F415282

General Info

Members Datasets Scaffolds Average Seq Length
342 178 684 1124

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0017972|Ga0453684_0017972_2794_6735
Length 1293
Sequence MKFAEYKNFDLSQINKDVLKSWQEGKVFEKSIDQREGCPSFIFYEGPPSANGIPGIHHVMARTIKDIFCRYKTMKGFQVKRKAGWDTHGLPVELGVEKALGITKEDIGKKISVEEYNKACRTDVMKYTREWEDLTQIMGYWVDMTDPYITYDNQYIESLWYLLKQLYNKGLLYKGYTIQPYSPAAGTGLSTHELNQPGCYKDVKDTTVVAQFKVKEKEKLLDDCDQKFDLFFLAWTTTPWTLPSNTALAVGANIEYFKVKTINPYTKKPVIVIVAKDLFSNFFIVPKEINGKPLFPDFNKSAEIIDIVPNGDYNNFNILDINKIRYWEIIGVCKGSELNNIKYEQLLPYQQPNNGDAFRVLIGDFVTTEDGTGIVHIAPSFGADDFRVAKQNGIGSLTLVDKQGKFIEGCGDISGRFVKNAYDPKLSEDDETVDLFIALKLKADNKAFRIEKYIHTYPHCWRTDKPVLYYPLDSWFVKTTALRDRMIELNNTINWKPESTGSGRFGKWLENLQDWNLSRSRYWGTPLPIWRTEDASEEICIGTVEELKNEIEKSVKAGLMKSNPLATFKPGDESKNNYLNFDLHKPFVDDIILVSQSGKPMHRENDLIDVWFDSGAMPYAQVHYLGNTAPSSSPQGGEKEASSLTSTKGEGEKSAPKYQTARASMYPLLKKLADDKKKNQTQSEGVLWECLRGKQLENYKFRRQHLIDEFIVDFVCLEKQLIIEVDGGYHNQPDVQKADALRTEILESLCYRVIRFTNEEVLSNIDYVLNRIKLALEALPIPSVKNLISKVSSPLPLGEGRGGASLFPADFIAEGVDQTRGWFFTLHAIATMLFDSVAFKNIISNGLVLDKNGNKMSKRLGNAVDPFTTIEKYGSDPLRWYMITNASPWDNLKFDIAGVEEVMRKFFGTLHNTYSFFALYANVDGFAYKEAEIPINERPEIDRWIISLLNSLIKEVDECYADYEPTKAGRAIANFVGENLSNWYVRLNRKRFWGGEFSKDKIAAYQTLYTCIDVVAKLASPIAPFYTEKIFTDLNVTTGLNKSGSVHLSSFPKINEKNIDRRKVNIKVRQPLQKIMIPILDESLVTQFEAVKNLILSEVNVKEVEYLKDTKGFLVKKIKPNFKTLGPRYGKLMKQISNAVVSFSQDDIFNFESKNGCTLIVEGQKVELFNEDVEITSEDIPGWLVASEGRLTVALDIKVTEELRQEGIAREFINRIQNLRKDSDFDVTDKILIEIQKHEAINDAIEIHKEYISAQTLAIELSLVENIKNNGSKLVDIDEEIQTLIRIERKKEK

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
77 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
78 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
79 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
80 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
83 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
117 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
118 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
121 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
122 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
123 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
127 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
132 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
135 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
136 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
137 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
138 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
139 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
140 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
143 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
144 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
145 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
167 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
168 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
169 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
170 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
171 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
172 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
173 2738541278 Niastella sp. CF465 Isolate Unclassified
174 2818991444 Filimonas endophytica 3197 Isolate Unclassified
175 2881955468 Edaphocola flava HME-24 Isolate Rhizosphere
176 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
177 2914759650 Rhizosphaericola mali Isolate Rhizosphere
178 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.25
Metatranscriptomes 0
Isolates 1.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.97
Nodule 0
Rhizoplane 0
Rhizosphere 90.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0017972 3300044712 Bacteria 10893
2 SwRhRL2b_contig_1886170 2162886007 Bacteria 206362
3 JGI24751J29686_10001064 3300002459 Bacteria 5957
4 rootH2_10006783 3300003320 Bacteria 50422
5 rootH2_10027316 3300003320 Bacteria 4324
6 rootH1_10119514 3300003323 Bacteria 9404
7 JGI25160J50197_1001275 3300003354 Bacteria 12784
8 Ga0055530_10000971 3300003791 Bacteria 23230
9 Ga0065165_1000042 3300005262 Bacteria 203874
10 Ga0065704_10070159 3300005289 Bacteria 207348
11 Ga0070676_10008491 3300005328 Bacteria 5537
12 Ga0070683_100002540 3300005329 Bacteria 14571
13 Ga0070666_10000095 3300005335 Bacteria 61433
14 Ga0070666_10000172 3300005335 Bacteria 44437
15 Ga0070680_100001877 3300005336 Bacteria 15408
16 Ga0068868_100000356 3300005338 Bacteria 31040
17 Ga0068868_100005498 3300005338 Bacteria 8914
18 Ga0068868_100015623 3300005338 Bacteria 5621
19 Ga0068868_100020813 3300005338 Bacteria 4936
20 Ga0070661_100001916 3300005344 Bacteria 14406
21 Ga0070661_100013812 3300005344 Bacteria 5675
22 Ga0070668_100000169 3300005347 Bacteria 41705
23 Ga0070669_100001129 3300005353 Bacteria 19498
24 Ga0070675_100011111 3300005354 Bacteria 7048
25 Ga0070674_100000354 3300005356 Bacteria 22848
26 Ga0070673_100001347 3300005364 Bacteria 14334
27 Ga0070673_100013400 3300005364 Bacteria 5671
28 Ga0070688_100000319 3300005365 Bacteria 24587
29 Ga0070667_100000553 3300005367 Bacteria 37217
30 Ga0070667_100006055 3300005367 Bacteria 10047
31 Ga0070662_100003420 3300005457 Bacteria 9898
32 Ga0070662_100014064 3300005457 Bacteria 5337
33 Ga0070681_10035098 3300005458 Bacteria 5037
34 Ga0068867_100001171 3300005459 Bacteria 17945
35 Ga0070698_100006171 3300005471 Bacteria 13052
36 Ga0070698_100026057 3300005471 Bacteria 6089
37 Ga0070679_100002688 3300005530 Bacteria 16195
38 Ga0070684_100001002 3300005535 Bacteria 20102
39 Ga0070684_100003871 3300005535 Bacteria 11326
40 Ga0068853_100000272 3300005539 Bacteria 36612
41 Ga0068853_100000465 3300005539 Bacteria 27727
42 Ga0068853_100003026 3300005539 Bacteria 12842
43 Ga0070672_100000061 3300005543 Bacteria 49701
44 Ga0070686_100004012 3300005544 Bacteria 8092
45 Ga0070686_100005276 3300005544 Bacteria 7143
46 Ga0070665_100000002 3300005548 Bacteria 849037
47 Ga0070665_100000612 3300005548 Bacteria 48973
48 Ga0070665_100029913 3300005548 Bacteria 5482
49 Ga0068855_100000439 3300005563 Bacteria 51399
50 Ga0068855_100016966 3300005563 Bacteria 8757
51 Ga0070664_100002009 3300005564 Bacteria 16315
52 Ga0070664_100010460 3300005564 Bacteria 7521
53 Ga0068857_100004209 3300005577 Bacteria 12120
54 Ga0068857_100020035 3300005577 Bacteria 5880
55 Ga0068856_100012439 3300005614 Bacteria 8239
56 Ga0068852_100002654 3300005616 Bacteria 12360
57 Ga0068852_100010723 3300005616 Bacteria 6862
58 Ga0068859_100000006 3300005617 Bacteria 421509
59 Ga0068859_100001485 3300005617 Bacteria 23871
60 Ga0068859_100007017 3300005617 Bacteria 11435
61 Ga0068864_100001631 3300005618 Bacteria 18493
62 Ga0068861_100010309 3300005719 Bacteria 6484
63 Ga0068861_100028054 3300005719 Bacteria 4106
64 Ga0068851_10000010 3300005834 Bacteria 202121
65 Ga0068863_100004540 3300005841 Bacteria 13688
66 Ga0068858_100002842 3300005842 Bacteria 17411
67 Ga0068858_100004312 3300005842 Bacteria 13973
68 Ga0068860_100000003 3300005843 Bacteria 575741
69 Ga0068860_100000591 3300005843 Bacteria 43327
70 Ga0068860_100004454 3300005843 Bacteria 14291
71 Ga0068860_100008719 3300005843 Bacteria 10100
72 Ga0068862_100005546 3300005844 Bacteria 10540
73 Ga0081540_1006904 3300005983 Bacteria 8189
74 Ga0081539_10000042 3300005985 Bacteria 289955
75 Ga0097621_100000821 3300006237 Bacteria 21965
76 Ga0097621_100001193 3300006237 Bacteria 18002
77 Ga0097621_100001379 3300006237 Bacteria 16714
78 Ga0068871_100002568 3300006358 Bacteria 12403
79 Ga0068871_100004016 3300006358 Bacteria 10166
80 Ga0075428_100004793 3300006844 Bacteria 14993
81 Ga0075430_100003349 3300006846 Bacteria 13421
82 Ga0075431_100006528 3300006847 Bacteria 11583
83 Ga0075429_100042601 3300006880 Bacteria 3950
84 Ga0068865_100005228 3300006881 Bacteria 7850
85 Ga0068865_100014490 3300006881 Bacteria 5010
86 Ga0097620_100000006 3300006931 Bacteria 421509
87 Ga0097620_100001485 3300006931 Bacteria 23871
88 Ga0097620_100007017 3300006931 Bacteria 11435
89 Ga0105240_10000020 3300009093 Bacteria 399699
90 Ga0105240_10000367 3300009093 Bacteria 84666
91 Ga0105240_10000487 3300009093 Bacteria 73453
92 Ga0105240_10008390 3300009093 Bacteria 14786
93 Ga0105240_10008735 3300009093 Bacteria 14442
94 Ga0105240_10063384 3300009093 Bacteria 4598
95 Ga0111539_10002979 3300009094 Bacteria 22456
96 Ga0105247_10001069 3300009101 Bacteria 20467
97 Ga0114129_10013606 3300009147 Bacteria 11594
98 Ga0114129_10016435 3300009147 Bacteria 10532
99 Ga0105241_10000213 3300009174 Bacteria 43667
100 Ga0105241_10001219 3300009174 Bacteria 19671
101 Ga0105241_10017960 3300009174 Bacteria 5200
102 Ga0105241_10020304 3300009174 Bacteria 4908
103 Ga0105242_10017470 3300009176 Bacteria 5592
104 Ga0105248_10092234 3300009177 Bacteria 3411
105 Ga0105237_10000783 3300009545 Bacteria 43494
106 Ga0105237_10004083 3300009545 Bacteria 17025
107 Ga0105237_10004647 3300009545 Bacteria 15820
108 Ga0105237_10014881 3300009545 Bacteria 8114
109 Ga0105237_10040045 3300009545 Bacteria 4727
110 Ga0105238_10002192 3300009551 Bacteria 19721
111 Ga0105249_10000298 3300009553 Bacteria 51006
112 Ga0105249_10000382 3300009553 Bacteria 44030
113 Ga0105249_10012057 3300009553 Bacteria 7608
114 Ga0105249_10012186 3300009553 Bacteria 7572
115 Ga0105249_10025283 3300009553 Bacteria 5344
116 Ga0105239_10000252 3300010375 Bacteria 80006
117 Ga0105239_10016670 3300010375 Bacteria 8121
118 Ga0157370_10003149 3300013104 Bacteria 19547
119 Ga0157370_10030219 3300013104 Bacteria 5310
120 Ga0157370_10030615 3300013104 Bacteria 5272
121 Ga0157369_10035428 3300013105 Bacteria 5472
122 Ga0157374_10000013 3300013296 Bacteria 461240
123 Ga0157374_10000627 3300013296 Bacteria 31113
124 Ga0157374_10048037 3300013296 Bacteria 3959
125 Ga0157378_10002084 3300013297 Bacteria 17884
126 Ga0157378_10005519 3300013297 Bacteria 11081
127 Ga0163162_10000752 3300013306 Bacteria 30172
128 Ga0163162_10000885 3300013306 Bacteria 27862
129 Ga0163162_10002506 3300013306 Bacteria 17371
130 Ga0163162_10012330 3300013306 Bacteria 8347
131 Ga0163162_10016222 3300013306 Bacteria 7286
132 Ga0157372_10000925 3300013307 Bacteria 31981
133 Ga0157372_10003609 3300013307 Bacteria 16658
134 Ga0157372_10011068 3300013307 Bacteria 9599
135 Ga0157375_10000098 3300013308 Bacteria 88130
136 Ga0157375_10001274 3300013308 Bacteria 21805
137 Ga0157375_10009827 3300013308 Bacteria 8412
138 Ga0163163_10000202 3300014325 Bacteria 61701
139 Ga0163163_10000272 3300014325 Bacteria 51699
140 Ga0163163_10001784 3300014325 Bacteria 18138
141 Ga0163163_10007094 3300014325 Bacteria 9851
142 Ga0157380_10000401 3300014326 Bacteria 26189
143 Ga0157377_10001126 3300014745 Bacteria 11323
144 Ga0157377_10002499 3300014745 Bacteria 8141
145 Ga0157379_10000103 3300014968 Bacteria 58102
146 Ga0157379_10038479 3300014968 Bacteria 4267
147 Ga0157376_10000286 3300014969 Bacteria 34101
148 Ga0157376_10001315 3300014969 Bacteria 16373
149 Ga0157376_10001993 3300014969 Bacteria 13674
150 Ga0163161_10002351 3300017792 Bacteria 13559
151 Ga0163161_10002415 3300017792 Bacteria 13399
152 Ga0163161_10030501 3300017792 Bacteria 3838
153 Ga0209673_1000113 3300025273 Bacteria 179012
154 Ga0209050_1000185 3300025298 Bacteria 141889
155 Ga0207426_1000105 3300025302 Bacteria 247269
156 Ga0207426_1001220 3300025302 Bacteria 22695
157 Ga0209257_1000257 3300025304 Bacteria 122448
158 Ga0207656_10000029 3300025321 Bacteria 69992
159 Ga0207682_10001965 3300025893 Bacteria 9324
160 Ga0207688_10004241 3300025901 Bacteria 7817
161 Ga0207645_10014491 3300025907 Bacteria 5274
162 Ga0207654_10001199 3300025911 Bacteria 13896
163 Ga0207654_10004848 3300025911 Bacteria 6809
164 Ga0207707_10000160 3300025912 Bacteria 70695
165 Ga0207695_10000020 3300025913 Bacteria 723025
166 Ga0207695_10000051 3300025913 Bacteria 399641
167 Ga0207695_10000056 3300025913 Bacteria 382433
168 Ga0207695_10000066 3300025913 Bacteria 334103
169 Ga0207695_10000081 3300025913 Bacteria 284797
170 Ga0207695_10000156 3300025913 Bacteria 204576
171 Ga0207695_10000550 3300025913 Bacteria 77346
172 Ga0207695_10000778 3300025913 Bacteria 60342
173 Ga0207695_10018244 3300025913 Bacteria 8119
174 Ga0207671_10000103 3300025914 Bacteria 129408
175 Ga0207671_10000551 3300025914 Bacteria 50484
176 Ga0207671_10001002 3300025914 Bacteria 34718
177 Ga0207671_10001154 3300025914 Bacteria 31508
178 Ga0207671_10021678 3300025914 Bacteria 4869
179 Ga0207660_10004570 3300025917 Bacteria 9015
180 Ga0207649_10000582 3300025920 Bacteria 24980
181 Ga0207706_10015288 3300025933 Bacteria 6940
182 Ga0207706_10017033 3300025933 Bacteria 6556
183 Ga0207706_10018996 3300025933 Bacteria 6182
184 Ga0207706_10027408 3300025933 Bacteria 5094
185 Ga0207691_10000154 3300025940 Bacteria 64281
186 Ga0207691_10035611 3300025940 Bacteria 4618
187 Ga0207689_10001730 3300025942 Bacteria 20627
188 Ga0207689_10003394 3300025942 Bacteria 14552
189 Ga0207689_10023003 3300025942 Bacteria 5235
190 Ga0207661_10001233 3300025944 Bacteria 17127
191 Ga0207679_10000927 3300025945 Bacteria 18727
192 Ga0207679_10001076 3300025945 Bacteria 17378
193 Ga0207667_10005973 3300025949 Bacteria 14814
194 Ga0207667_10043864 3300025949 Bacteria 4744
195 Ga0207651_10002052 3300025960 Bacteria 9478
196 Ga0207712_10001115 3300025961 Bacteria 18744
197 Ga0207712_10002914 3300025961 Bacteria 10929
198 Ga0207712_10007254 3300025961 Bacteria 6989
199 Ga0207668_10001109 3300025972 Bacteria 16020
200 Ga0207668_10020072 3300025972 Bacteria 4238
201 Ga0207658_10000570 3300025986 Bacteria 33415
202 Ga0207703_10000883 3300026035 Bacteria 29482
203 Ga0207703_10004659 3300026035 Bacteria 11198
204 Ga0207639_10000837 3300026041 Bacteria 20872
205 Ga0207641_10000122 3300026088 Bacteria 113915
206 Ga0207641_10001032 3300026088 Bacteria 28240
207 Ga0207648_10004750 3300026089 Bacteria 13885
208 Ga0207648_10010559 3300026089 Bacteria 8740
209 Ga0207648_10028587 3300026089 Bacteria 4942
210 Ga0207648_10034101 3300026089 Bacteria 4488
211 Ga0207676_10021544 3300026095 Bacteria 4728
212 Ga0207674_10009039 3300026116 Bacteria 11445
213 Ga0207674_10020755 3300026116 Bacteria 7090
214 Ga0207675_100003729 3300026118 Bacteria 14840
215 Ga0207675_100008120 3300026118 Bacteria 9890
216 Ga0207683_10005006 3300026121 Bacteria 11382
217 Ga0207698_10001826 3300026142 Bacteria 12449
218 Ga0207698_10017987 3300026142 Bacteria 4807
219 Ga0207428_10022276 3300027907 Bacteria 5350
220 Ga0268266_10000986 3300028379 Bacteria 35861
221 Ga0268266_10020828 3300028379 Bacteria 5592
222 Ga0268264_10000973 3300028381 Bacteria 29345
223 Ga0268264_10001126 3300028381 Bacteria 26251
224 Ga0265334_10007130 3300028573 Bacteria 4796
225 Ga0265323_10000291 3300028653 Bacteria 28960
226 Ga0307517_10006326 3300028786 Bacteria 17574
227 Ga0307515_10000021 3300028794 Bacteria 406008
228 Ga0265338_10001644 3300028800 Bacteria 35766
229 Ga0265338_10004306 3300028800 Bacteria 19316
230 Ga0265338_10029639 3300028800 Bacteria 5418
231 Ga0307511_10000027 3300030521 Bacteria 109500
232 Ga0265327_10000031 3300031251 Bacteria 325718
233 Ga0265327_10000060 3300031251 Bacteria 234933
234 Ga0265327_10000697 3300031251 Bacteria 53480
235 Ga0265327_10001479 3300031251 Bacteria 29308
236 Ga0265327_10007358 3300031251 Bacteria 8524
237 Ga0265316_10019431 3300031344 Bacteria 5812
238 Ga0307509_10011098 3300031507 Bacteria 10971
239 Ga0307408_100000176 3300031548 Bacteria 71854
240 Ga0307516_10000869 3300031730 Bacteria 41512
241 Ga0395899_0000064 3300037312 Bacteria 207082
242 Ga0395905_0000001 3300037471 Bacteria 2037079
243 Ga0395905_0000049 3300037471 Bacteria 230719
244 Ga0400489_06442 3300039093 Bacteria 12590
245 Ga0436365_0262267 3300039437 Bacteria 30470
246 Ga0451855_0685570 3300041511 Bacteria 4339
247 Ga0439462_0000387 3300042015 Bacteria 8464
248 Ga0451577_0000048 3300042876 Bacteria 309377
249 Ga0451577_0000131 3300042876 Bacteria 167486
250 Ga0451577_0000873 3300042876 Bacteria 44731
251 Ga0451577_0002711 3300042876 Bacteria 20608
252 Ga0451577_0013448 3300042876 Bacteria 7658
253 Ga0451577_0020378 3300042876 Bacteria 6086
254 Ga0451577_0052558 3300042876 Bacteria 3637
255 Ga0466972_0000016 3300044658 Bacteria 208802
256 Ga0453683_0000079 3300044673 Bacteria 145949
257 Ga0453683_0000190 3300044673 Bacteria 85362
258 Ga0453683_0000964 3300044673 Bacteria 27257
259 Ga0453683_0009052 3300044673 Bacteria 6652
260 Ga0453683_0015967 3300044673 Bacteria 4852
261 Ga0466961_0016553 3300044693 Bacteria 4739
262 Ga0453684_0000127 3300044712 Bacteria 336026
263 Ga0453684_0000161 3300044712 Bacteria 298175
264 Ga0453684_0000558 3300044712 Bacteria 140560
265 Ga0453684_0000624 3300044712 Bacteria 129224
266 Ga0453684_0000766 3300044712 Bacteria 111429
267 Ga0453684_0000920 3300044712 Bacteria 97531
268 Ga0453684_0001476 3300044712 Bacteria 66362
269 Ga0453684_0003752 3300044712 Bacteria 33592
270 Ga0453684_0003976 3300044712 Bacteria 32291
271 Ga0453684_0004355 3300044712 Bacteria 30046
272 Ga0453684_0006199 3300044712 Bacteria 22939
273 Ga0453684_0023634 3300044712 Bacteria 9034
274 Ga0453684_0023771 3300044712 Bacteria 9002
275 Ga0453684_0028962 3300044712 Bacteria 7881
276 Ga0453684_0048466 3300044712 Bacteria 5618
277 Ga0466970_0000551 3300044765 Bacteria 18366
278 Ga0466957_0000247 3300044842 Bacteria 25944
279 Ga0466957_0018535 3300044842 Bacteria 4088
280 Ga0466959_0000196 3300045049 Bacteria 39994
281 Ga0466959_0001278 3300045049 Bacteria 15211
282 Ga0451576_0000059 3300045051 Bacteria 296795
283 Ga0451576_0000198 3300045051 Bacteria 152129
284 Ga0451576_0000671 3300045051 Bacteria 70204
285 Ga0451576_0000767 3300045051 Bacteria 63351
286 Ga0451576_0000803 3300045051 Bacteria 61515
287 Ga0451576_0001444 3300045051 Bacteria 40442
288 Ga0451576_0001819 3300045051 Bacteria 34710
289 Ga0451576_0003297 3300045051 Bacteria 22419
290 Ga0451576_0012332 3300045051 Bacteria 9609
291 Ga0451576_0050488 3300045051 Bacteria 4362
292 Ga0495668_0000068 3300046616 Bacteria 176297
293 Ga0495636_0008953 3300047318 Bacteria 3942
294 Ga0495687_000179 3300047443 Bacteria 92387
295 Ga0495686_0000010 3300047472 Bacteria 573229
296 Ga0495686_0000230 3300047472 Bacteria 102747
297 Ga0501031_0013965 3300049568 Bacteria 5230
298 Ga0501032_0005324 3300049569 Bacteria 9572
299 Ga0501032_0007425 3300049569 Bacteria 8009
300 Ga0501033_0000177 3300049570 Bacteria 60638
301 Ga0501034_0007840 3300049571 Bacteria 11355
302 Ga0501034_0023517 3300049571 Bacteria 6278
303 Ga0501036_0003702 3300049572 Bacteria 12249
304 Ga0501036_0009166 3300049572 Bacteria 8138
305 Ga0501037_0001831 3300049573 Bacteria 15439
306 Ga0501038_0009879 3300049574 Bacteria 8734
307 Ga0501038_0013399 3300049574 Bacteria 7474
308 Ga0501038_0045766 3300049574 Bacteria 3797
309 Ga0501039_0007457 3300049575 Bacteria 8348
310 Ga0501043_0007524 3300049579 Bacteria 8645
311 Ga0501047_0031828 3300049581 Bacteria 5089
312 Ga0501073_0012634 3300049589 Bacteria 6159
313 Ga0501074_0011121 3300049590 Bacteria 6536
314 Ga0501225_0000713 3300049705 Bacteria 10462
315 Ga0501080_0022616 3300049742 Bacteria 5823
316 Ga0501035_0004413 3300049822 Bacteria 13356
317 Ga0501035_0007331 3300049822 Bacteria 10310
318 Ga0501035_0017448 3300049822 Bacteria 6621
319 Ga0501044_0000936 3300049823 Bacteria 35057
320 Ga0501044_0003957 3300049823 Bacteria 16592
321 Ga0501044_0015541 3300049823 Bacteria 8200
322 Ga0501044_0017697 3300049823 Bacteria 7644
323 Ga0501045_0000546 3300049824 Bacteria 23550
324 Ga0501284_00046 3300050005 Bacteria 47876
325 nmdc:mga05p37_6703_c1 3300050507 Bacteria 13569
326 nmdc:mga0qj67_15612_c1 3300050509 Bacteria 5751
327 nmdc:mga06r32_23414_c1 3300050510 Bacteria 5713
328 Ga0500578_0000010 3300053086 Bacteria 217642
329 Ga0500583_0000159 3300053092 Bacteria 27775
330 Ga0500562_000059 3300053108 Bacteria 54593
331 Ga0500568_0000473 3300053139 Bacteria 29794
332 Ga0500568_0004713 3300053139 Bacteria 7234
333 Ga0500622_0000672 3300053156 Bacteria 30234
334 Ga0500622_0001064 3300053156 Bacteria 22884
335 Ga0500611_000004 3300053727 Bacteria 253326
336 Ga0500645_004870 3300053730 Bacteria 5057
337 2738724704 2738541278 Bacteria 9755573
338 2819590427 2818991444 Bacteria 6968812
339 2881957382 2881955468 Bacteria 3545609
340 2890806276 2890804823 Bacteria 3717572
341 2914759792 2914759650 Bacteria 4701441
342 2929158557 2929154850 Bacteria 6753285
343 Ga0453684_0017972
344 SwRhRL2b_contig_1886170
345 JGI24751J29686_10001064
346 rootH2_10006783
347 rootH2_10027316
348 rootH1_10119514
349 JGI25160J50197_1001275
350 Ga0055530_10000971
351 Ga0065165_1000042
352 Ga0065704_10070159
353 Ga0070676_10008491
354 Ga0070683_100002540
355 Ga0070666_10000095
356 Ga0070666_10000172
357 Ga0070680_100001877
358 Ga0068868_100000356
359 Ga0068868_100005498
360 Ga0068868_100015623
361 Ga0068868_100020813
362 Ga0070661_100001916
363 Ga0070661_100013812
364 Ga0070668_100000169
365 Ga0070669_100001129
366 Ga0070675_100011111
367 Ga0070674_100000354
368 Ga0070673_100001347
369 Ga0070673_100013400
370 Ga0070688_100000319
371 Ga0070667_100000553
372 Ga0070667_100006055
373 Ga0070662_100003420
374 Ga0070662_100014064
375 Ga0070681_10035098
376 Ga0068867_100001171
377 Ga0070698_100006171
378 Ga0070698_100026057
379 Ga0070679_100002688
380 Ga0070684_100001002
381 Ga0070684_100003871
382 Ga0068853_100000272
383 Ga0068853_100000465
384 Ga0068853_100003026
385 Ga0070672_100000061
386 Ga0070686_100004012
387 Ga0070686_100005276
388 Ga0070665_100000002
389 Ga0070665_100000612
390 Ga0070665_100029913
391 Ga0068855_100000439
392 Ga0068855_100016966
393 Ga0070664_100002009
394 Ga0070664_100010460
395 Ga0068857_100004209
396 Ga0068857_100020035
397 Ga0068856_100012439
398 Ga0068852_100002654
399 Ga0068852_100010723
400 Ga0068859_100000006
401 Ga0068859_100001485
402 Ga0068859_100007017
403 Ga0068864_100001631
404 Ga0068861_100010309
405 Ga0068861_100028054
406 Ga0068851_10000010
407 Ga0068863_100004540
408 Ga0068858_100002842
409 Ga0068858_100004312
410 Ga0068860_100000003
411 Ga0068860_100000591
412 Ga0068860_100004454
413 Ga0068860_100008719
414 Ga0068862_100005546
415 Ga0081540_1006904
416 Ga0081539_10000042
417 Ga0097621_100000821
418 Ga0097621_100001193
419 Ga0097621_100001379
420 Ga0068871_100002568
421 Ga0068871_100004016
422 Ga0075428_100004793
423 Ga0075430_100003349
424 Ga0075431_100006528
425 Ga0075429_100042601
426 Ga0068865_100005228
427 Ga0068865_100014490
428 Ga0097620_100000006
429 Ga0097620_100001485
430 Ga0097620_100007017
431 Ga0105240_10000020
432 Ga0105240_10000367
433 Ga0105240_10000487
434 Ga0105240_10008390
435 Ga0105240_10008735
436 Ga0105240_10063384
437 Ga0111539_10002979
438 Ga0105247_10001069
439 Ga0114129_10013606
440 Ga0114129_10016435
441 Ga0105241_10000213
442 Ga0105241_10001219
443 Ga0105241_10017960
444 Ga0105241_10020304
445 Ga0105242_10017470
446 Ga0105248_10092234
447 Ga0105237_10000783
448 Ga0105237_10004083
449 Ga0105237_10004647
450 Ga0105237_10014881
451 Ga0105237_10040045
452 Ga0105238_10002192
453 Ga0105249_10000298
454 Ga0105249_10000382
455 Ga0105249_10012057
456 Ga0105249_10012186
457 Ga0105249_10025283
458 Ga0105239_10000252
459 Ga0105239_10016670
460 Ga0157370_10003149
461 Ga0157370_10030219
462 Ga0157370_10030615
463 Ga0157369_10035428
464 Ga0157374_10000013
465 Ga0157374_10000627
466 Ga0157374_10048037
467 Ga0157378_10002084
468 Ga0157378_10005519
469 Ga0163162_10000752
470 Ga0163162_10000885
471 Ga0163162_10002506
472 Ga0163162_10012330
473 Ga0163162_10016222
474 Ga0157372_10000925
475 Ga0157372_10003609
476 Ga0157372_10011068
477 Ga0157375_10000098
478 Ga0157375_10001274
479 Ga0157375_10009827
480 Ga0163163_10000202
481 Ga0163163_10000272
482 Ga0163163_10001784
483 Ga0163163_10007094
484 Ga0157380_10000401
485 Ga0157377_10001126
486 Ga0157377_10002499
487 Ga0157379_10000103
488 Ga0157379_10038479
489 Ga0157376_10000286
490 Ga0157376_10001315
491 Ga0157376_10001993
492 Ga0163161_10002351
493 Ga0163161_10002415
494 Ga0163161_10030501
495 Ga0209673_1000113
496 Ga0209050_1000185
497 Ga0207426_1000105
498 Ga0207426_1001220
499 Ga0209257_1000257
500 Ga0207656_10000029
501 Ga0207682_10001965
502 Ga0207688_10004241
503 Ga0207645_10014491
504 Ga0207654_10001199
505 Ga0207654_10004848
506 Ga0207707_10000160
507 Ga0207695_10000020
508 Ga0207695_10000051
509 Ga0207695_10000056
510 Ga0207695_10000066
511 Ga0207695_10000081
512 Ga0207695_10000156
513 Ga0207695_10000550
514 Ga0207695_10000778
515 Ga0207695_10018244
516 Ga0207671_10000103
517 Ga0207671_10000551
518 Ga0207671_10001002
519 Ga0207671_10001154
520 Ga0207671_10021678
521 Ga0207660_10004570
522 Ga0207649_10000582
523 Ga0207706_10015288
524 Ga0207706_10017033
525 Ga0207706_10018996
526 Ga0207706_10027408
527 Ga0207691_10000154
528 Ga0207691_10035611
529 Ga0207689_10001730
530 Ga0207689_10003394
531 Ga0207689_10023003
532 Ga0207661_10001233
533 Ga0207679_10000927
534 Ga0207679_10001076
535 Ga0207667_10005973
536 Ga0207667_10043864
537 Ga0207651_10002052
538 Ga0207712_10001115
539 Ga0207712_10002914
540 Ga0207712_10007254
541 Ga0207668_10001109
542 Ga0207668_10020072
543 Ga0207658_10000570
544 Ga0207703_10000883
545 Ga0207703_10004659
546 Ga0207639_10000837
547 Ga0207641_10000122
548 Ga0207641_10001032
549 Ga0207648_10004750
550 Ga0207648_10010559
551 Ga0207648_10028587
552 Ga0207648_10034101
553 Ga0207676_10021544
554 Ga0207674_10009039
555 Ga0207674_10020755
556 Ga0207675_100003729
557 Ga0207675_100008120
558 Ga0207683_10005006
559 Ga0207698_10001826
560 Ga0207698_10017987
561 Ga0207428_10022276
562 Ga0268266_10000986
563 Ga0268266_10020828
564 Ga0268264_10000973
565 Ga0268264_10001126
566 Ga0265334_10007130
567 Ga0265323_10000291
568 Ga0307517_10006326
569 Ga0307515_10000021
570 Ga0265338_10001644
571 Ga0265338_10004306
572 Ga0265338_10029639
573 Ga0307511_10000027
574 Ga0265327_10000031
575 Ga0265327_10000060
576 Ga0265327_10000697
577 Ga0265327_10001479
578 Ga0265327_10007358
579 Ga0265316_10019431
580 Ga0307509_10011098
581 Ga0307408_100000176
582 Ga0307516_10000869
583 Ga0395899_0000064
584 Ga0395905_0000001
585 Ga0395905_0000049
586 Ga0400489_06442
587 Ga0436365_0262267
588 Ga0451855_0685570
589 Ga0439462_0000387
590 Ga0451577_0000048
591 Ga0451577_0000131
592 Ga0451577_0000873
593 Ga0451577_0002711
594 Ga0451577_0013448
595 Ga0451577_0020378
596 Ga0451577_0052558
597 Ga0466972_0000016
598 Ga0453683_0000079
599 Ga0453683_0000190
600 Ga0453683_0000964
601 Ga0453683_0009052
602 Ga0453683_0015967
603 Ga0466961_0016553
604 Ga0453684_0000127
605 Ga0453684_0000161
606 Ga0453684_0000558
607 Ga0453684_0000624
608 Ga0453684_0000766
609 Ga0453684_0000920
610 Ga0453684_0001476
611 Ga0453684_0003752
612 Ga0453684_0003976
613 Ga0453684_0004355
614 Ga0453684_0006199
615 Ga0453684_0023634
616 Ga0453684_0023771
617 Ga0453684_0028962
618 Ga0453684_0048466
619 Ga0466970_0000551
620 Ga0466957_0000247
621 Ga0466957_0018535
622 Ga0466959_0000196
623 Ga0466959_0001278
624 Ga0451576_0000059
625 Ga0451576_0000198
626 Ga0451576_0000671
627 Ga0451576_0000767
628 Ga0451576_0000803
629 Ga0451576_0001444
630 Ga0451576_0001819
631 Ga0451576_0003297
632 Ga0451576_0012332
633 Ga0451576_0050488
634 Ga0495668_0000068
635 Ga0495636_0008953
636 Ga0495687_000179
637 Ga0495686_0000010
638 Ga0495686_0000230
639 Ga0501031_0013965
640 Ga0501032_0005324
641 Ga0501032_0007425
642 Ga0501033_0000177
643 Ga0501034_0007840
644 Ga0501034_0023517
645 Ga0501036_0003702
646 Ga0501036_0009166
647 Ga0501037_0001831
648 Ga0501038_0009879
649 Ga0501038_0013399
650 Ga0501038_0045766
651 Ga0501039_0007457
652 Ga0501043_0007524
653 Ga0501047_0031828
654 Ga0501073_0012634
655 Ga0501074_0011121
656 Ga0501225_0000713
657 Ga0501080_0022616
658 Ga0501035_0004413
659 Ga0501035_0007331
660 Ga0501035_0017448
661 Ga0501044_0000936
662 Ga0501044_0003957
663 Ga0501044_0015541
664 Ga0501044_0017697
665 Ga0501045_0000546
666 Ga0501284_00046
667 nmdc:mga05p37_6703_c1
668 nmdc:mga0qj67_15612_c1
669 nmdc:mga06r32_23414_c1
670 Ga0500578_0000010
671 Ga0500583_0000159
672 Ga0500562_000059
673 Ga0500568_0000473
674 Ga0500568_0004713
675 Ga0500622_0000672
676 Ga0500622_0001064
677 Ga0500611_000004
678 Ga0500645_004870
679 2738724704
680 2819590427
681 2881957382
682 2890806276
683 2914759792
684 2929158557

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

17

634

0.97

PF04480

DUF559

Protein of unknown function (DUF559)

668

777

0.95

PF19302

DUF5915

Domain of unknown function (DUF5915)

1092

1290

0.94

PF00133

tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

789

895

0.93

PF08264

Anticodon_1

Anticodon-binding domain of tRNA ligase

942

1098

0.86

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

816

917

0.8

PF09334

tRNA-synt_1g

tRNA synthetases class I (M)

45

222

0.64

Structural Annotation

Top 5 Hits

ID Description Score Start End
7d5c-assembly1.cif.gz_A ilers in complex with a trna site inhibitor 0.8886 10 1006
7d5c-assembly1.cif.gz_A ilers in complex with a trna site inhibitor 0.8868 10 1006
1jzs-assembly1.cif.gz_A isoleucyl-trna synthetase complexed with mupirocin 0.8822 4 883
1jzs-assembly1.cif.gz_A isoleucyl-trna synthetase complexed with mupirocin 0.8751 4 883
1ue0-assembly2.cif.gz_B isoleucyl-trna synthetase editing domain complexed with l-valine 0.8566 198 440
ID Description Score Start End Superfamily
af_Q58357_644_822_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9477 709 885 1.10.730.10
1jzqA03 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9299 697 883 1.10.730.10
af_P00956_215_378_3.90.740.10 Alpha Beta;Alpha-Beta Complex;Isoleucyl-tRNA Synthetase; domain 2;Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.9159 241 410 3.90.740.10
af_P9WFV3_661_832_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9041 699 886 1.10.730.10
1jzqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9036 4 696 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A0M3CLX6-F1-model_v4 deleted 0.9937 635 778
AF-A0A519UDV6-F1-model_v4 deleted 0.9736 586 930
AF-A0A524CKP4-F1-model_v4 Isoleucine--tRNA ligase 0.9646 649 837 GO:0004822
GO:0005524
GO:0006428
AF-A0A544TMB1-F1-model_v4 Uncharacterized protein 0.9605 1013 1092 GO:0004812
GO:0005524
GO:0006418
AF-A0A0M3CLX6-F1-model_v4 deleted 0.9605 635 778

Map