F415697

General Info

Members Datasets Scaffolds Average Seq Length
343 217 686 472

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0010162|Ga0453684_0010162_6260_8170
Length 554
Sequence VVRAWSYGGGGRVQDRCVIGTQEKSLDYSHGEFRCGRHGRAIAVPEKFLFFQGRPQDFPVAMPTGCGGCAFVAVFSTCDGNNVVLTSSAIIFQVPPTMSDPLYLAKSEDGFPALLPQMTNRHGLITGATGTGKTVTLQSMAERLSYAGVPVFMADVKGDLSGMGAAGTLTPKLEARVKELGLDGFTPFANPVTFWDVFGTGGIPVRATISDMGPLLLGRLLNLNDTQTGVLQLVFKIADDQGLLLLDLKDLRAMVQYVGDNASQFKTEYGNVSTASIGAIQRGLLTLDEQGGGLFFGEPMLDINDLMQVDGNGRGVINVLAAEKLVQAPALYSTFLLWLLSELFEQLPEAGDLDKPKLVFFFDEAHLLFSDSPQALVDKVEQVVRLIRSKGVGVYFVTQNPLDVPEKILGQLGNRVQHALRAFTPRDQKAVQAAAETMRANPKFDAATAITELGVGEALVSFLDEKGRPNVVERAVIFPPASRLGPLTAEERQAAIQASPQLATYGQAIDRESAYEKLRGQPAAATKKTAPGAITRVSQSESGGGLLDALGGRR

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
17 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
25 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
26 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
27 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300015679 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 Metagenome Unclassified
44 3300015680 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 Metagenome Rhizosphere
45 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
46 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
74 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
82 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
86 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
87 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
88 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
89 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
90 3300044669 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E Metagenome Unclassified
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
93 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
97 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
98 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
101 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
102 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
107 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
108 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
109 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
110 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
113 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
114 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
115 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
116 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
121 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
124 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
127 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
128 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
156 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
157 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
164 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
165 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
166 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
169 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
170 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
175 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
179 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
186 2547132416 Enterobacter sp. MR1 Isolate Rhizoplane
187 2574179768 Azoarcus communis DSM 12120 Isolate Unclassified
188 2602042047 Enterobacter sp. NFIX59 Isolate Rhizoplane
189 2602042066 Enterobacter sp. NFIX45 Isolate Rhizoplane
190 2602042067 Enterobacter sp. NFIX58 Isolate Rhizoplane
191 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
192 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
193 2681812866 Enterobacter asburiae NFIX55 Isolate Rhizoplane
194 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
195 2721755523 Delftia sp. HK171 Isolate Unclassified
196 2751185917 Enterobacter sp. HK169 Isolate Unclassified
197 2765235842 Enterobacter ludwigii AA4 Isolate Unclassified
198 2775506706 Enterobacter asburiae 1216 Isolate Unclassified
199 2821118458 Enterobacter asburiae 609 Isolate Unclassified
200 2823373977 Enterobacter ludwigii NCR3 Isolate Rhizosphere
201 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
202 2844425489 Enterobacter cloacae SBP-8 Isolate Rhizosphere
203 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
204 2891670763 Buttiauxella sp. B2 Isolate Rhizosphere
205 2919543075 Aeromonas salmonicida masoucida 4076 Isolate Unclassified
206 2923525760 Aeromonas caviae SLBN-129 Isolate Rhizosphere
207 2923634449 Enterobacter kobei SLBN-76 Isolate Rhizosphere
208 2927833300 Enterobacter sp. SLBN-59 Isolate Rhizosphere
209 2937539931 Pantoea sp. LS15 Isolate Unclassified
210 2939568625 Lelliottia sp. 489 Isolate Rhizosphere
211 2939607340 Leclercia sp. 1548 Isolate Rhizosphere
212 2939642701 Lelliottia nimipressuralis 2756 Isolate Rhizosphere
213 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
214 639633007 Azoarcus olearius BH72 Isolate Unclassified
215 8018221730 Enterobacter sp. CM29 Isolate Unclassified
216 8018405270 Enterobacter sp. 198 Isolate Rhizosphere
217 8055097453 Leclercia tamurae H6W5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.38
Metatranscriptomes 0
Isolates 9.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.5
Nodule 4.08
Rhizoplane 3.5
Rhizosphere 73.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0010162 3300044712 Bacteria 16152
2 SwRhRL2b_contig_511679 2162886007 Bacteria 7015
3 Ga0058692_1002680 3300003856 Bacteria 5857
4 Ga0058692_1002688 3300003856 Bacteria 5852
5 Ga0065704_10002257 3300005289 Bacteria 8933
6 Ga0065704_10002959 3300005289 Bacteria 4498
7 Ga0065704_10072945 3300005289 Bacteria 7768
8 Ga0065704_10083885 3300005289 Bacteria 3404
9 Ga0065704_10097605 3300005289 Bacteria 2387
10 Ga0070674_100011255 3300005356 Bacteria 5440
11 Ga0070688_100005891 3300005365 Bacteria 6490
12 Ga0070688_100040562 3300005365 Bacteria 2853
13 Ga0070659_100207978 3300005366 Bacteria 1612
14 Ga0070701_10021430 3300005438 Bacteria 3084
15 Ga0070698_100023772 3300005471 Bacteria 6399
16 Ga0070684_100031077 3300005535 Bacteria 4544
17 Ga0070665_100000664 3300005548 Bacteria 46359
18 Ga0070665_100047714 3300005548 Bacteria 4298
19 Ga0070704_100023263 3300005549 Bacteria 4043
20 Ga0070704_100035957 3300005549 Bacteria 3371
21 Ga0068857_100000020 3300005577 Bacteria 89305
22 Ga0068852_100134721 3300005616 Bacteria 2280
23 Ga0068866_10001027 3300005718 Bacteria 12279
24 Ga0068851_10004630 3300005834 Bacteria 6210
25 Ga0068870_10039753 3300005840 Bacteria 2435
26 Ga0068860_100146998 3300005843 Bacteria 2268
27 Ga0081539_10042277 3300005985 Bacteria 2656
28 Ga0075364_10029125 3300006051 Bacteria 3539
29 Ga0075364_10047151 3300006051 Bacteria 2806
30 Ga0075366_10000327 3300006195 Bacteria 21754
31 Ga0075366_10005716 3300006195 Bacteria 6751
32 Ga0075431_100103390 3300006847 Bacteria 2940
33 Ga0068865_100083705 3300006881 Bacteria 2297
34 Ga0079104_1000496 3300006946 Bacteria 42657
35 Ga0079104_1000660 3300006946 Bacteria 32875
36 Ga0079104_1001871 3300006946 Bacteria 12750
37 Ga0079104_1002970 3300006946 Bacteria 8351
38 Ga0079104_1004618 3300006946 Bacteria 5802
39 Ga0079104_1005364 3300006946 Bacteria 5143
40 Ga0105251_10002659 3300009011 Bacteria 13774
41 Ga0105251_10004402 3300009011 Bacteria 9599
42 Ga0105251_10009214 3300009011 Bacteria 5855
43 Ga0105244_10000422 3300009036 Bacteria 39194
44 Ga0105244_10001144 3300009036 Bacteria 22014
45 Ga0105244_10009347 3300009036 Bacteria 6033
46 Ga0105244_10009606 3300009036 Bacteria 5929
47 Ga0105250_10000674 3300009092 Bacteria 21525
48 Ga0105250_10006521 3300009092 Bacteria 5094
49 Ga0105240_10275010 3300009093 Bacteria 1938
50 Ga0111539_10158974 3300009094 Bacteria 2643
51 Ga0111539_10223189 3300009094 Bacteria 2195
52 Ga0105245_10038729 3300009098 Bacteria 4242
53 Ga0114129_10018558 3300009147 Bacteria 9902
54 Ga0105243_10010470 3300009148 Bacteria 7043
55 Ga0105243_10085223 3300009148 Bacteria 2589
56 Ga0105242_10044071 3300009176 Bacteria 3611
57 Ga0105248_10145416 3300009177 Bacteria 2675
58 Ga0105246_10014419 3300011119 Bacteria 4971
59 Ga0157373_10094177 3300013100 Bacteria 2109
60 Ga0157371_10023066 3300013102 Bacteria 4551
61 Ga0157371_10037770 3300013102 Bacteria 3456
62 Ga0157370_10008700 3300013104 Bacteria 10924
63 Ga0157378_10013671 3300013297 Bacteria 7099
64 Ga0163162_10159154 3300013306 Bacteria 2380
65 Ga0157380_10030428 3300014326 Bacteria 4134
66 Ga0157380_10054573 3300014326 Bacteria 3171
67 Ga0157379_10053427 3300014968 Bacteria 3608
68 Ga0183366_1002 3300015679 Bacteria 791639
69 Ga0183370_1002 3300015680 Bacteria 791639
70 Ga0183369_1002 3300015685 Bacteria 791621
71 Ga0183368_1005 3300015687 Bacteria 791621
72 Ga0163161_10086040 3300017792 Bacteria 2320
73 Ga0213876_10019084 3300021384 Bacteria 3621
74 Ga0209148_1000488 3300025254 Bacteria 40976
75 Ga0209455_1002001 3300025272 Bacteria 8364
76 Ga0207697_10006337 3300025315 Bacteria 5369
77 Ga0207696_1001078 3300025711 Bacteria 16100
78 Ga0207655_1000065 3300025728 Bacteria 252767
79 Ga0207655_1000640 3300025728 Bacteria 41855
80 Ga0207655_1000966 3300025728 Bacteria 29667
81 Ga0207655_1006918 3300025728 Bacteria 7441
82 Ga0207655_1010980 3300025728 Bacteria 5438
83 Ga0207713_1000019 3300025735 Bacteria 361225
84 Ga0207713_1007082 3300025735 Bacteria 6712
85 Ga0207682_10007991 3300025893 Bacteria 4200
86 Ga0207642_10001432 3300025899 Bacteria 7404
87 Ga0207688_10011818 3300025901 Bacteria 4751
88 Ga0207652_10004983 3300025921 Bacteria 10754
89 Ga0207646_10142309 3300025922 Bacteria 2161
90 Ga0207687_10093600 3300025927 Bacteria 2197
91 Ga0207644_10009518 3300025931 Bacteria 6383
92 Ga0207709_10013771 3300025935 Bacteria 4463
93 Ga0207709_10015856 3300025935 Bacteria 4183
94 Ga0207669_10003300 3300025937 Bacteria 6980
95 Ga0207704_10036123 3300025938 Bacteria 2840
96 Ga0207704_10145807 3300025938 Bacteria 1663
97 Ga0207679_10084198 3300025945 Bacteria 2440
98 Ga0207651_10008198 3300025960 Bacteria 5626
99 Ga0207658_10126331 3300025986 Bacteria 2047
100 Ga0207703_10020202 3300026035 Bacteria 5208
101 Ga0207708_10034415 3300026075 Bacteria 3854
102 Ga0207648_10018630 3300026089 Bacteria 6281
103 Ga0207648_10023642 3300026089 Bacteria 5502
104 Ga0207648_10082483 3300026089 Bacteria 2804
105 Ga0207674_10000119 3300026116 Bacteria 91959
106 Ga0207683_10058165 3300026121 Bacteria 3394
107 Ga0209281_1000022 3300027111 Bacteria 522913
108 Ga0209281_1000025 3300027111 Bacteria 488275
109 Ga0209281_1000100 3300027111 Bacteria 223560
110 Ga0209281_1000281 3300027111 Bacteria 96061
111 Ga0209281_1000558 3300027111 Bacteria 45216
112 Ga0209281_1000723 3300027111 Bacteria 32737
113 Ga0209281_1001663 3300027111 Bacteria 11784
114 Ga0209281_1003164 3300027111 Bacteria 5687
115 Ga0209371_1000013 3300027312 Bacteria 691516
116 Ga0209371_1002811 3300027312 Bacteria 9261
117 Ga0207428_10010127 3300027907 Bacteria 8431
118 Ga0207428_10026941 3300027907 Bacteria 4789
119 Ga0207428_10083366 3300027907 Bacteria 2494
120 Ga0268266_10000142 3300028379 Bacteria 138183
121 Ga0268266_10139307 3300028379 Bacteria 2176
122 Ga0268265_10161482 3300028380 Bacteria 1904
123 Ga0268256_1000014 3300030500 Bacteria 691435
124 Ga0268256_1002513 3300030500 Bacteria 9261
125 Ga0265332_10000913 3300031238 Bacteria 17744
126 Ga0265316_10005526 3300031344 Bacteria 12259
127 Ga0307509_10000032 3300031507 Bacteria 202919
128 Ga0307410_10012323 3300031852 Bacteria 4940
129 Ga0395900_0153363 3300037418 Bacteria 2353
130 Ga0395901_0026051 3300038443 Bacteria 6004
131 Ga0395901_0111200 3300038443 Bacteria 2877
132 Ga0439438_004746 3300041405 Bacteria 5140
133 Ga0439432_032091 3300042006 Bacteria 1695
134 Ga0439452_000079 3300042010 Bacteria 83084
135 Ga0439452_000731 3300042010 Bacteria 15869
136 Ga0450902_003589 3300042137 Bacteria 2277
137 Ga0439464_0000620 3300042439 Bacteria 7523
138 Ga0466981_0000037 3300044669 Bacteria 57869
139 Ga0453684_0002506 3300044712 Bacteria 44322
140 Ga0453684_0063096 3300044712 Bacteria 4742
141 Ga0453684_0137846 3300044712 Bacteria 2918
142 Ga0451576_0230659 3300045051 Bacteria 1934
143 Ga0495617_002059 3300046452 Bacteria 8342
144 Ga0495591_000090 3300046458 Bacteria 101695
145 Ga0495651_0090283 3300046462 Bacteria 2298
146 Ga0495650_0000040 3300046471 Bacteria 366254
147 Ga0495662_0007636 3300046476 Bacteria 5336
148 Ga0495664_0005541 3300046477 Bacteria 6936
149 Ga0495585_0000183 3300046492 Bacteria 66586
150 Ga0495594_0001331 3300046499 Bacteria 12845
151 Ga0495610_0005002 3300046512 Bacteria 9594
152 Ga0495616_0004235 3300046513 Bacteria 9075
153 Ga0495643_0000125 3300046522 Bacteria 124041
154 Ga0495648_0000030 3300046524 Bacteria 216178
155 Ga0495666_0008027 3300046526 Bacteria 5288
156 Ga0495652_0009397 3300046529 Bacteria 8888
157 Ga0495654_0037189 3300046530 Bacteria 2443
158 Ga0495586_0012344 3300046535 Bacteria 4532
159 Ga0495597_0000719 3300046542 Bacteria 26473
160 Ga0495667_0022315 3300046559 Bacteria 4265
161 Ga0495668_0003925 3300046616 Bacteria 10863
162 Ga0495634_0008699 3300046642 Bacteria 7530
163 Ga0495625_0004454 3300046660 Bacteria 13237
164 Ga0495635_0017659 3300046663 Bacteria 4983
165 Ga0495599_0032271 3300046678 Bacteria 3288
166 Ga0495646_0006928 3300046680 Bacteria 7195
167 Ga0495613_0005992 3300046689 Bacteria 9099
168 Ga0495600_0002646 3300046809 Bacteria 10339
169 Ga0495581_0040591 3300047315 Bacteria 2692
170 Ga0495604_0003752 3300047317 Bacteria 12097
171 Ga0495674_0007158 3300047319 Bacteria 10670
172 Ga0495676_0000317 3300047321 Bacteria 39240
173 Ga0495680_0049924 3300047322 Bacteria 3274
174 Ga0495673_0000117 3300047469 Bacteria 148662
175 Ga0495684_0062722 3300047471 Bacteria 2827
176 Ga0495614_0024767 3300048089 Bacteria 2590
177 Ga0496101_0009029 3300048904 Bacteria 6538
178 Ga0496104_0000362 3300048907 Bacteria 40358
179 Ga0496105_0025763 3300048908 Bacteria 4791
180 Ga0496105_0091650 3300048908 Bacteria 2510
181 Ga0496116_0007505 3300048919 Bacteria 9652
182 Ga0496116_0031757 3300048919 Bacteria 3774
183 Ga0496117_0002768 3300048920 Bacteria 21472
184 Ga0496117_0012210 3300048920 Bacteria 7597
185 Ga0496117_0039530 3300048920 Bacteria 3480
186 Ga0496117_0045747 3300048920 Bacteria 3156
187 Ga0496118_0002823 3300048921 Bacteria 22726
188 Ga0496119_0005477 3300048922 Bacteria 12140
189 Ga0496119_0020738 3300048922 Bacteria 4775
190 Ga0496119_0023529 3300048922 Bacteria 4363
191 Ga0496119_0023786 3300048922 Bacteria 4331
192 Ga0496120_0003145 3300048923 Bacteria 15414
193 Ga0496120_0010370 3300048923 Bacteria 6506
194 Ga0496120_0011837 3300048923 Bacteria 5969
195 Ga0496120_0020170 3300048923 Bacteria 4244
196 Ga0496120_0045105 3300048923 Bacteria 2556
197 Ga0496121_0015346 3300048924 Bacteria 8035
198 Ga0496121_0015959 3300048924 Bacteria 7792
199 Ga0496121_0017007 3300048924 Bacteria 7463
200 Ga0496121_0017507 3300048924 Bacteria 7313
201 Ga0496122_0000392 3300048925 Bacteria 93045
202 Ga0496122_0000897 3300048925 Bacteria 55017
203 Ga0496122_0024452 3300048925 Bacteria 5285
204 Ga0496122_0027225 3300048925 Bacteria 4894
205 Ga0496123_0000915 3300048926 Bacteria 46316
206 Ga0496123_0001554 3300048926 Bacteria 31553
207 Ga0496123_0010554 3300048926 Bacteria 8143
208 Ga0496124_0010697 3300048927 Bacteria 9255
209 Ga0496124_0015650 3300048927 Bacteria 7259
210 Ga0496124_0051518 3300048927 Bacteria 3502
211 Ga0496125_0014357 3300048928 Bacteria 7717
212 Ga0496125_0015732 3300048928 Bacteria 7294
213 Ga0496126_0009222 3300048929 Bacteria 10524
214 Ga0496126_0037166 3300048929 Bacteria 4547
215 Ga0496126_0052024 3300048929 Bacteria 3725
216 Ga0501031_0055119 3300049568 Bacteria 2590
217 Ga0501032_0085307 3300049569 Bacteria 2099
218 Ga0501032_0113011 3300049569 Bacteria 1796
219 Ga0501033_0003097 3300049570 Bacteria 13810
220 Ga0501034_0002688 3300049571 Bacteria 20936
221 Ga0501034_0026358 3300049571 Bacteria 5919
222 Ga0501034_0049250 3300049571 Bacteria 4252
223 Ga0501034_0067968 3300049571 Bacteria 3575
224 Ga0501036_0005483 3300049572 Bacteria 10288
225 Ga0501036_0031530 3300049572 Bacteria 4479
226 Ga0501036_0075446 3300049572 Bacteria 2851
227 Ga0501037_0002833 3300049573 Bacteria 12571
228 Ga0501037_0016317 3300049573 Bacteria 5465
229 Ga0501038_0002468 3300049574 Bacteria 17200
230 Ga0501038_0023345 3300049574 Bacteria 5531
231 Ga0501039_0012379 3300049575 Bacteria 6511
232 Ga0501039_0055868 3300049575 Bacteria 3058
233 Ga0501039_0125179 3300049575 Bacteria 2016
234 Ga0501040_0055407 3300049576 Bacteria 2718
235 Ga0501041_0008240 3300049577 Bacteria 6130
236 Ga0501041_0039452 3300049577 Bacteria 2866
237 Ga0501041_0095773 3300049577 Bacteria 1834
238 Ga0501042_0000783 3300049578 Bacteria 17389
239 Ga0501043_0001882 3300049579 Bacteria 17977
240 Ga0501043_0003939 3300049579 Bacteria 12177
241 Ga0501043_0018414 3300049579 Bacteria 5477
242 Ga0501043_0031730 3300049579 Bacteria 4153
243 Ga0501043_0151565 3300049579 Bacteria 1814
244 Ga0501046_0001610 3300049580 Bacteria 21590
245 Ga0501046_0003259 3300049580 Bacteria 14898
246 Ga0501046_0015534 3300049580 Bacteria 6394
247 Ga0501046_0172343 3300049580 Bacteria 1623
248 Ga0501047_0000683 3300049581 Bacteria 35386
249 Ga0501047_0005452 3300049581 Bacteria 11972
250 Ga0501047_0009097 3300049581 Bacteria 9380
251 Ga0501047_0107294 3300049581 Bacteria 2674
252 Ga0501047_0118182 3300049581 Bacteria 2533
253 Ga0501048_0003266 3300049582 Bacteria 12350
254 Ga0501048_0018891 3300049582 Bacteria 5066
255 Ga0501048_0034411 3300049582 Bacteria 3654
256 Ga0501067_0008745 3300049583 Bacteria 5610
257 Ga0501068_0007302 3300049584 Bacteria 6121
258 Ga0501068_0029525 3300049584 Bacteria 3247
259 Ga0501068_0040619 3300049584 Bacteria 2793
260 Ga0501069_0012952 3300049585 Bacteria 4441
261 Ga0501070_0022075 3300049586 Bacteria 5331
262 Ga0501070_0038209 3300049586 Bacteria 4006
263 Ga0501071_0006797 3300049587 Bacteria 7450
264 Ga0501071_0020434 3300049587 Bacteria 4601
265 Ga0501071_0055874 3300049587 Bacteria 2850
266 Ga0501072_0001008 3300049588 Bacteria 20833
267 Ga0501072_0003685 3300049588 Bacteria 11559
268 Ga0501073_0006238 3300049589 Bacteria 8894
269 Ga0501073_0115815 3300049589 Bacteria 1857
270 Ga0501074_0028551 3300049590 Bacteria 4043
271 Ga0501075_0003876 3300049591 Bacteria 10077
272 Ga0501076_0000776 3300049592 Bacteria 20632
273 Ga0501077_0000139 3300049593 Bacteria 39525
274 Ga0501079_0000934 3300049741 Bacteria 20092
275 Ga0501079_0007044 3300049741 Bacteria 8483
276 Ga0501080_0006509 3300049742 Bacteria 10490
277 Ga0501080_0067031 3300049742 Bacteria 3338
278 Ga0501081_0003574 3300049743 Bacteria 9937
279 Ga0501081_0045534 3300049743 Bacteria 3012
280 Ga0501083_0004968 3300049744 Bacteria 9424
281 Ga0501083_0007977 3300049744 Bacteria 7497
282 Ga0501083_0018119 3300049744 Bacteria 4908
283 Ga0501083_0019081 3300049744 Bacteria 4774
284 Ga0501035_0003222 3300049822 Bacteria 15634
285 Ga0501035_0003319 3300049822 Bacteria 15418
286 Ga0501035_0039127 3300049822 Bacteria 4292
287 Ga0501035_0190368 3300049822 Bacteria 1764
288 Ga0501044_0000893 3300049823 Bacteria 36023
289 Ga0501044_0002842 3300049823 Bacteria 19709
290 Ga0501044_0130264 3300049823 Bacteria 2510
291 Ga0501045_0000766 3300049824 Bacteria 20598
292 Ga0501045_0004729 3300049824 Bacteria 9393
293 nmdc:mga00v17_3532_c1 3300050491 Bacteria 8077
294 nmdc:mga0k408_4086_c1 3300050493 Bacteria 6754
295 nmdc:mga05p37_136659_c1 3300050507 Bacteria 3005
296 nmdc:mga08y16_123113_c1 3300050511 Bacteria 2698
297 nmdc:mga08y16_23282_c1 3300050511 Bacteria 6541
298 nmdc:mga08y16_39521_c1 3300050511 Bacteria 4950
299 nmdc:mga0rr50_79601_c1 3300050513 Bacteria 2524
300 Ga0500651_0031624 3300053093 Bacteria 3332
301 Ga0500595_000007 3300053119 Bacteria 289461
302 Ga0500616_0000001 3300053153 Bacteria 1986011
303 Ga0500645_000469 3300053730 Bacteria 27530
304 Ga0501084_0000367 3300054114 Bacteria 34504
305 Ga0501084_0060551 3300054114 Bacteria 3169
306 Ga0501082_0004282 3300060353 Bacteria 12483
307 Ga0501082_0011839 3300060353 Bacteria 7498
308 Ga0501082_0073973 3300060353 Bacteria 2934
309 Ga0530510_0000945 3300061734 Bacteria 19157
310 Ga0530510_0013345 3300061734 Bacteria 5776
311 2526212427 2526164512 Bacteria 4025691
312 2548651303 2547132416 Bacteria 4633861
313 2574429284 2574179768 Bacteria 4907129
314 2603644367 2602042047 Bacteria 4697674
315 2603701108 2602042066 Bacteria 4423871
316 2603704974 2602042067 Bacteria 4863713
317 2671104507 2667528172 Bacteria 5170840
318 2671589415 2671180115 Bacteria 5353919
319 2681998131 2681812866 Bacteria 4552357
320 2682008251 2681812869 Bacteria 5014465
321 2722883946 2721755523 Bacteria 6430384
322 2753857762 2751185917 Bacteria 4551186
323 2765590878 2765235842 Bacteria 4799256
324 2775540445 2775506706 Bacteria 4873073
325 2821120761 2821118458 Bacteria 4714306
326 2823376639 2823373977 Bacteria 4779415
327 2839140281 2839138175 Bacteria 6549354
328 2844429252 2844425489 Bacteria 4854065
329 2884090685 2884086401 Bacteria 5005459
330 2891675579 2891670763 Bacteria 4967099
331 2919543998 2919543075 Bacteria 4728703
332 2923529027 2923525760 Bacteria 4472324
333 2923636769 2923634449 Bacteria 4753480
334 2927836770 2927833300 Bacteria 4923934
335 2937544150 2937539931 Bacteria 4639830
336 2939572455 2939568625 Bacteria 4542555
337 2939610595 2939607340 Bacteria 4719256
338 2939645664 2939642701 Bacteria 4475280
339 2974314893 2974310843 Bacteria 4947816
340 639785688 639633007 Bacteria 4376040
341 8018222865 8018221730 Bacteria 4616064
342 8018407117 8018405270 Bacteria 4978981
343 8055101758 8055097453 Bacteria 4865496
344 Ga0453684_0010162
345 SwRhRL2b_contig_511679
346 Ga0058692_1002680
347 Ga0058692_1002688
348 Ga0065704_10002257
349 Ga0065704_10002959
350 Ga0065704_10072945
351 Ga0065704_10083885
352 Ga0065704_10097605
353 Ga0070674_100011255
354 Ga0070688_100005891
355 Ga0070688_100040562
356 Ga0070659_100207978
357 Ga0070701_10021430
358 Ga0070698_100023772
359 Ga0070684_100031077
360 Ga0070665_100000664
361 Ga0070665_100047714
362 Ga0070704_100023263
363 Ga0070704_100035957
364 Ga0068857_100000020
365 Ga0068852_100134721
366 Ga0068866_10001027
367 Ga0068851_10004630
368 Ga0068870_10039753
369 Ga0068860_100146998
370 Ga0081539_10042277
371 Ga0075364_10029125
372 Ga0075364_10047151
373 Ga0075366_10000327
374 Ga0075366_10005716
375 Ga0075431_100103390
376 Ga0068865_100083705
377 Ga0079104_1000496
378 Ga0079104_1000660
379 Ga0079104_1001871
380 Ga0079104_1002970
381 Ga0079104_1004618
382 Ga0079104_1005364
383 Ga0105251_10002659
384 Ga0105251_10004402
385 Ga0105251_10009214
386 Ga0105244_10000422
387 Ga0105244_10001144
388 Ga0105244_10009347
389 Ga0105244_10009606
390 Ga0105250_10000674
391 Ga0105250_10006521
392 Ga0105240_10275010
393 Ga0111539_10158974
394 Ga0111539_10223189
395 Ga0105245_10038729
396 Ga0114129_10018558
397 Ga0105243_10010470
398 Ga0105243_10085223
399 Ga0105242_10044071
400 Ga0105248_10145416
401 Ga0105246_10014419
402 Ga0157373_10094177
403 Ga0157371_10023066
404 Ga0157371_10037770
405 Ga0157370_10008700
406 Ga0157378_10013671
407 Ga0163162_10159154
408 Ga0157380_10030428
409 Ga0157380_10054573
410 Ga0157379_10053427
411 Ga0183366_1002
412 Ga0183370_1002
413 Ga0183369_1002
414 Ga0183368_1005
415 Ga0163161_10086040
416 Ga0213876_10019084
417 Ga0209148_1000488
418 Ga0209455_1002001
419 Ga0207697_10006337
420 Ga0207696_1001078
421 Ga0207655_1000065
422 Ga0207655_1000640
423 Ga0207655_1000966
424 Ga0207655_1006918
425 Ga0207655_1010980
426 Ga0207713_1000019
427 Ga0207713_1007082
428 Ga0207682_10007991
429 Ga0207642_10001432
430 Ga0207688_10011818
431 Ga0207652_10004983
432 Ga0207646_10142309
433 Ga0207687_10093600
434 Ga0207644_10009518
435 Ga0207709_10013771
436 Ga0207709_10015856
437 Ga0207669_10003300
438 Ga0207704_10036123
439 Ga0207704_10145807
440 Ga0207679_10084198
441 Ga0207651_10008198
442 Ga0207658_10126331
443 Ga0207703_10020202
444 Ga0207708_10034415
445 Ga0207648_10018630
446 Ga0207648_10023642
447 Ga0207648_10082483
448 Ga0207674_10000119
449 Ga0207683_10058165
450 Ga0209281_1000022
451 Ga0209281_1000025
452 Ga0209281_1000100
453 Ga0209281_1000281
454 Ga0209281_1000558
455 Ga0209281_1000723
456 Ga0209281_1001663
457 Ga0209281_1003164
458 Ga0209371_1000013
459 Ga0209371_1002811
460 Ga0207428_10010127
461 Ga0207428_10026941
462 Ga0207428_10083366
463 Ga0268266_10000142
464 Ga0268266_10139307
465 Ga0268265_10161482
466 Ga0268256_1000014
467 Ga0268256_1002513
468 Ga0265332_10000913
469 Ga0265316_10005526
470 Ga0307509_10000032
471 Ga0307410_10012323
472 Ga0395900_0153363
473 Ga0395901_0026051
474 Ga0395901_0111200
475 Ga0439438_004746
476 Ga0439432_032091
477 Ga0439452_000079
478 Ga0439452_000731
479 Ga0450902_003589
480 Ga0439464_0000620
481 Ga0466981_0000037
482 Ga0453684_0002506
483 Ga0453684_0063096
484 Ga0453684_0137846
485 Ga0451576_0230659
486 Ga0495617_002059
487 Ga0495591_000090
488 Ga0495651_0090283
489 Ga0495650_0000040
490 Ga0495662_0007636
491 Ga0495664_0005541
492 Ga0495585_0000183
493 Ga0495594_0001331
494 Ga0495610_0005002
495 Ga0495616_0004235
496 Ga0495643_0000125
497 Ga0495648_0000030
498 Ga0495666_0008027
499 Ga0495652_0009397
500 Ga0495654_0037189
501 Ga0495586_0012344
502 Ga0495597_0000719
503 Ga0495667_0022315
504 Ga0495668_0003925
505 Ga0495634_0008699
506 Ga0495625_0004454
507 Ga0495635_0017659
508 Ga0495599_0032271
509 Ga0495646_0006928
510 Ga0495613_0005992
511 Ga0495600_0002646
512 Ga0495581_0040591
513 Ga0495604_0003752
514 Ga0495674_0007158
515 Ga0495676_0000317
516 Ga0495680_0049924
517 Ga0495673_0000117
518 Ga0495684_0062722
519 Ga0495614_0024767
520 Ga0496101_0009029
521 Ga0496104_0000362
522 Ga0496105_0025763
523 Ga0496105_0091650
524 Ga0496116_0007505
525 Ga0496116_0031757
526 Ga0496117_0002768
527 Ga0496117_0012210
528 Ga0496117_0039530
529 Ga0496117_0045747
530 Ga0496118_0002823
531 Ga0496119_0005477
532 Ga0496119_0020738
533 Ga0496119_0023529
534 Ga0496119_0023786
535 Ga0496120_0003145
536 Ga0496120_0010370
537 Ga0496120_0011837
538 Ga0496120_0020170
539 Ga0496120_0045105
540 Ga0496121_0015346
541 Ga0496121_0015959
542 Ga0496121_0017007
543 Ga0496121_0017507
544 Ga0496122_0000392
545 Ga0496122_0000897
546 Ga0496122_0024452
547 Ga0496122_0027225
548 Ga0496123_0000915
549 Ga0496123_0001554
550 Ga0496123_0010554
551 Ga0496124_0010697
552 Ga0496124_0015650
553 Ga0496124_0051518
554 Ga0496125_0014357
555 Ga0496125_0015732
556 Ga0496126_0009222
557 Ga0496126_0037166
558 Ga0496126_0052024
559 Ga0501031_0055119
560 Ga0501032_0085307
561 Ga0501032_0113011
562 Ga0501033_0003097
563 Ga0501034_0002688
564 Ga0501034_0026358
565 Ga0501034_0049250
566 Ga0501034_0067968
567 Ga0501036_0005483
568 Ga0501036_0031530
569 Ga0501036_0075446
570 Ga0501037_0002833
571 Ga0501037_0016317
572 Ga0501038_0002468
573 Ga0501038_0023345
574 Ga0501039_0012379
575 Ga0501039_0055868
576 Ga0501039_0125179
577 Ga0501040_0055407
578 Ga0501041_0008240
579 Ga0501041_0039452
580 Ga0501041_0095773
581 Ga0501042_0000783
582 Ga0501043_0001882
583 Ga0501043_0003939
584 Ga0501043_0018414
585 Ga0501043_0031730
586 Ga0501043_0151565
587 Ga0501046_0001610
588 Ga0501046_0003259
589 Ga0501046_0015534
590 Ga0501046_0172343
591 Ga0501047_0000683
592 Ga0501047_0005452
593 Ga0501047_0009097
594 Ga0501047_0107294
595 Ga0501047_0118182
596 Ga0501048_0003266
597 Ga0501048_0018891
598 Ga0501048_0034411
599 Ga0501067_0008745
600 Ga0501068_0007302
601 Ga0501068_0029525
602 Ga0501068_0040619
603 Ga0501069_0012952
604 Ga0501070_0022075
605 Ga0501070_0038209
606 Ga0501071_0006797
607 Ga0501071_0020434
608 Ga0501071_0055874
609 Ga0501072_0001008
610 Ga0501072_0003685
611 Ga0501073_0006238
612 Ga0501073_0115815
613 Ga0501074_0028551
614 Ga0501075_0003876
615 Ga0501076_0000776
616 Ga0501077_0000139
617 Ga0501079_0000934
618 Ga0501079_0007044
619 Ga0501080_0006509
620 Ga0501080_0067031
621 Ga0501081_0003574
622 Ga0501081_0045534
623 Ga0501083_0004968
624 Ga0501083_0007977
625 Ga0501083_0018119
626 Ga0501083_0019081
627 Ga0501035_0003222
628 Ga0501035_0003319
629 Ga0501035_0039127
630 Ga0501035_0190368
631 Ga0501044_0000893
632 Ga0501044_0002842
633 Ga0501044_0130264
634 Ga0501045_0000766
635 Ga0501045_0004729
636 nmdc:mga00v17_3532_c1
637 nmdc:mga0k408_4086_c1
638 nmdc:mga05p37_136659_c1
639 nmdc:mga08y16_123113_c1
640 nmdc:mga08y16_23282_c1
641 nmdc:mga08y16_39521_c1
642 nmdc:mga0rr50_79601_c1
643 Ga0500651_0031624
644 Ga0500595_000007
645 Ga0500616_0000001
646 Ga0500645_000469
647 Ga0501084_0000367
648 Ga0501084_0060551
649 Ga0501082_0004282
650 Ga0501082_0011839
651 Ga0501082_0073973
652 Ga0530510_0000945
653 Ga0530510_0013345
654 2526212427
655 2548651303
656 2574429284
657 2603644367
658 2603701108
659 2603704974
660 2671104507
661 2671589415
662 2681998131
663 2682008251
664 2722883946
665 2753857762
666 2765590878
667 2775540445
668 2821120761
669 2823376639
670 2839140281
671 2844429252
672 2884090685
673 2891675579
674 2919543998
675 2923529027
676 2923636769
677 2927836770
678 2937544150
679 2939572455
680 2939610595
681 2939645664
682 2974314893
683 639785688
684 8018222865
685 8018407117
686 8055101758

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05872

HerA_C

Helicase HerA-like C-terminal

102

552

0.96

PF01935

DUF87

Helicase HerA, central domain

109

327

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fs4-assembly1.cif.gz_E structure of s. cerevisiae rad24-rfc loading the 9-1-1 clamp onto a 10-nt gapped dna in step 2 (open 9-1-1 ring and flexibly bound chamber dna) 0.7067 235 320
7stb-assembly1.cif.gz_E closed state of rad24-rfc:9-1-1 bound to a 5' ss/dsdna junction 0.6741 230 320
7wrw-assembly1.cif.gz_B structure of deinococcus radiodurans hera 0.6716 4 387
1sxj-assembly1.cif.gz_D crystal structure of the eukaryotic clamp loader (replication factor c, rfc) bound to the dna sliding clamp (proliferating cell nuclear antigen, pcna) 0.6685 262 320
4d2i-assembly1.cif.gz_A crystal structure of the hera hexameric dna translocase from sulfolobus solfataricus bound to amp-pnp 0.6649 5 393
ID Description Score Start End Superfamily
af_P39342_201_381_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9923 201 381 3.40.50.300
af_P39342_201_381_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9869 201 381 3.40.50.300
af_I6Y0X6_221_415_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9613 190 383 3.40.50.300
af_I6Y0X6_221_415_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9517 190 383 3.40.50.300
af_F4KEM0_335_511_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7452 258 320 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A3S4E0R5-F1-model_v4 deleted 0.9967 1 388
AF-A0A376X4F2-F1-model_v4 ATPase 0.9941 1 414
AF-A0A2M7N7U8-F1-model_v4 ATP-binding protein 0.9904 1 389 GO:0005524
AF-A0A1E4I0S1-F1-model_v4 ATP-binding protein 0.9902 1 422 GO:0005524
AF-A0A376YHC0-F1-model_v4 ATPase 0.9895 22 329

Map