F415899

General Info

Members Datasets Scaffolds Average Seq Length
344 201 245 323

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10030595|Ga0081455_100305955
Length 359
Sequence MGSPPRRVNVAGLRPLPGGTHWVRVAGTFHVEPPPMTLRLAAVLAAGLMLVPAAQAQTYPSKTVTVVVPFPAGGSTDWLSRLLGQKLEQRLKQPFIVENRAGGANVIAATAVAKAEPDGHTLLMTTSTTMAINVSVFKSLPYDPEKDFAPVGLVSGVPFILVVNAALPVRSIADLVQFAKGKPGGLDYASTGPGSAANLFAVLLKNALGDIAMTPIPYKGNAPGLQDVVAGHVSVMFSDLLSALPLIETGKLRALGVSTSKRSAAAPHIPTLAEAGVRGYDASAWQMIVAPAKTPAAIVGKLNAELHAIVSEEAVNRDINGRGHIAIATPPPAELKTFVRSEIARWGKVVDEAGARGTE

Samples

Sample ID Description Type Environment
1 2834641062 Cupriavidus gilardii JZ4 Isolate Unclassified
2 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
3 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
4 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
5 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
6 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
29 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
32 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
74 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
75 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
77 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
81 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
82 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
83 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
87 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
88 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
93 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
94 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
95 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
106 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
107 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
108 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
109 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
110 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
117 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
118 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
119 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
120 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
121 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
122 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
123 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
124 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
128 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
133 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
134 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
135 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
136 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
137 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
138 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
139 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
144 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
145 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
146 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
147 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
148 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
155 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
159 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
160 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
168 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
171 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
172 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
175 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
179 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
180 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
189 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
190 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
191 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
192 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
193 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
194 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
195 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
196 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
197 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
198 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
200 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
201 8003400568 Cupriavidus gilardii USM5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.97
Metatranscriptomes 0.58
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.92
Nodule 0.29
Rhizoplane 3.78
Rhizosphere 81.4
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1004575 3300003781 Bacteria 7021
2 Ga0055540_1000317 3300003792 Bacteria 42737
3 Ga0070683_100314677 3300005329 Bacteria 1490
4 Ga0070674_100008640 3300005356 Bacteria 6071
5 Ga0070688_100053439 3300005365 Bacteria 2527
6 Ga0070709_10038932 3300005434 Bacteria 2915
7 Ga0070714_100030446 3300005435 Bacteria 4492
8 Ga0070713_100126411 3300005436 Bacteria 2249
9 Ga0070713_100183702 3300005436 Bacteria 1880
10 Ga0070710_10010720 3300005437 Bacteria 4507
11 Ga0070711_100386519 3300005439 Bacteria 1133
12 Ga0070705_100141072 3300005440 Bacteria 1586
13 Ga0070681_10026992 3300005458 Bacteria 5774
14 Ga0070706_100019744 3300005467 Bacteria 6216
15 Ga0070706_100280381 3300005467 Bacteria 1555
16 Ga0070707_100134584 3300005468 Bacteria 2404
17 Ga0070698_100209483 3300005471 Bacteria 1884
18 Ga0070698_100430357 3300005471 Bacteria 1254
19 Ga0070699_100023456 3300005518 Bacteria 5315
20 Ga0070672_100185100 3300005543 Bacteria 1737
21 Ga0070696_100016680 3300005546 Bacteria 4952
22 Ga0070665_100179486 3300005548 Bacteria 2118
23 Ga0081455_10030595 3300005937 Bacteria 4888
24 Ga0081455_10075867 3300005937 Bacteria 2772
25 Ga0081455_10114840 3300005937 Bacteria 2132
26 Ga0081540_1000245 3300005983 Bacteria 56994
27 Ga0081540_1005856 3300005983 Bacteria 9091
28 Ga0081539_10053326 3300005985 Bacteria 2264
29 Ga0070717_10067509 3300006028 Bacteria 2975
30 Ga0070717_10444649 3300006028 Bacteria 1168
31 Ga0075365_10283229 3300006038 Bacteria 1166
32 Ga0075368_10020155 3300006042 Bacteria 2522
33 Ga0075363_100005502 3300006048 Bacteria 5645
34 Ga0075363_100016859 3300006048 Bacteria 3613
35 Ga0075432_10035890 3300006058 Bacteria 1722
36 Ga0070715_10023948 3300006163 Bacteria 2398
37 Ga0070716_100171586 3300006173 Bacteria 1416
38 Ga0070712_100319145 3300006175 Bacteria 1263
39 Ga0075362_10011911 3300006177 Bacteria 3437
40 Ga0075362_10057893 3300006177 Bacteria 1747
41 Ga0075362_10058565 3300006177 Bacteria 1737
42 Ga0075367_10064105 3300006178 Bacteria 2197
43 Ga0075369_10043091 3300006186 Bacteria 1935
44 Ga0075366_10002115 3300006195 Bacteria 10108
45 Ga0075366_10007568 3300006195 Bacteria 6007
46 Ga0075366_10008910 3300006195 Bacteria 5591
47 Ga0075366_10027285 3300006195 Bacteria 3349
48 Ga0075366_10132054 3300006195 Bacteria 1507
49 Ga0075370_10000192 3300006353 Bacteria 21647
50 Ga0075370_10012460 3300006353 Bacteria 4494
51 Ga0075370_10132040 3300006353 Bacteria 1457
52 Ga0068871_100136659 3300006358 Bacteria 2082
53 Ga0075428_100142813 3300006844 Bacteria 2602
54 Ga0075428_100169488 3300006844 Bacteria 2367
55 Ga0075430_100000492 3300006846 Bacteria 29679
56 Ga0075430_100000975 3300006846 Bacteria 22553
57 Ga0075430_100055298 3300006846 Bacteria 3337
58 Ga0075433_10042593 3300006852 Bacteria 3940
59 Ga0075433_10214864 3300006852 Bacteria 1709
60 Ga0075434_100004809 3300006871 Bacteria 12234
61 Ga0075434_100433676 3300006871 Bacteria 1335
62 Ga0075429_100088567 3300006880 Bacteria 2698
63 Ga0075436_100372878 3300006914 Unclassified 1031
64 Ga0075435_100055659 3300007076 Bacteria 3195
65 Ga0075435_100195794 3300007076 Bacteria 1711
66 Ga0099794_10063532 3300007265 Bacteria 1797
67 Ga0099795_10011965 3300007788 Bacteria 2615
68 Ga0111539_10040312 3300009094 Bacteria 5623
69 Ga0114129_10161671 3300009147 Bacteria 3058
70 Ga0114129_10323449 3300009147 Bacteria 2050
71 Ga0114129_10439602 3300009147 Bacteria 1712
72 Ga0105243_10285558 3300009148 Bacteria 1488
73 Ga0099796_10019171 3300010159 Bacteria 2069
74 Ga0157378_10121446 3300013297 Bacteria 2408
75 Ga0157380_10078258 3300014326 Bacteria 2697
76 Ga0209676_1000302 3300025292 Bacteria 99000
77 Ga0209051_1000101 3300025303 Bacteria 163793
78 Ga0209257_1004795 3300025304 Bacteria 10076
79 Ga0207699_10013602 3300025906 Bacteria 4172
80 Ga0207645_10338321 3300025907 Bacteria 1006
81 Ga0207684_10041126 3300025910 Bacteria 3921
82 Ga0207684_10108669 3300025910 Bacteria 2373
83 Ga0207707_10048563 3300025912 Unclassified 3697
84 Ga0207646_10209555 3300025922 Bacteria 1760
85 Ga0207700_10132847 3300025928 Bacteria 2035
86 Ga0207664_10326756 3300025929 Bacteria 1354
87 Ga0207709_10065695 3300025935 Bacteria 2282
88 Ga0207669_10182916 3300025937 Bacteria 1504
89 Ga0207665_10002893 3300025939 Bacteria 11522
90 Ga0207665_10168998 3300025939 Unclassified 1578
91 Ga0207691_10161058 3300025940 Bacteria 1969
92 Ga0207428_10131840 3300027907 Bacteria 1912
93 Ga0268266_10059669 3300028379 Bacteria 3287
94 Ga0307515_10000322 3300028794 Bacteria 118563
95 Ga0307511_10000017 3300030521 Bacteria 123976
96 Ga0265763_1000094 3300030763 Bacteria 3992
97 Ga0265760_10020184 3300031090 Bacteria 1923
98 Ga0265325_10007742 3300031241 Bacteria 6400
99 Ga0265339_10000085 3300031249 Bacteria 79483
100 Ga0307513_10122520 3300031456 Bacteria 2564
101 Ga0307513_10281803 3300031456 Bacteria 1439
102 Ga0265313_10000505 3300031595 Bacteria 40966
103 Ga0307514_10006603 3300031649 Bacteria 10068
104 Ga0307516_10052137 3300031730 Unclassified 4007
105 Ga0373926_0017148 3300035083 Bacteria 2484
106 Ga0373926_0049084 3300035083 Bacteria 1519
107 Ga0373923_0024221 3300035111 Bacteria 2395
108 Ga0373936_0002264 3300035113 Bacteria 7195
109 Ga0373945_0002816 3300035116 Bacteria 5461
110 Ga0373953_0001439 3300035117 Bacteria 6894
111 Ga0373954_0045353 3300035118 Bacteria 2054
112 Ga0373957_0001450 3300035120 Bacteria 6429
113 Ga0373943_0012791 3300035170 Bacteria 3783
114 Ga0373946_0002351 3300035171 Bacteria 6684
115 Ga0373946_0033212 3300035171 Bacteria 2076
116 Ga0373955_0000048 3300035172 Bacteria 48012
117 Ga0373961_0023870 3300035241 Bacteria 1649
118 Ga0373924_0003224 3300035410 Bacteria 5582
119 Ga0373931_0021405 3300035691 Bacteria 3244
120 Ga0373935_0000082 3300035692 Bacteria 41509
121 Ga0373927_0005013 3300035695 Bacteria 9170
122 Ga0373933_0003764 3300035724 Bacteria 8382
123 Ga0373947_0000300 3300035725 Bacteria 27875
124 Ga0373937_0000019 3300036401 Bacteria 138568
125 Ga0373925_0000026 3300037068 Bacteria 154713
126 Ga0373925_0084164 3300037068 Bacteria 2424
127 Ga0395905_0069627 3300037471 Bacteria 3296
128 Ga0395901_0112014 3300038443 Bacteria 2866
129 Ga0436365_0552217 3300039437 Bacteria 4627
130 Ga0436365_0828500 3300039437 Bacteria 1593
131 Ga0436361_0856463 3300039447 Bacteria 5221
132 Ga0439436_0012528 3300041404 Bacteria 2573
133 Ga0439465_0022459 3300041413 Bacteria 1982
134 Ga0439442_017316 3300042002 Bacteria 1487
135 Ga0439432_016565 3300042006 Bacteria 2479
136 Ga0450890_005857 3300042127 Bacteria 1581
137 Ga0450890_006285 3300042127 Bacteria 1521
138 Ga0439464_0001530 3300042439 Bacteria 5475
139 Ga0466965_0035685 3300044683 Bacteria 2436
140 Ga0453684_0380689 3300044712 Bacteria 1584
141 Ga0451576_0001137 3300045051 Bacteria 48085
142 Ga0466967_0494802 3300045976 Bacteria 1199
143 Ga0495592_0000017 3300046454 Bacteria 142442
144 Ga0495629_0013099 3300046459 Bacteria 5991
145 Ga0495641_0150989 3300046461 Bacteria 1038
146 Ga0495651_0040884 3300046462 Bacteria 3602
147 Ga0495653_0000033 3300046463 Bacteria 131680
148 Ga0495662_0000527 3300046476 Bacteria 17485
149 Ga0495664_0000008 3300046477 Bacteria 307158
150 Ga0495584_0064135 3300046491 Bacteria 1847
151 Ga0495584_0070938 3300046491 Bacteria 1751
152 Ga0495608_0000014 3300046511 Bacteria 221042
153 Ga0495618_0000027 3300046514 Bacteria 112522
154 Ga0495628_0000008 3300046516 Bacteria 284313
155 Ga0495630_0009577 3300046517 Bacteria 6967
156 Ga0495652_0000005 3300046529 Bacteria 524368
157 Ga0495665_0054522 3300046531 Bacteria 2112
158 Ga0495640_0000017 3300046533 Bacteria 138688
159 Ga0495586_0106250 3300046535 Bacteria 1561
160 Ga0495587_0000005 3300046536 Bacteria 358412
161 Ga0495645_0000007 3300046543 Bacteria 376299
162 Ga0495633_0013016 3300046558 Bacteria 4401
163 Ga0495667_0000012 3300046559 Bacteria 220967
164 Ga0495634_0000843 3300046642 Bacteria 29545
165 Ga0495635_0000010 3300046663 Bacteria 246385
166 Ga0495657_0000108 3300046675 Bacteria 74508
167 Ga0495599_0000015 3300046678 Bacteria 175055
168 Ga0495623_0004942 3300046679 Bacteria 8742
169 Ga0495646_0000066 3300046680 Bacteria 50048
170 Ga0495658_0067467 3300046683 Bacteria 2069
171 Ga0495613_0045644 3300046689 Bacteria 3240
172 Ga0495624_0011125 3300046690 Bacteria 6191
173 Ga0495600_0000128 3300046809 Bacteria 42559
174 Ga0495581_0011643 3300047315 Bacteria 5091
175 Ga0495581_0204252 3300047315 Bacteria 1155
176 Ga0495604_0000001 3300047317 Bacteria 708627
177 Ga0495674_0000012 3300047319 Bacteria 270651
178 Ga0495680_0000409 3300047322 Bacteria 47939
179 Ga0495675_0000152 3300047444 Bacteria 48625
180 Ga0495684_0000022 3300047471 Bacteria 139507
181 Ga0495593_0000416 3300047673 Bacteria 23665
182 Ga0495602_0000106 3300048088 Bacteria 79677
183 Ga0496100_0200558 3300048903 Bacteria 1454
184 Ga0496104_0000840 3300048907 Bacteria 26510
185 Ga0496104_0054957 3300048907 Bacteria 3764
186 Ga0496105_0068641 3300048908 Bacteria 2929
187 Ga0496106_0042952 3300048909 Bacteria 3391
188 Ga0496106_0050740 3300048909 Bacteria 3127
189 Ga0496107_0340298 3300048910 Bacteria 1116
190 Ga0496108_0086393 3300048911 Bacteria 2663
191 Ga0496109_0039549 3300048912 Bacteria 4269
192 Ga0496110_0217538 3300048913 Bacteria 1737
193 Ga0496114_0035325 3300048917 Bacteria 4127
194 Ga0496115_0007456 3300048918 Bacteria 8051
195 Ga0496115_0060377 3300048918 Bacteria 3055
196 Ga0501033_0043928 3300049570 Bacteria 3327
197 Ga0501034_0007534 3300049571 Bacteria 11582
198 Ga0501037_0006067 3300049573 Bacteria 8826
199 Ga0501071_0091248 3300049587 Bacteria 2238
200 Ga0501072_0076823 3300049588 Bacteria 2643
201 Ga0501223_016274 3300049663 Bacteria 1470
202 Ga0501079_0154309 3300049741 Bacteria 1790
203 Ga0501081_0015006 3300049743 Bacteria 5113
204 Ga0501083_0114898 3300049744 Bacteria 1767
205 Ga0501044_0139405 3300049823 Bacteria 2414
206 Ga0501045_0384198 3300049824 Bacteria 1045
207 nmdc:mga03683_47626_c1 3300050489 Bacteria 1779
208 nmdc:mga03683_63227_c1 3300050489 Bacteria 1569
209 nmdc:mga03n38_130903_c1 3300050490 Bacteria 1243
210 nmdc:mga00v17_118024_c1 3300050491 Bacteria 1688
211 nmdc:mga0yw44_136327_c1 3300050492 Bacteria 1593
212 nmdc:mga0yw44_146507_c1 3300050492 Bacteria 1538
213 nmdc:mga0k408_22927_c1 3300050493 Bacteria 3519
214 nmdc:mga0k408_5806_c1 3300050493 Bacteria 6573
215 nmdc:mga06z11_12735_c1 3300050494 Bacteria 3667
216 nmdc:mga06z11_164930_c1 3300050494 Bacteria 1269
217 nmdc:mga04h51_62884_c1 3300050495 Bacteria 1277
218 nmdc:mga07m45_174242_c1 3300050496 Bacteria 1251
219 nmdc:mga05p37_144391_c1 3300050507 Bacteria 2915
220 nmdc:mga05p37_209104_c1 3300050507 Bacteria 2359
221 nmdc:mga09592_240077_c1 3300050508 Bacteria 1570
222 nmdc:mga0qj67_150_c1 3300050509 Bacteria 47345
223 nmdc:mga0qj67_18_c1 3300050509 Bacteria 120268
224 nmdc:mga0qj67_57362_c1 3300050509 Bacteria 3087
225 nmdc:mga08y16_127303_c1 3300050511 Bacteria 2649
226 nmdc:mga0n895_121677_c1 3300050512 Bacteria 2631
227 nmdc:mga0n895_169350_c1 3300050512 Bacteria 2216
228 nmdc:mga0n895_33263_c1 3300050512 Bacteria 4954
229 nmdc:mga0a205_325560_c1 3300050515 Bacteria 1407
230 nmdc:mga0a205_59590_c1 3300050515 Bacteria 3687
231 nmdc:mga0sz30_57746_c1 3300050516 Bacteria 1654
232 Ga0495601_0000011 3300053077 Bacteria 264937
233 Ga0495612_0000006 3300053078 Bacteria 269278
234 Ga0495595_0000021 3300053084 Bacteria 115921
235 Ga0495595_0010571 3300053084 Bacteria 3837
236 Ga0495619_0000013 3300053085 Bacteria 264865
237 Ga0495619_0020778 3300053085 Bacteria 4187
238 Ga0500646_0003747 3300053090 Bacteria 3890
239 Ga0500583_0007778 3300053092 Bacteria 3797
240 Ga0500568_0015368 3300053139 Bacteria 3429
241 Ga0500604_0001915 3300053151 Bacteria 5777
242 Ga0500616_0103302 3300053153 Bacteria 1389
243 Ga0500619_000263 3300053154 Bacteria 11028
244 Ga0501082_0064796 3300060353 Bacteria 3147
245 Ga0530510_0070782 3300061734 Bacteria 2531

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046461 Ga0495641_0150989 Ga0495641_0150989_22_813 261
2 3300048910 Ga0496107_0340298 Ga0496107_0340298_18_842 272
3 3300006038 Ga0075365_10283229 Ga0075365_102832291 288
4 3300038443 Ga0395901_0112014 Ga0395901_0112014_54_929 289
5 3300009094 Ga0111539_10040312 Ga0111539_100403124 297
6 3300050511 nmdc:mga08y16_127303_c1 nmdc:mga08y16_127303_c1_1021_1983 297
7 3300053151 Ga0500604_0001915 Ga0500604_0001915_4848_5759 299
8 3300031456 Ga0307513_10122520 Ga0307513_101225202 304
9 3300025907 Ga0207645_10338321 Ga0207645_103383211 305
10 3300039437 Ga0436365_0552217 Ga0436365_0552217_2615_3715 305
11 3300046491 Ga0495584_0070938 Ga0495584_0070938_70_1044 305
12 3300048907 Ga0496104_0000840 Ga0496104_0000840_1401_2411 305
13 3300048909 Ga0496106_0050740 Ga0496106_0050740_991_2001 305
14 3300048911 Ga0496108_0086393 Ga0496108_0086393_945_1955 305
15 3300006177 Ga0075362_10057893 Ga0075362_100578932 306
16 3300006353 Ga0075370_10132040 Ga0075370_101320401 306
17 3300049587 Ga0501071_0091248 Ga0501071_0091248_42_968 306
18 3300050492 nmdc:mga0yw44_146507_c1 nmdc:mga0yw44_146507_c1_202_1182 306
19 3300050493 nmdc:mga0k408_22927_c1 nmdc:mga0k408_22927_c1_472_1452 306
20 3300006844 Ga0075428_100142813 Ga0075428_1001428131 309
21 3300006846 Ga0075430_100055298 Ga0075430_1000552982 310
22 3300006880 Ga0075429_100088567 Ga0075429_1000885672 310
23 3300050509 nmdc:mga0qj67_57362_c1 nmdc:mga0qj67_57362_c1_2088_3065 310
24 3300053084 Ga0495595_0010571 Ga0495595_0010571_582_1550 311
25 3300006846 Ga0075430_100000975 Ga0075430_10000097521 312
26 3300050509 nmdc:mga0qj67_150_c1 nmdc:mga0qj67_150_c1_31670_32647 312
27 3300005329 Ga0070683_100314677 Ga0070683_1003146772 313
28 3300006195 Ga0075366_10132054 Ga0075366_101320542 313
29 3300006358 Ga0068871_100136659 Ga0068871_1001366592 313
30 3300006852 Ga0075433_10042593 Ga0075433_100425932 313
31 3300006871 Ga0075434_100004809 Ga0075434_1000048098 313
32 3300009148 Ga0105243_10285558 Ga0105243_102855582 313
33 3300010159 Ga0099796_10019171 Ga0099796_100191713 313
34 3300025935 Ga0207709_10065695 Ga0207709_100656952 313
35 3300031730 Ga0307516_10052137 Ga0307516_100521373 313
36 3300035241 Ga0373961_0023870 Ga0373961_0023870_60_1034 313
37 3300035691 Ga0373931_0021405 Ga0373931_0021405_586_1560 313
38 3300037068 Ga0373925_0084164 Ga0373925_0084164_304_1278 313
39 3300045976 Ga0466967_0494802 Ga0466967_0494802_191_1168 313
40 3300048903 Ga0496100_0200558 Ga0496100_0200558_107_1081 313
41 3300048907 Ga0496104_0054957 Ga0496104_0054957_690_1664 313
42 3300048918 Ga0496115_0060377 Ga0496115_0060377_1444_2421 313
43 3300050512 nmdc:mga0n895_33263_c1 nmdc:mga0n895_33263_c1_862_1836 313
44 3300050515 nmdc:mga0a205_59590_c1 nmdc:mga0a205_59590_c1_2663_3637 313
45 3300006042 Ga0075368_10020155 Ga0075368_100201552 314
46 3300006048 Ga0075363_100016859 Ga0075363_1000168592 314
47 3300006177 Ga0075362_10011911 Ga0075362_100119112 314
48 3300006186 Ga0075369_10043091 Ga0075369_100430912 314
49 3300006195 Ga0075366_10027285 Ga0075366_100272854 314
50 3300006353 Ga0075370_10012460 Ga0075370_100124605 314
51 3300045051 Ga0451576_0001137 Ga0451576_0001137_29020_29973 314
52 3300048917 Ga0496114_0035325 Ga0496114_0035325_2671_3651 314
53 3300049570 Ga0501033_0043928 Ga0501033_0043928_510_1469 314
54 3300049571 Ga0501034_0007534 Ga0501034_0007534_5322_6281 314
55 3300049573 Ga0501037_0006067 Ga0501037_0006067_4329_5288 314
56 3300049823 Ga0501044_0139405 Ga0501044_0139405_1009_1968 314
57 3300049824 Ga0501045_0384198 Ga0501045_0384198_15_974 314
58 3300050489 nmdc:mga03683_63227_c1 nmdc:mga03683_63227_c1_284_1258 314
59 3300050491 nmdc:mga00v17_118024_c1 nmdc:mga00v17_118024_c1_486_1460 314
60 3300050492 nmdc:mga0yw44_136327_c1 nmdc:mga0yw44_136327_c1_596_1570 314
61 3300050494 nmdc:mga06z11_164930_c1 nmdc:mga06z11_164930_c1_24_998 314
62 3300050495 nmdc:mga04h51_62884_c1 nmdc:mga04h51_62884_c1_39_1013 314
63 3300050496 nmdc:mga07m45_174242_c1 nmdc:mga07m45_174242_c1_48_1022 314
64 3300050516 nmdc:mga0sz30_57746_c1 nmdc:mga0sz30_57746_c1_536_1510 314
65 3300053085 Ga0495619_0020778 Ga0495619_0020778_1873_2853 314
66 3300005937 Ga0081455_10075867 Ga0081455_100758672 315
67 3300005983 Ga0081540_1000245 Ga0081540_100024513 315
68 3300030521 Ga0307511_10000017 Ga0307511_1000001777 315
69 3300046491 Ga0495584_0064135 Ga0495584_0064135_472_1449 315
70 3300050508 nmdc:mga09592_240077_c1 nmdc:mga09592_240077_c1_130_1107 315
71 3300053090 Ga0500646_0003747 Ga0500646_0003747_2597_3583 315
72 3300053092 Ga0500583_0007778 Ga0500583_0007778_2331_3317 315
73 3300053139 Ga0500568_0015368 Ga0500568_0015368_319_1281 315
74 3300053153 Ga0500616_0103302 Ga0500616_0103302_245_1213 315
75 iso_pu_bacteria 2834641062 2834645147 315
76 iso_pu_bacteria 2932422444 2932424495 315
77 iso_pu_bacteria 8003400568 8003405295 315
78 3300005356 Ga0070674_100008640 Ga0070674_1000086402 316
79 3300005365 Ga0070688_100053439 Ga0070688_1000534391 316
80 3300005440 Ga0070705_100141072 Ga0070705_1001410722 316
81 3300005458 Ga0070681_10026992 Ga0070681_100269922 316
82 3300005467 Ga0070706_100019744 Ga0070706_1000197445 316
83 3300005518 Ga0070699_100023456 Ga0070699_1000234564 316
84 3300005543 Ga0070672_100185100 Ga0070672_1001851002 316
85 3300005546 Ga0070696_100016680 Ga0070696_1000166804 316
86 3300005937 Ga0081455_10030595 Ga0081455_100305955 316
87 3300006846 Ga0075430_100000492 Ga0075430_1000004925 316
88 3300006871 Ga0075434_100433676 Ga0075434_1004336761 316
89 3300006914 Ga0075436_100372878 Ga0075436_1003728781 316
90 3300007788 Ga0099795_10011965 Ga0099795_100119652 316
91 3300009147 Ga0114129_10439602 Ga0114129_104396021 316
92 3300013297 Ga0157378_10121446 Ga0157378_101214462 316
93 3300014326 Ga0157380_10078258 Ga0157380_100782581 316
94 3300025910 Ga0207684_10041126 Ga0207684_100411262 316
95 3300025912 Ga0207707_10048563 Ga0207707_100485633 316
96 3300025937 Ga0207669_10182916 Ga0207669_101829161 316
97 3300025940 Ga0207691_10161058 Ga0207691_101610582 316
98 3300035083 Ga0373926_0049084 Ga0373926_0049084_53_1018 316
99 3300035111 Ga0373923_0024221 Ga0373923_0024221_11_976 316
100 3300035113 Ga0373936_0002264 Ga0373936_0002264_530_1495 316
101 3300035116 Ga0373945_0002816 Ga0373945_0002816_1067_2032 316
102 3300035171 Ga0373946_0002351 Ga0373946_0002351_5028_5993 316
103 3300035172 Ga0373955_0000048 Ga0373955_0000048_7536_8501 316
104 3300035410 Ga0373924_0003224 Ga0373924_0003224_3128_4093 316
105 3300035692 Ga0373935_0000082 Ga0373935_0000082_24864_25829 316
106 3300035695 Ga0373927_0005013 Ga0373927_0005013_2911_3876 316
107 3300035724 Ga0373933_0003764 Ga0373933_0003764_5082_6047 316
108 3300035725 Ga0373947_0000300 Ga0373947_0000300_3508_4473 316
109 3300036401 Ga0373937_0000019 Ga0373937_0000019_20712_21677 316
110 3300037068 Ga0373925_0000026 Ga0373925_0000026_68997_69962 316
111 3300039437 Ga0436365_0828500 Ga0436365_0828500_394_1377 316
112 3300044712 Ga0453684_0380689 Ga0453684_0380689_512_1477 316
113 3300046454 Ga0495592_0000017 Ga0495592_0000017_125562_126527 316
114 3300046462 Ga0495651_0040884 Ga0495651_0040884_2270_3235 316
115 3300046463 Ga0495653_0000033 Ga0495653_0000033_5716_6681 316
116 3300046476 Ga0495662_0000527 Ga0495662_0000527_6760_7725 316
117 3300046477 Ga0495664_0000008 Ga0495664_0000008_68997_69962 316
118 3300046511 Ga0495608_0000014 Ga0495608_0000014_5724_6689 316
119 3300046514 Ga0495618_0000027 Ga0495618_0000027_105834_106799 316
120 3300046516 Ga0495628_0000008 Ga0495628_0000008_68982_69947 316
121 3300046517 Ga0495630_0009577 Ga0495630_0009577_3511_4476 316
122 3300046529 Ga0495652_0000005 Ga0495652_0000005_68997_69962 316
123 3300046533 Ga0495640_0000017 Ga0495640_0000017_117005_117970 316
124 3300046536 Ga0495587_0000005 Ga0495587_0000005_288437_289402 316
125 3300046543 Ga0495645_0000007 Ga0495645_0000007_266583_267548 316
126 3300046559 Ga0495667_0000012 Ga0495667_0000012_214273_215238 316
127 3300046642 Ga0495634_0000843 Ga0495634_0000843_7885_8850 316
128 3300046663 Ga0495635_0000010 Ga0495635_0000010_5750_6715 316
129 3300046675 Ga0495657_0000108 Ga0495657_0000108_5793_6758 316
130 3300046678 Ga0495599_0000015 Ga0495599_0000015_69212_70177 316
131 3300046679 Ga0495623_0004942 Ga0495623_0004942_5726_6691 316
132 3300046680 Ga0495646_0000066 Ga0495646_0000066_20634_21599 316
133 3300046689 Ga0495613_0045644 Ga0495613_0045644_732_1697 316
134 3300046690 Ga0495624_0011125 Ga0495624_0011125_3142_4107 316
135 3300046809 Ga0495600_0000128 Ga0495600_0000128_39407_40372 316
136 3300047315 Ga0495581_0204252 Ga0495581_0204252_71_1036 316
137 3300047317 Ga0495604_0000001 Ga0495604_0000001_214274_215239 316
138 3300047319 Ga0495674_0000012 Ga0495674_0000012_249005_249970 316
139 3300047322 Ga0495680_0000409 Ga0495680_0000409_5721_6686 316
140 3300047444 Ga0495675_0000152 Ga0495675_0000152_45391_46356 316
141 3300047471 Ga0495684_0000022 Ga0495684_0000022_69530_70495 316
142 3300047673 Ga0495593_0000416 Ga0495593_0000416_5722_6687 316
143 3300048088 Ga0495602_0000106 Ga0495602_0000106_5753_6718 316
144 3300048909 Ga0496106_0042952 Ga0496106_0042952_466_1440 316
145 3300050509 nmdc:mga0qj67_18_c1 nmdc:mga0qj67_18_c1_45694_46692 316
146 3300050512 nmdc:mga0n895_121677_c1 nmdc:mga0n895_121677_c1_48_1010 316
147 3300053077 Ga0495601_0000011 Ga0495601_0000011_243288_244253 316
148 3300053078 Ga0495612_0000006 Ga0495612_0000006_42639_43604 316
149 3300053084 Ga0495595_0000021 Ga0495595_0000021_109240_110205 316
150 3300053085 Ga0495619_0000013 Ga0495619_0000013_243209_244174 316
151 3300053154 Ga0500619_000263 Ga0500619_000263_583_1560 316
152 3300005439 Ga0070711_100386519 Ga0070711_1003865191 317
153 3300005548 Ga0070665_100179486 Ga0070665_1001794862 317
154 3300005985 Ga0081539_10053326 Ga0081539_100533261 317
155 3300006173 Ga0070716_100171586 Ga0070716_1001715862 317
156 3300006195 Ga0075366_10008910 Ga0075366_100089103 317
157 3300009147 Ga0114129_10161671 Ga0114129_101616714 317
158 3300025939 Ga0207665_10168998 Ga0207665_101689982 317
159 3300028379 Ga0268266_10059669 Ga0268266_100596693 317
160 3300031649 Ga0307514_10006603 Ga0307514_100066033 317
161 3300035111 Ga0373923_0024221 Ga0373923_0024221_1026_2000 317
162 3300035113 Ga0373936_0002264 Ga0373936_0002264_1545_2519 317
163 3300035116 Ga0373945_0002816 Ga0373945_0002816_2082_3056 317
164 3300035117 Ga0373953_0001439 Ga0373953_0001439_107_1081 317
165 3300035118 Ga0373954_0045353 Ga0373954_0045353_999_1973 317
166 3300035120 Ga0373957_0001450 Ga0373957_0001450_4478_5452 317
167 3300035170 Ga0373943_0012791 Ga0373943_0012791_2642_3616 317
168 3300035172 Ga0373955_0000048 Ga0373955_0000048_6512_7486 317
169 3300035410 Ga0373924_0003224 Ga0373924_0003224_2104_3078 317
170 3300035692 Ga0373935_0000082 Ga0373935_0000082_25879_26853 317
171 3300035695 Ga0373927_0005013 Ga0373927_0005013_3926_4900 317
172 3300035724 Ga0373933_0003764 Ga0373933_0003764_4058_5032 317
173 3300035725 Ga0373947_0000300 Ga0373947_0000300_2484_3458 317
174 3300036401 Ga0373937_0000019 Ga0373937_0000019_19688_20662 317
175 3300037068 Ga0373925_0000026 Ga0373925_0000026_67973_68947 317
176 3300046454 Ga0495592_0000017 Ga0495592_0000017_126577_127551 317
177 3300046459 Ga0495629_0013099 Ga0495629_0013099_4692_5666 317
178 3300046462 Ga0495651_0040884 Ga0495651_0040884_1246_2220 317
179 3300046463 Ga0495653_0000033 Ga0495653_0000033_4692_5666 317
180 3300046476 Ga0495662_0000527 Ga0495662_0000527_5736_6710 317
181 3300046477 Ga0495664_0000008 Ga0495664_0000008_67973_68947 317
182 3300046511 Ga0495608_0000014 Ga0495608_0000014_4700_5674 317
183 3300046514 Ga0495618_0000027 Ga0495618_0000027_106849_107823 317
184 3300046516 Ga0495628_0000008 Ga0495628_0000008_67958_68932 317
185 3300046517 Ga0495630_0009577 Ga0495630_0009577_4526_5500 317
186 3300046529 Ga0495652_0000005 Ga0495652_0000005_67973_68947 317
187 3300046531 Ga0495665_0054522 Ga0495665_0054522_685_1659 317
188 3300046533 Ga0495640_0000017 Ga0495640_0000017_118020_118994 317
189 3300046536 Ga0495587_0000005 Ga0495587_0000005_289452_290426 317
190 3300046543 Ga0495645_0000007 Ga0495645_0000007_267598_268572 317
191 3300046559 Ga0495667_0000012 Ga0495667_0000012_215288_216262 317
192 3300046642 Ga0495634_0000843 Ga0495634_0000843_8900_9874 317
193 3300046663 Ga0495635_0000010 Ga0495635_0000010_4726_5700 317
194 3300046675 Ga0495657_0000108 Ga0495657_0000108_4769_5743 317
195 3300046678 Ga0495599_0000015 Ga0495599_0000015_68188_69162 317
196 3300046679 Ga0495623_0004942 Ga0495623_0004942_4702_5676 317
197 3300046680 Ga0495646_0000066 Ga0495646_0000066_19610_20584 317
198 3300046689 Ga0495613_0045644 Ga0495613_0045644_1747_2721 317
199 3300046690 Ga0495624_0011125 Ga0495624_0011125_4157_5131 317
200 3300046809 Ga0495600_0000128 Ga0495600_0000128_40422_41396 317
201 3300047317 Ga0495604_0000001 Ga0495604_0000001_215289_216263 317
202 3300047319 Ga0495674_0000012 Ga0495674_0000012_250020_250994 317
203 3300047322 Ga0495680_0000409 Ga0495680_0000409_4697_5671 317
204 3300047444 Ga0495675_0000152 Ga0495675_0000152_46406_47380 317
205 3300047471 Ga0495684_0000022 Ga0495684_0000022_70545_71519 317
206 3300047673 Ga0495593_0000416 Ga0495593_0000416_4698_5672 317
207 3300048088 Ga0495602_0000106 Ga0495602_0000106_4729_5703 317
208 3300049663 Ga0501223_016274 Ga0501223_016274_302_1285 317
209 3300049741 Ga0501079_0154309 Ga0501079_0154309_767_1744 317
210 3300049743 Ga0501081_0015006 Ga0501081_0015006_372_1349 317
211 3300049744 Ga0501083_0114898 Ga0501083_0114898_287_1264 317
212 3300053077 Ga0495601_0000011 Ga0495601_0000011_244303_245277 317
213 3300053078 Ga0495612_0000006 Ga0495612_0000006_41615_42589 317
214 3300053084 Ga0495595_0000021 Ga0495595_0000021_110255_111229 317
215 3300053085 Ga0495619_0000013 Ga0495619_0000013_244224_245198 317
216 3300060353 Ga0501082_0064796 Ga0501082_0064796_2039_3016 317
217 3300005434 Ga0070709_10038932 Ga0070709_100389322 318
218 3300005435 Ga0070714_100030446 Ga0070714_1000304464 318
219 3300005436 Ga0070713_100126411 Ga0070713_1001264113 318
220 3300005436 Ga0070713_100183702 Ga0070713_1001837021 318
221 3300005437 Ga0070710_10010720 Ga0070710_100107202 318
222 3300005467 Ga0070706_100280381 Ga0070706_1002803812 318
223 3300005468 Ga0070707_100134584 Ga0070707_1001345843 318
224 3300005471 Ga0070698_100209483 Ga0070698_1002094832 318
225 3300005471 Ga0070698_100430357 Ga0070698_1004303571 318
226 3300005937 Ga0081455_10114840 Ga0081455_101148402 318
227 3300005983 Ga0081540_1005856 Ga0081540_10058566 318
228 3300006028 Ga0070717_10067509 Ga0070717_100675092 318
229 3300006028 Ga0070717_10444649 Ga0070717_104446491 318
230 3300006163 Ga0070715_10023948 Ga0070715_100239482 318
231 3300006175 Ga0070712_100319145 Ga0070712_1003191452 318
232 3300006844 Ga0075428_100169488 Ga0075428_1001694881 318
233 3300006852 Ga0075433_10214864 Ga0075433_102148641 318
234 3300007076 Ga0075435_100055659 Ga0075435_1000556593 318
235 3300007076 Ga0075435_100195794 Ga0075435_1001957942 318
236 3300007265 Ga0099794_10063532 Ga0099794_100635322 318
237 3300007788 Ga0099795_10011965 Ga0099795_100119651 318
238 3300009147 Ga0114129_10323449 Ga0114129_103234492 318
239 3300025906 Ga0207699_10013602 Ga0207699_100136025 318
240 3300025910 Ga0207684_10108669 Ga0207684_101086692 318
241 3300025922 Ga0207646_10209555 Ga0207646_102095552 318
242 3300025928 Ga0207700_10132847 Ga0207700_101328472 318
243 3300025929 Ga0207664_10326756 Ga0207664_103267561 318
244 3300025939 Ga0207665_10002893 Ga0207665_100028938 318
245 3300030763 Ga0265763_1000094 Ga0265763_10000942 318
246 3300031090 Ga0265760_10020184 Ga0265760_100201842 318
247 3300031241 Ga0265325_10007742 Ga0265325_100077422 318
248 3300031249 Ga0265339_10000085 Ga0265339_1000008519 318
249 3300031595 Ga0265313_10000505 Ga0265313_1000050534 318
250 3300035083 Ga0373926_0017148 Ga0373926_0017148_1160_2143 318
251 3300035113 Ga0373936_0002264 Ga0373936_0002264_2533_3516 318
252 3300035116 Ga0373945_0002816 Ga0373945_0002816_3070_4053 318
253 3300035117 Ga0373953_0001439 Ga0373953_0001439_1095_2078 318
254 3300035120 Ga0373957_0001450 Ga0373957_0001450_3481_4464 318
255 3300035170 Ga0373943_0012791 Ga0373943_0012791_1645_2628 318
256 3300035171 Ga0373946_0033212 Ga0373946_0033212_210_1193 318
257 3300035172 Ga0373955_0000048 Ga0373955_0000048_5515_6498 318
258 3300035410 Ga0373924_0003224 Ga0373924_0003224_1107_2090 318
259 3300035692 Ga0373935_0000082 Ga0373935_0000082_26867_27850 318
260 3300035695 Ga0373927_0005013 Ga0373927_0005013_4914_5897 318
261 3300035724 Ga0373933_0003764 Ga0373933_0003764_3061_4044 318
262 3300035725 Ga0373947_0000300 Ga0373947_0000300_1487_2470 318
263 3300036401 Ga0373937_0000019 Ga0373937_0000019_18691_19674 318
264 3300037068 Ga0373925_0000026 Ga0373925_0000026_66976_67959 318
265 3300037471 Ga0395905_0069627 Ga0395905_0069627_232_1212 318
266 3300039447 Ga0436361_0856463 Ga0436361_0856463_1520_2500 318
267 3300046454 Ga0495592_0000017 Ga0495592_0000017_127565_128548 318
268 3300046459 Ga0495629_0013099 Ga0495629_0013099_3695_4678 318
269 3300046462 Ga0495651_0040884 Ga0495651_0040884_249_1232 318
270 3300046463 Ga0495653_0000033 Ga0495653_0000033_3695_4678 318
271 3300046476 Ga0495662_0000527 Ga0495662_0000527_4739_5722 318
272 3300046477 Ga0495664_0000008 Ga0495664_0000008_66976_67959 318
273 3300046511 Ga0495608_0000014 Ga0495608_0000014_3703_4686 318
274 3300046514 Ga0495618_0000027 Ga0495618_0000027_107837_108820 318
275 3300046516 Ga0495628_0000008 Ga0495628_0000008_66961_67944 318
276 3300046517 Ga0495630_0009577 Ga0495630_0009577_5514_6497 318
277 3300046529 Ga0495652_0000005 Ga0495652_0000005_66976_67959 318
278 3300046533 Ga0495640_0000017 Ga0495640_0000017_119008_119991 318
279 3300046535 Ga0495586_0106250 Ga0495586_0106250_526_1509 318
280 3300046536 Ga0495587_0000005 Ga0495587_0000005_290440_291423 318
281 3300046543 Ga0495645_0000007 Ga0495645_0000007_268586_269569 318
282 3300046558 Ga0495633_0013016 Ga0495633_0013016_2061_3044 318
283 3300046559 Ga0495667_0000012 Ga0495667_0000012_216276_217259 318
284 3300046642 Ga0495634_0000843 Ga0495634_0000843_9888_10871 318
285 3300046663 Ga0495635_0000010 Ga0495635_0000010_3729_4712 318
286 3300046675 Ga0495657_0000108 Ga0495657_0000108_3772_4755 318
287 3300046678 Ga0495599_0000015 Ga0495599_0000015_67191_68174 318
288 3300046679 Ga0495623_0004942 Ga0495623_0004942_3705_4688 318
289 3300046680 Ga0495646_0000066 Ga0495646_0000066_18613_19596 318
290 3300046683 Ga0495658_0067467 Ga0495658_0067467_803_1786 318
291 3300046690 Ga0495624_0011125 Ga0495624_0011125_5145_6128 318
292 3300046809 Ga0495600_0000128 Ga0495600_0000128_41410_42393 318
293 3300047315 Ga0495581_0011643 Ga0495581_0011643_860_1843 318
294 3300047317 Ga0495604_0000001 Ga0495604_0000001_216277_217260 318
295 3300047319 Ga0495674_0000012 Ga0495674_0000012_251008_251991 318
296 3300047322 Ga0495680_0000409 Ga0495680_0000409_3700_4683 318
297 3300047444 Ga0495675_0000152 Ga0495675_0000152_47394_48377 318
298 3300047471 Ga0495684_0000022 Ga0495684_0000022_71533_72516 318
299 3300047673 Ga0495593_0000416 Ga0495593_0000416_3701_4684 318
300 3300048088 Ga0495602_0000106 Ga0495602_0000106_3732_4715 318
301 3300048908 Ga0496105_0068641 Ga0496105_0068641_1012_2022 318
302 3300048912 Ga0496109_0039549 Ga0496109_0039549_756_1766 318
303 3300048913 Ga0496110_0217538 Ga0496110_0217538_586_1566 318
304 3300048918 Ga0496115_0007456 Ga0496115_0007456_5369_6379 318
305 3300050507 nmdc:mga05p37_144391_c1 nmdc:mga05p37_144391_c1_245_1225 318
306 3300050507 nmdc:mga05p37_209104_c1 nmdc:mga05p37_209104_c1_238_1218 318
307 3300050512 nmdc:mga0n895_169350_c1 nmdc:mga0n895_169350_c1_47_1027 318
308 3300050515 nmdc:mga0a205_325560_c1 nmdc:mga0a205_325560_c1_290_1270 318
309 3300053077 Ga0495601_0000011 Ga0495601_0000011_245291_246274 318
310 3300053078 Ga0495612_0000006 Ga0495612_0000006_40618_41601 318
311 3300053084 Ga0495595_0000021 Ga0495595_0000021_111243_112226 318
312 3300053085 Ga0495619_0000013 Ga0495619_0000013_245212_246195 318
313 3300050509 nmdc:mga0qj67_18_c1 nmdc:mga0qj67_18_c1_47969_48943 319
314 iso_pu_bacteria 2894023352 2894024700 319
315 3300049588 Ga0501072_0076823 Ga0501072_0076823_595_1584 320
316 3300061734 Ga0530510_0070782 Ga0530510_0070782_1483_2472 320
317 iso_pu_bacteria 2881101125 2881105103 321
318 3300042127 Ga0450890_006285 Ga0450890_006285_55_1023 322
319 3300042439 Ga0439464_0001530 Ga0439464_0001530_1337_2305 322
320 3300044683 Ga0466965_0035685 Ga0466965_0035685_104_1075 322
321 3300003781 Ga0055536_1004575 Ga0055536_10045753 323
322 3300003792 Ga0055540_1000317 Ga0055540_100031738 323
323 3300006048 Ga0075363_100005502 Ga0075363_1000055027 323
324 3300006058 Ga0075432_10035890 Ga0075432_100358902 323
325 3300006177 Ga0075362_10058565 Ga0075362_100585652 323
326 3300006178 Ga0075367_10064105 Ga0075367_100641051 323
327 3300006195 Ga0075366_10002115 Ga0075366_100021156 323
328 3300006195 Ga0075366_10007568 Ga0075366_100075682 323
329 3300006353 Ga0075370_10000192 Ga0075370_100001925 323
330 3300025292 Ga0209676_1000302 Ga0209676_100030216 323
331 3300025303 Ga0209051_1000101 Ga0209051_100010174 323
332 3300025304 Ga0209257_1004795 Ga0209257_10047954 323
333 3300027907 Ga0207428_10131840 Ga0207428_101318402 323
334 3300028794 Ga0307515_10000322 Ga0307515_10000322125 323
335 3300031456 Ga0307513_10281803 Ga0307513_102818032 323
336 3300041404 Ga0439436_0012528 Ga0439436_0012528_259_1230 323
337 3300041413 Ga0439465_0022459 Ga0439465_0022459_864_1835 323
338 3300042002 Ga0439442_017316 Ga0439442_017316_314_1285 323
339 3300042006 Ga0439432_016565 Ga0439432_016565_1250_2221 323
340 3300042127 Ga0450890_005857 Ga0450890_005857_478_1449 323
341 3300050489 nmdc:mga03683_47626_c1 nmdc:mga03683_47626_c1_89_1072 323
342 3300050490 nmdc:mga03n38_130903_c1 nmdc:mga03n38_130903_c1_135_1106 323
343 3300050493 nmdc:mga0k408_5806_c1 nmdc:mga0k408_5806_c1_2756_3727 323
344 3300050494 nmdc:mga06z11_12735_c1 nmdc:mga06z11_12735_c1_1070_2041 323

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

79

355

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9367 25 323
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9336 25 323
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.9311 24 323
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.928 24 323
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9086 24 320
ID Description Score Start End Superfamily
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.929 24 323 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9283 24 323 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.923 24 323 3.40.190.150
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9187 24 323 3.40.190.150
2dvzA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9127 124 241 3.40.190.10
ID Description Score Start End GO Terms
AF-H0BVV3-F1-model_v4 Uncharacterized protein 0.9676 22 323
AF-A0A5A7MKX6-F1-model_v4 MFS transporter 0.9641 45 323
AF-A0A315DV88-F1-model_v4 ABC transporter substrate-binding protein 0.9592 18 323
AF-A0A6M1LFH8-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9585 12 323
AF-H0BVV3-F1-model_v4 Uncharacterized protein 0.9582 22 323

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pLDDT pTM Quality
91.62 0.86 High
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Predicted Structure (AlphaFold2)

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