0144188 3300049568 Bacteria 1556
274 Ga0501032_0000001 3300049569 Bacteria 422097
275 Ga0501033_0000198 3300049570 Bacteria 57365
276 Ga0501034_0000036 3300049571 Bacteria 239274
277 Ga0501034_0153344 3300049571 Bacteria 2279
278 Ga0501034_0205245 3300049571 Bacteria 1927
279 Ga0501036_0000046 3300049572 Bacteria 76444
280 Ga0501037_0000017 3300049573 Bacteria 157276
281 Ga0501038_0000153 3300049574 Bacteria 59196
282 Ga0501039_0000011 3300049575 Bacteria 245124
283 Ga0501040_0148656 3300049576 Bacteria 1652
284 Ga0501043_0000016 3300049579 Bacteria 170869
285 Ga0501043_0242088 3300049579 Bacteria 1391
286 Ga0501046_0119532 3300049580 Bacteria 2006
287 Ga0501046_0199079 3300049580 Bacteria 1491
288 Ga0501047_0062004 3300049581 Bacteria 3608
289 Ga0501047_0429803 3300049581 Bacteria 1151
290 Ga0501067_0003288 3300049583 Bacteria 8896
291 Ga0501069_0033658 3300049585 Bacteria 2823
292 Ga0501070_0012096 3300049586 Bacteria 7283
293 Ga0501070_0035614 3300049586 Bacteria 4159
294 Ga0501070_0151819 3300049586 Bacteria 1911
295 Ga0501072_0060280 3300049588 Bacteria 2992
296 Ga0501072_0116643 3300049588 Bacteria 2127
297 Ga0501073_0007763 3300049589 Bacteria 7967
298 Ga0501074_0005664 3300049590 Bacteria 9002
299 Ga0501079_0103331 3300049741 Bacteria 2210
300 Ga0501080_0025745 3300049742 Bacteria 5464
301 Ga0501035_0000028 3300049822 Bacteria 179195
302 Ga0501035_0011157 3300049822 Bacteria 8319
303 Ga0501035_0016541 3300049822 Bacteria 6800
304 Ga0501044_0003716 3300049823 Bacteria 17148
305 Ga0501044_0319113 3300049823 Bacteria 1478
306 nmdc:mga03n38_142464_c1 3300050490 Bacteria 1198
307 nmdc:mga0n895_176784_c1 3300050512 Bacteria 2165
308 nmdc:mga0rr50_19684_c1 3300050513 Bacteria 4562
309 nmdc:mga0rr50_76517_c1 3300050513 Bacteria 2569
310 nmdc:mga08x19_12826_c1 3300050514 Bacteria 5054
311 nmdc:mga08x19_89_c1 3300050514 Bacteria 82051
312 Ga0495601_0017951 3300053077 Bacteria 4301
313 Ga0500635_0000956 3300053080 Bacteria 6945
314 Ga0495595_0041082 3300053084 Bacteria 2115
315 Ga0495595_0047662 3300053084 Bacteria 1977
316 Ga0495619_0008923 3300053085 Bacteria 6330
317 Ga0495619_0041583 3300053085 Bacteria 3007
318 Ga0500651_0010136 3300053093 Bacteria 5634
319 Ga0500556_0001028 3300053104 Bacteria 14579
320 Ga0500608_000043 3300053122 Bacteria 56214
321 Ga0500559_0000002 3300053136 Bacteria 262002
322 Ga0500622_0001215 3300053156 Bacteria 21197
323 Ga0501084_0000016 3300054114 Bacteria 155919
324 Ga0501082_0383262 3300060353 Bacteria 1227
325 2508725667 2508501050 Bacteria 9633614
326 2509073437 2508501114 Bacteria 7082538
327 2643964146 2643221591 Bacteria 4397626
328 2774872632 2773857925 Bacteria 6472445
329 2776264117 2775506901 Bacteria 9631051
330 2776264652 2775506901 Bacteria 9631051
331 2829746110 2829745981 Bacteria 5406054
332 2835313535 2835312727 Bacteria 7413381
333 2835314551 2835312727 Bacteria 7413381
334 2856364100 2856356410 Bacteria 6297484
335 2861692493 2861691609 Bacteria 5628931
336 2882462533 2882456835 Bacteria 6863978
337 2882462812 2882456835 Bacteria 6863978
338 2885324572 2885318864 Bacteria 6729568
339 2894237914 2894232714 Bacteria 8834183
340 2928975271 2928972540 Bacteria 3058286
341 2977241735 2977240413 Bacteria 3191065
342 8001850513 8001845381 Bacteria 5804942
343 Ga0373956_0028668
344 JGI25151J46595_10001781
345 Ga0055526_1009949
346 Ga0070666_10005925
347 Ga0070680_100001169
348 Ga0070691_10003433
349 Ga0070671_100175546
350 Ga0070709_10000016
351 Ga0070709_10009957
352 Ga0070709_10046857
353 Ga0070713_100000121
354 Ga0070713_100237172
355 Ga0070711_100008031
356 Ga0070708_100160541
357 Ga0070681_10000010
358 Ga0070681_10049404
359 Ga0070681_10290455
360 Ga0070707_100456633
361 Ga0070698_100090293
362 Ga0070699_100054798
363 Ga0070699_100107284
364 Ga0070679_100000279
365 Ga0070697_100039213
366 Ga0068853_100012478
367 Ga0068853_100024246
368 Ga0070695_100008096
369 Ga0070693_100021441
370 Ga0070665_100091849
371 Ga0070665_100392965
372 Ga0068855_100051678
373 Ga0070664_100059992
374 Ga0068857_100000537
375 Ga0068856_100000497
376 Ga0068856_100002071
377 Ga0068852_100003495
378 Ga0068852_100004285
379 Ga0068852_100109068
380 Ga0068852_100169291
381 Ga0068851_10204341
382 Ga0068858_100162215
383 Ga0068858_100183653
384 Ga0068858_100350022
385 Ga0068860_100001188
386 Ga0068860_100057065
387 Ga0068862_100283586
388 Ga0070717_10195256
389 Ga0075363_100147534
390 Ga0070716_100055954
391 Ga0070712_100000521
392 Ga0070712_100002264
393 Ga0070712_100041973
394 Ga0070712_100058962
395 Ga0068871_100034965
396 Ga0068871_100166385
397 Ga0075436_100000714
398 Ga0075436_100004350
399 Ga0075435_100025592
400 Ga0075435_100079481
401 Ga0099795_10016400
402 Ga0105240_10000641
403 Ga0105240_10002917
404 Ga0105240_10129627
405 Ga0105247_10018009
406 Ga0105247_10207285
407 Ga0105241_10016145
408 Ga0105241_10055541
409 Ga0105241_10095127
410 Ga0105242_10137156
411 Ga0105248_10000001
412 Ga0105237_10001469
413 Ga0105237_10143390
414 Ga0105238_10000888
415 Ga0105238_10001905
416 Ga0105238_10113849
417 Ga0105238_10341882
418 Ga0105249_10163621
419 Ga0099796_10016964
420 Ga0099796_10071070
421 Ga0105239_10007283
422 Ga0105239_10008109
423 Ga0105239_10068039
424 Ga0105239_10134910
425 Ga0157373_10011775
426 Ga0157370_10003994
427 Ga0157369_10004137
428 Ga0157369_10069017
429 Ga0157369_10100091
430 Ga0163162_10448093
431 Ga0157372_10003180
432 Ga0157372_10015069
433 Ga0157372_10122821
434 Ga0157380_10069267
435 Ga0157379_10020606
436 Ga0157379_10077581
437 Ga0157376_10173293
438 Ga0183365_10003
439 Ga0213872_10014635
440 Ga0213876_10000474
441 Ga0213876_10001866
442 Ga0213875_10000081
443 Ga0209025_1000053
444 Ga0209758_1014389
445 Ga0207680_10003210
446 Ga0207699_10000027
447 Ga0207699_10000981
448 Ga0207699_10010807
449 Ga0207684_10061022
450 Ga0207707_10000005
451 Ga0207707_10150634
452 Ga0207707_10255395
453 Ga0207695_10000018
454 Ga0207695_10032430
455 Ga0207671_10152578
456 Ga0207693_10000396
457 Ga0207693_10001440
458 Ga0207693_10041613
459 Ga0207663_10028099
460 Ga0207660_10000459
461 Ga0207649_10056220
462 Ga0207652_10000068
463 Ga0207646_10016658
464 Ga0207694_10000018
465 Ga0207694_10022881
466 Ga0207694_10137836
467 Ga0207694_10246871
468 Ga0207700_10000055
469 Ga0207700_10039675
470 Ga0207700_10126923
471 Ga0207700_10131487
472 Ga0207664_10116202
473 Ga0207686_10197654
474 Ga0207665_10045333
475 Ga0207665_10061166
476 Ga0207665_10074351
477 Ga0207711_10000002
478 Ga0207667_10000052
479 Ga0207667_10003925
480 Ga0207703_10150799
481 Ga0207703_10215895
482 Ga0207703_10302646
483 Ga0207639_10001575
484 Ga0207639_10054102
485 Ga0207702_10000193
486 Ga0207702_10047034
487 Ga0207674_10000003
488 Ga0207698_10012659
489 Ga0207698_10016159
490 Ga0207698_10087335
491 Ga0268265_10034188
492 Ga0268264_10001084
493 Ga0268264_10062732
494 Ga0265318_10000817
495 Ga0265338_10000005
496 Ga0265338_10005398
497 Ga0265338_10211722
498 Ga0265330_10002239
499 Ga0265332_10046995
500 Ga0265328_10053859
501 Ga0265320_10000448
502 Ga0265325_10000010
503 Ga0265325_10009439
504 Ga0265325_10055307
505 Ga0265325_10060050
506 Ga0265325_10106040
507 Ga0265329_10046520
508 Ga0265340_10000172
509 Ga0265340_10003553
510 Ga0265340_10011503
511 Ga0265340_10021595
512 Ga0265339_10001891
513 Ga0265339_10003451
514 Ga0265339_10031477
515 Ga0265339_10038784
516 Ga0265331_10000106
517 Ga0265331_10001437
518 Ga0265316_10009734
519 Ga0265316_10063156
520 Ga0265316_10088335
521 Ga0265316_10099847
522 Ga0265313_10004566
523 Ga0265313_10006469
524 Ga0265313_10020586
525 Ga0307508_10006944
526 Ga0265314_10000810
527 Ga0265314_10010334
528 Ga0265314_10024658
529 Ga0265314_10035842
530 Ga0265314_10129750
531 Ga0265314_10131685
532 Ga0265314_10160358
533 Ga0265314_10191922
534 Ga0265342_10009699
535 Ga0265342_10050577
536 Ga0265342_10076034
537 Ga0265342_10104184
538 Ga0265342_10119907
539 Ga0316576_10019141
540 Ga0307410_10139805
541 Ga0307409_100024339
542 Ga0307416_100431961
543 Ga0307414_10118682
544 Ga0307411_10291173
545 Ga0307415_100428433
546 Ga0307510_10175069
547 Ga0373929_0008512
548 Ga0373934_0030180
549 Ga0373945_0055358
550 Ga0373943_0000678
551 Ga0373931_0023693
552 Ga0373935_0168246
553 Ga0373927_0033542
554 Ga0373927_0268603
555 Ga0373947_0010149
556 Ga0373937_0006681
557 Ga0373937_0034343
558 Ga0373937_0188271
559 Ga0373925_0001280
560 Ga0373925_0036434
561 Ga0373925_0175098
562 Ga0436364_0560002
563 Ga0436364_1443133
564 Ga0395901_0659145
565 Ga0436365_0336982
566 Ga0436365_0643609
567 Ga0436365_1765689
568 Ga0436365_1809337
569 Ga0436365_1849791
570 Ga0436360_0044645
571 Ga0436360_0330004
572 Ga0436360_0804712
573 Ga0436361_0483815
574 Ga0436361_0655546
575 Ga0436361_0805306
576 Ga0436361_1076528
577 Ga0436363_0073611
578 Ga0436363_0932088
579 Ga0436363_1235715
580 Ga0436362_0161615
581 Ga0436362_1210609
582 Ga0436362_1249579
583 Ga0466963_0182546
584 Ga0495592_0043339
585 Ga0495580_0008585
586 Ga0495633_0009532
587 Ga0495647_0069310
588 Ga0495613_0030433
589 Ga0495672_0004379
590 Ga0495602_0114970
591 Ga0496100_0028263
592 Ga0496101_0101890
593 Ga0496102_0111348
594 Ga0496104_0033043
595 Ga0496105_0052906
596 Ga0496106_0543974
597 Ga0496107_0184721
598 Ga0496108_0035365
599 Ga0496109_0174930
600 Ga0496110_0087676
601 Ga0496111_0053337
602 Ga0496113_0007509
603 Ga0496114_0000060
604 Ga0496114_0071270
605 Ga0496119_0001636
606 Ga0496121_0198766
607 Ga0496122_0001189
608 Ga0496122_0009273
609 Ga0496123_0001203
610 Ga0496123_0007533
611 Ga0496126_0007207
612 Ga0496126_0231293
613 Ga0495682_0003915
614 Ga0501031_0113400
615 Ga0501031_0144188
616 Ga0501032_0000001
617 Ga0501033_0000198
618 Ga0501034_0000036
619 Ga0501034_0153344
620 Ga0501034_0205245
621 Ga0501036_0000046
622 Ga0501037_0000017
623 Ga0501038_0000153
624 Ga0501039_0000011
625 Ga0501040_0148656
626 Ga0501043_0000016
627 Ga0501043_0242088
628 Ga0501046_0119532
629 Ga0501046_0199079
630 Ga0501047_0062004
631 Ga0501047_0429803
632 Ga0501067_0003288
633 Ga0501069_0033658
634 Ga0501070_0012096
635 Ga0501070_0035614
636 Ga0501070_0151819
637 Ga0501072_0060280
638 Ga0501072_0116643
639 Ga0501073_0007763
640 Ga0501074_0005664
641 Ga0501079_0103331
642 Ga0501080_0025745
643 Ga0501035_0000028
644 Ga0501035_0011157
645 Ga0501035_0016541
646 Ga0501044_0003716
647 Ga0501044_0319113
648 nmdc:mga03n38_142464_c1
649 nmdc:mga0n895_176784_c1
650 nmdc:mga0rr50_19684_c1
651 nmdc:mga0rr50_76517_c1
652 nmdc:mga08x19_12826_c1
653 nmdc:mga08x19_89_c1
654 Ga0495601_0017951
655 Ga0500635_0000956
656 Ga0495595_0041082
657 Ga0495595_0047662
658 Ga0495619_0008923
659 Ga0495619_0041583
660 Ga0500651_0010136
661 Ga0500556_0001028
662 Ga0500608_000043
663 Ga0500559_0000002
664 Ga0500622_0001215
665 Ga0501084_0000016
666 Ga0501082_0383262
667 2508725667
668 2509073437
669 2643964146
670 2774872632
671 2776264117
672 2776264652
673 2829746110
674 2835313535
675 2835314551
676 2856364100
677 2861692493
678 2882462533
679 2882462812
680 2885324572
681 2894237914
682 2928975271
683 2977241735
684 8001850513

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21906

NrtR_WHD

NrtR DNA-binding winged helix domain

290

350

0.98

PF19368

AraR_C

AraR C-terminal winged HTH domain

286

359

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kyx-assembly1.cif.gz_B crystal structure of adp-ribose pyrophosphatase mutt from rickettsia felis 0.857 22 112
5bs6-assembly2.cif.gz_D apo structure of transcriptional factor arar from bacteroides thetaiotaomicron vpi 0.8484 23 300
5bs6-assembly1.cif.gz_B apo structure of transcriptional factor arar from bacteroides thetaiotaomicron vpi 0.8477 23 300
3a6v-assembly3.cif.gz_A crystal structure of the mutt protein in mn(ii) bound holo form 0.81 23 128
3a6v-assembly3.cif.gz_B crystal structure of the mutt protein in mn(ii) bound holo form 0.8087 23 128
ID Description Score Start End Superfamily
3gz5A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9067 230 299 1.10.10.10
3gz5B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9037 230 299 1.10.10.10
af_O06597_151_228_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8726 230 291 1.10.10.10
2fb1D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8583 223 300 1.10.10.10
4kyxB00 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.857 22 112 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A2U0A9F5-F1-model_v4 NUDIX hydrolase 0.9663 209 291 GO:0016787
AF-G1Y1Q9-F1-model_v4 deleted 0.9608 231 298
AF-A0A7W1A657-F1-model_v4 NUDIX hydrolase 0.9504 205 293 GO:0016787
AF-A0A5C8SZQ3-F1-model_v4 NUDIX hydrolase 0.9462 202 292 GO:0016787
AF-A0A535T545-F1-model_v4 NUDIX hydrolase 0.9349 202 297 GO:0016787

Map