F415485

General Info

Members Datasets Scaffolds Average Seq Length
343 207 686 399

Family's Representative Sequence

Representative Sequence 3300005539|Ga0068853_100019604|Ga0068853_1000196046
Length 418
Sequence MGSFFCYFYFLSIPESGFMLQNKKIVLGVCGSIAAYKSASLVRLLIKAGAEVQVVMTPDATGFITPLTLSTLSKRPVLVEYSNTETGEWNNHVELGLWADLMLIAPVSANTLAKMANGQSDNLLTAVYLSAKCPVYFAPAMDLDMWKHPATQQNIQELKGYGNIMIPPGSGELASGLYGEGRMAEPEEIVSFLEADIKKKLPLVNQTILVTAGPTHEAIDPVRFIGNHSSGKMGFAIADQFAAMGADVILVTGPTSQTSQQRGIKRVDVTSAADMLEACLKYYKDAKACIMSAAVADFTPVNVSAQKIKKQDKDLNIELKKTTDILKTLGEQKRKGQILVGFALETNDEEKNAIDKLQRKNLDFIVLNSLNDEGAGFKTDTNKITIIDNKLQKTTFELKDKNEVAKDICNKVAELIKA

Samples

Sample ID Description Type Environment
1 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
7 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
8 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
9 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
10 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
62 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
63 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
66 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
100 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
101 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
102 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
103 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
104 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
115 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
118 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
119 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
122 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
123 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
124 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
125 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
126 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
129 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
132 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
133 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
134 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
135 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
136 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
137 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
138 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
139 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
146 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
147 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
148 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
161 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
162 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
163 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
164 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
165 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
166 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
167 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
168 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
169 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
170 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
171 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
172 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
173 2738541283 Pedobacter sp. OK701 Isolate Unclassified
174 2738541284 Pedobacter sp. YR016 Isolate Unclassified
175 2738541302 Pedobacter sp. CF074 Isolate Unclassified
176 2738543023 Pedobacter sp. OK628 Isolate Unclassified
177 2739367651 Pedobacter sp. OK291 Isolate Unclassified
178 2739367656 Pedobacter sp. CF523 Isolate Unclassified
179 2739367663 Pedobacter sp. YR510 Isolate Unclassified
180 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
181 2818991437 Pedobacter terrae 518 Isolate Unclassified
182 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
183 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
184 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
185 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
186 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
187 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
188 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
189 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
190 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
191 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
192 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
193 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
194 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
195 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
196 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
197 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
198 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
199 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
200 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
201 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
202 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
203 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
204 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere
205 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
206 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
207 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.34
Metatranscriptomes 0
Isolates 11.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.33
Nodule 0
Rhizoplane 0.29
Rhizosphere 78.13
Stem 0
Stem Tuber 0
Unclassified 0.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068853_100019604 3300005539 Bacteria 5612
2 SwRhRL2b_contig_3708228 2162886007 Bacteria 9199
3 SwRhRL2b_contig_595132 2162886007 Bacteria 2791
4 JGI24739J22299_10005772 3300001989 Bacteria 4691
5 JGI24737J22298_10005464 3300001990 Bacteria 4388
6 JGI24735J21928_10005064 3300002067 Bacteria 4386
7 JGI25162J39368_1000920 3300002737 Bacteria 18880
8 JGI25157J39369_1003254 3300002741 Bacteria 3407
9 JGI25152J39213_1000292 3300002773 Bacteria 32967
10 JGI25150J39212_1000014 3300002774 Bacteria 170955
11 JGI25151J46595_10000042 3300003187 Bacteria 170955
12 JGI25153J46596_10000009 3300003215 Bacteria 340925
13 rootH1_10007082 3300003316 Bacteria 16048
14 rootH1_10008539 3300003316 Bacteria 51656
15 rootH2_10017927 3300003320 Bacteria 14805
16 rootH2_10045775 3300003320 Bacteria 12097
17 rootH2_10139880 3300003320 Bacteria 9868
18 rootL2_10040270 3300003322 Bacteria 21232
19 rootH1_10028261 3300003323 Bacteria 6287
20 rootH1_10028262 3300003323 Bacteria 1979
21 Ga0055536_1000019 3300003781 Bacteria 203087
22 Ga0055536_1002253 3300003781 Bacteria 10976
23 Ga0065165_1000085 3300005262 Bacteria 154355
24 Ga0065165_1002588 3300005262 Bacteria 14878
25 Ga0065714_10002458 3300005288 Bacteria 16930
26 Ga0065714_10003164 3300005288 Bacteria 15644
27 Ga0065714_10064787 3300005288 Bacteria 18802
28 Ga0065714_10064811 3300005288 Bacteria 18118
29 Ga0065714_10069650 3300005288 Bacteria 4135
30 Ga0065714_10072018 3300005288 Bacteria 3448
31 Ga0065704_10000462 3300005289 Bacteria 23509
32 Ga0065704_10003272 3300005289 Bacteria 6205
33 Ga0065704_10071284 3300005289 Bacteria 12008
34 Ga0065704_10079425 3300005289 Bacteria 4166
35 Ga0065704_10143622 3300005289 Bacteria 1493
36 Ga0070658_10003725 3300005327 Bacteria 12472
37 Ga0070658_10017399 3300005327 Bacteria 5752
38 Ga0070680_100039207 3300005336 Bacteria 3834
39 Ga0070682_100019998 3300005337 Bacteria 3934
40 Ga0070660_100020619 3300005339 Bacteria 4848
41 Ga0070671_100019935 3300005355 Bacteria 5463
42 Ga0070674_100096103 3300005356 Bacteria 2149
43 Ga0070673_100061735 3300005364 Bacteria 2974
44 Ga0070659_100004359 3300005366 Bacteria 10103
45 Ga0070663_100003942 3300005455 Bacteria 8653
46 Ga0070662_100002801 3300005457 Bacteria 10797
47 Ga0070681_10028638 3300005458 Bacteria 5601
48 Ga0068867_100001542 3300005459 Bacteria 15998
49 Ga0070665_100000367 3300005548 Bacteria 67579
50 Ga0068855_100000260 3300005563 Bacteria 65935
51 Ga0068855_100003876 3300005563 Bacteria 18281
52 Ga0068855_100006385 3300005563 Bacteria 14368
53 Ga0068855_100049072 3300005563 Bacteria 4979
54 Ga0068856_100001596 3300005614 Bacteria 23687
55 Ga0068856_100044047 3300005614 Bacteria 4391
56 Ga0068856_100059149 3300005614 Bacteria 3785
57 Ga0068852_100004305 3300005616 Bacteria 10050
58 Ga0068858_100147363 3300005842 Bacteria 2211
59 Ga0075366_10000298 3300006195 Bacteria 22373
60 Ga0075366_10009961 3300006195 Bacteria 5324
61 Ga0075366_10025782 3300006195 Bacteria 3438
62 Ga0097621_100000478 3300006237 Bacteria 28105
63 Ga0068871_100000353 3300006358 Bacteria 31920
64 Ga0068865_100008552 3300006881 Bacteria 6327
65 Ga0105244_10000004 3300009036 Bacteria 492478
66 Ga0105240_10003518 3300009093 Bacteria 24307
67 Ga0105240_10021963 3300009093 Bacteria 8477
68 Ga0105240_10094227 3300009093 Bacteria 3653
69 Ga0105240_10130782 3300009093 Bacteria 3011
70 Ga0105240_10166917 3300009093 Bacteria 2610
71 Ga0105243_10000003 3300009148 Bacteria 712931
72 Ga0105241_10027907 3300009174 Bacteria 4203
73 Ga0105241_10040503 3300009174 Bacteria 3518
74 Ga0105242_10020053 3300009176 Bacteria 5240
75 Ga0105237_10003989 3300009545 Bacteria 17254
76 Ga0105237_10004657 3300009545 Bacteria 15795
77 Ga0105237_10081840 3300009545 Bacteria 3219
78 Ga0105237_10097145 3300009545 Bacteria 2936
79 Ga0105237_10219336 3300009545 Bacteria 1902
80 Ga0105238_10024064 3300009551 Bacteria 6209
81 Ga0105239_10000142 3300010375 Bacteria 101628
82 Ga0105239_10001670 3300010375 Bacteria 29256
83 Ga0105239_10005011 3300010375 Bacteria 15636
84 Ga0105239_10024022 3300010375 Bacteria 6714
85 Ga0105239_10026268 3300010375 Bacteria 6409
86 Ga0105239_10061658 3300010375 Bacteria 4116
87 Ga0105239_10115316 3300010375 Bacteria 2980
88 Ga0157373_10002718 3300013100 Bacteria 13404
89 Ga0157373_10005238 3300013100 Bacteria 9734
90 Ga0157373_10008188 3300013100 Bacteria 7775
91 Ga0157373_10121603 3300013100 Bacteria 1835
92 Ga0157371_10001108 3300013102 Bacteria 29201
93 Ga0157371_10003740 3300013102 Bacteria 13624
94 Ga0157371_10004282 3300013102 Bacteria 12519
95 Ga0157371_10009245 3300013102 Bacteria 7775
96 Ga0157371_10078995 3300013102 Bacteria 2331
97 Ga0157370_10000935 3300013104 Bacteria 37047
98 Ga0157370_10012943 3300013104 Bacteria 8624
99 Ga0157370_10017284 3300013104 Bacteria 7280
100 Ga0157370_10017666 3300013104 Bacteria 7190
101 Ga0157370_10039142 3300013104 Bacteria 4582
102 Ga0157370_10122311 3300013104 Bacteria 2430
103 Ga0157370_10164258 3300013104 Bacteria 2065
104 Ga0157369_10000897 3300013105 Bacteria 37997
105 Ga0157369_10001172 3300013105 Bacteria 32699
106 Ga0157369_10022312 3300013105 Bacteria 7066
107 Ga0157369_10083865 3300013105 Bacteria 3407
108 Ga0157374_10006879 3300013296 Bacteria 9676
109 Ga0157374_10025859 3300013296 Bacteria 5277
110 Ga0157378_10023105 3300013297 Bacteria 5472
111 Ga0157378_10035567 3300013297 Bacteria 4406
112 Ga0163162_10001116 3300013306 Bacteria 24936
113 Ga0163162_10001647 3300013306 Bacteria 20926
114 Ga0163162_10058725 3300013306 Bacteria 3877
115 Ga0157372_10000042 3300013307 Bacteria 157651
116 Ga0157372_10017148 3300013307 Bacteria 7775
117 Ga0157372_10028252 3300013307 Bacteria 6121
118 Ga0157372_10048299 3300013307 Bacteria 4731
119 Ga0157372_10089409 3300013307 Bacteria 3499
120 Ga0157375_10034487 3300013308 Bacteria 4822
121 Ga0157375_10110525 3300013308 Bacteria 2846
122 Ga0157375_10182546 3300013308 Bacteria 2250
123 Ga0157375_10188122 3300013308 Bacteria 2219
124 Ga0163163_10043434 3300014325 Bacteria 4407
125 Ga0182008_10000024 3300014497 Bacteria 199978
126 Ga0182008_10001650 3300014497 Bacteria 14745
127 Ga0182008_10001930 3300014497 Bacteria 13389
128 Ga0182008_10036491 3300014497 Bacteria 2460
129 Ga0157376_10013868 3300014969 Bacteria 6024
130 Ga0182006_1000853 3300015261 Bacteria 20516
131 Ga0182006_1001310 3300015261 Bacteria 15282
132 Ga0182006_1001788 3300015261 Bacteria 12413
133 Ga0182006_1012671 3300015261 Bacteria 3683
134 Ga0182007_10000002 3300015262 Bacteria 564661
135 Ga0183373_1004 3300015682 Bacteria 537398
136 Ga0163161_10002656 3300017792 Bacteria 12702
137 Ga0163161_10012218 3300017792 Bacteria 5956
138 Ga0163161_10031005 3300017792 Bacteria 3808
139 Ga0163161_10053122 3300017792 Bacteria 2938
140 Ga0163161_10082056 3300017792 Bacteria 2375
141 Ga0209437_100666 3300025233 Bacteria 18932
142 Ga0207425_1000023 3300025245 Bacteria 341339
143 Ga0209026_1001689 3300025250 Bacteria 9255
144 Ga0209026_1002272 3300025250 Bacteria 7350
145 Ga0209129_1000032 3300025258 Bacteria 341150
146 Ga0209233_1001157 3300025261 Bacteria 10711
147 Ga0209676_1000009 3300025292 Bacteria 981719
148 Ga0209676_1001689 3300025292 Bacteria 19129
149 Ga0209025_1000047 3300025294 Bacteria 341150
150 Ga0209758_1000145 3300025297 Bacteria 170553
151 Ga0209050_1000094 3300025298 Bacteria 242893
152 Ga0207655_1000008 3300025728 Bacteria 734289
153 Ga0207647_10002986 3300025904 Bacteria 12736
154 Ga0207647_10013640 3300025904 Bacteria 5627
155 Ga0207647_10096901 3300025904 Bacteria 1755
156 Ga0207645_10001062 3300025907 Bacteria 22737
157 Ga0207705_10003190 3300025909 Bacteria 12486
158 Ga0207654_10008033 3300025911 Bacteria 5317
159 Ga0207707_10052049 3300025912 Bacteria 3566
160 Ga0207695_10002206 3300025913 Bacteria 29287
161 Ga0207695_10025674 3300025913 Bacteria 6590
162 Ga0207695_10049855 3300025913 Bacteria 4408
163 Ga0207695_10093040 3300025913 Bacteria 3024
164 Ga0207671_10001555 3300025914 Bacteria 26264
165 Ga0207671_10026095 3300025914 Bacteria 4382
166 Ga0207671_10032736 3300025914 Bacteria 3867
167 Ga0207660_10016871 3300025917 Bacteria 4843
168 Ga0207657_10054398 3300025919 Bacteria 3461
169 Ga0207644_10001516 3300025931 Bacteria 14983
170 Ga0207690_10002695 3300025932 Bacteria 10714
171 Ga0207706_10003974 3300025933 Bacteria 14009
172 Ga0207706_10041236 3300025933 Bacteria 4093
173 Ga0207709_10000008 3300025935 Bacteria 713099
174 Ga0207669_10047974 3300025937 Bacteria 2534
175 Ga0207704_10001260 3300025938 Bacteria 11314
176 Ga0207667_10000039 3300025949 Bacteria 278843
177 Ga0207667_10004116 3300025949 Bacteria 17872
178 Ga0207667_10019965 3300025949 Bacteria 7466
179 Ga0207667_10022684 3300025949 Bacteria 6925
180 Ga0207651_10073439 3300025960 Bacteria 2432
181 Ga0207640_10022862 3300025981 Bacteria 3749
182 Ga0207639_10017232 3300026041 Bacteria 5121
183 Ga0207678_10018368 3300026067 Bacteria 6141
184 Ga0207702_10010761 3300026078 Bacteria 7636
185 Ga0207702_10148338 3300026078 Bacteria 2131
186 Ga0207648_10001664 3300026089 Bacteria 24356
187 Ga0207683_10004981 3300026121 Bacteria 11418
188 Ga0268266_10000053 3300028379 Bacteria 295181
189 Ga0307517_10000515 3300028786 Bacteria 66157
190 Ga0307515_10000007 3300028794 Bacteria 719669
191 Ga0307515_10001900 3300028794 Bacteria 46488
192 Ga0307515_10009214 3300028794 Bacteria 19120
193 Ga0316177_1154660 3300030731 Bacteria 17690
194 Ga0316176_1021059 3300030732 Bacteria 14205
195 Ga0316183_1140892 3300030742 Bacteria 51494
196 Ga0316182_1426954 3300030745 Bacteria 2871
197 Ga0265327_10027920 3300031251 Bacteria 3240
198 Ga0265327_10097385 3300031251 Bacteria 1425
199 Ga0307509_10017333 3300031507 Bacteria 8294
200 Ga0307408_100001533 3300031548 Bacteria 17158
201 Ga0307408_100001621 3300031548 Bacteria 16636
202 Ga0307408_100004100 3300031548 Bacteria 9941
203 Ga0307405_10000002 3300031731 Bacteria 575196
204 Ga0307405_10000015 3300031731 Bacteria 206299
205 Ga0307405_10023626 3300031731 Bacteria 3497
206 Ga0307407_10000054 3300031903 Bacteria 49850
207 Ga0307412_10000030 3300031911 Bacteria 208541
208 Ga0307412_10001684 3300031911 Bacteria 12221
209 Ga0307412_10152273 3300031911 Bacteria 1708
210 Ga0307416_100000755 3300032002 Bacteria 16928
211 Ga0307414_10003205 3300032004 Bacteria 8702
212 Ga0307414_10007995 3300032004 Bacteria 5977
213 Ga0307414_10009568 3300032004 Bacteria 5577
214 Ga0307414_10017000 3300032004 Bacteria 4441
215 Ga0307414_10027878 3300032004 Bacteria 3655
216 Ga0307414_10045637 3300032004 Bacteria 3002
217 Ga0307510_10050434 3300033180 Bacteria 4415
218 Ga0395899_0000011 3300037312 Bacteria 521331
219 Ga0395899_0000238 3300037312 Bacteria 74240
220 Ga0395899_0000965 3300037312 Bacteria 26677
221 Ga0395900_0000647 3300037418 Bacteria 46625
222 Ga0395900_0007624 3300037418 Bacteria 11175
223 Ga0395900_0011798 3300037418 Bacteria 8935
224 Ga0395900_0110795 3300037418 Unclassified 2820
225 Ga0395900_0347312 3300037418 Bacteria 1458
226 Ga0395905_0001592 3300037471 Bacteria 27004
227 Ga0395905_0010825 3300037471 Bacteria 8836
228 Ga0395901_0001306 3300038443 Bacteria 26264
229 Ga0395901_0002487 3300038443 Bacteria 18676
230 Ga0395901_0368907 3300038443 Bacteria 1479
231 Ga0436361_0440542 3300039447 Bacteria 7876
232 Ga0439457_023083 3300042014 Bacteria 1377
233 Ga0451577_0002268 3300042876 Bacteria 23273
234 Ga0466966_0013924 3300044684 Bacteria 5324
235 Ga0453684_0004833 3300044712 Bacteria 27664
236 Ga0451576_0000012 3300045051 Bacteria 674684
237 Ga0495627_003436 3300046453 Bacteria 7000
238 Ga0495627_024407 3300046453 Bacteria 1971
239 Ga0495629_0067139 3300046459 Bacteria 2503
240 Ga0495650_0000144 3300046471 Bacteria 165957
241 Ga0495650_0029340 3300046471 Bacteria 2509
242 Ga0495585_0000880 3300046492 Bacteria 25539
243 Ga0495585_0001555 3300046492 Bacteria 17794
244 Ga0495607_0037506 3300046501 Bacteria 2911
245 Ga0495583_0026725 3300046506 Bacteria 2856
246 Ga0495606_0000926 3300046507 Bacteria 43259
247 Ga0495606_0020909 3300046507 Bacteria 4807
248 Ga0495606_0025417 3300046507 Bacteria 4241
249 Ga0495606_0091661 3300046507 Bacteria 1868
250 Ga0495606_0112933 3300046507 Bacteria 1636
251 Ga0495610_0000197 3300046512 Bacteria 67429
252 Ga0495610_0000974 3300046512 Bacteria 26457
253 Ga0495610_0003577 3300046512 Bacteria 12008
254 Ga0495616_0002914 3300046513 Bacteria 11153
255 Ga0495616_0003890 3300046513 Bacteria 9514
256 Ga0495628_0185976 3300046516 Bacteria 1570
257 Ga0495637_0014865 3300046520 Bacteria 3667
258 Ga0495637_0020849 3300046520 Bacteria 3009
259 Ga0495644_0004642 3300046523 Bacteria 5396
260 Ga0495652_0051543 3300046529 Bacteria 3514
261 Ga0495652_0171576 3300046529 Bacteria 1674
262 Ga0495609_0004581 3300046538 Bacteria 7509
263 Ga0495633_0000157 3300046558 Bacteria 89236
264 Ga0495633_0002133 3300046558 Bacteria 14171
265 Ga0495668_0000122 3300046616 Bacteria 115217
266 Ga0495625_0000059 3300046660 Bacteria 180330
267 Ga0495625_0000548 3300046660 Bacteria 55064
268 Ga0495625_0031659 3300046660 Bacteria 3931
269 Ga0495661_0009992 3300046665 Bacteria 6487
270 Ga0495661_0015674 3300046665 Bacteria 5052
271 Ga0495658_0017411 3300046683 Bacteria 3712
272 Ga0495649_0000031 3300046694 Bacteria 151547
273 Ga0495649_0024229 3300046694 Bacteria 3385
274 Ga0495660_0008136 3300046810 Bacteria 6157
275 Ga0495660_0046595 3300046810 Bacteria 2377
276 Ga0495683_0102019 3300047323 Bacteria 1378
277 Ga0495687_001478 3300047443 Bacteria 21499
278 Ga0495687_004531 3300047443 Bacteria 9330
279 Ga0495677_0016819 3300047445 Bacteria 2652
280 Ga0495673_0028148 3300047469 Bacteria 2665
281 Ga0495686_0001365 3300047472 Bacteria 27228
282 Ga0495614_0025252 3300048089 Bacteria 2562
283 Ga0496116_0015078 3300048919 Bacteria 6126
284 Ga0496117_0002754 3300048920 Bacteria 21547
285 Ga0496122_0001975 3300048925 Bacteria 30642
286 Ga0496122_0024040 3300048925 Bacteria 5344
287 Ga0496123_0011770 3300048926 Bacteria 7536
288 Ga0496123_0028553 3300048926 Bacteria 4126
289 Ga0496124_0028154 3300048927 Bacteria 5030
290 Ga0496125_0049477 3300048928 Bacteria 3493
291 Ga0501047_0081101 3300049581 Bacteria 3119
292 Ga0501249_000003 3300049679 Bacteria 242930
293 nmdc:mga0k408_17171_c1 3300050493 Bacteria 4028
294 nmdc:mga0k408_510_c1 3300050493 Bacteria 21353
295 nmdc:mga0k408_9210_c1 3300050493 Bacteria 5318
296 Ga0500635_0000336 3300053080 Bacteria 15970
297 Ga0500651_0000512 3300053093 Bacteria 19989
298 Ga0500641_0004086 3300053096 Bacteria 5152
299 Ga0500594_0017538 3300053118 Bacteria 1754
300 Ga0500608_004145 3300053122 Bacteria 5562
301 Ga0500618_001574 3300053125 Bacteria 9939
302 Ga0500624_000440 3300053157 Bacteria 12581
303 Ga0500584_004969 3300053726 Bacteria 5534
304 2513234452 2513020052 Bacteria 5120511
305 2522550321 2522125168 Bacteria 7376607
306 2586210680 2585427687 Bacteria 5544917
307 2599479514 2599185184 Bacteria 6430550
308 2722731145 2721755487 Bacteria 6357185
309 2738755248 2738541283 Bacteria 7222293
310 2738764353 2738541284 Bacteria 5199923
311 2738856826 2738541302 Bacteria 5944758
312 2739305083 2738543023 Bacteria 6767879
313 2739588356 2739367651 Bacteria 6359826
314 2739613882 2739367656 Bacteria 5152243
315 2739648621 2739367663 Bacteria 5040914
316 2776614931 2775506987 Bacteria 5373360
317 2819550397 2818991437 Bacteria 5805520
318 2833644237 2833640130 Bacteria 4858325
319 2842723844 2842722452 Bacteria 6263924
320 2842908261 2842903701 Bacteria 6986368
321 2842912424 2842909656 Bacteria 6185908
322 2849282847 2849281842 Bacteria 6065644
323 2852632052 2852627209 Bacteria 5896285
324 2857629225 2857627736 Bacteria 5625397
325 2881248459 2881247448 Bacteria 3717788
326 2890740191 2890737413 Bacteria 4269751
327 2896347148 2896344016 Bacteria 3811746
328 2898713917 2898713307 Bacteria 4110805
329 2904449862 2904445276 Bacteria 5310396
330 2904785788 2904780799 Bacteria 5840761
331 2919182446 2919177583 Bacteria 5641607
332 2919190157 2919186247 Bacteria 6244071
333 2919440605 2919437846 Bacteria 6199444
334 2928083937 2928078545 Bacteria 6534839
335 2928152378 2928147474 Bacteria 6512076
336 2932087743 2932082852 Bacteria 6563563
337 2939668438 2939664404 Bacteria 6364494
338 2945999394 2945997725 Bacteria 6404843
339 2954021805 2954016120 Bacteria 6446024
340 2958512595 2958512119 Bacteria 4528530
341 2965323435 2965320100 Bacteria 3975600
342 2977234311 2977232053 Bacteria 5485925
343 3003237242 3003233435 Bacteria 4458031
344 Ga0068853_100019604
345 SwRhRL2b_contig_3708228
346 SwRhRL2b_contig_595132
347 JGI24739J22299_10005772
348 JGI24737J22298_10005464
349 JGI24735J21928_10005064
350 JGI25162J39368_1000920
351 JGI25157J39369_1003254
352 JGI25152J39213_1000292
353 JGI25150J39212_1000014
354 JGI25151J46595_10000042
355 JGI25153J46596_10000009
356 rootH1_10007082
357 rootH1_10008539
358 rootH2_10017927
359 rootH2_10045775
360 rootH2_10139880
361 rootL2_10040270
362 rootH1_10028261
363 rootH1_10028262
364 Ga0055536_1000019
365 Ga0055536_1002253
366 Ga0065165_1000085
367 Ga0065165_1002588
368 Ga0065714_10002458
369 Ga0065714_10003164
370 Ga0065714_10064787
371 Ga0065714_10064811
372 Ga0065714_10069650
373 Ga0065714_10072018
374 Ga0065704_10000462
375 Ga0065704_10003272
376 Ga0065704_10071284
377 Ga0065704_10079425
378 Ga0065704_10143622
379 Ga0070658_10003725
380 Ga0070658_10017399
381 Ga0070680_100039207
382 Ga0070682_100019998
383 Ga0070660_100020619
384 Ga0070671_100019935
385 Ga0070674_100096103
386 Ga0070673_100061735
387 Ga0070659_100004359
388 Ga0070663_100003942
389 Ga0070662_100002801
390 Ga0070681_10028638
391 Ga0068867_100001542
392 Ga0070665_100000367
393 Ga0068855_100000260
394 Ga0068855_100003876
395 Ga0068855_100006385
396 Ga0068855_100049072
397 Ga0068856_100001596
398 Ga0068856_100044047
399 Ga0068856_100059149
400 Ga0068852_100004305
401 Ga0068858_100147363
402 Ga0075366_10000298
403 Ga0075366_10009961
404 Ga0075366_10025782
405 Ga0097621_100000478
406 Ga0068871_100000353
407 Ga0068865_100008552
408 Ga0105244_10000004
409 Ga0105240_10003518
410 Ga0105240_10021963
411 Ga0105240_10094227
412 Ga0105240_10130782
413 Ga0105240_10166917
414 Ga0105243_10000003
415 Ga0105241_10027907
416 Ga0105241_10040503
417 Ga0105242_10020053
418 Ga0105237_10003989
419 Ga0105237_10004657
420 Ga0105237_10081840
421 Ga0105237_10097145
422 Ga0105237_10219336
423 Ga0105238_10024064
424 Ga0105239_10000142
425 Ga0105239_10001670
426 Ga0105239_10005011
427 Ga0105239_10024022
428 Ga0105239_10026268
429 Ga0105239_10061658
430 Ga0105239_10115316
431 Ga0157373_10002718
432 Ga0157373_10005238
433 Ga0157373_10008188
434 Ga0157373_10121603
435 Ga0157371_10001108
436 Ga0157371_10003740
437 Ga0157371_10004282
438 Ga0157371_10009245
439 Ga0157371_10078995
440 Ga0157370_10000935
441 Ga0157370_10012943
442 Ga0157370_10017284
443 Ga0157370_10017666
444 Ga0157370_10039142
445 Ga0157370_10122311
446 Ga0157370_10164258
447 Ga0157369_10000897
448 Ga0157369_10001172
449 Ga0157369_10022312
450 Ga0157369_10083865
451 Ga0157374_10006879
452 Ga0157374_10025859
453 Ga0157378_10023105
454 Ga0157378_10035567
455 Ga0163162_10001116
456 Ga0163162_10001647
457 Ga0163162_10058725
458 Ga0157372_10000042
459 Ga0157372_10017148
460 Ga0157372_10028252
461 Ga0157372_10048299
462 Ga0157372_10089409
463 Ga0157375_10034487
464 Ga0157375_10110525
465 Ga0157375_10182546
466 Ga0157375_10188122
467 Ga0163163_10043434
468 Ga0182008_10000024
469 Ga0182008_10001650
470 Ga0182008_10001930
471 Ga0182008_10036491
472 Ga0157376_10013868
473 Ga0182006_1000853
474 Ga0182006_1001310
475 Ga0182006_1001788
476 Ga0182006_1012671
477 Ga0182007_10000002
478 Ga0183373_1004
479 Ga0163161_10002656
480 Ga0163161_10012218
481 Ga0163161_10031005
482 Ga0163161_10053122
483 Ga0163161_10082056
484 Ga0209437_100666
485 Ga0207425_1000023
486 Ga0209026_1001689
487 Ga0209026_1002272
488 Ga0209129_1000032
489 Ga0209233_1001157
490 Ga0209676_1000009
491 Ga0209676_1001689
492 Ga0209025_1000047
493 Ga0209758_1000145
494 Ga0209050_1000094
495 Ga0207655_1000008
496 Ga0207647_10002986
497 Ga0207647_10013640
498 Ga0207647_10096901
499 Ga0207645_10001062
500 Ga0207705_10003190
501 Ga0207654_10008033
502 Ga0207707_10052049
503 Ga0207695_10002206
504 Ga0207695_10025674
505 Ga0207695_10049855
506 Ga0207695_10093040
507 Ga0207671_10001555
508 Ga0207671_10026095
509 Ga0207671_10032736
510 Ga0207660_10016871
511 Ga0207657_10054398
512 Ga0207644_10001516
513 Ga0207690_10002695
514 Ga0207706_10003974
515 Ga0207706_10041236
516 Ga0207709_10000008
517 Ga0207669_10047974
518 Ga0207704_10001260
519 Ga0207667_10000039
520 Ga0207667_10004116
521 Ga0207667_10019965
522 Ga0207667_10022684
523 Ga0207651_10073439
524 Ga0207640_10022862
525 Ga0207639_10017232
526 Ga0207678_10018368
527 Ga0207702_10010761
528 Ga0207702_10148338
529 Ga0207648_10001664
530 Ga0207683_10004981
531 Ga0268266_10000053
532 Ga0307517_10000515
533 Ga0307515_10000007
534 Ga0307515_10001900
535 Ga0307515_10009214
536 Ga0316177_1154660
537 Ga0316176_1021059
538 Ga0316183_1140892
539 Ga0316182_1426954
540 Ga0265327_10027920
541 Ga0265327_10097385
542 Ga0307509_10017333
543 Ga0307408_100001533
544 Ga0307408_100001621
545 Ga0307408_100004100
546 Ga0307405_10000002
547 Ga0307405_10000015
548 Ga0307405_10023626
549 Ga0307407_10000054
550 Ga0307412_10000030
551 Ga0307412_10001684
552 Ga0307412_10152273
553 Ga0307416_100000755
554 Ga0307414_10003205
555 Ga0307414_10007995
556 Ga0307414_10009568
557 Ga0307414_10017000
558 Ga0307414_10027878
559 Ga0307414_10045637
560 Ga0307510_10050434
561 Ga0395899_0000011
562 Ga0395899_0000238
563 Ga0395899_0000965
564 Ga0395900_0000647
565 Ga0395900_0007624
566 Ga0395900_0011798
567 Ga0395900_0110795
568 Ga0395900_0347312
569 Ga0395905_0001592
570 Ga0395905_0010825
571 Ga0395901_0001306
572 Ga0395901_0002487
573 Ga0395901_0368907
574 Ga0436361_0440542
575 Ga0439457_023083
576 Ga0451577_0002268
577 Ga0466966_0013924
578 Ga0453684_0004833
579 Ga0451576_0000012
580 Ga0495627_003436
581 Ga0495627_024407
582 Ga0495629_0067139
583 Ga0495650_0000144
584 Ga0495650_0029340
585 Ga0495585_0000880
586 Ga0495585_0001555
587 Ga0495607_0037506
588 Ga0495583_0026725
589 Ga0495606_0000926
590 Ga0495606_0020909
591 Ga0495606_0025417
592 Ga0495606_0091661
593 Ga0495606_0112933
594 Ga0495610_0000197
595 Ga0495610_0000974
596 Ga0495610_0003577
597 Ga0495616_0002914
598 Ga0495616_0003890
599 Ga0495628_0185976
600 Ga0495637_0014865
601 Ga0495637_0020849
602 Ga0495644_0004642
603 Ga0495652_0051543
604 Ga0495652_0171576
605 Ga0495609_0004581
606 Ga0495633_0000157
607 Ga0495633_0002133
608 Ga0495668_0000122
609 Ga0495625_0000059
610 Ga0495625_0000548
611 Ga0495625_0031659
612 Ga0495661_0009992
613 Ga0495661_0015674
614 Ga0495658_0017411
615 Ga0495649_0000031
616 Ga0495649_0024229
617 Ga0495660_0008136
618 Ga0495660_0046595
619 Ga0495683_0102019
620 Ga0495687_001478
621 Ga0495687_004531
622 Ga0495677_0016819
623 Ga0495673_0028148
624 Ga0495686_0001365
625 Ga0495614_0025252
626 Ga0496116_0015078
627 Ga0496117_0002754
628 Ga0496122_0001975
629 Ga0496122_0024040
630 Ga0496123_0011770
631 Ga0496123_0028553
632 Ga0496124_0028154
633 Ga0496125_0049477
634 Ga0501047_0081101
635 Ga0501249_000003
636 nmdc:mga0k408_17171_c1
637 nmdc:mga0k408_510_c1
638 nmdc:mga0k408_9210_c1
639 Ga0500635_0000336
640 Ga0500651_0000512
641 Ga0500641_0004086
642 Ga0500594_0017538
643 Ga0500608_004145
644 Ga0500618_001574
645 Ga0500624_000440
646 Ga0500584_004969
647 2513234452
648 2522550321
649 2586210680
650 2599479514
651 2722731145
652 2738755248
653 2738764353
654 2738856826
655 2739305083
656 2739588356
657 2739613882
658 2739648621
659 2776614931
660 2819550397
661 2833644237
662 2842723844
663 2842908261
664 2842912424
665 2849282847
666 2852632052
667 2857629225
668 2881248459
669 2890740191
670 2896347148
671 2898713917
672 2904449862
673 2904785788
674 2919182446
675 2919190157
676 2919440605
677 2928083937
678 2928152378
679 2932087743
680 2939668438
681 2945999394
682 2954021805
683 2958512595
684 2965323435
685 2977234311
686 3003237242

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04127

DFP

DNA / pantothenate metabolism flavoprotein

203

387

0.96

PF02441

Flavoprotein

Flavoprotein

23

196

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u7w-assembly1.cif.gz_A phosphopantothenoylcysteine synthetase from e. coli, ctp-complex 0.9663 185 395
1u7w-assembly1.cif.gz_B phosphopantothenoylcysteine synthetase from e. coli, ctp-complex 0.964 185 395
5int-assembly1.cif.gz_A crystal structure of the c-terminal domain of coenzyme a biosynthesis bifunctional protein coabc 0.9601 182 396
1u80-assembly1.cif.gz_B phosphopantothenoylcysteine synthetase from e. coli, cmp complex 0.9599 185 395
1u80-assembly2.cif.gz_C-2 phosphopantothenoylcysteine synthetase from e. coli, cmp complex 0.9568 185 395
ID Description Score Start End Superfamily
af_P0ABQ0_1_184_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9667 2 178 3.40.50.1950
af_Q2G268_186_399_3.40.50.10300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CoaB-like 0.9656 185 393 3.40.50.10300
1u7wB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CoaB-like 0.964 185 395 3.40.50.10300
af_Q2G268_1_185_3.40.50.1950 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavin prenyltransferase-like 0.9539 5 181 3.40.50.1950
5intA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;CoaB-like 0.9515 182 394 3.40.50.10300
ID Description Score Start End GO Terms
AF-A0A353YY61-F1-model_v4 Phosphopantothenoylcysteine decarboxylase 0.9937 250 397 GO:0003824
GO:0015937
AF-R5X2N4-F1-model_v4 deleted 0.9863 184 396
AF-A0A7C0VKM2-F1-model_v4 Phosphopantothenoylcysteine decarboxylase 0.9858 183 396 GO:0003824
GO:0015937
AF-A0A2U1B3G4-F1-model_v4 Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 0.9854 184 395 GO:0004632
GO:0004633
GO:0010181
GO:0015937
GO:0015941
AF-A0A2E9FYF5-F1-model_v4 deleted 0.9834 257 395

Map