F415407

General Info

Members Datasets Scaffolds Average Seq Length
343 192 686 221

Family's Representative Sequence

Representative Sequence 3300003791|Ga0055530_10003440|Ga0055530_1000344010
Length 259
Sequence MSSTPPPLNVPRGWTAHQVASHLHHGRRGRSMTPASNTAPGGSGSRIAVLASGRGSNLQAIIDAIAAGTLDAEVVAVLSDKPDASALTKVAPDRRWARSPRDFADRATFDAAMGDALAGFAPDWVVCAGYMRILGEAFVQRFSGRLVNIHPSLLPLYKGLHTHARALEAGDAEAGASVHFVVPELDAGTVLAQARVPVLPGDTAEQLAQRVLAVEHPLLIASLQWLVGGRVTERNGQLEVDGNPLFSPLRLDCANQLTR

Samples

Sample ID Description Type Environment
1 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
8 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
9 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
25 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
36 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
37 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
38 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
41 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
42 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
66 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
67 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
68 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
69 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
70 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
71 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
74 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
80 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
81 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
82 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
83 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
84 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
85 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
86 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
87 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
88 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
89 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
90 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
91 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
92 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
93 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
94 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
95 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
96 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
97 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
98 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
99 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
100 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
101 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
114 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
115 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
116 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
117 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
118 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
121 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
122 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
125 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
149 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
150 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
151 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
152 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
153 2643221559 Lysobacter sp. Root559 Isolate Unclassified
154 2643221586 Lysobacter sp. Root667 Isolate Unclassified
155 2643221593 Lysobacter sp. Root690 Isolate Unclassified
156 2643221612 Lysobacter sp. Root76 Isolate Unclassified
157 2643221727 Lysobacter sp. Root96 Isolate Unclassified
158 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
159 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
160 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
161 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
162 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
163 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
164 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
165 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
166 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
167 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
168 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
169 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
170 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
171 2919675420 Luteimonas terrae 4099 Isolate Unclassified
172 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
173 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
174 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
175 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
176 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
177 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
178 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
179 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
180 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
181 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
182 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
183 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
184 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
185 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
186 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
187 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
188 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
189 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
190 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
191 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
192 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.76
Metatranscriptomes 0
Isolates 12.24

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 18.66
Nodule 0.29
Rhizoplane 3.21
Rhizosphere 47.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10003440 3300003791 Bacteria 8998
2 SwRhRL2b_contig_2400329 2162886007 Bacteria 3098
3 JGI25152J39213_1000164 3300002773 Bacteria 45374
4 JGI25150J39212_1000593 3300002774 Bacteria 14205
5 JGI25151J46595_10000070 3300003187 Bacteria 139035
6 JGI25151J46595_10000351 3300003187 Bacteria 49103
7 JGI25153J46596_10000219 3300003215 Bacteria 49103
8 Ga0055526_1000428 3300003771 Bacteria 33858
9 Ga0055537_1000017 3300003773 Bacteria 123856
10 Ga0055537_1000267 3300003773 Bacteria 38049
11 Ga0055524_1000280 3300003775 Bacteria 50037
12 Ga0055536_1007149 3300003781 Bacteria 5052
13 Ga0055536_1007225 3300003781 Bacteria 5010
14 Ga0055536_1009533 3300003781 Bacteria 3999
15 Ga0055534_1000163 3300003784 Bacteria 50001
16 Ga0055534_1000267 3300003784 Bacteria 36162
17 Ga0055528_1000182 3300003790 Bacteria 53454
18 Ga0055528_1000204 3300003790 Bacteria 50037
19 Ga0055530_10001486 3300003791 Bacteria 17027
20 Ga0055540_1020481 3300003792 Bacteria 1747
21 Ga0055531_10007274 3300003794 Bacteria 6077
22 Ga0055531_10009247 3300003794 Bacteria 5064
23 Ga0055531_10014266 3300003794 Bacteria 3591
24 Ga0065704_10014813 3300005289 Bacteria 1836
25 Ga0065704_10070357 3300005289 Bacteria 30374
26 Ga0070668_100003811 3300005347 Bacteria 11141
27 Ga0070678_100118227 3300005456 Bacteria 2086
28 Ga0070665_100138408 3300005548 Bacteria 2438
29 Ga0081539_10045135 3300005985 Bacteria 2537
30 Ga0075365_10113054 3300006038 Bacteria 1868
31 Ga0075363_100083120 3300006048 Bacteria 1754
32 Ga0075364_10000531 3300006051 Bacteria 19427
33 Ga0075364_10181502 3300006051 Bacteria 1424
34 Ga0075369_10024507 3300006186 Bacteria 2501
35 Ga0105251_10009409 3300009011 Bacteria 5772
36 Ga0105244_10031890 3300009036 Bacteria 2795
37 Ga0105243_10491788 3300009148 Bacteria 1160
38 Ga0105243_10491820 3300009148 Bacteria 1160
39 Ga0105032_100658 3300009979 Bacteria 3380
40 Ga0157373_10058749 3300013100 Bacteria 2726
41 Ga0157371_10000786 3300013102 Bacteria 36566
42 Ga0157371_10033694 3300013102 Bacteria 3678
43 Ga0157371_10033702 3300013102 Bacteria 3678
44 Ga0157370_10023815 3300013104 Bacteria 6074
45 Ga0157370_10180668 3300013104 Bacteria 1961
46 Ga0157370_10244281 3300013104 Bacteria 1661
47 Ga0157369_10025934 3300013105 Bacteria 6505
48 Ga0163162_10117200 3300013306 Bacteria 2764
49 Ga0182008_10001301 3300014497 Bacteria 17041
50 Ga0182008_10129398 3300014497 Bacteria 1258
51 Ga0182006_1014802 3300015261 Bacteria 3356
52 Ga0182006_1054034 3300015261 Bacteria 1538
53 Ga0182006_1058820 3300015261 Bacteria 1456
54 Ga0182007_10000048 3300015262 Bacteria 103024
55 Ga0182005_1000603 3300015265 Bacteria 17541
56 Ga0182005_1066907 3300015265 Bacteria 984
57 Ga0183360_10001 3300015689 Bacteria 3943671
58 Ga0183361_13850 3300016635 Bacteria 818
59 Ga0163161_10012225 3300017792 Bacteria 5954
60 Ga0163161_10013574 3300017792 Bacteria 5671
61 Ga0163161_10124786 3300017792 Bacteria 1937
62 Ga0207425_1000111 3300025245 Bacteria 77375
63 Ga0207425_1002986 3300025245 Bacteria 5644
64 Ga0209129_1000087 3300025258 Bacteria 179582
65 Ga0209565_1000005 3300025263 Bacteria 947317
66 Ga0209565_1000031 3300025263 Bacteria 320341
67 Ga0209673_1000011 3300025273 Bacteria 586604
68 Ga0209673_1000164 3300025273 Bacteria 138082
69 Ga0209675_1000004 3300025291 Bacteria 947166
70 Ga0209675_1000015 3300025291 Bacteria 403517
71 Ga0209676_1000037 3300025292 Bacteria 457562
72 Ga0209676_1000110 3300025292 Bacteria 214083
73 Ga0209676_1001028 3300025292 Bacteria 32470
74 Ga0209025_1000013 3300025294 Bacteria 871757
75 Ga0209025_1000023 3300025294 Bacteria 541307
76 Ga0209564_1000018 3300025295 Bacteria 586913
77 Ga0209564_1000037 3300025295 Bacteria 414794
78 Ga0209758_1000014 3300025297 Bacteria 871757
79 Ga0209758_1009908 3300025297 Bacteria 5810
80 Ga0209050_1000417 3300025298 Bacteria 78631
81 Ga0209050_1001410 3300025298 Bacteria 26010
82 Ga0209050_1018505 3300025298 Bacteria 2703
83 Ga0209050_1020204 3300025298 Bacteria 2488
84 Ga0209256_1000021 3300025299 Bacteria 537097
85 Ga0209256_1002876 3300025299 Bacteria 13070
86 Ga0209256_1006396 3300025299 Bacteria 6262
87 Ga0209051_1001882 3300025303 Bacteria 16414
88 Ga0209257_1000129 3300025304 Bacteria 214155
89 Ga0209257_1000476 3300025304 Bacteria 72955
90 Ga0209257_1000623 3300025304 Bacteria 57092
91 Ga0209257_1000670 3300025304 Bacteria 53641
92 Ga0209257_1002517 3300025304 Bacteria 18010
93 Ga0209257_1032652 3300025304 Bacteria 1647
94 Ga0207655_1047686 3300025728 Bacteria 1765
95 Ga0207713_1029035 3300025735 Bacteria 2484
96 Ga0207688_10116992 3300025901 Bacteria 1552
97 Ga0207680_10257474 3300025903 Bacteria 1207
98 Ga0207709_10048983 3300025935 Bacteria 2577
99 Ga0207709_10049526 3300025935 Bacteria 2565
100 Ga0207668_10018708 3300025972 Bacteria 4367
101 Ga0207640_10528803 3300025981 Bacteria 987
102 Ga0209371_1000004 3300027312 Bacteria 1098197
103 Ga0209371_1000011 3300027312 Bacteria 848456
104 Ga0209999_1003118 3300027543 Bacteria 2957
105 Ga0209983_1032556 3300027665 Bacteria 1114
106 Ga0209971_1000949 3300027682 Bacteria 7463
107 Ga0209971_1063145 3300027682 Bacteria 897
108 Ga0209974_10001293 3300027876 Bacteria 9005
109 Ga0307515_10162719 3300028794 Bacteria 2267
110 Ga0268256_1000005 3300030500 Bacteria 1082342
111 Ga0268256_1000011 3300030500 Bacteria 848625
112 Ga0316177_1080624 3300030731 Bacteria 7807
113 Ga0316176_1220650 3300030732 Bacteria 974
114 Ga0314311_1039315 3300030733 Bacteria 3152
115 Ga0314311_1065825 3300030733 Bacteria 7567
116 Ga0307513_10000456 3300031456 Bacteria 58897
117 Ga0307413_10076665 3300031824 Bacteria 2126
118 Ga0307410_10273150 3300031852 Bacteria 1323
119 Ga0307406_10004938 3300031901 Bacteria 7268
120 Ga0307406_10363606 3300031901 Bacteria 1135
121 Ga0307412_10008665 3300031911 Bacteria 5815
122 Ga0307412_10166493 3300031911 Bacteria 1644
123 Ga0307412_10419958 3300031911 Bacteria 1094
124 Ga0307409_100496299 3300031995 Bacteria 1188
125 Ga0307414_10001683 3300032004 Bacteria 11497
126 Ga0307414_10002500 3300032004 Bacteria 9642
127 Ga0307414_10008525 3300032004 Bacteria 5819
128 Ga0307414_10011546 3300032004 Bacteria 5184
129 Ga0307411_10271490 3300032005 Bacteria 1345
130 Ga0307415_100582021 3300032126 Bacteria 993
131 Ga0237819_00040 3300038705 Bacteria 45528
132 Ga0439436_0004463 3300041404 Bacteria 4290
133 Ga0439436_0006416 3300041404 Bacteria 3612
134 Ga0439439_0007412 3300041406 Bacteria 2566
135 Ga0439447_004486 3300041407 Bacteria 4789
136 Ga0439465_0004063 3300041413 Bacteria 4769
137 Ga0439465_0005429 3300041413 Bacteria 4067
138 Ga0439465_0009348 3300041413 Bacteria 3088
139 Ga0451787_769871 3300041441 Bacteria 1503
140 Ga0451789_0256277 3300041443 Bacteria 1090
141 Ga0451789_0273450 3300041443 Bacteria 1419
142 Ga0451791_0946317 3300041451 Bacteria 4270
143 Ga0451793_1155767 3300041452 Bacteria 1045
144 Ga0451800_0818039 3300041459 Bacteria 1069
145 Ga0451802_1617276 3300041460 Bacteria 1898
146 Ga0451837_0155006 3300041494 Bacteria 1194
147 Ga0451837_0552164 3300041494 Bacteria 918
148 Ga0451843_0260975 3300041509 Bacteria 3007
149 Ga0451843_0283924 3300041509 Bacteria 2221
150 Ga0439445_0002170 3300042004 Bacteria 4350
151 Ga0439445_0024471 3300042004 Bacteria 1536
152 Ga0439445_0031352 3300042004 Bacteria 1381
153 Ga0439432_018966 3300042006 Bacteria 2295
154 Ga0439432_044881 3300042006 Bacteria 1392
155 Ga0439449_0001262 3300042007 Bacteria 9915
156 Ga0439449_0010964 3300042007 Bacteria 3421
157 Ga0439449_0051369 3300042007 Bacteria 1524
158 Ga0439457_030045 3300042014 Bacteria 1204
159 Ga0439462_0035050 3300042015 Bacteria 1333
160 Ga0450911_002291 3300042115 Bacteria 3835
161 Ga0450904_004413 3300042139 Bacteria 1462
162 Ga0439434_0168447 3300042435 Bacteria 730
163 Ga0450901_006936 3300042533 Bacteria 1167
164 Ga0495627_013687 3300046453 Bacteria 2850
165 Ga0495627_024069 3300046453 Bacteria 1989
166 Ga0495638_0000881 3300046460 Bacteria 30946
167 Ga0495638_0035063 3300046460 Bacteria 3199
168 Ga0495638_0103344 3300046460 Bacteria 1701
169 Ga0495610_0010985 3300046512 Bacteria 5574
170 Ga0495610_0025679 3300046512 Bacteria 3157
171 Ga0495610_0037232 3300046512 Bacteria 2478
172 Ga0495616_0007402 3300046513 Bacteria 6568
173 Ga0495631_0017330 3300046518 Bacteria 3410
174 Ga0495643_0011418 3300046522 Bacteria 5409
175 Ga0495663_0002245 3300046525 Bacteria 5871
176 Ga0495663_0002792 3300046525 Bacteria 5167
177 Ga0495663_0003637 3300046525 Bacteria 4418
178 Ga0495663_0023066 3300046525 Bacteria 1800
179 Ga0495609_0083681 3300046538 Bacteria 1393
180 Ga0495633_0001931 3300046558 Bacteria 15087
181 Ga0495633_0012986 3300046558 Bacteria 4406
182 Ga0495633_0018199 3300046558 Bacteria 3572
183 Ga0495633_0067309 3300046558 Bacteria 1672
184 Ga0495668_0002791 3300046616 Bacteria 13910
185 Ga0495625_0032687 3300046660 Bacteria 3855
186 Ga0495625_0148073 3300046660 Bacteria 1579
187 Ga0495625_0162792 3300046660 Bacteria 1493
188 Ga0495671_0061029 3300046692 Bacteria 1860
189 Ga0495660_0013778 3300046810 Bacteria 4686
190 Ga0495672_0000090 3300047320 Bacteria 148367
191 Ga0495686_0046460 3300047472 Bacteria 2744
192 Ga0495686_0066420 3300047472 Bacteria 2228
193 Ga0496104_0245692 3300048907 Bacteria 1702
194 Ga0496105_0028318 3300048908 Bacteria 4582
195 Ga0496110_0190660 3300048913 Bacteria 1862
196 Ga0496114_0054187 3300048917 Bacteria 3345
197 Ga0496116_0014625 3300048919 Bacteria 6254
198 Ga0496116_0047582 3300048919 Bacteria 2886
199 Ga0496116_0055747 3300048919 Bacteria 2594
200 Ga0496116_0083710 3300048919 Bacteria 1968
201 Ga0496116_0102896 3300048919 Bacteria 1701
202 Ga0496116_0181489 3300048919 Bacteria 1126
203 Ga0496117_0000617 3300048920 Bacteria 57555
204 Ga0496117_0006304 3300048920 Bacteria 12069
205 Ga0496117_0024965 3300048920 Bacteria 4708
206 Ga0496117_0049466 3300048920 Bacteria 2990
207 Ga0496117_0166949 3300048920 Bacteria 1282
208 Ga0496117_0193644 3300048920 Bacteria 1155
209 Ga0496118_0000814 3300048921 Bacteria 49769
210 Ga0496118_0009570 3300048921 Bacteria 9757
211 Ga0496118_0024481 3300048921 Bacteria 5206
212 Ga0496118_0038439 3300048921 Bacteria 3835
213 Ga0496118_0052635 3300048921 Bacteria 3102
214 Ga0496118_0079280 3300048921 Bacteria 2318
215 Ga0496118_0100774 3300048921 Bacteria 1952
216 Ga0496118_0112800 3300048921 Bacteria 1798
217 Ga0496118_0185382 3300048921 Bacteria 1251
218 Ga0496118_0201426 3300048921 Bacteria 1178
219 Ga0496118_0218105 3300048921 Bacteria 1113
220 Ga0496119_0000329 3300048922 Bacteria 66425
221 Ga0496119_0046089 3300048922 Bacteria 2726
222 Ga0496119_0046558 3300048922 Bacteria 2707
223 Ga0496119_0087735 3300048922 Bacteria 1775
224 Ga0496120_0000147 3300048923 Bacteria 117881
225 Ga0496120_0044113 3300048923 Bacteria 2592
226 Ga0496121_0002594 3300048924 Bacteria 27284
227 Ga0496121_0013642 3300048924 Bacteria 8711
228 Ga0496121_0045535 3300048924 Bacteria 3768
229 Ga0496121_0050236 3300048924 Bacteria 3525
230 Ga0496121_0087812 3300048924 Bacteria 2439
231 Ga0496122_0007058 3300048925 Bacteria 12623
232 Ga0496122_0031518 3300048925 Bacteria 4410
233 Ga0496122_0051524 3300048925 Bacteria 3126
234 Ga0496122_0053042 3300048925 Bacteria 3061
235 Ga0496122_0061665 3300048925 Bacteria 2750
236 Ga0496122_0121254 3300048925 Bacteria 1685
237 Ga0496123_0000150 3300048926 Bacteria 142879
238 Ga0496123_0009802 3300048926 Bacteria 8555
239 Ga0496123_0053406 3300048926 Bacteria 2670
240 Ga0496123_0066082 3300048926 Bacteria 2293
241 Ga0496123_0068466 3300048926 Bacteria 2235
242 Ga0496123_0073294 3300048926 Bacteria 2124
243 Ga0496123_0074608 3300048926 Bacteria 2098
244 Ga0496123_0094633 3300048926 Bacteria 1759
245 Ga0496123_0108744 3300048926 Bacteria 1591
246 Ga0496124_0008785 3300048927 Bacteria 10494
247 Ga0496124_0012173 3300048927 Bacteria 8515
248 Ga0496124_0028782 3300048927 Bacteria 4962
249 Ga0496124_0047924 3300048927 Bacteria 3653
250 Ga0496124_0048437 3300048927 Bacteria 3632
251 Ga0496124_0051123 3300048927 Bacteria 3517
252 Ga0496124_0053676 3300048927 Bacteria 3414
253 Ga0496124_0057364 3300048927 Bacteria 3281
254 Ga0496124_0092941 3300048927 Bacteria 2456
255 Ga0496124_0172536 3300048927 Bacteria 1673
256 Ga0496124_0264522 3300048927 Bacteria 1263
257 Ga0496125_0006598 3300048928 Bacteria 12493
258 Ga0496125_0007076 3300048928 Bacteria 11983
259 Ga0496125_0029538 3300048928 Bacteria 4924
260 Ga0496125_0036801 3300048928 Bacteria 4265
261 Ga0496125_0063396 3300048928 Bacteria 2948
262 Ga0496125_0074554 3300048928 Bacteria 2630
263 Ga0496125_0141689 3300048928 Bacteria 1670
264 Ga0496126_0001694 3300048929 Bacteria 32787
265 Ga0496126_0031696 3300048929 Bacteria 4989
266 Ga0496126_0041369 3300048929 Bacteria 4266
267 Ga0496126_0067660 3300048929 Bacteria 3191
268 Ga0496126_0273080 3300048929 Bacteria 1402
269 Ga0496126_0448729 3300048929 Bacteria 1038
270 Ga0501031_0022460 3300049568 Bacteria 4111
271 Ga0501031_0154203 3300049568 Bacteria 1501
272 Ga0501032_0006613 3300049569 Bacteria 8514
273 Ga0501032_0015375 3300049569 Bacteria 5402
274 Ga0501033_0002109 3300049570 Bacteria 17214
275 Ga0501033_0282533 3300049570 Bacteria 1171
276 Ga0501034_0000552 3300049571 Bacteria 59397
277 Ga0501034_0000834 3300049571 Bacteria 45735
278 Ga0501034_0001875 3300049571 Bacteria 26665
279 Ga0501034_0023507 3300049571 Bacteria 6280
280 Ga0501034_0176225 3300049571 Bacteria 2104
281 Ga0501034_0290036 3300049571 Bacteria 1575
282 Ga0501034_0443163 3300049571 Bacteria 1217
283 Ga0501034_0549710 3300049571 Bacteria 1064
284 Ga0501036_0006795 3300049572 Bacteria 9295
285 Ga0501037_0022231 3300049573 Bacteria 4692
286 Ga0501038_0018278 3300049574 Bacteria 6328
287 Ga0501039_0021438 3300049575 Bacteria 4957
288 Ga0501043_0017744 3300049579 Bacteria 5580
289 Ga0501047_0056296 3300049581 Bacteria 3802
290 Ga0501225_0003798 3300049705 Bacteria 4536
291 Ga0501079_0097612 3300049741 Bacteria 2278
292 Ga0501079_0848677 3300049741 Bacteria 719
293 Ga0501080_0039567 3300049742 Bacteria 4400
294 Ga0501035_0014004 3300049822 Bacteria 7398
295 Ga0501044_0036998 3300049823 Bacteria 5103
296 nmdc:mga00v17_303_c1 3300050491 Bacteria 28389
297 nmdc:mga00v17_33811_c1 3300050491 Bacteria 3033
298 Ga0500583_0101005 3300053092 Bacteria 1413
299 Ga0500626_037476 3300053128 Bacteria 2193
300 Ga0500634_0000166 3300053161 Bacteria 22083
301 Ga0501084_1033116 3300054114 Bacteria 690
302 2547500416 2547132130 Bacteria 4660562
303 2578459324 2576861471 Bacteria 4648976
304 2643816560 2643221559 Bacteria 4424915
305 2643938760 2643221586 Bacteria 4446529
306 2643977968 2643221593 Bacteria 6296053
307 2644077496 2643221612 Bacteria 4361984
308 2644694189 2643221727 Bacteria 4415595
309 2747950568 2747842428 Bacteria 4689383
310 2748018175 2747842501 Bacteria 5293829
311 2765577993 2765235840 Bacteria 4663337
312 2816516059 2816332141 Bacteria 4436036
313 2842393751 2842391507 Bacteria 4486072
314 2842759240 2842757796 Bacteria 3981385
315 2852653280 2852649853 Bacteria 4036942
316 2852686543 2852684882 Bacteria 5463342
317 2857442846 2857442823 Bacteria 4562550
318 2874220643 2874220319 Bacteria 4594709
319 2919090658 2919089067 Bacteria 4560942
320 2919132711 2919130084 Bacteria 5301837
321 2919134699 2919134579 Bacteria 4480386
322 2919678288 2919675420 Bacteria 3969095
323 2923517552 2923516293 Bacteria 3716336
324 2928496654 2928496128 Bacteria 4631123
325 2929196880 2929195423 Bacteria 5325372
326 2931381724 2931380184 Bacteria 4455911
327 2937611475 2937610967 Bacteria 4618818
328 2939592067 2939589442 Bacteria 4214238
329 2939626302 2939622612 Bacteria 4698046
330 2939627403 2939626828 Bacteria 4695272
331 2941477085 2941475908 Bacteria 4145589
332 2941494309 2941489479 Bacteria 6313767
333 2961047408 2961047084 Bacteria 4594415
334 2961068198 2961064222 Bacteria 4749990
335 2974309760 2974307012 Bacteria 4172388
336 2977250507 2977247770 Bacteria 4160543
337 2984515026 2984514374 Bacteria 4172479
338 2987607800 2987605356 Bacteria 4187822
339 2995952931 2995948881 Bacteria 6358104
340 8002869684 8002869464 Bacteria 3588529
341 8021623812 8021622325 Bacteria 4844743
342 8021628407 8021626552 Bacteria 4665214
343 8021650327 8021648035 Bacteria 4772378
344 Ga0055530_10003440
345 SwRhRL2b_contig_2400329
346 JGI25152J39213_1000164
347 JGI25150J39212_1000593
348 JGI25151J46595_10000070
349 JGI25151J46595_10000351
350 JGI25153J46596_10000219
351 Ga0055526_1000428
352 Ga0055537_1000017
353 Ga0055537_1000267
354 Ga0055524_1000280
355 Ga0055536_1007149
356 Ga0055536_1007225
357 Ga0055536_1009533
358 Ga0055534_1000163
359 Ga0055534_1000267
360 Ga0055528_1000182
361 Ga0055528_1000204
362 Ga0055530_10001486
363 Ga0055540_1020481
364 Ga0055531_10007274
365 Ga0055531_10009247
366 Ga0055531_10014266
367 Ga0065704_10014813
368 Ga0065704_10070357
369 Ga0070668_100003811
370 Ga0070678_100118227
371 Ga0070665_100138408
372 Ga0081539_10045135
373 Ga0075365_10113054
374 Ga0075363_100083120
375 Ga0075364_10000531
376 Ga0075364_10181502
377 Ga0075369_10024507
378 Ga0105251_10009409
379 Ga0105244_10031890
380 Ga0105243_10491788
381 Ga0105243_10491820
382 Ga0105032_100658
383 Ga0157373_10058749
384 Ga0157371_10000786
385 Ga0157371_10033694
386 Ga0157371_10033702
387 Ga0157370_10023815
388 Ga0157370_10180668
389 Ga0157370_10244281
390 Ga0157369_10025934
391 Ga0163162_10117200
392 Ga0182008_10001301
393 Ga0182008_10129398
394 Ga0182006_1014802
395 Ga0182006_1054034
396 Ga0182006_1058820
397 Ga0182007_10000048
398 Ga0182005_1000603
399 Ga0182005_1066907
400 Ga0183360_10001
401 Ga0183361_13850
402 Ga0163161_10012225
403 Ga0163161_10013574
404 Ga0163161_10124786
405 Ga0207425_1000111
406 Ga0207425_1002986
407 Ga0209129_1000087
408 Ga0209565_1000005
409 Ga0209565_1000031
410 Ga0209673_1000011
411 Ga0209673_1000164
412 Ga0209675_1000004
413 Ga0209675_1000015
414 Ga0209676_1000037
415 Ga0209676_1000110
416 Ga0209676_1001028
417 Ga0209025_1000013
418 Ga0209025_1000023
419 Ga0209564_1000018
420 Ga0209564_1000037
421 Ga0209758_1000014
422 Ga0209758_1009908
423 Ga0209050_1000417
424 Ga0209050_1001410
425 Ga0209050_1018505
426 Ga0209050_1020204
427 Ga0209256_1000021
428 Ga0209256_1002876
429 Ga0209256_1006396
430 Ga0209051_1001882
431 Ga0209257_1000129
432 Ga0209257_1000476
433 Ga0209257_1000623
434 Ga0209257_1000670
435 Ga0209257_1002517
436 Ga0209257_1032652
437 Ga0207655_1047686
438 Ga0207713_1029035
439 Ga0207688_10116992
440 Ga0207680_10257474
441 Ga0207709_10048983
442 Ga0207709_10049526
443 Ga0207668_10018708
444 Ga0207640_10528803
445 Ga0209371_1000004
446 Ga0209371_1000011
447 Ga0209999_1003118
448 Ga0209983_1032556
449 Ga0209971_1000949
450 Ga0209971_1063145
451 Ga0209974_10001293
452 Ga0307515_10162719
453 Ga0268256_1000005
454 Ga0268256_1000011
455 Ga0316177_1080624
456 Ga0316176_1220650
457 Ga0314311_1039315
458 Ga0314311_1065825
459 Ga0307513_10000456
460 Ga0307413_10076665
461 Ga0307410_10273150
462 Ga0307406_10004938
463 Ga0307406_10363606
464 Ga0307412_10008665
465 Ga0307412_10166493
466 Ga0307412_10419958
467 Ga0307409_100496299
468 Ga0307414_10001683
469 Ga0307414_10002500
470 Ga0307414_10008525
471 Ga0307414_10011546
472 Ga0307411_10271490
473 Ga0307415_100582021
474 Ga0237819_00040
475 Ga0439436_0004463
476 Ga0439436_0006416
477 Ga0439439_0007412
478 Ga0439447_004486
479 Ga0439465_0004063
480 Ga0439465_0005429
481 Ga0439465_0009348
482 Ga0451787_769871
483 Ga0451789_0256277
484 Ga0451789_0273450
485 Ga0451791_0946317
486 Ga0451793_1155767
487 Ga0451800_0818039
488 Ga0451802_1617276
489 Ga0451837_0155006
490 Ga0451837_0552164
491 Ga0451843_0260975
492 Ga0451843_0283924
493 Ga0439445_0002170
494 Ga0439445_0024471
495 Ga0439445_0031352
496 Ga0439432_018966
497 Ga0439432_044881
498 Ga0439449_0001262
499 Ga0439449_0010964
500 Ga0439449_0051369
501 Ga0439457_030045
502 Ga0439462_0035050
503 Ga0450911_002291
504 Ga0450904_004413
505 Ga0439434_0168447
506 Ga0450901_006936
507 Ga0495627_013687
508 Ga0495627_024069
509 Ga0495638_0000881
510 Ga0495638_0035063
511 Ga0495638_0103344
512 Ga0495610_0010985
513 Ga0495610_0025679
514 Ga0495610_0037232
515 Ga0495616_0007402
516 Ga0495631_0017330
517 Ga0495643_0011418
518 Ga0495663_0002245
519 Ga0495663_0002792
520 Ga0495663_0003637
521 Ga0495663_0023066
522 Ga0495609_0083681
523 Ga0495633_0001931
524 Ga0495633_0012986
525 Ga0495633_0018199
526 Ga0495633_0067309
527 Ga0495668_0002791
528 Ga0495625_0032687
529 Ga0495625_0148073
530 Ga0495625_0162792
531 Ga0495671_0061029
532 Ga0495660_0013778
533 Ga0495672_0000090
534 Ga0495686_0046460
535 Ga0495686_0066420
536 Ga0496104_0245692
537 Ga0496105_0028318
538 Ga0496110_0190660
539 Ga0496114_0054187
540 Ga0496116_0014625
541 Ga0496116_0047582
542 Ga0496116_0055747
543 Ga0496116_0083710
544 Ga0496116_0102896
545 Ga0496116_0181489
546 Ga0496117_0000617
547 Ga0496117_0006304
548 Ga0496117_0024965
549 Ga0496117_0049466
550 Ga0496117_0166949
551 Ga0496117_0193644
552 Ga0496118_0000814
553 Ga0496118_0009570
554 Ga0496118_0024481
555 Ga0496118_0038439
556 Ga0496118_0052635
557 Ga0496118_0079280
558 Ga0496118_0100774
559 Ga0496118_0112800
560 Ga0496118_0185382
561 Ga0496118_0201426
562 Ga0496118_0218105
563 Ga0496119_0000329
564 Ga0496119_0046089
565 Ga0496119_0046558
566 Ga0496119_0087735
567 Ga0496120_0000147
568 Ga0496120_0044113
569 Ga0496121_0002594
570 Ga0496121_0013642
571 Ga0496121_0045535
572 Ga0496121_0050236
573 Ga0496121_0087812
574 Ga0496122_0007058
575 Ga0496122_0031518
576 Ga0496122_0051524
577 Ga0496122_0053042
578 Ga0496122_0061665
579 Ga0496122_0121254
580 Ga0496123_0000150
581 Ga0496123_0009802
582 Ga0496123_0053406
583 Ga0496123_0066082
584 Ga0496123_0068466
585 Ga0496123_0073294
586 Ga0496123_0074608
587 Ga0496123_0094633
588 Ga0496123_0108744
589 Ga0496124_0008785
590 Ga0496124_0012173
591 Ga0496124_0028782
592 Ga0496124_0047924
593 Ga0496124_0048437
594 Ga0496124_0051123
595 Ga0496124_0053676
596 Ga0496124_0057364
597 Ga0496124_0092941
598 Ga0496124_0172536
599 Ga0496124_0264522
600 Ga0496125_0006598
601 Ga0496125_0007076
602 Ga0496125_0029538
603 Ga0496125_0036801
604 Ga0496125_0063396
605 Ga0496125_0074554
606 Ga0496125_0141689
607 Ga0496126_0001694
608 Ga0496126_0031696
609 Ga0496126_0041369
610 Ga0496126_0067660
611 Ga0496126_0273080
612 Ga0496126_0448729
613 Ga0501031_0022460
614 Ga0501031_0154203
615 Ga0501032_0006613
616 Ga0501032_0015375
617 Ga0501033_0002109
618 Ga0501033_0282533
619 Ga0501034_0000552
620 Ga0501034_0000834
621 Ga0501034_0001875
622 Ga0501034_0023507
623 Ga0501034_0176225
624 Ga0501034_0290036
625 Ga0501034_0443163
626 Ga0501034_0549710
627 Ga0501036_0006795
628 Ga0501037_0022231
629 Ga0501038_0018278
630 Ga0501039_0021438
631 Ga0501043_0017744
632 Ga0501047_0056296
633 Ga0501225_0003798
634 Ga0501079_0097612
635 Ga0501079_0848677
636 Ga0501080_0039567
637 Ga0501035_0014004
638 Ga0501044_0036998
639 nmdc:mga00v17_303_c1
640 nmdc:mga00v17_33811_c1
641 Ga0500583_0101005
642 Ga0500626_037476
643 Ga0500634_0000166
644 Ga0501084_1033116
645 2547500416
646 2578459324
647 2643816560
648 2643938760
649 2643977968
650 2644077496
651 2644694189
652 2747950568
653 2748018175
654 2765577993
655 2816516059
656 2842393751
657 2842759240
658 2852653280
659 2852686543
660 2857442846
661 2874220643
662 2919090658
663 2919132711
664 2919134699
665 2919678288
666 2923517552
667 2928496654
668 2929196880
669 2931381724
670 2937611475
671 2939592067
672 2939626302
673 2939627403
674 2941477085
675 2941494309
676 2961047408
677 2961068198
678 2974309760
679 2977250507
680 2984515026
681 2987607800
682 2995952931
683 8002869684
684 8021623812
685 8021628407
686 8021650327

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

45

223

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1c2t-assembly1.cif.gz_A new insights into inhibitor design from the crystal structure and nmr studies of e. coli gar transformylase in complex with beta-gar and 10-formyl-5,8,10-trideazafolic acid. 0.9665 4 204
3gar-assembly1.cif.gz_A-2 a ph-dependent stablization of an active site loop observed from low and high ph crystal structures of mutant monomeric glycinamide ribonucleotide transformylase 0.9607 4 203
1grc-assembly1.cif.gz_A crystal structure of glycinamide ribonucleotide transformylase from escherichia coli at 3.0 angstroms resolution: a target enzyme for chemotherapy 0.9412 4 203
4zyv-assembly1.cif.gz_A human gar transformylase in complex with gar and n-({5-[(2-amino-4-oxo-4,7-dihydro-3h-pyrrolo[2,3-d]pyrimidin-6-yl)butyl]thiophen-2-yl}carbonyl)-l-glutamic acid (agf71) 0.9411 3 198
3auf-assembly1.cif.gz_A-2 crystal structure of glycinamide ribonucleotide transformylase 1 from symbiobacterium toebii 0.9409 2 198
ID Description Score Start End Superfamily
1njsA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9432 3 198 3.40.50.170
3aufA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9409 2 198 3.40.50.170
af_Q2FZI7_1_188_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9405 3 182 3.40.50.170
4s1nA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9316 4 182 3.40.50.170
af_Q20143_783_975_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9284 3 187 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A357KNQ0-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9875 102 209 GO:0004644
GO:0005829
GO:0006189
AF-A0A2V6BKH7-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) (5'-phosphoribosylglycinamide transformylase) (GAR transformylase) 0.9836 83 177 GO:0004644
GO:0005829
GO:0006189
AF-A0A537M9X3-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9775 73 174 GO:0004644
GO:0005829
GO:0006189
AF-A0A3A5UVQ9-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9775 75 187 GO:0004644
GO:0005829
GO:0006189
AF-A0A538L222-F1-model_v4 phosphoribosylglycinamide formyltransferase 1 (EC 2.1.2.2) 0.9738 59 169 GO:0004644
GO:0005829
GO:0006189

Map