F415488

General Info

Members Datasets Scaffolds Average Seq Length
343 183 687 476

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100000050|Ga0068855_100000050122
Length 547
Sequence MTARDVDDKLPHLWLFSFRSQQKERSGICYTESIMTIRTRFAPSPTGFLHVGNIRTGLFAYLVARHGNGTFVLRLEDTDKKREVEGSAAHLLRCLEVLGIRQDEGVDVGGPYAPYIQSERLDHYKKWGQKLIDNGRAYADPYTPEELNAFREQAKAEKRAFLYRHHRPENPPVWDGSQPLRFKSDPKSYTWHDEVMGELSTGPEVIDDIILIKSDGFPTYNFAHIVDDAEMHITHVIRGQEFISSQPNYLNLYEALDLTPPIFATMPHILATTGGKKLGKRDGAKDVLDYIRDGILPEALLNFIASLGWNDGTEQEIFSRDELIAKFTLDRVQRSGARFDEQRLIWMNGQWIRKLSIDELYSHTTGRRVGDASSTLRLDPGGASANSTGGEGTEASATIITNPTFWPASADSASIDHKKQILALVQDRLKTLKDLPLLTSYFFEDPTPDWDMLTDNKQLKKMERGEIVALLEDTIRTLEGSEWDANSLQQTLNALLETTGQKPGILFSLIRLSVSWAPFSPALNDTLATLGKETVLSRLKTALDTLS

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
60 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
61 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
62 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
63 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
102 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
105 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
106 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
107 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
108 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
109 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
112 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
113 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
114 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
115 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
116 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
117 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
118 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
119 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
124 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
125 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
134 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
135 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
136 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
137 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
138 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
143 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
148 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
153 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
154 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
157 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
160 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
161 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
171 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
172 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
173 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
174 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
175 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
176 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
179 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
180 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
181 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
182 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
183 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.57
Nodule 0
Rhizoplane 0.58
Rhizosphere 75.51
Stem 0
Stem Tuber 0
Unclassified 5.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100000050 3300005563 Bacteria 143762
2 MBSR1b_contig_7179877 2162886012 Bacteria 6511
3 JGI24741J21665_1001732 3300001915 Bacteria 6011
4 JGI24741J21665_1002014 3300001915 Bacteria 5463
5 JGI24740J21852_10029555 3300001979 Bacteria 1798
6 JGI24737J22298_10000007 3300001990 Bacteria 62489
7 JGI24735J21928_10000071 3300002067 Bacteria 42215
8 JGI24742J22300_10000005 3300002244 Bacteria 41211
9 rootH1_10002360 3300003316 Bacteria 56099
10 rootH1_10002360 3300003323 Bacteria 3372
11 rootH1_10022933 3300003316 Bacteria 2222
12 rootH1_10119518 3300003316 Bacteria 1780
13 rootH1_10000983 3300003323 Bacteria 67573
14 rootH1_10045900 3300003323 Bacteria 8693
15 rootH1_10059623 3300003323 Unclassified 2310
16 Ga0065715_10092748 3300005293 Bacteria 4948
17 Ga0070658_10000064 3300005327 Bacteria 106537
18 Ga0070658_10000071 3300005327 Bacteria 98592
19 Ga0070658_10001707 3300005327 Bacteria 18542
20 Ga0070658_10011569 3300005327 Bacteria 7078
21 Ga0070658_10026268 3300005327 Unclassified 4670
22 Ga0070683_100000790 3300005329 Bacteria 23356
23 Ga0070666_10039179 3300005335 Bacteria 3157
24 Ga0070680_100009527 3300005336 Bacteria 7460
25 Ga0070680_100044180 3300005336 Unclassified 3620
26 Ga0070682_100003293 3300005337 Bacteria 8955
27 Ga0070660_100000896 3300005339 Bacteria 19910
28 Ga0070691_10001928 3300005341 Bacteria 9117
29 Ga0070671_100000001 3300005355 Bacteria 1228151
30 Ga0070673_100000460 3300005364 Bacteria 21575
31 Ga0070659_100000963 3300005366 Bacteria 21180
32 Ga0070667_100000001 3300005367 Bacteria 1108638
33 Ga0070708_100041723 3300005445 Bacteria 4024
34 Ga0070678_100000800 3300005456 Bacteria 15838
35 Ga0070678_100050396 3300005456 Bacteria 3012
36 Ga0070681_10019098 3300005458 Bacteria 6860
37 Ga0070681_10089713 3300005458 Bacteria 3026
38 Ga0070685_10007526 3300005466 Bacteria 5575
39 Ga0070707_100040330 3300005468 Bacteria 4468
40 Ga0070699_100119888 3300005518 Bacteria 2313
41 Ga0070679_100000508 3300005530 Bacteria 33143
42 Ga0070679_100006868 3300005530 Bacteria 10612
43 Ga0070679_100028533 3300005530 Bacteria 5503
44 Ga0070679_100091111 3300005530 Bacteria 3037
45 Ga0070679_100128687 3300005530 Bacteria 2513
46 Ga0070684_100122886 3300005535 Bacteria 2336
47 Ga0070672_100028751 3300005543 Bacteria 4160
48 Ga0070665_100061943 3300005548 Bacteria 3751
49 Ga0068855_100000002 3300005563 Bacteria 616881
50 Ga0068855_100000003 3300005563 Bacteria 589862
51 Ga0068855_100005043 3300005563 Bacteria 16115
52 Ga0068855_100007286 3300005563 Bacteria 13398
53 Ga0070664_100000988 3300005564 Bacteria 22235
54 Ga0070664_100109350 3300005564 Bacteria 2411
55 Ga0068857_100000011 3300005577 Bacteria 106771
56 Ga0068857_100000018 3300005577 Bacteria 93371
57 Ga0068857_100004800 3300005577 Bacteria 11457
58 Ga0068857_100014886 3300005577 Bacteria 6784
59 Ga0068854_100006029 3300005578 Bacteria 7679
60 Ga0068856_100000001 3300005614 Bacteria 565602
61 Ga0068856_100000018 3300005614 Bacteria 151165
62 Ga0068856_100000151 3300005614 Bacteria 70749
63 Ga0068856_100003765 3300005614 Bacteria 15204
64 Ga0068856_100015600 3300005614 Bacteria 7346
65 Ga0068852_100000001 3300005616 Bacteria 716526
66 Ga0068852_100000045 3300005616 Bacteria 88494
67 Ga0068852_100039533 3300005616 Unclassified 3972
68 Ga0068863_100246955 3300005841 Bacteria 1723
69 Ga0068860_100003949 3300005843 Bacteria 15230
70 Ga0081455_10000680 3300005937 Bacteria 44122
71 Ga0075365_10000006 3300006038 Bacteria 123233
72 Ga0075365_10010785 3300006038 Bacteria 5342
73 Ga0075368_10000128 3300006042 Bacteria 20142
74 Ga0075363_100002623 3300006048 Bacteria 7405
75 Ga0075364_10000048 3300006051 Bacteria 43021
76 Ga0075364_10000781 3300006051 Bacteria 16736
77 Ga0075362_10000328 3300006177 Bacteria 13485
78 Ga0075369_10000002 3300006186 Bacteria 216197
79 Ga0075369_10000034 3300006186 Bacteria 36549
80 Ga0075369_10004794 3300006186 Bacteria 5029
81 Ga0075366_10000001 3300006195 Bacteria 569172
82 Ga0097621_100000001 3300006237 Bacteria 632268
83 Ga0097621_100000002 3300006237 Bacteria 172240
84 Ga0075370_10009634 3300006353 Bacteria 5026
85 Ga0075370_10028686 3300006353 Bacteria 3095
86 Ga0075370_10046753 3300006353 Bacteria 2450
87 Ga0068871_100000005 3300006358 Bacteria 123210
88 Ga0068871_100000101 3300006358 Bacteria 51177
89 Ga0068871_100030697 3300006358 Bacteria 4235
90 Ga0075428_100010367 3300006844 Bacteria 10345
91 Ga0068865_100013378 3300006881 Bacteria 5183
92 Ga0105240_10000003 3300009093 Bacteria 1183681
93 Ga0105240_10000004 3300009093 Bacteria 708156
94 Ga0105240_10013557 3300009093 Bacteria 11187
95 Ga0105240_10058691 3300009093 Bacteria 4804
96 Ga0105245_10000002 3300009098 Bacteria 634374
97 Ga0105245_10000155 3300009098 Bacteria 64286
98 Ga0105245_10001407 3300009098 Bacteria 21814
99 Ga0105245_10248397 3300009098 Bacteria 1727
100 Ga0105243_10000001 3300009148 Bacteria 1156578
101 Ga0105241_10000007 3300009174 Bacteria 343524
102 Ga0105241_10003702 3300009174 Bacteria 11362
103 Ga0105241_10008455 3300009174 Bacteria 7567
104 Ga0105241_10036131 3300009174 Bacteria 3717
105 Ga0105241_10166781 3300009174 Unclassified 1815
106 Ga0105242_10000002 3300009176 Bacteria 262559
107 Ga0105242_10000727 3300009176 Bacteria 25662
108 Ga0105237_10000001 3300009545 Bacteria 1009213
109 Ga0105237_10000002 3300009545 Bacteria 702357
110 Ga0105237_10008277 3300009545 Bacteria 11295
111 Ga0105238_10002660 3300009551 Bacteria 17764
112 Ga0105238_10032366 3300009551 Bacteria 5321
113 Ga0105238_10089076 3300009551 Bacteria 3073
114 Ga0105238_10291828 3300009551 Bacteria 1613
115 Ga0105032_100003 3300009979 Bacteria 186985
116 Ga0105032_100004 3300009979 Bacteria 172013
117 Ga0105032_100312 3300009979 Bacteria 4969
118 Ga0105029_100052 3300009984 Bacteria 5348
119 Ga0105033_100077 3300009986 Bacteria 7563
120 Ga0105030_100361 3300009987 Bacteria 3983
121 Ga0105028_100038 3300009993 Bacteria 14989
122 Ga0105239_10000722 3300010375 Bacteria 46895
123 Ga0105239_10019652 3300010375 Bacteria 7457
124 Ga0105239_10049470 3300010375 Bacteria 4609
125 Ga0105239_10081545 3300010375 Bacteria 3561
126 Ga0105246_10002672 3300011119 Bacteria 10803
127 Ga0157373_10008045 3300013100 Bacteria 7836
128 Ga0157373_10009393 3300013100 Bacteria 7222
129 Ga0157373_10021538 3300013100 Bacteria 4682
130 Ga0157370_10005985 3300013104 Bacteria 13536
131 Ga0157370_10012291 3300013104 Bacteria 8886
132 Ga0157369_10000024 3300013105 Bacteria 225851
133 Ga0157369_10000271 3300013105 Bacteria 69705
134 Ga0157369_10000643 3300013105 Bacteria 45102
135 Ga0157369_10019817 3300013105 Bacteria 7527
136 Ga0157369_10065019 3300013105 Bacteria 3928
137 Ga0157374_10000018 3300013296 Bacteria 286683
138 Ga0157374_10000317 3300013296 Bacteria 44873
139 Ga0157374_10003375 3300013296 Bacteria 13415
140 Ga0157374_10008767 3300013296 Bacteria 8653
141 Ga0157378_10006844 3300013297 Bacteria 9942
142 Ga0157372_10000002 3300013307 Bacteria 687862
143 Ga0157372_10000008 3300013307 Bacteria 305449
144 Ga0157376_10000007 3300014969 Bacteria 368004
145 Ga0157376_10000035 3300014969 Bacteria 151993
146 Ga0207680_10016409 3300025903 Bacteria 3887
147 Ga0207647_10050557 3300025904 Unclassified 2572
148 Ga0207705_10000065 3300025909 Bacteria 137123
149 Ga0207705_10000241 3300025909 Bacteria 53785
150 Ga0207705_10009411 3300025909 Bacteria 7104
151 Ga0207705_10014990 3300025909 Bacteria 5572
152 Ga0207705_10061517 3300025909 Unclassified 2712
153 Ga0207654_10000002 3300025911 Bacteria 1460142
154 Ga0207654_10008754 3300025911 Bacteria 5130
155 Ga0207707_10031781 3300025912 Bacteria 4621
156 Ga0207695_10000005 3300025913 Bacteria 1196715
157 Ga0207695_10000009 3300025913 Bacteria 1034276
158 Ga0207695_10002102 3300025913 Bacteria 30254
159 Ga0207695_10022572 3300025913 Bacteria 7138
160 Ga0207671_10000003 3300025914 Bacteria 1065461
161 Ga0207671_10000008 3300025914 Bacteria 798229
162 Ga0207657_10000697 3300025919 Bacteria 35688
163 Ga0207652_10003866 3300025921 Bacteria 12267
164 Ga0207652_10004497 3300025921 Bacteria 11328
165 Ga0207652_10005279 3300025921 Bacteria 10487
166 Ga0207646_10061694 3300025922 Bacteria 3346
167 Ga0207694_10004613 3300025924 Bacteria 10730
168 Ga0207694_10007093 3300025924 Bacteria 8512
169 Ga0207687_10000001 3300025927 Bacteria 1130810
170 Ga0207687_10000229 3300025927 Bacteria 38369
171 Ga0207687_10033464 3300025927 Bacteria 3486
172 Ga0207644_10000001 3300025931 Bacteria 1243214
173 Ga0207690_10005501 3300025932 Bacteria 7473
174 Ga0207686_10000001 3300025934 Bacteria 1169580
175 Ga0207686_10033357 3300025934 Bacteria 3073
176 Ga0207709_10000002 3300025935 Bacteria 1171536
177 Ga0207669_10030458 3300025937 Bacteria 2998
178 Ga0207691_10033842 3300025940 Bacteria 4757
179 Ga0207661_10062792 3300025944 Bacteria 3006
180 Ga0207679_10000813 3300025945 Bacteria 20143
181 Ga0207667_10000005 3300025949 Bacteria 715503
182 Ga0207667_10000008 3300025949 Bacteria 625138
183 Ga0207667_10000096 3300025949 Bacteria 143776
184 Ga0207667_10000668 3300025949 Bacteria 44390
185 Ga0207667_10002265 3300025949 Bacteria 24185
186 Ga0207667_10007191 3300025949 Bacteria 13429
187 Ga0207651_10000247 3300025960 Bacteria 23298
188 Ga0207640_10002999 3300025981 Bacteria 9082
189 Ga0207658_10000003 3300025986 Bacteria 1151934
190 Ga0207702_10000100 3300026078 Bacteria 99927
191 Ga0207702_10000112 3300026078 Bacteria 94838
192 Ga0207702_10000166 3300026078 Bacteria 78767
193 Ga0207702_10010322 3300026078 Bacteria 7822
194 Ga0207702_10020973 3300026078 Bacteria 5407
195 Ga0207674_10000001 3300026116 Bacteria 616581
196 Ga0207674_10000215 3300026116 Bacteria 71809
197 Ga0207674_10027787 3300026116 Bacteria 5978
198 Ga0207674_10043155 3300026116 Bacteria 4651
199 Ga0207674_10206121 3300026116 Bacteria 1915
200 Ga0207683_10002557 3300026121 Bacteria 15878
201 Ga0207683_10064476 3300026121 Bacteria 3228
202 Ga0207698_10000022 3300026142 Bacteria 131985
203 Ga0207698_10000165 3300026142 Bacteria 41957
204 Ga0207698_10091372 3300026142 Bacteria 2492
205 Ga0209813_10000234 3300027866 Bacteria 16776
206 Ga0209974_10007745 3300027876 Bacteria 3692
207 Ga0268264_10007727 3300028381 Bacteria 8957
208 Ga0265326_10001164 3300028558 Bacteria 9410
209 Ga0265326_10011559 3300028558 Archaea 2599
210 Ga0265319_1031094 3300028563 Bacteria 1861
211 Ga0265334_10000025 3300028573 Bacteria 117961
212 Ga0265334_10008299 3300028573 Bacteria 4419
213 Ga0265334_10010860 3300028573 Unclassified 3844
214 Ga0265318_10017104 3300028577 Archaea 2982
215 Ga0265322_10000761 3300028654 Bacteria 11677
216 Ga0265336_10000069 3300028666 Bacteria 89776
217 Ga0265338_10000130 3300028800 Bacteria 137739
218 Ga0265338_10000381 3300028800 Bacteria 79305
219 Ga0265338_10000575 3300028800 Bacteria 64813
220 Ga0265338_10001823 3300028800 Bacteria 33421
221 Ga0265338_10002379 3300028800 Bacteria 28345
222 Ga0265338_10006446 3300028800 Bacteria 14961
223 Ga0265324_10002003 3300029957 Bacteria 10879
224 Ga0316179_1058425 3300030734 Bacteria 13049
225 Ga0316183_1162347 3300030742 Bacteria 5083
226 Ga0316181_1063761 3300030744 Bacteria 284591
227 Ga0316182_1005563 3300030745 Bacteria 22286
228 Ga0316182_1031407 3300030745 Bacteria 19779
229 Ga0316182_1143068 3300030745 Bacteria 4777
230 Ga0265328_10006372 3300031239 Bacteria 5004
231 Ga0265320_10041772 3300031240 Archaea 2278
232 Ga0265325_10013952 3300031241 Archaea 4557
233 Ga0265325_10058942 3300031241 Bacteria 1954
234 Ga0265340_10000101 3300031247 Bacteria 41410
235 Ga0265331_10051061 3300031250 Unclassified 1981
236 Ga0265327_10000017 3300031251 Bacteria 445264
237 Ga0265327_10001670 3300031251 Bacteria 26672
238 Ga0265327_10002990 3300031251 Bacteria 16791
239 Ga0265327_10018401 3300031251 Unclassified 4333
240 Ga0265327_10060615 3300031251 Unclassified 1933
241 Ga0265316_10010247 3300031344 Bacteria 8554
242 Ga0265314_10002876 3300031711 Bacteria 17098
243 Ga0265342_10014741 3300031712 Bacteria 5176
244 Ga0307516_10009830 3300031730 Bacteria 10609
245 Ga0307406_10000002 3300031901 Bacteria 255753
246 Ga0307406_10000102 3300031901 Bacteria 49288
247 Ga0373959_0000001 3300034820 Bacteria 189143
248 Ga0395899_0004473 3300037312 Bacteria 10900
249 Ga0395899_0019327 3300037312 Bacteria 5176
250 Ga0395899_0021295 3300037312 Bacteria 4918
251 Ga0395899_0058162 3300037312 Bacteria 2852
252 Ga0395900_0000001 3300037418 Bacteria 931146
253 Ga0395900_0000781 3300037418 Bacteria 42249
254 Ga0395900_0004117 3300037418 Bacteria 15485
255 Ga0395900_0017322 3300037418 Bacteria 7354
256 Ga0395898_0000002 3300037466 Bacteria 931013
257 Ga0395898_0002090 3300037466 Bacteria 24833
258 Ga0395905_0002200 3300037471 Bacteria 22030
259 Ga0395905_0058191 3300037471 Bacteria 3615
260 Ga0395901_0000072 3300038443 Bacteria 140394
261 Ga0395901_0001569 3300038443 Bacteria 23673
262 Ga0395901_0055334 3300038443 Bacteria 4126
263 Ga0395901_0089240 3300038443 Bacteria 3226
264 Ga0439461_0000450 3300041410 Bacteria 5937
265 Ga0439432_018990 3300042006 Bacteria 2293
266 Ga0450906_001460 3300042145 Bacteria 5147
267 Ga0439446_0000033 3300042156 Bacteria 21721
268 Ga0495629_0021059 3300046459 Bacteria 4652
269 Ga0495638_0000245 3300046460 Bacteria 74379
270 Ga0495638_0000682 3300046460 Bacteria 36908
271 Ga0495622_0000224 3300046557 Bacteria 44888
272 Ga0495588_0000398 3300046674 Bacteria 24652
273 Ga0495658_0001326 3300046683 Bacteria 12983
274 Ga0495600_0001852 3300046809 Bacteria 11863
275 Ga0495660_0000175 3300046810 Bacteria 69454
276 Ga0495672_0067112 3300047320 Bacteria 2044
277 Ga0496112_0012443 3300048915 Bacteria 7824
278 Ga0496115_0000007 3300048918 Bacteria 244991
279 Ga0496124_0021262 3300048927 Bacteria 5982
280 Ga0501034_0008616 3300049571 Bacteria 10763
281 Ga0501034_0016677 3300049571 Bacteria 7530
282 Ga0501038_0015635 3300049574 Bacteria 6898
283 Ga0501070_0094898 3300049586 Bacteria 2469
284 Ga0501083_0008188 3300049744 Bacteria 7396
285 nmdc:mga03683_350_c1 3300050489 Bacteria 13419
286 nmdc:mga03683_4587_c1 3300050489 Bacteria 4037
287 nmdc:mga00v17_101_c1 3300050491 Bacteria 50798
288 nmdc:mga00v17_14584_c1 3300050491 Bacteria 4391
289 nmdc:mga0yw44_12552_c1 3300050492 Unclassified 4421
290 nmdc:mga0yw44_1_c1 3300050492 Bacteria 702221
291 nmdc:mga0yw44_258_c1 3300050492 Bacteria 18119
292 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
293 nmdc:mga0yw44_6_c1 3300050492 Bacteria 272478
294 nmdc:mga0k408_14292_c1 3300050493 Unclassified 4370
295 nmdc:mga0k408_14687_c1 3300050493 Bacteria 4320
296 nmdc:mga0k408_17200_c1 3300050493 Unclassified 4025
297 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
298 nmdc:mga04h51_219_c1 3300050495 Bacteria 15308
299 nmdc:mga07m45_17175_c1 3300050496 Unclassified 3881
300 nmdc:mga07m45_24164_c1 3300050496 Unclassified 3327
301 nmdc:mga07m45_28202_c1 3300050496 Bacteria 3099
302 nmdc:mga0n895_353132_c1 3300050512 Unclassified 1489
303 nmdc:mga0sz30_10134_c1 3300050516 Bacteria 3082
304 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
305 nmdc:mga0sz30_21271_c1 3300050516 Bacteria 2624
306 nmdc:mga0sz30_4_c2 3300050516 Bacteria 152717
307 Ga0500610_0000002 3300053079 Bacteria 166752
308 Ga0500643_000010 3300053087 Bacteria 408084
309 Ga0500643_008048 3300053087 Unclassified 4177
310 Ga0500643_014879 3300053087 Bacteria 2686
311 Ga0500644_0000018 3300053088 Bacteria 104498
312 Ga0500646_0000001 3300053090 Bacteria 273936
313 Ga0500646_0000543 3300053090 Bacteria 11028
314 Ga0500583_0001362 3300053092 Bacteria 7004
315 Ga0500583_0003592 3300053092 Bacteria 4910
316 Ga0500651_0000001 3300053093 Bacteria 529808
317 Ga0500651_0001039 3300053093 Bacteria 13715
318 Ga0500566_0000001 3300053094 Bacteria 1101031
319 Ga0500641_0000001 3300053096 Bacteria 1115973
320 Ga0500650_0000001 3300053098 Bacteria 818797
321 Ga0500650_0014690 3300053098 Bacteria 3318
322 Ga0500555_000002 3300053103 Bacteria 1314346
323 Ga0500555_000005 3300053103 Bacteria 342334
324 Ga0500569_000025 3300053109 Bacteria 36908
325 Ga0500593_000001 3300053117 Bacteria 784404
326 Ga0500594_0000001 3300053118 Bacteria 1178472
327 Ga0500594_0000059 3300053118 Bacteria 34051
328 Ga0500594_0000098 3300053118 Bacteria 25544
329 Ga0500614_000001 3300053123 Bacteria 1274484
330 Ga0500614_000800 3300053123 Bacteria 7974
331 Ga0500628_000048 3300053129 Bacteria 42050
332 Ga0500652_000007 3300053131 Bacteria 165913
333 Ga0500652_000082 3300053131 Bacteria 40714
334 Ga0500655_000350 3300053133 Bacteria 10041
335 Ga0500655_000377 3300053133 Bacteria 9587
336 Ga0500568_0012296 3300053139 Bacteria 3943
337 Ga0500577_0001119 3300053142 Bacteria 6863
338 Ga0500577_0001461 3300053142 Bacteria 6037
339 Ga0500579_000457 3300053143 Bacteria 23670
340 Ga0500588_0000020 3300053146 Bacteria 40592
341 Ga0500616_0000067 3300053153 Bacteria 236311
342 Ga0500649_000026 3300053722 Bacteria 32554
343 Ga0500570_000003 3300053724 Bacteria 149500
344 Ga0500570_006944 3300053724 Bacteria 6175
345 Ga0068855_100000050
346 MBSR1b_contig_7179877
347 JGI24741J21665_1001732
348 JGI24741J21665_1002014
349 JGI24740J21852_10029555
350 JGI24737J22298_10000007
351 JGI24735J21928_10000071
352 JGI24742J22300_10000005
353 rootH1_10002360
354 rootH1_10022933
355 rootH1_10119518
356 rootH1_10000983
357 rootH1_10045900
358 rootH1_10059623
359 Ga0065715_10092748
360 Ga0070658_10000064
361 Ga0070658_10000071
362 Ga0070658_10001707
363 Ga0070658_10011569
364 Ga0070658_10026268
365 Ga0070683_100000790
366 Ga0070666_10039179
367 Ga0070680_100009527
368 Ga0070680_100044180
369 Ga0070682_100003293
370 Ga0070660_100000896
371 Ga0070691_10001928
372 Ga0070671_100000001
373 Ga0070673_100000460
374 Ga0070659_100000963
375 Ga0070667_100000001
376 Ga0070708_100041723
377 Ga0070678_100000800
378 Ga0070678_100050396
379 Ga0070681_10019098
380 Ga0070681_10089713
381 Ga0070685_10007526
382 Ga0070707_100040330
383 Ga0070699_100119888
384 Ga0070679_100000508
385 Ga0070679_100006868
386 Ga0070679_100028533
387 Ga0070679_100091111
388 Ga0070679_100128687
389 Ga0070684_100122886
390 Ga0070672_100028751
391 Ga0070665_100061943
392 Ga0068855_100000002
393 Ga0068855_100000003
394 Ga0068855_100005043
395 Ga0068855_100007286
396 Ga0070664_100000988
397 Ga0070664_100109350
398 Ga0068857_100000011
399 Ga0068857_100000018
400 Ga0068857_100004800
401 Ga0068857_100014886
402 Ga0068854_100006029
403 Ga0068856_100000001
404 Ga0068856_100000018
405 Ga0068856_100000151
406 Ga0068856_100003765
407 Ga0068856_100015600
408 Ga0068852_100000001
409 Ga0068852_100000045
410 Ga0068852_100039533
411 Ga0068863_100246955
412 Ga0068860_100003949
413 Ga0081455_10000680
414 Ga0075365_10000006
415 Ga0075365_10010785
416 Ga0075368_10000128
417 Ga0075363_100002623
418 Ga0075364_10000048
419 Ga0075364_10000781
420 Ga0075362_10000328
421 Ga0075369_10000002
422 Ga0075369_10000034
423 Ga0075369_10004794
424 Ga0075366_10000001
425 Ga0097621_100000001
426 Ga0097621_100000002
427 Ga0075370_10009634
428 Ga0075370_10028686
429 Ga0075370_10046753
430 Ga0068871_100000005
431 Ga0068871_100000101
432 Ga0068871_100030697
433 Ga0075428_100010367
434 Ga0068865_100013378
435 Ga0105240_10000003
436 Ga0105240_10000004
437 Ga0105240_10013557
438 Ga0105240_10058691
439 Ga0105245_10000002
440 Ga0105245_10000155
441 Ga0105245_10001407
442 Ga0105245_10248397
443 Ga0105243_10000001
444 Ga0105241_10000007
445 Ga0105241_10003702
446 Ga0105241_10008455
447 Ga0105241_10036131
448 Ga0105241_10166781
449 Ga0105242_10000002
450 Ga0105242_10000727
451 Ga0105237_10000001
452 Ga0105237_10000002
453 Ga0105237_10008277
454 Ga0105238_10002660
455 Ga0105238_10032366
456 Ga0105238_10089076
457 Ga0105238_10291828
458 Ga0105032_100003
459 Ga0105032_100004
460 Ga0105032_100312
461 Ga0105029_100052
462 Ga0105033_100077
463 Ga0105030_100361
464 Ga0105028_100038
465 Ga0105239_10000722
466 Ga0105239_10019652
467 Ga0105239_10049470
468 Ga0105239_10081545
469 Ga0105246_10002672
470 Ga0157373_10008045
471 Ga0157373_10009393
472 Ga0157373_10021538
473 Ga0157370_10005985
474 Ga0157370_10012291
475 Ga0157369_10000024
476 Ga0157369_10000271
477 Ga0157369_10000643
478 Ga0157369_10019817
479 Ga0157369_10065019
480 Ga0157374_10000018
481 Ga0157374_10000317
482 Ga0157374_10003375
483 Ga0157374_10008767
484 Ga0157378_10006844
485 Ga0157372_10000002
486 Ga0157372_10000008
487 Ga0157376_10000007
488 Ga0157376_10000035
489 Ga0207680_10016409
490 Ga0207647_10050557
491 Ga0207705_10000065
492 Ga0207705_10000241
493 Ga0207705_10009411
494 Ga0207705_10014990
495 Ga0207705_10061517
496 Ga0207654_10000002
497 Ga0207654_10008754
498 Ga0207707_10031781
499 Ga0207695_10000005
500 Ga0207695_10000009
501 Ga0207695_10002102
502 Ga0207695_10022572
503 Ga0207671_10000003
504 Ga0207671_10000008
505 Ga0207657_10000697
506 Ga0207652_10003866
507 Ga0207652_10004497
508 Ga0207652_10005279
509 Ga0207646_10061694
510 Ga0207694_10004613
511 Ga0207694_10007093
512 Ga0207687_10000001
513 Ga0207687_10000229
514 Ga0207687_10033464
515 Ga0207644_10000001
516 Ga0207690_10005501
517 Ga0207686_10000001
518 Ga0207686_10033357
519 Ga0207709_10000002
520 Ga0207669_10030458
521 Ga0207691_10033842
522 Ga0207661_10062792
523 Ga0207679_10000813
524 Ga0207667_10000005
525 Ga0207667_10000008
526 Ga0207667_10000096
527 Ga0207667_10000668
528 Ga0207667_10002265
529 Ga0207667_10007191
530 Ga0207651_10000247
531 Ga0207640_10002999
532 Ga0207658_10000003
533 Ga0207702_10000100
534 Ga0207702_10000112
535 Ga0207702_10000166
536 Ga0207702_10010322
537 Ga0207702_10020973
538 Ga0207674_10000001
539 Ga0207674_10000215
540 Ga0207674_10027787
541 Ga0207674_10043155
542 Ga0207674_10206121
543 Ga0207683_10002557
544 Ga0207683_10064476
545 Ga0207698_10000022
546 Ga0207698_10000165
547 Ga0207698_10091372
548 Ga0209813_10000234
549 Ga0209974_10007745
550 Ga0268264_10007727
551 Ga0265326_10001164
552 Ga0265326_10011559
553 Ga0265319_1031094
554 Ga0265334_10000025
555 Ga0265334_10008299
556 Ga0265334_10010860
557 Ga0265318_10017104
558 Ga0265322_10000761
559 Ga0265336_10000069
560 Ga0265338_10000130
561 Ga0265338_10000381
562 Ga0265338_10000575
563 Ga0265338_10001823
564 Ga0265338_10002379
565 Ga0265338_10006446
566 Ga0265324_10002003
567 Ga0316179_1058425
568 Ga0316183_1162347
569 Ga0316181_1063761
570 Ga0316182_1005563
571 Ga0316182_1031407
572 Ga0316182_1143068
573 Ga0265328_10006372
574 Ga0265320_10041772
575 Ga0265325_10013952
576 Ga0265325_10058942
577 Ga0265340_10000101
578 Ga0265331_10051061
579 Ga0265327_10000017
580 Ga0265327_10001670
581 Ga0265327_10002990
582 Ga0265327_10018401
583 Ga0265327_10060615
584 Ga0265316_10010247
585 Ga0265314_10002876
586 Ga0265342_10014741
587 Ga0307516_10009830
588 Ga0307406_10000002
589 Ga0307406_10000102
590 Ga0373959_0000001
591 Ga0395899_0004473
592 Ga0395899_0019327
593 Ga0395899_0021295
594 Ga0395899_0058162
595 Ga0395900_0000001
596 Ga0395900_0000781
597 Ga0395900_0004117
598 Ga0395900_0017322
599 Ga0395898_0000002
600 Ga0395898_0002090
601 Ga0395905_0002200
602 Ga0395905_0058191
603 Ga0395901_0000072
604 Ga0395901_0001569
605 Ga0395901_0055334
606 Ga0395901_0089240
607 Ga0439461_0000450
608 Ga0439432_018990
609 Ga0450906_001460
610 Ga0439446_0000033
611 Ga0495629_0021059
612 Ga0495638_0000245
613 Ga0495638_0000682
614 Ga0495622_0000224
615 Ga0495588_0000398
616 Ga0495658_0001326
617 Ga0495600_0001852
618 Ga0495660_0000175
619 Ga0495672_0067112
620 Ga0496112_0012443
621 Ga0496115_0000007
622 Ga0496124_0021262
623 Ga0501034_0008616
624 Ga0501034_0016677
625 Ga0501038_0015635
626 Ga0501070_0094898
627 Ga0501083_0008188
628 nmdc:mga03683_350_c1
629 nmdc:mga03683_4587_c1
630 nmdc:mga00v17_101_c1
631 nmdc:mga00v17_14584_c1
632 nmdc:mga0yw44_12552_c1
633 nmdc:mga0yw44_1_c1
634 nmdc:mga0yw44_258_c1
635 nmdc:mga0yw44_2_c1
636 nmdc:mga0yw44_6_c1
637 nmdc:mga0k408_14292_c1
638 nmdc:mga0k408_14687_c1
639 nmdc:mga0k408_17200_c1
640 nmdc:mga0k408_1_c1
641 nmdc:mga04h51_219_c1
642 nmdc:mga07m45_17175_c1
643 nmdc:mga07m45_24164_c1
644 nmdc:mga07m45_28202_c1
645 nmdc:mga0n895_353132_c1
646 nmdc:mga0sz30_10134_c1
647 nmdc:mga0sz30_1_c1
648 nmdc:mga0sz30_21271_c1
649 nmdc:mga0sz30_4_c2
650 Ga0500610_0000002
651 Ga0500643_000010
652 Ga0500643_008048
653 Ga0500643_014879
654 Ga0500644_0000018
655 Ga0500646_0000001
656 Ga0500646_0000543
657 Ga0500583_0001362
658 Ga0500583_0003592
659 Ga0500651_0000001
660 Ga0500651_0001039
661 Ga0500566_0000001
662 Ga0500641_0000001
663 Ga0500650_0000001
664 Ga0500650_0014690
665 Ga0500555_000002
666 Ga0500555_000005
667 Ga0500569_000025
668 Ga0500593_000001
669 Ga0500594_0000001
670 Ga0500594_0000059
671 Ga0500594_0000098
672 Ga0500614_000001
673 Ga0500614_000800
674 Ga0500628_000048
675 Ga0500652_000007
676 Ga0500652_000082
677 Ga0500655_000350
678 Ga0500655_000377
679 Ga0500568_0012296
680 Ga0500577_0001119
681 Ga0500577_0001461
682 Ga0500579_000457
683 Ga0500588_0000020
684 Ga0500616_0000067
685 Ga0500649_000026
686 Ga0500570_000003
687 Ga0500570_006944

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

36

346

0.93

PF19269

Anticodon_2

Anticodon binding domain

402

543

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.876 1 464
2o5r-assembly1.cif.gz_A crystal structure of glutamyl-trna synthetase 1 (ec 6.1.1.17) (glutamate-trna ligase 1) (glurs 1) (tm1351) from thermotoga maritima at 2.5 a resolution 0.8738 1 460
6brl-assembly1.cif.gz_A crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid 0.8707 1 464
3pnv-assembly1.cif.gz_A v369m mutant of glutamyl-trna synthetase from mycobacterium tuberculosis 0.8705 2 460
1g59-assembly1.cif.gz_A glutamyl-trna synthetase complexed with trna(glu). 0.865 2 461
ID Description Score Start End Superfamily
5h4vC03 Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 0.9543 233 309 1.10.1160.10
1nzjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9456 1 60 3.40.50.620
af_Q869Z3_49_403_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9378 1 311 3.40.50.620
3pnvB05 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9342 386 460 1.10.10.350
af_Q9FEA2_46_378_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9308 1 309 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A3D4ISX9-F1-model_v4 deleted 0.9906 359 461
AF-A0A7T9IR32-F1-model_v4 deleted 0.99 1 213
AF-A0A2V7NUX3-F1-model_v4 Glutamate--tRNA ligase 0.9694 147 281 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A7C1DT72-F1-model_v4 Glutamate--tRNA ligase 0.9664 2 308 GO:0004818
GO:0005524
GO:0005829
GO:0006424
GO:0008270
AF-A0A2M7TXV0-F1-model_v4 Glutamate--tRNA ligase 0.9638 194 323 GO:0004818
GO:0005524
GO:0005829
GO:0006424

Map