F415272

General Info

Members Datasets Scaffolds Average Seq Length
342 217 684 511

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0078097|Ga0451577_0078097_1037_2887
Length 602
Sequence MNWMEKLVTLTMPEHDISHCAEKPFAGESHFLWDNYWIFLSRKKISRRSIRNFFADFRRSADFMMSLHLRKSKLILLKQVMTTFRYGIDRLTPGVALGIGRGSIRADITTETVSRIQKNRADVDQIVADKKIVYGINTGFGPLCTTLISDEDTRRLQHNLLLSHAVGVGDDIPLEISRLMMILKVHSLAMGYSGISLATISRICWHIENNVIPCVPSQGSVGASGDLAPLAHLFLPLIGYGRVHYQGHIVSGKEFLASAGLPPLELGPKEGLALINGTQFIAAHAVQFIERFQNCLDHADIIAAMNLEAMLGSVKAFDPDLHALRPYEGSQYVAERMRILTSGSEIVESHRNCSRVQDPYSLRCIPQVHGASRNAFLHLKQLLITELNSVTDNPIVFSSDKSISGGNFHGQLLALPLDYAALATAELGNIADRRIYLSLMDTIEGLPKLLMKETGLNSGFMIPQYTTAALVSENKSLCFPASADSIPTSLGQEDHVSMGSISARKALQVAGNLEKILGIELFCAAQGFDFRKPLKSSPLINACHDQIRKTIPHIDQDVYLGDYIASAIQMVQQHELTELTSSVALEKHIEFKNGTHEIFGIY

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
7 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
8 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
11 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
14 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
17 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
22 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
28 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
29 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
48 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
49 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
52 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
53 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
54 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
60 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
61 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
88 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
94 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
95 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
96 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
97 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
98 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
102 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
103 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
106 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
107 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
108 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
109 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
110 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
111 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
112 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
113 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
114 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
117 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
118 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
119 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
120 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
121 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
122 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
123 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
124 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
125 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
126 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
127 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
128 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
132 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
133 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
134 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
141 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
142 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
143 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
144 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
145 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
148 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
149 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
150 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
151 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
152 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
153 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
154 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
155 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
156 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
157 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
158 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
159 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
160 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
161 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
162 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
163 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
164 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
165 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
166 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
167 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
168 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
169 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
170 2738541283 Pedobacter sp. OK701 Isolate Unclassified
171 2738541302 Pedobacter sp. CF074 Isolate Unclassified
172 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
173 2738543023 Pedobacter sp. OK628 Isolate Unclassified
174 2739367651 Pedobacter sp. OK291 Isolate Unclassified
175 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
176 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
177 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
178 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
179 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
180 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
181 2818991437 Pedobacter terrae 518 Isolate Unclassified
182 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
183 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
184 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
185 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
186 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
187 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
188 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
189 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
190 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
191 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
192 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
193 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
194 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
195 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
196 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
197 2914759650 Rhizosphaericola mali Isolate Rhizosphere
198 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
199 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
200 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
201 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
202 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
203 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
204 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
205 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
206 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
207 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
208 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
209 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
210 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
211 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
212 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
213 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
214 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
215 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
216 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
217 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.24
Metatranscriptomes 0
Isolates 20.76

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 8.77
Nodule 0.29
Rhizoplane 0.58
Rhizosphere 73.68
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0078097 3300042876 Bacteria 2952
2 SwRhRL2b_contig_1139619 2162886007 Bacteria 1882
3 JGI24739J22299_10003039 3300001989 Bacteria 6406
4 JGI24739J22299_10005446 3300001989 Bacteria 4836
5 JGI24735J21928_10000003 3300002067 Bacteria 385983
6 JGI25162J39368_1000158 3300002737 Bacteria 74916
7 JGI25152J39213_1000257 3300002773 Bacteria 35294
8 JGI25150J39212_1000025 3300002774 Bacteria 123597
9 JGI25151J46595_10000089 3300003187 Bacteria 123597
10 JGI25165J46597_1000621 3300003214 Bacteria 29774
11 JGI25153J46596_10000079 3300003215 Bacteria 113263
12 rootH1_10019188 3300003316 Bacteria 26527
13 rootH1_10048991 3300003316 Bacteria 3096
14 rootH2_10000984 3300003320 Bacteria 89440
15 rootH2_10042190 3300003320 Bacteria 2413
16 rootH2_10170042 3300003320 Bacteria 3203
17 rootL2_10084996 3300003322 Bacteria 3495
18 rootH1_10050560 3300003323 Bacteria 2039
19 rootH1_10255591 3300003323 Bacteria 2295
20 Ga0055536_1000006 3300003781 Bacteria 347733
21 Ga0065714_10005588 3300005288 Bacteria 9018
22 Ga0065714_10007063 3300005288 Bacteria 7635
23 Ga0065714_10064606 3300005288 Bacteria 29406
24 Ga0065714_10065201 3300005288 Bacteria 12006
25 Ga0065714_10078398 3300005288 Bacteria 2599
26 Ga0065714_10084151 3300005288 Bacteria 2204
27 Ga0065714_10084709 3300005288 Bacteria 2184
28 Ga0065704_10083346 3300005289 Bacteria 3478
29 Ga0070658_10000635 3300005327 Bacteria 30331
30 Ga0070683_100002128 3300005329 Bacteria 15640
31 Ga0070682_100011426 3300005337 Bacteria 5073
32 Ga0070668_100047285 3300005347 Bacteria 3308
33 Ga0070671_100009095 3300005355 Bacteria 7973
34 Ga0070662_100000053 3300005457 Bacteria 61062
35 Ga0070662_100151678 3300005457 Bacteria 1805
36 Ga0070684_100000979 3300005535 Bacteria 20363
37 Ga0068855_100000185 3300005563 Bacteria 79849
38 Ga0068855_100000286 3300005563 Bacteria 62438
39 Ga0068855_100000501 3300005563 Bacteria 48446
40 Ga0068855_100072836 3300005563 Bacteria 3993
41 Ga0068856_100000095 3300005614 Bacteria 84075
42 Ga0068856_100086985 3300005614 Bacteria 3106
43 Ga0075366_10000305 3300006195 Bacteria 22220
44 Ga0075366_10042857 3300006195 Bacteria 2680
45 Ga0105244_10000018 3300009036 Bacteria 244992
46 Ga0105250_10008920 3300009092 Bacteria 4242
47 Ga0105240_10000892 3300009093 Bacteria 53531
48 Ga0105240_10002687 3300009093 Bacteria 28319
49 Ga0105240_10002786 3300009093 Bacteria 27633
50 Ga0105240_10003529 3300009093 Bacteria 24265
51 Ga0105240_10074465 3300009093 Bacteria 4191
52 Ga0105240_10092017 3300009093 Bacteria 3704
53 Ga0105245_10085867 3300009098 Bacteria 2885
54 Ga0105243_10000008 3300009148 Bacteria 390270
55 Ga0105243_10000089 3300009148 Bacteria 103761
56 Ga0105241_10009402 3300009174 Bacteria 7182
57 Ga0105241_10028655 3300009174 Bacteria 4149
58 Ga0105237_10000400 3300009545 Bacteria 61626
59 Ga0105237_10002087 3300009545 Bacteria 25279
60 Ga0105237_10007167 3300009545 Bacteria 12250
61 Ga0105237_10011014 3300009545 Bacteria 9594
62 Ga0105237_10012888 3300009545 Bacteria 8786
63 Ga0105237_10031940 3300009545 Bacteria 5332
64 Ga0105249_10008513 3300009553 Bacteria 8943
65 Ga0105249_10015743 3300009553 Bacteria 6697
66 Ga0105239_10000009 3300010375 Bacteria 361182
67 Ga0105239_10000278 3300010375 Bacteria 75485
68 Ga0105239_10007160 3300010375 Bacteria 12837
69 Ga0105239_10021966 3300010375 Bacteria 7033
70 Ga0105239_10024404 3300010375 Bacteria 6662
71 Ga0105246_10081869 3300011119 Bacteria 2302
72 Ga0157373_10000067 3300013100 Bacteria 92618
73 Ga0157373_10025665 3300013100 Bacteria 4260
74 Ga0157371_10000291 3300013102 Bacteria 67813
75 Ga0157371_10000296 3300013102 Bacteria 66267
76 Ga0157371_10041155 3300013102 Bacteria 3298
77 Ga0157370_10000389 3300013104 Bacteria 55069
78 Ga0157370_10006323 3300013104 Bacteria 13087
79 Ga0157370_10008185 3300013104 Bacteria 11301
80 Ga0157370_10021434 3300013104 Bacteria 6439
81 Ga0157370_10028732 3300013104 Bacteria 5468
82 Ga0157370_10036387 3300013104 Bacteria 4776
83 Ga0157369_10000140 3300013105 Bacteria 102632
84 Ga0157369_10000164 3300013105 Bacteria 94229
85 Ga0157374_10060919 3300013296 Bacteria 3533
86 Ga0163162_10000005 3300013306 Bacteria 447195
87 Ga0163162_10000065 3300013306 Bacteria 102191
88 Ga0163162_10036606 3300013306 Bacteria 4893
89 Ga0157372_10000514 3300013307 Bacteria 42626
90 Ga0157372_10052030 3300013307 Bacteria 4559
91 Ga0157375_10004654 3300013308 Bacteria 11930
92 Ga0182008_10000016 3300014497 Bacteria 241246
93 Ga0182008_10000167 3300014497 Bacteria 51397
94 Ga0182008_10000980 3300014497 Bacteria 19812
95 Ga0182006_1000194 3300015261 Bacteria 62654
96 Ga0182006_1000324 3300015261 Bacteria 41463
97 Ga0182007_10000005 3300015262 Bacteria 442702
98 Ga0183373_1002 3300015682 Bacteria 990153
99 Ga0163161_10000135 3300017792 Bacteria 69859
100 Ga0163161_10000479 3300017792 Bacteria 32921
101 Ga0163161_10002668 3300017792 Bacteria 12677
102 Ga0163161_10045823 3300017792 Bacteria 3155
103 Ga0207427_100376 3300025231 Bacteria 27182
104 Ga0209437_100048 3300025233 Bacteria 405107
105 Ga0209437_100280 3300025233 Bacteria 74968
106 Ga0207425_1000008 3300025245 Bacteria 618024
107 Ga0209129_1000042 3300025258 Bacteria 305537
108 Ga0209233_1000029 3300025261 Bacteria 641642
109 Ga0209233_1019666 3300025261 Bacteria 1789
110 Ga0209455_1002242 3300025272 Bacteria 7606
111 Ga0209675_1000159 3300025291 Bacteria 87316
112 Ga0209676_1000039 3300025292 Bacteria 443158
113 Ga0209025_1000020 3300025294 Bacteria 618024
114 Ga0209758_1000022 3300025297 Bacteria 618024
115 Ga0209050_1000033 3300025298 Bacteria 442615
116 Ga0207655_1000058 3300025728 Bacteria 267656
117 Ga0207647_10000752 3300025904 Bacteria 25389
118 Ga0207647_10000988 3300025904 Bacteria 22050
119 Ga0207705_10000636 3300025909 Bacteria 29355
120 Ga0207695_10000267 3300025913 Bacteria 131133
121 Ga0207695_10000390 3300025913 Bacteria 99095
122 Ga0207695_10082143 3300025913 Bacteria 3259
123 Ga0207695_10135279 3300025913 Bacteria 2418
124 Ga0207671_10004100 3300025914 Bacteria 14098
125 Ga0207671_10004658 3300025914 Bacteria 12986
126 Ga0207671_10006520 3300025914 Bacteria 10372
127 Ga0207671_10007195 3300025914 Bacteria 9697
128 Ga0207671_10081135 3300025914 Bacteria 2432
129 Ga0207644_10031382 3300025931 Bacteria 3701
130 Ga0207690_10046475 3300025932 Bacteria 2876
131 Ga0207706_10000444 3300025933 Bacteria 44162
132 Ga0207709_10000006 3300025935 Bacteria 800946
133 Ga0207709_10000136 3300025935 Bacteria 106728
134 Ga0207661_10034481 3300025944 Bacteria 3936
135 Ga0207661_10043038 3300025944 Bacteria 3563
136 Ga0207667_10000136 3300025949 Bacteria 111470
137 Ga0207667_10000204 3300025949 Bacteria 84991
138 Ga0207667_10000754 3300025949 Bacteria 42027
139 Ga0207667_10081929 3300025949 Bacteria 3343
140 Ga0207712_10042520 3300025961 Bacteria 3129
141 Ga0207678_10126346 3300026067 Bacteria 2181
142 Ga0207702_10006023 3300026078 Bacteria 10523
143 Ga0207702_10190801 3300026078 Bacteria 1893
144 Ga0307517_10014235 3300028786 Bacteria 10711
145 Ga0307515_10001098 3300028794 Bacteria 62024
146 Ga0307515_10002118 3300028794 Bacteria 43514
147 Ga0307509_10032255 3300031507 Bacteria 5773
148 Ga0307408_100000839 3300031548 Bacteria 24299
149 Ga0307408_100002335 3300031548 Bacteria 13423
150 Ga0316578_10008161 3300031728 Bacteria 5309
151 Ga0307405_10000094 3300031731 Bacteria 37829
152 Ga0307407_10000001 3300031903 Bacteria 570048
153 Ga0307412_10000640 3300031911 Bacteria 20375
154 Ga0307412_10001858 3300031911 Bacteria 11683
155 Ga0307412_10002518 3300031911 Bacteria 10189
156 Ga0307416_100000020 3300032002 Bacteria 192862
157 Ga0307416_100000026 3300032002 Bacteria 172622
158 Ga0307414_10000049 3300032004 Bacteria 130090
159 Ga0307414_10000153 3300032004 Bacteria 46402
160 Ga0307414_10000890 3300032004 Bacteria 15271
161 Ga0307414_10010157 3300032004 Bacteria 5448
162 Ga0307414_10029350 3300032004 Bacteria 3579
163 Ga0307507_10004880 3300033179 Bacteria 22985
164 Ga0307510_10000714 3300033180 Bacteria 34043
165 Ga0316584_0003823 3300036712 Bacteria 9867
166 Ga0316584_0010651 3300036712 Bacteria 6437
167 Ga0395899_0000050 3300037312 Bacteria 224591
168 Ga0395899_0004143 3300037312 Bacteria 11394
169 Ga0395900_0000139 3300037418 Bacteria 122708
170 Ga0395900_0003170 3300037418 Bacteria 17833
171 Ga0395905_0003831 3300037471 Bacteria 15891
172 Ga0395901_0004810 3300038443 Bacteria 13624
173 Ga0400490_57304 3300038726 Bacteria 5779
174 Ga0400483_190368 3300039062 Bacteria 7189
175 Ga0400489_01000 3300039093 Unclassified 1971
176 Ga0439465_0000815 3300041413 Bacteria 9815
177 Ga0439445_0002424 3300042004 Bacteria 4149
178 Ga0451577_0000030 3300042876 Bacteria 391423
179 Ga0451577_0000856 3300042876 Bacteria 45342
180 Ga0451577_0136270 3300042876 Bacteria 2205
181 Ga0453683_0000307 3300044673 Bacteria 61515
182 Ga0453684_0000256 3300044712 Bacteria 228862
183 Ga0453684_0000260 3300044712 Bacteria 227076
184 Ga0453684_0000876 3300044712 Bacteria 100878
185 Ga0453684_0005074 3300044712 Bacteria 26601
186 Ga0453684_0005484 3300044712 Bacteria 25091
187 Ga0453684_0032507 3300044712 Bacteria 7300
188 Ga0453684_0255590 3300044712 Unclassified 2009
189 Ga0451576_0000103 3300045051 Bacteria 217967
190 Ga0451576_0000633 3300045051 Bacteria 73095
191 Ga0451576_0031911 3300045051 Bacteria 5614
192 Ga0451576_0036489 3300045051 Bacteria 5210
193 Ga0495627_000029 3300046453 Bacteria 232349
194 Ga0495590_0001263 3300046457 Bacteria 11018
195 Ga0495638_0025376 3300046460 Bacteria 3854
196 Ga0495650_0000107 3300046471 Bacteria 200864
197 Ga0495585_0000014 3300046492 Bacteria 187513
198 Ga0495585_0004514 3300046492 Bacteria 9019
199 Ga0495596_0000534 3300046500 Bacteria 23908
200 Ga0495583_0006417 3300046506 Bacteria 7696
201 Ga0495606_0000303 3300046507 Bacteria 84874
202 Ga0495606_0006741 3300046507 Bacteria 10513
203 Ga0495606_0008687 3300046507 Bacteria 8751
204 Ga0495606_0011609 3300046507 Bacteria 7161
205 Ga0495606_0015014 3300046507 Bacteria 6001
206 Ga0495610_0000001 3300046512 Bacteria 1620061
207 Ga0495610_0000048 3300046512 Bacteria 150249
208 Ga0495610_0000367 3300046512 Bacteria 46922
209 Ga0495610_0003081 3300046512 Bacteria 13312
210 Ga0495616_0002195 3300046513 Bacteria 13047
211 Ga0495631_0008313 3300046518 Bacteria 5230
212 Ga0495637_0026235 3300046520 Bacteria 2618
213 Ga0495643_0014078 3300046522 Bacteria 4769
214 Ga0495644_0012973 3300046523 Bacteria 3203
215 Ga0495648_0006357 3300046524 Bacteria 9657
216 Ga0495648_0061916 3300046524 Bacteria 2219
217 Ga0495663_0000243 3300046525 Bacteria 21677
218 Ga0495654_0000008 3300046530 Bacteria 398340
219 Ga0495654_0094855 3300046530 Bacteria 1380
220 Ga0495609_0000010 3300046538 Bacteria 342605
221 Ga0495609_0009311 3300046538 Bacteria 4758
222 Ga0495622_0006876 3300046557 Bacteria 5281
223 Ga0495633_0000015 3300046558 Bacteria 254484
224 Ga0495633_0000163 3300046558 Bacteria 87285
225 Ga0495668_0000010 3300046616 Bacteria 487308
226 Ga0495625_0000021 3300046660 Bacteria 282133
227 Ga0495625_0002809 3300046660 Bacteria 18347
228 Ga0495625_0002922 3300046660 Bacteria 17849
229 Ga0495625_0003409 3300046660 Bacteria 15897
230 Ga0495625_0005748 3300046660 Bacteria 11212
231 Ga0495625_0009153 3300046660 Bacteria 8328
232 Ga0495625_0018640 3300046660 Bacteria 5409
233 Ga0495661_0001335 3300046665 Bacteria 20928
234 Ga0495671_0035342 3300046692 Bacteria 2538
235 Ga0495649_0000009 3300046694 Bacteria 451725
236 Ga0495660_0009954 3300046810 Bacteria 5534
237 Ga0495687_030648 3300047443 Bacteria 2475
238 Ga0495687_032961 3300047443 Bacteria 2357
239 Ga0495677_0011031 3300047445 Bacteria 3311
240 Ga0495686_0000153 3300047472 Bacteria 133256
241 Ga0495686_0001677 3300047472 Bacteria 23025
242 Ga0495686_0021695 3300047472 Bacteria 4260
243 Ga0496105_0084771 3300048908 Bacteria 2618
244 Ga0496116_0000037 3300048919 Bacteria 374675
245 Ga0496117_0000086 3300048920 Bacteria 212331
246 Ga0496117_0003552 3300048920 Bacteria 17994
247 Ga0496118_0000284 3300048921 Bacteria 88966
248 Ga0496119_0000037 3300048922 Bacteria 210912
249 Ga0496122_0000389 3300048925 Bacteria 93538
250 Ga0496122_0000489 3300048925 Bacteria 82241
251 Ga0496122_0001909 3300048925 Bacteria 31508
252 Ga0496122_0002275 3300048925 Bacteria 27795
253 Ga0496122_0015412 3300048925 Bacteria 7308
254 Ga0496122_0022721 3300048925 Bacteria 5564
255 Ga0496122_0025245 3300048925 Bacteria 5167
256 Ga0496123_0000739 3300048926 Bacteria 52947
257 Ga0496123_0014387 3300048926 Bacteria 6563
258 Ga0496124_0006053 3300048927 Bacteria 13321
259 Ga0496125_0000685 3300048928 Bacteria 56407
260 Ga0496125_0009248 3300048928 Bacteria 10176
261 Ga0496126_0002873 3300048929 Bacteria 22479
262 Ga0501241_000009 3300049758 Bacteria 128695
263 Ga0501269_000196 3300049766 Bacteria 18180
264 nmdc:mga0k408_52310_c1 3300050493 Bacteria 2367
265 nmdc:mga0k408_74_c2 3300050493 Bacteria 20737
266 Ga0500608_003670 3300053122 Bacteria 5803
267 Ga0500618_000057 3300053125 Bacteria 98383
268 Ga0500618_009287 3300053125 Bacteria 2691
269 Ga0500642_0025900 3300053130 Bacteria 2388
270 Ga0500622_0001792 3300053156 Bacteria 16380
271 Ga0500624_001370 3300053157 Bacteria 4081
272 2511233549 2511231000 Bacteria 4488346
273 2585142361 2582581278 Bacteria 5296881
274 2585159302 2582581281 Bacteria 4487904
275 2585163562 2582581282 Bacteria 4495830
276 2585426715 2582581873 Bacteria 3032664
277 2586209346 2585427687 Bacteria 5544917
278 2587680718 2585428045 Bacteria 5203023
279 2587748836 2585428060 Bacteria 5304711
280 2587752727 2585428061 Bacteria 3939663
281 2587868549 2585428095 Bacteria 3789702
282 2588211829 2585428182 Bacteria 5007281
283 2588216503 2585428183 Bacteria 5166119
284 2588217297 2585428184 Bacteria 4978681
285 2588220587 2585428184 Bacteria 4978681
286 2588225873 2585428185 Bacteria 4969476
287 2588230937 2585428187 Bacteria 4629388
288 2588447772 2588253712 Bacteria 5403181
289 2590603684 2588254255 Bacteria 5014294
290 2590610417 2588254257 Bacteria 5436094
291 2599479658 2599185184 Bacteria 6430550
292 2722728573 2721755487 Bacteria 6357185
293 2729202546 2728369107 Bacteria 5082720
294 2738699625 2738541273 Bacteria 4048577
295 2738756381 2738541283 Bacteria 7222293
296 2738855036 2738541302 Bacteria 5944758
297 2739253374 2738543014 Bacteria 4048139
298 2739300026 2738543023 Bacteria 6767879
299 2739586858 2739367651 Bacteria 6359826
300 2740060644 2739367874 Bacteria 4872888
301 2753675030 2751185877 Bacteria 4921427
302 2765575907 2765235839 Bacteria 5314748
303 2772606618 2772190705 Bacteria 4666226
304 2775674135 2775506739 Bacteria 3855222
305 2816875617 2816332188 Bacteria 5133218
306 2819547314 2818991437 Bacteria 5805520
307 2833640450 2833640130 Bacteria 4858325
308 2842087780 2842083920 Bacteria 4857652
309 2842727701 2842722452 Bacteria 6263924
310 2842911095 2842909656 Bacteria 6185908
311 2849283048 2849281842 Bacteria 6065644
312 2852627129 2852623160 Bacteria 4376875
313 2852629863 2852627209 Bacteria 5896285
314 2871724832 2871720351 Bacteria 4862476
315 2884636278 2884634485 Bacteria 3928637
316 2884935935 2884933994 Bacteria 4535041
317 2889293600 2889290771 Bacteria 5530962
318 2896319728 2896317667 Bacteria 4606601
319 2896345155 2896344016 Bacteria 3811746
320 2904447782 2904445276 Bacteria 5310396
321 2906002845 2905999023 Bacteria 4591259
322 2914761899 2914759650 Bacteria 4701441
323 2919099908 2919097161 Bacteria 3860339
324 2919178978 2919177583 Bacteria 5641607
325 2919188005 2919186247 Bacteria 6244071
326 2919403568 2919399522 Bacteria 5164947
327 2919437931 2919437846 Bacteria 6199444
328 2919696069 2919692658 Bacteria 5943958
329 2928083786 2928078545 Bacteria 6534839
330 2928152227 2928147474 Bacteria 6512076
331 2932084790 2932082852 Bacteria 6563563
332 2939664728 2939664404 Bacteria 6364494
333 2945928714 2945924605 Bacteria 4296724
334 2945997793 2945997725 Bacteria 6404843
335 2946019837 2946019816 Bacteria 4621265
336 2954020249 2954016120 Bacteria 6446024
337 2977247565 2977243572 Bacteria 4374394
338 2984574645 2984572630 Bacteria 4186940
339 2984608096 2984606641 Bacteria 4186971
340 2993374890 2993372514 Bacteria 4214139
341 2993481745 2993480792 Bacteria 4022225
342 3003236169 3003233435 Bacteria 4458031
343 Ga0451577_0078097
344 SwRhRL2b_contig_1139619
345 JGI24739J22299_10003039
346 JGI24739J22299_10005446
347 JGI24735J21928_10000003
348 JGI25162J39368_1000158
349 JGI25152J39213_1000257
350 JGI25150J39212_1000025
351 JGI25151J46595_10000089
352 JGI25165J46597_1000621
353 JGI25153J46596_10000079
354 rootH1_10019188
355 rootH1_10048991
356 rootH2_10000984
357 rootH2_10042190
358 rootH2_10170042
359 rootL2_10084996
360 rootH1_10050560
361 rootH1_10255591
362 Ga0055536_1000006
363 Ga0065714_10005588
364 Ga0065714_10007063
365 Ga0065714_10064606
366 Ga0065714_10065201
367 Ga0065714_10078398
368 Ga0065714_10084151
369 Ga0065714_10084709
370 Ga0065704_10083346
371 Ga0070658_10000635
372 Ga0070683_100002128
373 Ga0070682_100011426
374 Ga0070668_100047285
375 Ga0070671_100009095
376 Ga0070662_100000053
377 Ga0070662_100151678
378 Ga0070684_100000979
379 Ga0068855_100000185
380 Ga0068855_100000286
381 Ga0068855_100000501
382 Ga0068855_100072836
383 Ga0068856_100000095
384 Ga0068856_100086985
385 Ga0075366_10000305
386 Ga0075366_10042857
387 Ga0105244_10000018
388 Ga0105250_10008920
389 Ga0105240_10000892
390 Ga0105240_10002687
391 Ga0105240_10002786
392 Ga0105240_10003529
393 Ga0105240_10074465
394 Ga0105240_10092017
395 Ga0105245_10085867
396 Ga0105243_10000008
397 Ga0105243_10000089
398 Ga0105241_10009402
399 Ga0105241_10028655
400 Ga0105237_10000400
401 Ga0105237_10002087
402 Ga0105237_10007167
403 Ga0105237_10011014
404 Ga0105237_10012888
405 Ga0105237_10031940
406 Ga0105249_10008513
407 Ga0105249_10015743
408 Ga0105239_10000009
409 Ga0105239_10000278
410 Ga0105239_10007160
411 Ga0105239_10021966
412 Ga0105239_10024404
413 Ga0105246_10081869
414 Ga0157373_10000067
415 Ga0157373_10025665
416 Ga0157371_10000291
417 Ga0157371_10000296
418 Ga0157371_10041155
419 Ga0157370_10000389
420 Ga0157370_10006323
421 Ga0157370_10008185
422 Ga0157370_10021434
423 Ga0157370_10028732
424 Ga0157370_10036387
425 Ga0157369_10000140
426 Ga0157369_10000164
427 Ga0157374_10060919
428 Ga0163162_10000005
429 Ga0163162_10000065
430 Ga0163162_10036606
431 Ga0157372_10000514
432 Ga0157372_10052030
433 Ga0157375_10004654
434 Ga0182008_10000016
435 Ga0182008_10000167
436 Ga0182008_10000980
437 Ga0182006_1000194
438 Ga0182006_1000324
439 Ga0182007_10000005
440 Ga0183373_1002
441 Ga0163161_10000135
442 Ga0163161_10000479
443 Ga0163161_10002668
444 Ga0163161_10045823
445 Ga0207427_100376
446 Ga0209437_100048
447 Ga0209437_100280
448 Ga0207425_1000008
449 Ga0209129_1000042
450 Ga0209233_1000029
451 Ga0209233_1019666
452 Ga0209455_1002242
453 Ga0209675_1000159
454 Ga0209676_1000039
455 Ga0209025_1000020
456 Ga0209758_1000022
457 Ga0209050_1000033
458 Ga0207655_1000058
459 Ga0207647_10000752
460 Ga0207647_10000988
461 Ga0207705_10000636
462 Ga0207695_10000267
463 Ga0207695_10000390
464 Ga0207695_10082143
465 Ga0207695_10135279
466 Ga0207671_10004100
467 Ga0207671_10004658
468 Ga0207671_10006520
469 Ga0207671_10007195
470 Ga0207671_10081135
471 Ga0207644_10031382
472 Ga0207690_10046475
473 Ga0207706_10000444
474 Ga0207709_10000006
475 Ga0207709_10000136
476 Ga0207661_10034481
477 Ga0207661_10043038
478 Ga0207667_10000136
479 Ga0207667_10000204
480 Ga0207667_10000754
481 Ga0207667_10081929
482 Ga0207712_10042520
483 Ga0207678_10126346
484 Ga0207702_10006023
485 Ga0207702_10190801
486 Ga0307517_10014235
487 Ga0307515_10001098
488 Ga0307515_10002118
489 Ga0307509_10032255
490 Ga0307408_100000839
491 Ga0307408_100002335
492 Ga0316578_10008161
493 Ga0307405_10000094
494 Ga0307407_10000001
495 Ga0307412_10000640
496 Ga0307412_10001858
497 Ga0307412_10002518
498 Ga0307416_100000020
499 Ga0307416_100000026
500 Ga0307414_10000049
501 Ga0307414_10000153
502 Ga0307414_10000890
503 Ga0307414_10010157
504 Ga0307414_10029350
505 Ga0307507_10004880
506 Ga0307510_10000714
507 Ga0316584_0003823
508 Ga0316584_0010651
509 Ga0395899_0000050
510 Ga0395899_0004143
511 Ga0395900_0000139
512 Ga0395900_0003170
513 Ga0395905_0003831
514 Ga0395901_0004810
515 Ga0400490_57304
516 Ga0400483_190368
517 Ga0400489_01000
518 Ga0439465_0000815
519 Ga0439445_0002424
520 Ga0451577_0000030
521 Ga0451577_0000856
522 Ga0451577_0136270
523 Ga0453683_0000307
524 Ga0453684_0000256
525 Ga0453684_0000260
526 Ga0453684_0000876
527 Ga0453684_0005074
528 Ga0453684_0005484
529 Ga0453684_0032507
530 Ga0453684_0255590
531 Ga0451576_0000103
532 Ga0451576_0000633
533 Ga0451576_0031911
534 Ga0451576_0036489
535 Ga0495627_000029
536 Ga0495590_0001263
537 Ga0495638_0025376
538 Ga0495650_0000107
539 Ga0495585_0000014
540 Ga0495585_0004514
541 Ga0495596_0000534
542 Ga0495583_0006417
543 Ga0495606_0000303
544 Ga0495606_0006741
545 Ga0495606_0008687
546 Ga0495606_0011609
547 Ga0495606_0015014
548 Ga0495610_0000001
549 Ga0495610_0000048
550 Ga0495610_0000367
551 Ga0495610_0003081
552 Ga0495616_0002195
553 Ga0495631_0008313
554 Ga0495637_0026235
555 Ga0495643_0014078
556 Ga0495644_0012973
557 Ga0495648_0006357
558 Ga0495648_0061916
559 Ga0495663_0000243
560 Ga0495654_0000008
561 Ga0495654_0094855
562 Ga0495609_0000010
563 Ga0495609_0009311
564 Ga0495622_0006876
565 Ga0495633_0000015
566 Ga0495633_0000163
567 Ga0495668_0000010
568 Ga0495625_0000021
569 Ga0495625_0002809
570 Ga0495625_0002922
571 Ga0495625_0003409
572 Ga0495625_0005748
573 Ga0495625_0009153
574 Ga0495625_0018640
575 Ga0495661_0001335
576 Ga0495671_0035342
577 Ga0495649_0000009
578 Ga0495660_0009954
579 Ga0495687_030648
580 Ga0495687_032961
581 Ga0495677_0011031
582 Ga0495686_0000153
583 Ga0495686_0001677
584 Ga0495686_0021695
585 Ga0496105_0084771
586 Ga0496116_0000037
587 Ga0496117_0000086
588 Ga0496117_0003552
589 Ga0496118_0000284
590 Ga0496119_0000037
591 Ga0496122_0000389
592 Ga0496122_0000489
593 Ga0496122_0001909
594 Ga0496122_0002275
595 Ga0496122_0015412
596 Ga0496122_0022721
597 Ga0496122_0025245
598 Ga0496123_0000739
599 Ga0496123_0014387
600 Ga0496124_0006053
601 Ga0496125_0000685
602 Ga0496125_0009248
603 Ga0496126_0002873
604 Ga0501241_000009
605 Ga0501269_000196
606 nmdc:mga0k408_52310_c1
607 nmdc:mga0k408_74_c2
608 Ga0500608_003670
609 Ga0500618_000057
610 Ga0500618_009287
611 Ga0500642_0025900
612 Ga0500622_0001792
613 Ga0500624_001370
614 2511233549
615 2585142361
616 2585159302
617 2585163562
618 2585426715
619 2586209346
620 2587680718
621 2587748836
622 2587752727
623 2587868549
624 2588211829
625 2588216503
626 2588217297
627 2588220587
628 2588225873
629 2588230937
630 2588447772
631 2590603684
632 2590610417
633 2599479658
634 2722728573
635 2729202546
636 2738699625
637 2738756381
638 2738855036
639 2739253374
640 2739300026
641 2739586858
642 2740060644
643 2753675030
644 2765575907
645 2772606618
646 2775674135
647 2816875617
648 2819547314
649 2833640450
650 2842087780
651 2842727701
652 2842911095
653 2849283048
654 2852627129
655 2852629863
656 2871724832
657 2884636278
658 2884935935
659 2889293600
660 2896319728
661 2896345155
662 2904447782
663 2906002845
664 2914761899
665 2919099908
666 2919178978
667 2919188005
668 2919403568
669 2919437931
670 2919696069
671 2928083786
672 2928152227
673 2932084790
674 2939664728
675 2945928714
676 2945997793
677 2946019837
678 2954020249
679 2977247565
680 2984574645
681 2984608096
682 2993374890
683 2993481745
684 3003236169

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00221

Lyase_aromatic

Aromatic amino acid lyase

91

549

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1b8f-assembly1.cif.gz_A histidine ammonia-lyase (hal) from pseudomonas putida 0.946 3 491
1gkj-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant y280f from pseudomonas putida 0.9457 3 492
1eb4-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant f329a from pseudomonas putida 0.9446 3 491
1gk2-assembly1.cif.gz_A histidine ammonia-lyase (hal) mutant f329g from pseudomonas putida 0.9428 3 491
7tqr-assembly1.cif.gz_A crystal structure of histidine ammonia lyase from thermoplasma acidophilum 0.9409 1 492
ID Description Score Start End Superfamily
af_Q4E133_201_513_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9447 198 491 1.20.200.10
1eb4A02 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9436 198 491 1.20.200.10
af_Q2G2P7_3_196_1.10.275.10 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9355 1 194 1.10.275.10
af_Q2G2P7_197_503_1.20.200.10 Mainly Alpha;Up-down Bundle;Fumarase C; Chain A, domain 2;Fumarase/aspartase (Central domain) 0.9336 198 495 1.20.200.10
2ohyB01 Mainly Alpha;Orthogonal Bundle;Fumarase C; Chain B, domain 1;Fumarase/aspartase (N-terminal domain) 0.9334 4 194 1.10.275.10
ID Description Score Start End GO Terms
AF-A0A354GGD0-F1-model_v4 Histidine ammonia-lyase 0.9707 1 131 GO:0016841
AF-A0A258DPI6-F1-model_v4 Histidine ammonia-lyase 0.9691 1 350 GO:0016841
AF-A0A418PRS7-F1-model_v4 Histidine ammonia-lyase (EC 4.3.1.3) 0.9689 1 491 GO:0004397
GO:0005737
GO:0019556
GO:0019557
AF-A0A2M7U5J6-F1-model_v4 Histidine ammonia-lyase (EC 4.3.1.3) 0.9642 1 491 GO:0004397
GO:0005737
GO:0019556
GO:0019557
AF-A0A6N6SBE3-F1-model_v4 Histidine ammonia-lyase (EC 4.3.1.3) 0.9626 36 491 GO:0004397
GO:0005737
GO:0019556
GO:0019557

Map