F415472

General Info

Members Datasets Scaffolds Average Seq Length
343 212 686 310

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100028290|Ga0070678_1000282903
Length 366
Sequence MVPFRLRTLRCGVEAIFSRGGARWCFEVKVSFLRNSRARPVLVAGFCALALAACASNNKKKPRLAYEERPVELLYATGADRLDRHQWAQAVDYFQEVERQHPYSEWSRRAILMQAYAHYQANNYAEAIGDADRFISLYPGNSTAAYAHYLKAICYFEQIVDVGRDQAATGQALDNLREVTQRYPRTEYASDARLKIDMVNDQLAGKEMTIGRYYLRQGDTLAAVGRFKTVVDRYQTTSHTPEALYRLVEAYLTLGLLDEARKNGAVLGYNYPGDGWYVDAYKLLTSKGLRPAVEPSGNKRGFFHVPFTKDKATTVKPPAAGLTPGQAMAPKKDAAATTATVTKDTKDPNAPAPKKHGWFHIPFTKD

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
7 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
8 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
53 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
100 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
101 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
102 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
107 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
115 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
118 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
119 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
120 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
125 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
139 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
147 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
148 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
151 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
152 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
153 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
162 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
163 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
164 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
165 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
166 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
167 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
168 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
169 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
170 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
171 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
172 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
173 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
174 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
175 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
178 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
179 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
180 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
183 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
184 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
185 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
186 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
187 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
190 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
191 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
192 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
193 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
194 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
195 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
196 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
197 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
198 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
199 2643221583 Caulobacter sp. Root655 Isolate Unclassified
200 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
201 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
202 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
203 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
204 2818991435 Caulobacter henricii 536 Isolate Unclassified
205 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
206 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
207 2849560528 Caulobacter zeae 410 Isolate Unclassified
208 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
209 2851153111 Caulobacter radicis 736 Isolate Unclassified
210 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
211 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
212 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.46
Metatranscriptomes 0
Isolates 5.54

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.57
Nodule 0
Rhizoplane 2.33
Rhizosphere 67.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100028290 3300005456 Bacteria 3821
2 JGI25153J46596_10018089 3300003215 Bacteria 2750
3 JGI25153J46596_10022800 3300003215 Bacteria 2297
4 rootH2_10059183 3300003320 Bacteria 5508
5 rootL2_10007973 3300003322 Bacteria 3334
6 rootH1_10063031 3300003323 Bacteria 4702
7 rootH1_10078753 3300003323 Bacteria 2623
8 Ga0055530_10000325 3300003791 Bacteria 43139
9 Ga0055531_10002001 3300003794 Bacteria 14153
10 Ga0055531_10002894 3300003794 Bacteria 11174
11 Ga0055531_10037067 3300003794 Bacteria 1490
12 Ga0065165_1000327 3300005262 Bacteria 77666
13 Ga0065165_1001153 3300005262 Bacteria 30846
14 Ga0070658_10049293 3300005327 Bacteria 3411
15 Ga0070680_100012545 3300005336 Bacteria 6587
16 Ga0070660_100109227 3300005339 Bacteria 2199
17 Ga0070691_10003775 3300005341 Bacteria 6846
18 Ga0070668_100000162 3300005347 Bacteria 42486
19 Ga0070668_100002433 3300005347 Bacteria 13697
20 Ga0070668_100003126 3300005347 Bacteria 12233
21 Ga0070668_100005775 3300005347 Bacteria 9180
22 Ga0070668_100032406 3300005347 Bacteria 3977
23 Ga0070669_100028022 3300005353 Bacteria 4055
24 Ga0070669_100040370 3300005353 Bacteria 3392
25 Ga0070671_100213306 3300005355 Bacteria 1637
26 Ga0070671_100339650 3300005355 Bacteria 1281
27 Ga0070659_100002252 3300005366 Bacteria 13735
28 Ga0070659_100013191 3300005366 Bacteria 6146
29 Ga0070667_100000206 3300005367 Bacteria 69487
30 Ga0070667_100002825 3300005367 Bacteria 14992
31 Ga0070667_100013969 3300005367 Bacteria 6636
32 Ga0070662_100250353 3300005457 Bacteria 1424
33 Ga0070681_10023690 3300005458 Bacteria 6179
34 Ga0070681_10038139 3300005458 Bacteria 4818
35 Ga0070681_10062055 3300005458 Bacteria 3712
36 Ga0070679_100025384 3300005530 Bacteria 5815
37 Ga0070679_100238299 3300005530 Bacteria 1777
38 Ga0068853_100009173 3300005539 Bacteria 7969
39 Ga0068853_100080734 3300005539 Bacteria 2846
40 Ga0068853_100235309 3300005539 Bacteria 1677
41 Ga0070665_100000353 3300005548 Bacteria 69165
42 Ga0070665_100001636 3300005548 Bacteria 25820
43 Ga0070665_100004050 3300005548 Bacteria 15410
44 Ga0070665_100044844 3300005548 Bacteria 4439
45 Ga0070665_100101450 3300005548 Bacteria 2882
46 Ga0068855_100012297 3300005563 Bacteria 10342
47 Ga0068855_100104488 3300005563 Bacteria 3258
48 Ga0068859_100000075 3300005617 Bacteria 91974
49 Ga0068859_100022617 3300005617 Bacteria 6304
50 Ga0068859_100032448 3300005617 Bacteria 5246
51 Ga0068864_100000167 3300005618 Bacteria 60640
52 Ga0068864_100014536 3300005618 Bacteria 6540
53 Ga0068861_100054785 3300005719 Bacteria 3039
54 Ga0068861_100167294 3300005719 Bacteria 1819
55 Ga0068863_100004050 3300005841 Bacteria 14470
56 Ga0068863_100007182 3300005841 Bacteria 10931
57 Ga0068863_100033574 3300005841 Bacteria 4889
58 Ga0068858_100002500 3300005842 Bacteria 18548
59 Ga0068858_100009819 3300005842 Bacteria 9107
60 Ga0068860_100000423 3300005843 Bacteria 54500
61 Ga0068860_100014420 3300005843 Bacteria 7742
62 Ga0068862_100005034 3300005844 Bacteria 11122
63 Ga0068862_100007971 3300005844 Bacteria 8761
64 Ga0068862_100009436 3300005844 Bacteria 8072
65 Ga0068862_100087393 3300005844 Bacteria 2712
66 Ga0075365_10192507 3300006038 Bacteria 1427
67 Ga0075363_100031732 3300006048 Bacteria 2741
68 Ga0068865_100030796 3300006881 Bacteria 3572
69 Ga0097620_100000075 3300006931 Bacteria 91974
70 Ga0097620_100022617 3300006931 Bacteria 6304
71 Ga0097620_100032448 3300006931 Bacteria 5246
72 Ga0105240_10002463 3300009093 Bacteria 29749
73 Ga0105240_10141597 3300009093 Bacteria 2874
74 Ga0105240_10231248 3300009093 Bacteria 2149
75 Ga0105240_10238955 3300009093 Bacteria 2107
76 Ga0105248_10001123 3300009177 Bacteria 29791
77 Ga0105248_10021096 3300009177 Bacteria 7219
78 Ga0105248_10051475 3300009177 Bacteria 4621
79 Ga0105237_10363876 3300009545 Bacteria 1451
80 Ga0105238_10100856 3300009551 Bacteria 2869
81 Ga0105249_10044033 3300009553 Bacteria 4059
82 Ga0157373_10002157 3300013100 Bacteria 14894
83 Ga0157369_10079362 3300013105 Bacteria 3515
84 Ga0163162_10027209 3300013306 Bacteria 5654
85 Ga0163162_10084954 3300013306 Bacteria 3241
86 Ga0157372_10063914 3300013307 Bacteria 4129
87 Ga0157375_10327320 3300013308 Bacteria 1697
88 Ga0163163_10015639 3300014325 Bacteria 7022
89 Ga0163163_10069406 3300014325 Bacteria 3508
90 Ga0157380_10143009 3300014326 Bacteria 2058
91 Ga0157379_10000104 3300014968 Bacteria 57987
92 Ga0157379_10015427 3300014968 Bacteria 6703
93 Ga0157379_10119558 3300014968 Bacteria 2370
94 Ga0183365_10001 3300015684 Bacteria 2090444
95 Ga0213875_10042433 3300021388 Bacteria 2137
96 Ga0209676_1000099 3300025292 Bacteria 230048
97 Ga0209676_1000180 3300025292 Bacteria 148369
98 Ga0209564_1005511 3300025295 Bacteria 7180
99 Ga0209758_1002918 3300025297 Bacteria 16480
100 Ga0209758_1004483 3300025297 Bacteria 11599
101 Ga0209050_1000038 3300025298 Bacteria 412635
102 Ga0209050_1000319 3300025298 Bacteria 96837
103 Ga0209050_1022996 3300025298 Bacteria 2210
104 Ga0209256_1024010 3300025299 Bacteria 1805
105 Ga0209051_1001724 3300025303 Bacteria 17462
106 Ga0209257_1000408 3300025304 Bacteria 83362
107 Ga0209257_1001267 3300025304 Bacteria 31015
108 Ga0209257_1003216 3300025304 Bacteria 14408
109 Ga0207705_10005904 3300025909 Bacteria 9106
110 Ga0207707_10169662 3300025912 Bacteria 1907
111 Ga0207707_10196491 3300025912 Bacteria 1759
112 Ga0207695_10004247 3300025913 Bacteria 19682
113 Ga0207695_10004557 3300025913 Bacteria 18841
114 Ga0207695_10008534 3300025913 Bacteria 12807
115 Ga0207695_10054938 3300025913 Bacteria 4154
116 Ga0207695_10086605 3300025913 Bacteria 3159
117 Ga0207671_10130183 3300025914 Bacteria 1931
118 Ga0207660_10013911 3300025917 Bacteria 5281
119 Ga0207660_10080785 3300025917 Bacteria 2388
120 Ga0207657_10005646 3300025919 Bacteria 13055
121 Ga0207652_10003052 3300025921 Bacteria 13975
122 Ga0207681_10025693 3300025923 Bacteria 3791
123 Ga0207694_10144818 3300025924 Bacteria 1912
124 Ga0207650_10000031 3300025925 Bacteria 230128
125 Ga0207644_10027849 3300025931 Bacteria 3906
126 Ga0207690_10010089 3300025932 Bacteria 5611
127 Ga0207704_10026376 3300025938 Bacteria 3188
128 Ga0207711_10014100 3300025941 Bacteria 6641
129 Ga0207689_10014452 3300025942 Bacteria 6715
130 Ga0207679_10010887 3300025945 Bacteria 5865
131 Ga0207667_10009040 3300025949 Bacteria 11783
132 Ga0207667_10044856 3300025949 Bacteria 4684
133 Ga0207667_10132605 3300025949 Bacteria 2566
134 Ga0207712_10025767 3300025961 Bacteria 3911
135 Ga0207668_10000018 3300025972 Bacteria 158577
136 Ga0207668_10000409 3300025972 Bacteria 27040
137 Ga0207668_10001774 3300025972 Bacteria 12598
138 Ga0207668_10012614 3300025972 Bacteria 5179
139 Ga0207658_10001371 3300025986 Bacteria 19025
140 Ga0207677_10111275 3300026023 Bacteria 2040
141 Ga0207703_10006774 3300026035 Bacteria 9138
142 Ga0207703_10104906 3300026035 Bacteria 2402
143 Ga0207639_10057510 3300026041 Bacteria 2986
144 Ga0207639_10241203 3300026041 Bacteria 1572
145 Ga0207702_10022409 3300026078 Bacteria 5237
146 Ga0207702_10029381 3300026078 Bacteria 4573
147 Ga0207641_10000954 3300026088 Bacteria 29721
148 Ga0207641_10018473 3300026088 Bacteria 5716
149 Ga0207641_10174037 3300026088 Bacteria 1967
150 Ga0207641_10413605 3300026088 Bacteria 1297
151 Ga0207676_10000189 3300026095 Bacteria 54046
152 Ga0207676_10011745 3300026095 Bacteria 6262
153 Ga0207675_100210763 3300026118 Bacteria 1868
154 Ga0209981_1000291 3300027378 Bacteria 6387
155 Ga0210000_1004528 3300027462 Bacteria 2004
156 Ga0209999_1017891 3300027543 Bacteria 1295
157 Ga0209983_1017724 3300027665 Bacteria 1475
158 Ga0268266_10000062 3300028379 Bacteria 253490
159 Ga0268266_10001993 3300028379 Bacteria 22852
160 Ga0268266_10008159 3300028379 Bacteria 9348
161 Ga0268266_10033841 3300028379 Bacteria 4343
162 Ga0268266_10113870 3300028379 Bacteria 2399
163 Ga0268265_10001469 3300028380 Bacteria 19805
164 Ga0268265_10011582 3300028380 Bacteria 5963
165 Ga0268265_10046998 3300028380 Bacteria 3230
166 Ga0268265_10066584 3300028380 Bacteria 2785
167 Ga0268265_10125997 3300028380 Bacteria 2119
168 Ga0268264_10000361 3300028381 Bacteria 67632
169 Ga0268264_10007822 3300028381 Bacteria 8894
170 Ga0307517_10021518 3300028786 Bacteria 8140
171 Ga0307517_10040637 3300028786 Bacteria 5056
172 Ga0307517_10071259 3300028786 Bacteria 3118
173 Ga0265338_10096881 3300028800 Bacteria 2419
174 Ga0265338_10135174 3300028800 Bacteria 1940
175 Ga0307511_10097791 3300030521 Bacteria 1947
176 Ga0265327_10000708 3300031251 Bacteria 52766
177 Ga0265327_10000946 3300031251 Bacteria 42232
178 Ga0307513_10007827 3300031456 Bacteria 13779
179 Ga0307513_10085695 3300031456 Bacteria 3232
180 Ga0307413_10017954 3300031824 Bacteria 3698
181 Ga0307409_100063677 3300031995 Bacteria 2893
182 Ga0307411_10086387 3300032005 Bacteria 2176
183 Ga0395899_0000311 3300037312 Bacteria 62323
184 Ga0395900_0000004 3300037418 Bacteria 564908
185 Ga0395900_0029268 3300037418 Bacteria 5650
186 Ga0395898_0011695 3300037466 Bacteria 9101
187 Ga0395905_0000234 3300037471 Bacteria 83778
188 Ga0395905_0314868 3300037471 Bacteria 1454
189 Ga0395905_0470918 3300037471 Bacteria 1155
190 Ga0436364_1178475 3300037853 Bacteria 4312
191 Ga0395901_0000005 3300038443 Bacteria 544998
192 Ga0436365_0215846 3300039437 Bacteria 49725
193 Ga0439446_0009224 3300042156 Bacteria 2636
194 Ga0466969_0000771 3300044656 Bacteria 17443
195 Ga0466966_0001130 3300044684 Bacteria 17143
196 Ga0466961_0062015 3300044693 Bacteria 2376
197 Ga0466971_0020150 3300044719 Bacteria 2964
198 Ga0466971_0081339 3300044719 Bacteria 1477
199 Ga0466957_0022971 3300044842 Bacteria 3682
200 Ga0466959_0004557 3300045049 Bacteria 9297
201 Ga0466958_0018308 3300045836 Bacteria 4063
202 Ga0495627_001187 3300046453 Bacteria 16485
203 Ga0495638_0000612 3300046460 Bacteria 39869
204 Ga0495638_0000764 3300046460 Bacteria 34208
205 Ga0495638_0051424 3300046460 Bacteria 2569
206 Ga0495650_0000020 3300046471 Bacteria 533839
207 Ga0495594_0152589 3300046499 Bacteria 1312
208 Ga0495583_0000069 3300046506 Bacteria 186863
209 Ga0495606_0003363 3300046507 Bacteria 17047
210 Ga0495610_0000092 3300046512 Bacteria 105874
211 Ga0495610_0004031 3300046512 Bacteria 11066
212 Ga0495610_0032570 3300046512 Bacteria 2706
213 Ga0495616_0000210 3300046513 Bacteria 48630
214 Ga0495620_0011367 3300046515 Bacteria 4644
215 Ga0495620_0054233 3300046515 Bacteria 1694
216 Ga0495631_0019899 3300046518 Bacteria 3142
217 Ga0495632_0015067 3300046519 Bacteria 4348
218 Ga0495637_0036846 3300046520 Bacteria 2127
219 Ga0495643_0016755 3300046522 Bacteria 4301
220 Ga0495648_0000399 3300046524 Bacteria 47763
221 Ga0495648_0042955 3300046524 Bacteria 2839
222 Ga0495663_0030682 3300046525 Bacteria 1594
223 Ga0495642_0057131 3300046528 Bacteria 1613
224 Ga0495654_0000010 3300046530 Bacteria 378481
225 Ga0495654_0062923 3300046530 Bacteria 1778
226 Ga0495622_0001464 3300046557 Bacteria 11882
227 Ga0495668_0007611 3300046616 Bacteria 6901
228 Ga0495668_0009746 3300046616 Bacteria 5869
229 Ga0495668_0097925 3300046616 Bacteria 1605
230 Ga0495668_0125297 3300046616 Bacteria 1406
231 Ga0495625_0000295 3300046660 Bacteria 77306
232 Ga0495625_0071448 3300046660 Bacteria 2435
233 Ga0495669_0000004 3300046684 Bacteria 208878
234 Ga0495669_0000273 3300046684 Bacteria 29493
235 Ga0495672_0003946 3300047320 Bacteria 12420
236 Ga0495683_0026596 3300047323 Bacteria 2961
237 Ga0495677_0007886 3300047445 Bacteria 3962
238 Ga0495673_0000403 3300047469 Bacteria 50650
239 Ga0495681_0047849 3300047470 Bacteria 2032
240 Ga0495686_0000765 3300047472 Bacteria 42391
241 Ga0495686_0001833 3300047472 Bacteria 21383
242 Ga0495686_0007282 3300047472 Bacteria 8318
243 Ga0495686_0017141 3300047472 Bacteria 4889
244 Ga0495593_0057302 3300047673 Bacteria 2046
245 Ga0496101_0075519 3300048904 Bacteria 2481
246 Ga0496102_0028467 3300048905 Bacteria 4991
247 Ga0496102_0105064 3300048905 Bacteria 2627
248 Ga0496107_0000037 3300048910 Bacteria 78089
249 Ga0496107_0021397 3300048910 Bacteria 4571
250 Ga0496109_0074842 3300048912 Bacteria 3113
251 Ga0496112_0108584 3300048915 Bacteria 2745
252 Ga0496115_0076111 3300048918 Bacteria 2727
253 Ga0496121_0005027 3300048924 Bacteria 17291
254 Ga0496124_0011339 3300048927 Bacteria 8914
255 Ga0496126_0008930 3300048929 Bacteria 10731
256 Ga0495678_002284 3300049459 Bacteria 13294
257 Ga0495682_0052641 3300049460 Bacteria 1479
258 Ga0501033_0203958 3300049570 Bacteria 1412
259 Ga0501033_0219089 3300049570 Bacteria 1355
260 Ga0501034_0278671 3300049571 Bacteria 1612
261 Ga0501034_0296523 3300049571 Bacteria 1554
262 Ga0501037_0208830 3300049573 Bacteria 1378
263 Ga0501047_0000478 3300049581 Bacteria 43581
264 Ga0501047_0035901 3300049581 Bacteria 4789
265 Ga0501047_0272348 3300049581 Bacteria 1539
266 Ga0501257_023454 3300049686 Bacteria 1463
267 Ga0501083_0225119 3300049744 Bacteria 1222
268 Ga0501035_0007513 3300049822 Bacteria 10183
269 Ga0501035_0221501 3300049822 Bacteria 1615
270 Ga0501044_0003994 3300049823 Bacteria 16520
271 Ga0501044_0011249 3300049823 Bacteria 9701
272 Ga0501044_0369926 3300049823 Bacteria 1350
273 nmdc:mga03n38_61616_c1 3300050490 Bacteria 1709
274 nmdc:mga03n38_73199_c1 3300050490 Bacteria 1590
275 nmdc:mga06z11_4063_c1 3300050494 Bacteria 5719
276 nmdc:mga04h51_1772_c1 3300050495 Bacteria 5050
277 nmdc:mga07m45_10519_c1 3300050496 Bacteria 4835
278 nmdc:mga0sz30_2139_c1 3300050516 Bacteria 7060
279 Ga0500635_0000020 3300053080 Bacteria 110196
280 Ga0500635_0004186 3300053080 Bacteria 3696
281 Ga0500578_0000080 3300053086 Bacteria 106387
282 Ga0500643_002438 3300053087 Bacteria 9613
283 Ga0500643_010302 3300053087 Bacteria 3491
284 Ga0500644_0000218 3300053088 Bacteria 33235
285 Ga0500583_0046312 3300053092 Bacteria 2001
286 Ga0500566_0025996 3300053094 Bacteria 3428
287 Ga0500641_0006538 3300053096 Bacteria 4134
288 Ga0500641_0046589 3300053096 Bacteria 1770
289 Ga0500641_0049858 3300053096 Bacteria 1719
290 Ga0500556_0001075 3300053104 Bacteria 13800
291 Ga0500556_0015367 3300053104 Bacteria 2359
292 Ga0500556_0018258 3300053104 Bacteria 2210
293 Ga0500562_008647 3300053108 Bacteria 2573
294 Ga0500594_0000590 3300053118 Bacteria 7784
295 Ga0500595_015913 3300053119 Bacteria 2812
296 Ga0500595_021904 3300053119 Bacteria 2273
297 Ga0500607_042836 3300053121 Bacteria 2443
298 Ga0500608_000062 3300053122 Bacteria 46850
299 Ga0500608_000253 3300053122 Bacteria 20968
300 Ga0500608_015309 3300053122 Bacteria 3443
301 Ga0500614_001347 3300053123 Bacteria 5914
302 Ga0500618_000533 3300053125 Bacteria 23792
303 Ga0500559_0002072 3300053136 Bacteria 10723
304 Ga0500559_0044394 3300053136 Bacteria 1944
305 Ga0500559_0047033 3300053136 Bacteria 1894
306 Ga0500564_000127 3300053138 Bacteria 19327
307 Ga0500577_0002029 3300053142 Bacteria 5185
308 Ga0500590_021671 3300053148 Bacteria 3334
309 Ga0500616_0024627 3300053153 Bacteria 3342
310 Ga0500619_060261 3300053154 Bacteria 1247
311 Ga0500620_069365 3300053155 Bacteria 1211
312 Ga0500622_0000812 3300053156 Bacteria 26774
313 Ga0500622_0007466 3300053156 Bacteria 6208
314 Ga0500622_0043469 3300053156 Bacteria 2330
315 Ga0500622_0046485 3300053156 Bacteria 2244
316 Ga0500637_0041540 3300053178 Bacteria 2599
317 Ga0500637_0174154 3300053178 Bacteria 1235
318 Ga0500645_001154 3300053730 Bacteria 14234
319 Ga0500645_001246 3300053730 Bacteria 13426
320 Ga0500645_009530 3300053730 Bacteria 3258
321 Ga0500645_028927 3300053730 Bacteria 1675
322 Ga0500609_000366 3300053731 Bacteria 6725
323 Ga0500596_000808 3300053735 Bacteria 6185
324 Ga0466962_0002757 3300061719 Bacteria 8344
325 2511122335 2510917020 Bacteria 5657507
326 2585145824 2582581279 Bacteria 4980720
327 2585154754 2582581280 Bacteria 5994497
328 2585198270 2582581293 Bacteria 5907401
329 2643750751 2643221545 Bacteria 5083237
330 2643925580 2643221583 Bacteria 5218014
331 2644343237 2643221661 Bacteria 4267604
332 2644366537 2643221666 Bacteria 4265935
333 2644509825 2643221691 Bacteria 5093099
334 2739790434 2739367756 Bacteria 4553612
335 2819537894 2818991435 Bacteria 5433759
336 2819648677 2818991454 Bacteria 5563326
337 2843748416 2843744320 Bacteria 5659202
338 2849564680 2849560528 Bacteria 5393480
339 2849576545 2849573788 Bacteria 5421256
340 2851155070 2851153111 Bacteria 5542585
341 2857509410 2857504554 Bacteria 5369913
342 2898330028 2898329390 Bacteria 5168154
343 2928532447 2928531327 Bacteria 5101314
344 Ga0070678_100028290
345 JGI25153J46596_10018089
346 JGI25153J46596_10022800
347 rootH2_10059183
348 rootL2_10007973
349 rootH1_10063031
350 rootH1_10078753
351 Ga0055530_10000325
352 Ga0055531_10002001
353 Ga0055531_10002894
354 Ga0055531_10037067
355 Ga0065165_1000327
356 Ga0065165_1001153
357 Ga0070658_10049293
358 Ga0070680_100012545
359 Ga0070660_100109227
360 Ga0070691_10003775
361 Ga0070668_100000162
362 Ga0070668_100002433
363 Ga0070668_100003126
364 Ga0070668_100005775
365 Ga0070668_100032406
366 Ga0070669_100028022
367 Ga0070669_100040370
368 Ga0070671_100213306
369 Ga0070671_100339650
370 Ga0070659_100002252
371 Ga0070659_100013191
372 Ga0070667_100000206
373 Ga0070667_100002825
374 Ga0070667_100013969
375 Ga0070662_100250353
376 Ga0070681_10023690
377 Ga0070681_10038139
378 Ga0070681_10062055
379 Ga0070679_100025384
380 Ga0070679_100238299
381 Ga0068853_100009173
382 Ga0068853_100080734
383 Ga0068853_100235309
384 Ga0070665_100000353
385 Ga0070665_100001636
386 Ga0070665_100004050
387 Ga0070665_100044844
388 Ga0070665_100101450
389 Ga0068855_100012297
390 Ga0068855_100104488
391 Ga0068859_100000075
392 Ga0068859_100022617
393 Ga0068859_100032448
394 Ga0068864_100000167
395 Ga0068864_100014536
396 Ga0068861_100054785
397 Ga0068861_100167294
398 Ga0068863_100004050
399 Ga0068863_100007182
400 Ga0068863_100033574
401 Ga0068858_100002500
402 Ga0068858_100009819
403 Ga0068860_100000423
404 Ga0068860_100014420
405 Ga0068862_100005034
406 Ga0068862_100007971
407 Ga0068862_100009436
408 Ga0068862_100087393
409 Ga0075365_10192507
410 Ga0075363_100031732
411 Ga0068865_100030796
412 Ga0097620_100000075
413 Ga0097620_100022617
414 Ga0097620_100032448
415 Ga0105240_10002463
416 Ga0105240_10141597
417 Ga0105240_10231248
418 Ga0105240_10238955
419 Ga0105248_10001123
420 Ga0105248_10021096
421 Ga0105248_10051475
422 Ga0105237_10363876
423 Ga0105238_10100856
424 Ga0105249_10044033
425 Ga0157373_10002157
426 Ga0157369_10079362
427 Ga0163162_10027209
428 Ga0163162_10084954
429 Ga0157372_10063914
430 Ga0157375_10327320
431 Ga0163163_10015639
432 Ga0163163_10069406
433 Ga0157380_10143009
434 Ga0157379_10000104
435 Ga0157379_10015427
436 Ga0157379_10119558
437 Ga0183365_10001
438 Ga0213875_10042433
439 Ga0209676_1000099
440 Ga0209676_1000180
441 Ga0209564_1005511
442 Ga0209758_1002918
443 Ga0209758_1004483
444 Ga0209050_1000038
445 Ga0209050_1000319
446 Ga0209050_1022996
447 Ga0209256_1024010
448 Ga0209051_1001724
449 Ga0209257_1000408
450 Ga0209257_1001267
451 Ga0209257_1003216
452 Ga0207705_10005904
453 Ga0207707_10169662
454 Ga0207707_10196491
455 Ga0207695_10004247
456 Ga0207695_10004557
457 Ga0207695_10008534
458 Ga0207695_10054938
459 Ga0207695_10086605
460 Ga0207671_10130183
461 Ga0207660_10013911
462 Ga0207660_10080785
463 Ga0207657_10005646
464 Ga0207652_10003052
465 Ga0207681_10025693
466 Ga0207694_10144818
467 Ga0207650_10000031
468 Ga0207644_10027849
469 Ga0207690_10010089
470 Ga0207704_10026376
471 Ga0207711_10014100
472 Ga0207689_10014452
473 Ga0207679_10010887
474 Ga0207667_10009040
475 Ga0207667_10044856
476 Ga0207667_10132605
477 Ga0207712_10025767
478 Ga0207668_10000018
479 Ga0207668_10000409
480 Ga0207668_10001774
481 Ga0207668_10012614
482 Ga0207658_10001371
483 Ga0207677_10111275
484 Ga0207703_10006774
485 Ga0207703_10104906
486 Ga0207639_10057510
487 Ga0207639_10241203
488 Ga0207702_10022409
489 Ga0207702_10029381
490 Ga0207641_10000954
491 Ga0207641_10018473
492 Ga0207641_10174037
493 Ga0207641_10413605
494 Ga0207676_10000189
495 Ga0207676_10011745
496 Ga0207675_100210763
497 Ga0209981_1000291
498 Ga0210000_1004528
499 Ga0209999_1017891
500 Ga0209983_1017724
501 Ga0268266_10000062
502 Ga0268266_10001993
503 Ga0268266_10008159
504 Ga0268266_10033841
505 Ga0268266_10113870
506 Ga0268265_10001469
507 Ga0268265_10011582
508 Ga0268265_10046998
509 Ga0268265_10066584
510 Ga0268265_10125997
511 Ga0268264_10000361
512 Ga0268264_10007822
513 Ga0307517_10021518
514 Ga0307517_10040637
515 Ga0307517_10071259
516 Ga0265338_10096881
517 Ga0265338_10135174
518 Ga0307511_10097791
519 Ga0265327_10000708
520 Ga0265327_10000946
521 Ga0307513_10007827
522 Ga0307513_10085695
523 Ga0307413_10017954
524 Ga0307409_100063677
525 Ga0307411_10086387
526 Ga0395899_0000311
527 Ga0395900_0000004
528 Ga0395900_0029268
529 Ga0395898_0011695
530 Ga0395905_0000234
531 Ga0395905_0314868
532 Ga0395905_0470918
533 Ga0436364_1178475
534 Ga0395901_0000005
535 Ga0436365_0215846
536 Ga0439446_0009224
537 Ga0466969_0000771
538 Ga0466966_0001130
539 Ga0466961_0062015
540 Ga0466971_0020150
541 Ga0466971_0081339
542 Ga0466957_0022971
543 Ga0466959_0004557
544 Ga0466958_0018308
545 Ga0495627_001187
546 Ga0495638_0000612
547 Ga0495638_0000764
548 Ga0495638_0051424
549 Ga0495650_0000020
550 Ga0495594_0152589
551 Ga0495583_0000069
552 Ga0495606_0003363
553 Ga0495610_0000092
554 Ga0495610_0004031
555 Ga0495610_0032570
556 Ga0495616_0000210
557 Ga0495620_0011367
558 Ga0495620_0054233
559 Ga0495631_0019899
560 Ga0495632_0015067
561 Ga0495637_0036846
562 Ga0495643_0016755
563 Ga0495648_0000399
564 Ga0495648_0042955
565 Ga0495663_0030682
566 Ga0495642_0057131
567 Ga0495654_0000010
568 Ga0495654_0062923
569 Ga0495622_0001464
570 Ga0495668_0007611
571 Ga0495668_0009746
572 Ga0495668_0097925
573 Ga0495668_0125297
574 Ga0495625_0000295
575 Ga0495625_0071448
576 Ga0495669_0000004
577 Ga0495669_0000273
578 Ga0495672_0003946
579 Ga0495683_0026596
580 Ga0495677_0007886
581 Ga0495673_0000403
582 Ga0495681_0047849
583 Ga0495686_0000765
584 Ga0495686_0001833
585 Ga0495686_0007282
586 Ga0495686_0017141
587 Ga0495593_0057302
588 Ga0496101_0075519
589 Ga0496102_0028467
590 Ga0496102_0105064
591 Ga0496107_0000037
592 Ga0496107_0021397
593 Ga0496109_0074842
594 Ga0496112_0108584
595 Ga0496115_0076111
596 Ga0496121_0005027
597 Ga0496124_0011339
598 Ga0496126_0008930
599 Ga0495678_002284
600 Ga0495682_0052641
601 Ga0501033_0203958
602 Ga0501033_0219089
603 Ga0501034_0278671
604 Ga0501034_0296523
605 Ga0501037_0208830
606 Ga0501047_0000478
607 Ga0501047_0035901
608 Ga0501047_0272348
609 Ga0501257_023454
610 Ga0501083_0225119
611 Ga0501035_0007513
612 Ga0501035_0221501
613 Ga0501044_0003994
614 Ga0501044_0011249
615 Ga0501044_0369926
616 nmdc:mga03n38_61616_c1
617 nmdc:mga03n38_73199_c1
618 nmdc:mga06z11_4063_c1
619 nmdc:mga04h51_1772_c1
620 nmdc:mga07m45_10519_c1
621 nmdc:mga0sz30_2139_c1
622 Ga0500635_0000020
623 Ga0500635_0004186
624 Ga0500578_0000080
625 Ga0500643_002438
626 Ga0500643_010302
627 Ga0500644_0000218
628 Ga0500583_0046312
629 Ga0500566_0025996
630 Ga0500641_0006538
631 Ga0500641_0046589
632 Ga0500641_0049858
633 Ga0500556_0001075
634 Ga0500556_0015367
635 Ga0500556_0018258
636 Ga0500562_008647
637 Ga0500594_0000590
638 Ga0500595_015913
639 Ga0500595_021904
640 Ga0500607_042836
641 Ga0500608_000062
642 Ga0500608_000253
643 Ga0500608_015309
644 Ga0500614_001347
645 Ga0500618_000533
646 Ga0500559_0002072
647 Ga0500559_0044394
648 Ga0500559_0047033
649 Ga0500564_000127
650 Ga0500577_0002029
651 Ga0500590_021671
652 Ga0500616_0024627
653 Ga0500619_060261
654 Ga0500620_069365
655 Ga0500622_0000812
656 Ga0500622_0007466
657 Ga0500622_0043469
658 Ga0500622_0046485
659 Ga0500637_0041540
660 Ga0500637_0174154
661 Ga0500645_001154
662 Ga0500645_001246
663 Ga0500645_009530
664 Ga0500645_028927
665 Ga0500609_000366
666 Ga0500596_000808
667 Ga0466962_0002757
668 2511122335
669 2585145824
670 2585154754
671 2585198270
672 2643750751
673 2643925580
674 2644343237
675 2644366537
676 2644509825
677 2739790434
678 2819537894
679 2819648677
680 2843748416
681 2849564680
682 2849576545
683 2851155070
684 2857509410
685 2898330028
686 2928532447

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13525

YfiO

Outer membrane lipoprotein

67

267

0.97

PF13174

TPR_6

Tetratricopeptide repeat

109

141

0.95

PF13432

TPR_16

Tetratricopeptide repeat

208

274

0.92

PF13512

TPR_18

Tetratricopeptide repeat

65

196

0.92

PF13432

TPR_16

Tetratricopeptide repeat

75

142

0.91

PF13432

TPR_16

Tetratricopeptide repeat

112

184

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2xev-assembly1.cif.gz_A crystal structure of the tpr domain of xanthomonas campestris ybgf 0.8923 36 161
4cgq-assembly1.cif.gz_A full length tah1 bound to hsp90 peptide srmeevd 0.8885 33 104
7b1u-assembly1.cif.gz_A crystal structure of a shortened ipgc variant in complex with 3-(3,4-difluorophenyl)-1h,4h,6h,7h-imidazo[2,1-c][1,2,4]triazine 0.8705 33 161
7ayw-assembly1.cif.gz_A crystal structure of a shortened ipgc variant in complex with 2h-isoindol-1-amine 0.8695 33 159
2xev-assembly1.cif.gz_A crystal structure of the tpr domain of xanthomonas campestris ybgf 0.8649 36 161
ID Description Score Start End Superfamily
2xevB00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8941 36 161 1.25.40.10
2xevA00 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8923 36 161 1.25.40.10
af_A0A0R4IV14_290_391_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8882 33 117 1.25.40.10
af_P45955_142_263_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8692 34 159 1.25.40.10
af_A4HXP1_1_128_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.8683 33 165 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A1V6HWN3-F1-model_v4 Outer membrane biogenesis protein BamD 0.9556 162 245
AF-A0A6L4ZS91-F1-model_v4 Uncharacterized protein 0.946 162 248
AF-A0A1V5T2S5-F1-model_v4 Tol-pal system protein YbgF 0.9456 33 168 GO:0051301
AF-A0A7C2WZM3-F1-model_v4 Outer membrane protein assembly factor BamD 0.9435 27 111 GO:0009279
AF-A0A399FYA3-F1-model_v4 Outer membrane protein assembly factor BamD 0.9273 33 218 GO:0009279

Map