F415922

General Info

Members Datasets Scaffolds Average Seq Length
344 201 688 287

Family's Representative Sequence

Representative Sequence 3300006881|Ga0068865_100269368|Ga0068865_1002693681
Length 341
Sequence VGQGKRALLRLGEAYPRPGSGPKRSLPARSPLESPASGIHKTIFESLATRESFAMKNASRSPYLVGLIGAGIQASRTPSMHEHEAAEQGLRCEYRLIDLEKLQAGAEALADLLKDAEAKGFVGLNITYPCKQTVLALLHELSDEARAIGAVNTVVLSKGRRVGHNTDWWGFAESFRRGLPDVRTNGVVQLGAGGAGAAVAHAILTLGAHKLTLFDLDACRAKKLADDLCARFGASRAMAGTDLAVAMSTADGLIHATPTGMVKHPGLPLPAELLRPEMWVAEIVYFPLETELLRVARALGCRTMNGSGMAVFQAVEAFRLFTGVAPDAERMQRHFASMGVS

Samples

Sample ID Description Type Environment
1 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
49 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
50 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
82 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
122 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
123 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
124 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
126 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
131 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
132 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
138 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
143 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
144 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
145 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
146 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
147 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
148 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
149 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
150 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
151 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
152 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
155 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
158 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
159 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
176 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
177 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
178 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
179 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
180 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
181 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
182 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
183 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
184 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
187 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
188 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
189 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
190 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
193 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
196 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
197 2721755607 Pseudomonas fluorescens Pt14 Isolate Rhizosphere
198 2929189879 Pseudomonas sp. R-71842 Hybrid assembly Isolate Unclassified
199 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
200 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
201 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.55
Metatranscriptomes 0
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.74
Nodule 0
Rhizoplane 1.16
Rhizosphere 95.93
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068865_100269368 3300006881 Bacteria 1351
2 JGI25406J46586_10000528 3300003203 Bacteria 17854
3 rootH1_10105966 3300003316 Bacteria 1782
4 Ga0070676_10051608 3300005328 Bacteria 2415
5 Ga0070676_10238349 3300005328 Bacteria 1209
6 Ga0070683_100223561 3300005329 Bacteria 1789
7 Ga0068869_100001979 3300005334 Bacteria 12300
8 Ga0070666_10029134 3300005335 Bacteria 3628
9 Ga0070666_10030915 3300005335 Bacteria 3531
10 Ga0070666_10090932 3300005335 Bacteria 2096
11 Ga0070666_10209886 3300005335 Bacteria 1371
12 Ga0070680_100166974 3300005336 Bacteria 1851
13 Ga0070682_100044315 3300005337 Bacteria 2754
14 Ga0068868_100009734 3300005338 Bacteria 6934
15 Ga0068868_100158536 3300005338 Bacteria 1868
16 Ga0070689_100009492 3300005340 Bacteria 6899
17 Ga0070692_10016808 3300005345 Bacteria 3486
18 Ga0070669_100018726 3300005353 Bacteria 4949
19 Ga0070669_100132630 3300005353 Bacteria 1913
20 Ga0070669_100330557 3300005353 Bacteria 1233
21 Ga0070675_100165082 3300005354 Bacteria 1907
22 Ga0070675_100314415 3300005354 Bacteria 1382
23 Ga0070671_100183844 3300005355 Unclassified 1770
24 Ga0070674_100069594 3300005356 Bacteria 2483
25 Ga0070674_100213734 3300005356 Bacteria 1496
26 Ga0070673_100020465 3300005364 Bacteria 4773
27 Ga0070688_100001428 3300005365 Bacteria 11889
28 Ga0070667_100006010 3300005367 Bacteria 10086
29 Ga0070667_100022682 3300005367 Bacteria 5205
30 Ga0070701_10031980 3300005438 Bacteria 2616
31 Ga0070711_100064939 3300005439 Bacteria 2551
32 Ga0070705_100175692 3300005440 Bacteria 1446
33 Ga0070705_100177600 3300005440 Bacteria 1439
34 Ga0070700_100029960 3300005441 Bacteria 3248
35 Ga0070678_100005051 3300005456 Bacteria 7572
36 Ga0070678_100129163 3300005456 Bacteria 2005
37 Ga0070662_100007550 3300005457 Bacteria 7055
38 Ga0070662_100271340 3300005457 Bacteria 1370
39 Ga0070681_10054128 3300005458 Bacteria 3998
40 Ga0068867_100000173 3300005459 Bacteria 42222
41 Ga0068867_100024684 3300005459 Bacteria 4308
42 Ga0068867_100050692 3300005459 Bacteria 3060
43 Ga0068867_100093967 3300005459 Bacteria 2279
44 Ga0070685_10001938 3300005466 Bacteria 10749
45 Ga0070679_100149524 3300005530 Bacteria 2313
46 Ga0070695_100373040 3300005545 Bacteria 1075
47 Ga0070696_100024866 3300005546 Bacteria 4070
48 Ga0070696_100178613 3300005546 Bacteria 1574
49 Ga0070665_100007589 3300005548 Bacteria 11031
50 Ga0070665_100017067 3300005548 Bacteria 7281
51 Ga0068857_100007814 3300005577 Bacteria 9219
52 Ga0068854_100004659 3300005578 Bacteria 8653
53 Ga0068856_100668039 3300005614 Unclassified 1060
54 Ga0068852_100062268 3300005616 Bacteria 3245
55 Ga0068859_100036899 3300005617 Bacteria 4906
56 Ga0068859_100716767 3300005617 Bacteria 1090
57 Ga0068864_100038075 3300005618 Bacteria 4105
58 Ga0068866_10000280 3300005718 Bacteria 24402
59 Ga0068866_10001824 3300005718 Bacteria 8961
60 Ga0068866_10045184 3300005718 Bacteria 2207
61 Ga0068866_10210146 3300005718 Bacteria 1168
62 Ga0068861_100003429 3300005719 Bacteria 10523
63 Ga0068861_100348030 3300005719 Bacteria 1299
64 Ga0068861_100356640 3300005719 Bacteria 1285
65 Ga0068851_10051811 3300005834 Bacteria 2086
66 Ga0068863_100009298 3300005841 Bacteria 9588
67 Ga0068863_100446350 3300005841 Bacteria 1269
68 Ga0068858_100002541 3300005842 Bacteria 18396
69 Ga0068858_100005927 3300005842 Bacteria 11931
70 Ga0068858_100098372 3300005842 Bacteria 2728
71 Ga0068858_100427148 3300005842 Bacteria 1275
72 Ga0068860_100012626 3300005843 Bacteria 8312
73 Ga0068860_100035159 3300005843 Bacteria 4807
74 Ga0068862_100011544 3300005844 Bacteria 7288
75 Ga0068862_100027749 3300005844 Bacteria 4766
76 Ga0068862_100069868 3300005844 Bacteria 3031
77 Ga0081455_10000022 3300005937 Bacteria 159620
78 Ga0081539_10002538 3300005985 Bacteria 25414
79 Ga0070717_10122601 3300006028 Bacteria 2228
80 Ga0075365_10033998 3300006038 Bacteria 3289
81 Ga0075363_100042209 3300006048 Bacteria 2409
82 Ga0075367_10029584 3300006178 Bacteria 3134
83 Ga0097621_100003602 3300006237 Bacteria 10704
84 Ga0097621_100008619 3300006237 Bacteria 7354
85 Ga0097621_100010047 3300006237 Bacteria 6901
86 Ga0097621_100206907 3300006237 Bacteria 1705
87 Ga0068871_100057139 3300006358 Bacteria 3174
88 Ga0068871_100059963 3300006358 Bacteria 3102
89 Ga0075428_100039698 3300006844 Bacteria 5180
90 Ga0075428_100650399 3300006844 Bacteria 1124
91 Ga0068865_100011127 3300006881 Bacteria 5619
92 Ga0068865_100207778 3300006881 Bacteria 1524
93 Ga0068865_100274331 3300006881 Bacteria 1340
94 Ga0097620_100036900 3300006931 Bacteria 4906
95 Ga0097620_100716780 3300006931 Bacteria 1090
96 Ga0075435_100007622 3300007076 Bacteria 7728
97 Ga0111539_10867518 3300009094 Unclassified 1050
98 Ga0105245_10004459 3300009098 Bacteria 12380
99 Ga0105245_10037265 3300009098 Bacteria 4323
100 Ga0105247_10067417 3300009101 Bacteria 2230
101 Ga0114129_10226684 3300009147 Bacteria 2518
102 Ga0114129_10674472 3300009147 Bacteria 1332
103 Ga0105243_10003378 3300009148 Bacteria 12952
104 Ga0105243_10071191 3300009148 Bacteria 2811
105 Ga0105243_10131119 3300009148 Bacteria 2126
106 Ga0105241_10278449 3300009174 Bacteria 1428
107 Ga0105242_10006467 3300009176 Bacteria 9026
108 Ga0105242_10019276 3300009176 Bacteria 5344
109 Ga0105242_10033236 3300009176 Bacteria 4129
110 Ga0105242_10062000 3300009176 Bacteria 3076
111 Ga0105242_10092673 3300009176 Bacteria 2546
112 Ga0105242_10223672 3300009176 Bacteria 1683
113 Ga0105242_10277610 3300009176 Bacteria 1520
114 Ga0105248_10011780 3300009177 Bacteria 9647
115 Ga0105248_10025223 3300009177 Bacteria 6610
116 Ga0105248_10034097 3300009177 Bacteria 5690
117 Ga0105248_10045322 3300009177 Bacteria 4932
118 Ga0105248_10263085 3300009177 Bacteria 1942
119 Ga0105248_10941654 3300009177 Bacteria 975
120 Ga0105238_10049552 3300009551 Bacteria 4228
121 Ga0105238_10577039 3300009551 Bacteria 1131
122 Ga0105249_10252609 3300009553 Bacteria 1749
123 Ga0105239_10152820 3300010375 Bacteria 2576
124 Ga0105246_10168783 3300011119 Bacteria 1674
125 Ga0105246_10182122 3300011119 Bacteria 1618
126 Ga0157369_10012208 3300013105 Bacteria 9753
127 Ga0157369_10159980 3300013105 Bacteria 2377
128 Ga0157374_10111704 3300013296 Bacteria 2629
129 Ga0157374_10119135 3300013296 Unclassified 2546
130 Ga0157374_10570117 3300013296 Bacteria 1141
131 Ga0157378_10005351 3300013297 Bacteria 11259
132 Ga0157378_10027951 3300013297 Bacteria 4973
133 Ga0157378_10450280 3300013297 Bacteria 1277
134 Ga0163162_10110492 3300013306 Bacteria 2846
135 Ga0157372_10270781 3300013307 Bacteria 1973
136 Ga0157375_10040819 3300013308 Bacteria 4476
137 Ga0157375_10097535 3300013308 Bacteria 3014
138 Ga0157375_10411452 3300013308 Bacteria 1519
139 Ga0157375_10489429 3300013308 Bacteria 1395
140 Ga0163163_10006786 3300014325 Bacteria 10039
141 Ga0163163_10025572 3300014325 Bacteria 5629
142 Ga0163163_10036673 3300014325 Bacteria 4764
143 Ga0163163_10419010 3300014325 Bacteria 1398
144 Ga0163163_10657472 3300014325 Unclassified 1111
145 Ga0157380_10065321 3300014326 Bacteria 2924
146 Ga0157380_10130693 3300014326 Bacteria 2142
147 Ga0157380_10254863 3300014326 Bacteria 1590
148 Ga0157380_10420371 3300014326 Bacteria 1275
149 Ga0182008_10008870 3300014497 Bacteria 5457
150 Ga0157377_10000039 3300014745 Bacteria 112711
151 Ga0157379_10002420 3300014968 Bacteria 15611
152 Ga0157379_10079671 3300014968 Bacteria 2933
153 Ga0157379_10179742 3300014968 Bacteria 1911
154 Ga0157379_10318752 3300014968 Bacteria 1419
155 Ga0157376_10002587 3300014969 Bacteria 12284
156 Ga0157376_10006796 3300014969 Bacteria 8100
157 Ga0157376_10129446 3300014969 Bacteria 2250
158 Ga0182007_10024539 3300015262 Bacteria 2109
159 Ga0213875_10000207 3300021388 Bacteria 60208
160 Ga0207692_10011211 3300025898 Bacteria 3804
161 Ga0207642_10001505 3300025899 Bacteria 7173
162 Ga0207642_10045641 3300025899 Bacteria 1947
163 Ga0207680_10004530 3300025903 Bacteria 6595
164 Ga0207680_10010806 3300025903 Bacteria 4583
165 Ga0207645_10019212 3300025907 Bacteria 4483
166 Ga0207643_10007038 3300025908 Bacteria 6027
167 Ga0207707_10011948 3300025912 Bacteria 7553
168 Ga0207693_10000397 3300025915 Bacteria 40037
169 Ga0207693_10006520 3300025915 Bacteria 9660
170 Ga0207660_10145386 3300025917 Bacteria 1817
171 Ga0207652_10173116 3300025921 Bacteria 1937
172 Ga0207681_10107508 3300025923 Bacteria 2023
173 Ga0207659_10295907 3300025926 Bacteria 1328
174 Ga0207687_10000188 3300025927 Bacteria 41329
175 Ga0207687_10144207 3300025927 Bacteria 1810
176 Ga0207687_10148706 3300025927 Bacteria 1785
177 Ga0207700_10246912 3300025928 Bacteria 1523
178 Ga0207706_10005472 3300025933 Bacteria 11840
179 Ga0207706_10161386 3300025933 Bacteria 1970
180 Ga0207686_10000192 3300025934 Bacteria 47563
181 Ga0207686_10010254 3300025934 Bacteria 5097
182 Ga0207686_10047974 3300025934 Bacteria 2643
183 Ga0207686_10210386 3300025934 Bacteria 1398
184 Ga0207686_10213885 3300025934 Bacteria 1387
185 Ga0207709_10001551 3300025935 Bacteria 15784
186 Ga0207670_10024432 3300025936 Bacteria 3776
187 Ga0207704_10004724 3300025938 Bacteria 6250
188 Ga0207704_10015161 3300025938 Bacteria 3918
189 Ga0207665_10125244 3300025939 Bacteria 1819
190 Ga0207691_10045279 3300025940 Bacteria 4045
191 Ga0207691_10157436 3300025940 Bacteria 1994
192 Ga0207711_10012830 3300025941 Bacteria 6963
193 Ga0207711_10029471 3300025941 Bacteria 4631
194 Ga0207711_10035973 3300025941 Bacteria 4200
195 Ga0207711_10058551 3300025941 Bacteria 3316
196 Ga0207711_10280514 3300025941 Unclassified 1534
197 Ga0207689_10000778 3300025942 Bacteria 30607
198 Ga0207689_10002268 3300025942 Bacteria 18025
199 Ga0207689_10044073 3300025942 Bacteria 3688
200 Ga0207689_10142707 3300025942 Bacteria 1973
201 Ga0207689_10159893 3300025942 Bacteria 1856
202 Ga0207668_10088422 3300025972 Bacteria 2269
203 Ga0207668_10092399 3300025972 Bacteria 2227
204 Ga0207640_10003273 3300025981 Bacteria 8729
205 Ga0207658_10235544 3300025986 Bacteria 1548
206 Ga0207677_10000402 3300026023 Bacteria 29818
207 Ga0207677_10004334 3300026023 Bacteria 7601
208 Ga0207677_10139590 3300026023 Bacteria 1853
209 Ga0207677_10182380 3300026023 Bacteria 1652
210 Ga0207703_10011572 3300026035 Bacteria 6861
211 Ga0207703_10015883 3300026035 Bacteria 5873
212 Ga0207703_10016768 3300026035 Bacteria 5715
213 Ga0207703_10161612 3300026035 Bacteria 1962
214 Ga0207708_10002996 3300026075 Bacteria 12441
215 Ga0207708_10101723 3300026075 Bacteria 2225
216 Ga0207641_10199330 3300026088 Bacteria 1845
217 Ga0207641_10252580 3300026088 Bacteria 1647
218 Ga0207648_10000836 3300026089 Bacteria 34689
219 Ga0207648_10010538 3300026089 Bacteria 8753
220 Ga0207648_10015195 3300026089 Bacteria 7086
221 Ga0207648_10112513 3300026089 Bacteria 2390
222 Ga0207648_10142243 3300026089 Bacteria 2115
223 Ga0207648_10154526 3300026089 Bacteria 2025
224 Ga0207648_10219395 3300026089 Bacteria 1690
225 Ga0207676_10000918 3300026095 Bacteria 22818
226 Ga0207674_10039010 3300026116 Bacteria 4926
227 Ga0207675_100004697 3300026118 Bacteria 13147
228 Ga0207675_100042471 3300026118 Bacteria 4245
229 Ga0207675_100043299 3300026118 Bacteria 4204
230 Ga0207675_100388144 3300026118 Bacteria 1374
231 Ga0207675_100476615 3300026118 Bacteria 1240
232 Ga0207675_100522043 3300026118 Bacteria 1184
233 Ga0207683_10000464 3300026121 Bacteria 37721
234 Ga0207683_10075319 3300026121 Bacteria 2987
235 Ga0207683_10079461 3300026121 Bacteria 2908
236 Ga0207683_10099725 3300026121 Bacteria 2592
237 Ga0207698_10160719 3300026142 Bacteria 1964
238 Ga0268266_10036158 3300028379 Bacteria 4202
239 Ga0268265_10091976 3300028380 Bacteria 2427
240 Ga0268265_10107883 3300028380 Bacteria 2265
241 Ga0268265_10325594 3300028380 Bacteria 1394
242 Ga0268264_10012405 3300028381 Bacteria 7014
243 Ga0373934_0024139 3300035086 Bacteria 2351
244 Ga0373954_0016433 3300035118 Bacteria 3312
245 Ga0373956_0091557 3300035119 Bacteria 1403
246 Ga0373935_0099091 3300035692 Bacteria 1919
247 Ga0373933_0049403 3300035724 Bacteria 2508
248 Ga0373947_0026364 3300035725 Bacteria 3396
249 Ga0373937_0030404 3300036401 Bacteria 4893
250 Ga0373937_0161620 3300036401 Bacteria 2100
251 Ga0373937_0164739 3300036401 Bacteria 2078
252 Ga0373937_0369039 3300036401 Bacteria 1361
253 Ga0373937_0565659 3300036401 Bacteria 1080
254 Ga0395905_0045357 3300037471 Bacteria 4123
255 Ga0436364_1383349 3300037853 Bacteria 102720
256 Ga0439465_0070148 3300041413 Bacteria 1173
257 Ga0439435_0005865 3300042436 Bacteria 2728
258 Ga0466969_0014453 3300044656 Bacteria 4151
259 Ga0466967_0228395 3300045976 Bacteria 1771
260 Ga0495592_0000480 3300046454 Bacteria 29229
261 Ga0495592_0036657 3300046454 Bacteria 3692
262 Ga0495653_0112208 3300046463 Bacteria 1957
263 Ga0495608_0000927 3300046511 Bacteria 20600
264 Ga0495628_0007796 3300046516 Bacteria 9229
265 Ga0495630_0010460 3300046517 Bacteria 6700
266 Ga0495632_0106403 3300046519 Unclassified 1320
267 Ga0495643_0011730 3300046522 Bacteria 5319
268 Ga0495640_0186539 3300046533 Bacteria 1320
269 Ga0495586_0009977 3300046535 Bacteria 5059
270 Ga0495586_0045364 3300046535 Bacteria 2369
271 Ga0495587_0012289 3300046536 Bacteria 5398
272 Ga0495645_0246525 3300046543 Bacteria 1189
273 Ga0495667_0000885 3300046559 Bacteria 19363
274 Ga0495667_0043055 3300046559 Bacteria 2993
275 Ga0495625_0004443 3300046660 Bacteria 13258
276 Ga0495635_0002244 3300046663 Bacteria 13134
277 Ga0495657_0146777 3300046675 Bacteria 1467
278 Ga0495599_0143502 3300046678 Bacteria 1481
279 Ga0495623_0073619 3300046679 Bacteria 2123
280 Ga0495647_0046018 3300046681 Bacteria 1679
281 Ga0495658_0039905 3300046683 Bacteria 2607
282 Ga0495613_0030828 3300046689 Bacteria 3984
283 Ga0495613_0344783 3300046689 Bacteria 1024
284 Ga0495671_0206997 3300046692 Bacteria 951
285 Ga0495600_0009560 3300046809 Bacteria 5993
286 Ga0495604_0006683 3300047317 Bacteria 9143
287 Ga0495604_0289015 3300047317 Bacteria 1105
288 Ga0495680_0003156 3300047322 Bacteria 16416
289 Ga0495679_008332 3300047446 Bacteria 4225
290 Ga0495593_0053961 3300047673 Bacteria 2120
291 Ga0496104_0016462 3300048907 Bacteria 6716
292 Ga0496105_0013735 3300048908 Bacteria 6431
293 Ga0496106_0060340 3300048909 Bacteria 2875
294 Ga0496112_0009386 3300048915 Bacteria 8810
295 Ga0495678_036689 3300049459 Bacteria 1998
296 Ga0501032_0104762 3300049569 Bacteria 1874
297 Ga0501032_0273451 3300049569 Bacteria 1094
298 Ga0501036_0072348 3300049572 Bacteria 2914
299 Ga0501036_0361919 3300049572 Bacteria 1211
300 Ga0501038_0009683 3300049574 Bacteria 8838
301 Ga0501039_0192087 3300049575 Bacteria 1605
302 Ga0501040_0004372 3300049576 Bacteria 9184
303 Ga0501041_0003857 3300049577 Bacteria 8623
304 Ga0501043_0000072 3300049579 Bacteria 89021
305 Ga0501043_0366537 3300049579 Bacteria 1093
306 Ga0501046_0021829 3300049580 Bacteria 5277
307 Ga0501046_0067953 3300049580 Bacteria 2774
308 Ga0501047_0000138 3300049581 Bacteria 89028
309 Ga0501048_0037496 3300049582 Bacteria 3481
310 Ga0501048_0055849 3300049582 Bacteria 2802
311 Ga0501068_0021408 3300049584 Bacteria 3775
312 Ga0501070_0071333 3300049586 Bacteria 2876
313 Ga0501071_0005980 3300049587 Bacteria 7883
314 Ga0501072_0077164 3300049588 Unclassified 2637
315 Ga0501073_0006209 3300049589 Bacteria 8914
316 Ga0501074_0287132 3300049590 Bacteria 1169
317 Ga0501075_0003541 3300049591 Bacteria 10449
318 Ga0501076_0000714 3300049592 Bacteria 21429
319 Ga0501076_0220428 3300049592 Bacteria 1550
320 Ga0501077_0050459 3300049593 Bacteria 2645
321 Ga0501077_0077718 3300049593 Bacteria 2103
322 Ga0501079_0005719 3300049741 Bacteria 9291
323 Ga0501079_0073522 3300049741 Bacteria 2642
324 Ga0501080_0061644 3300049742 Unclassified 3492
325 Ga0501080_0066377 3300049742 Bacteria 3355
326 Ga0501081_0000733 3300049743 Bacteria 19116
327 Ga0501081_0045027 3300049743 Bacteria 3030
328 Ga0501083_0149505 3300049744 Bacteria 1529
329 Ga0501045_0005067 3300049824 Bacteria 9122
330 Ga0501045_0005082 3300049824 Bacteria 9105
331 Ga0501045_0130465 3300049824 Bacteria 1868
332 nmdc:mga03n38_18690_c1 3300050490 Bacteria 2740
333 nmdc:mga05p37_538132_c1 3300050507 Bacteria 1332
334 Ga0495601_0016420 3300053077 Bacteria 4486
335 Ga0500562_002423 3300053108 Bacteria 4680
336 Ga0500622_0003507 3300053156 Bacteria 10409
337 Ga0501084_0001969 3300054114 Bacteria 16397
338 Ga0501082_0004700 3300060353 Bacteria 11907
339 Ga0530510_0001111 3300061734 Bacteria 17863
340 2723250846 2721755607 Bacteria 5841722
341 2929194633 2929189879 Bacteria 5930554
342 8015691586 8015687852 Bacteria 6613826
343 8020940869 8020938398 Bacteria 7472757
344 8020956584 8020953355 Bacteria 7439080
345 Ga0068865_100269368
346 JGI25406J46586_10000528
347 rootH1_10105966
348 Ga0070676_10051608
349 Ga0070676_10238349
350 Ga0070683_100223561
351 Ga0068869_100001979
352 Ga0070666_10029134
353 Ga0070666_10030915
354 Ga0070666_10090932
355 Ga0070666_10209886
356 Ga0070680_100166974
357 Ga0070682_100044315
358 Ga0068868_100009734
359 Ga0068868_100158536
360 Ga0070689_100009492
361 Ga0070692_10016808
362 Ga0070669_100018726
363 Ga0070669_100132630
364 Ga0070669_100330557
365 Ga0070675_100165082
366 Ga0070675_100314415
367 Ga0070671_100183844
368 Ga0070674_100069594
369 Ga0070674_100213734
370 Ga0070673_100020465
371 Ga0070688_100001428
372 Ga0070667_100006010
373 Ga0070667_100022682
374 Ga0070701_10031980
375 Ga0070711_100064939
376 Ga0070705_100175692
377 Ga0070705_100177600
378 Ga0070700_100029960
379 Ga0070678_100005051
380 Ga0070678_100129163
381 Ga0070662_100007550
382 Ga0070662_100271340
383 Ga0070681_10054128
384 Ga0068867_100000173
385 Ga0068867_100024684
386 Ga0068867_100050692
387 Ga0068867_100093967
388 Ga0070685_10001938
389 Ga0070679_100149524
390 Ga0070695_100373040
391 Ga0070696_100024866
392 Ga0070696_100178613
393 Ga0070665_100007589
394 Ga0070665_100017067
395 Ga0068857_100007814
396 Ga0068854_100004659
397 Ga0068856_100668039
398 Ga0068852_100062268
399 Ga0068859_100036899
400 Ga0068859_100716767
401 Ga0068864_100038075
402 Ga0068866_10000280
403 Ga0068866_10001824
404 Ga0068866_10045184
405 Ga0068866_10210146
406 Ga0068861_100003429
407 Ga0068861_100348030
408 Ga0068861_100356640
409 Ga0068851_10051811
410 Ga0068863_100009298
411 Ga0068863_100446350
412 Ga0068858_100002541
413 Ga0068858_100005927
414 Ga0068858_100098372
415 Ga0068858_100427148
416 Ga0068860_100012626
417 Ga0068860_100035159
418 Ga0068862_100011544
419 Ga0068862_100027749
420 Ga0068862_100069868
421 Ga0081455_10000022
422 Ga0081539_10002538
423 Ga0070717_10122601
424 Ga0075365_10033998
425 Ga0075363_100042209
426 Ga0075367_10029584
427 Ga0097621_100003602
428 Ga0097621_100008619
429 Ga0097621_100010047
430 Ga0097621_100206907
431 Ga0068871_100057139
432 Ga0068871_100059963
433 Ga0075428_100039698
434 Ga0075428_100650399
435 Ga0068865_100011127
436 Ga0068865_100207778
437 Ga0068865_100274331
438 Ga0097620_100036900
439 Ga0097620_100716780
440 Ga0075435_100007622
441 Ga0111539_10867518
442 Ga0105245_10004459
443 Ga0105245_10037265
444 Ga0105247_10067417
445 Ga0114129_10226684
446 Ga0114129_10674472
447 Ga0105243_10003378
448 Ga0105243_10071191
449 Ga0105243_10131119
450 Ga0105241_10278449
451 Ga0105242_10006467
452 Ga0105242_10019276
453 Ga0105242_10033236
454 Ga0105242_10062000
455 Ga0105242_10092673
456 Ga0105242_10223672
457 Ga0105242_10277610
458 Ga0105248_10011780
459 Ga0105248_10025223
460 Ga0105248_10034097
461 Ga0105248_10045322
462 Ga0105248_10263085
463 Ga0105248_10941654
464 Ga0105238_10049552
465 Ga0105238_10577039
466 Ga0105249_10252609
467 Ga0105239_10152820
468 Ga0105246_10168783
469 Ga0105246_10182122
470 Ga0157369_10012208
471 Ga0157369_10159980
472 Ga0157374_10111704
473 Ga0157374_10119135
474 Ga0157374_10570117
475 Ga0157378_10005351
476 Ga0157378_10027951
477 Ga0157378_10450280
478 Ga0163162_10110492
479 Ga0157372_10270781
480 Ga0157375_10040819
481 Ga0157375_10097535
482 Ga0157375_10411452
483 Ga0157375_10489429
484 Ga0163163_10006786
485 Ga0163163_10025572
486 Ga0163163_10036673
487 Ga0163163_10419010
488 Ga0163163_10657472
489 Ga0157380_10065321
490 Ga0157380_10130693
491 Ga0157380_10254863
492 Ga0157380_10420371
493 Ga0182008_10008870
494 Ga0157377_10000039
495 Ga0157379_10002420
496 Ga0157379_10079671
497 Ga0157379_10179742
498 Ga0157379_10318752
499 Ga0157376_10002587
500 Ga0157376_10006796
501 Ga0157376_10129446
502 Ga0182007_10024539
503 Ga0213875_10000207
504 Ga0207692_10011211
505 Ga0207642_10001505
506 Ga0207642_10045641
507 Ga0207680_10004530
508 Ga0207680_10010806
509 Ga0207645_10019212
510 Ga0207643_10007038
511 Ga0207707_10011948
512 Ga0207693_10000397
513 Ga0207693_10006520
514 Ga0207660_10145386
515 Ga0207652_10173116
516 Ga0207681_10107508
517 Ga0207659_10295907
518 Ga0207687_10000188
519 Ga0207687_10144207
520 Ga0207687_10148706
521 Ga0207700_10246912
522 Ga0207706_10005472
523 Ga0207706_10161386
524 Ga0207686_10000192
525 Ga0207686_10010254
526 Ga0207686_10047974
527 Ga0207686_10210386
528 Ga0207686_10213885
529 Ga0207709_10001551
530 Ga0207670_10024432
531 Ga0207704_10004724
532 Ga0207704_10015161
533 Ga0207665_10125244
534 Ga0207691_10045279
535 Ga0207691_10157436
536 Ga0207711_10012830
537 Ga0207711_10029471
538 Ga0207711_10035973
539 Ga0207711_10058551
540 Ga0207711_10280514
541 Ga0207689_10000778
542 Ga0207689_10002268
543 Ga0207689_10044073
544 Ga0207689_10142707
545 Ga0207689_10159893
546 Ga0207668_10088422
547 Ga0207668_10092399
548 Ga0207640_10003273
549 Ga0207658_10235544
550 Ga0207677_10000402
551 Ga0207677_10004334
552 Ga0207677_10139590
553 Ga0207677_10182380
554 Ga0207703_10011572
555 Ga0207703_10015883
556 Ga0207703_10016768
557 Ga0207703_10161612
558 Ga0207708_10002996
559 Ga0207708_10101723
560 Ga0207641_10199330
561 Ga0207641_10252580
562 Ga0207648_10000836
563 Ga0207648_10010538
564 Ga0207648_10015195
565 Ga0207648_10112513
566 Ga0207648_10142243
567 Ga0207648_10154526
568 Ga0207648_10219395
569 Ga0207676_10000918
570 Ga0207674_10039010
571 Ga0207675_100004697
572 Ga0207675_100042471
573 Ga0207675_100043299
574 Ga0207675_100388144
575 Ga0207675_100476615
576 Ga0207675_100522043
577 Ga0207683_10000464
578 Ga0207683_10075319
579 Ga0207683_10079461
580 Ga0207683_10099725
581 Ga0207698_10160719
582 Ga0268266_10036158
583 Ga0268265_10091976
584 Ga0268265_10107883
585 Ga0268265_10325594
586 Ga0268264_10012405
587 Ga0373934_0024139
588 Ga0373954_0016433
589 Ga0373956_0091557
590 Ga0373935_0099091
591 Ga0373933_0049403
592 Ga0373947_0026364
593 Ga0373937_0030404
594 Ga0373937_0161620
595 Ga0373937_0164739
596 Ga0373937_0369039
597 Ga0373937_0565659
598 Ga0395905_0045357
599 Ga0436364_1383349
600 Ga0439465_0070148
601 Ga0439435_0005865
602 Ga0466969_0014453
603 Ga0466967_0228395
604 Ga0495592_0000480
605 Ga0495592_0036657
606 Ga0495653_0112208
607 Ga0495608_0000927
608 Ga0495628_0007796
609 Ga0495630_0010460
610 Ga0495632_0106403
611 Ga0495643_0011730
612 Ga0495640_0186539
613 Ga0495586_0009977
614 Ga0495586_0045364
615 Ga0495587_0012289
616 Ga0495645_0246525
617 Ga0495667_0000885
618 Ga0495667_0043055
619 Ga0495625_0004443
620 Ga0495635_0002244
621 Ga0495657_0146777
622 Ga0495599_0143502
623 Ga0495623_0073619
624 Ga0495647_0046018
625 Ga0495658_0039905
626 Ga0495613_0030828
627 Ga0495613_0344783
628 Ga0495671_0206997
629 Ga0495600_0009560
630 Ga0495604_0006683
631 Ga0495604_0289015
632 Ga0495680_0003156
633 Ga0495679_008332
634 Ga0495593_0053961
635 Ga0496104_0016462
636 Ga0496105_0013735
637 Ga0496106_0060340
638 Ga0496112_0009386
639 Ga0495678_036689
640 Ga0501032_0104762
641 Ga0501032_0273451
642 Ga0501036_0072348
643 Ga0501036_0361919
644 Ga0501038_0009683
645 Ga0501039_0192087
646 Ga0501040_0004372
647 Ga0501041_0003857
648 Ga0501043_0000072
649 Ga0501043_0366537
650 Ga0501046_0021829
651 Ga0501046_0067953
652 Ga0501047_0000138
653 Ga0501048_0037496
654 Ga0501048_0055849
655 Ga0501068_0021408
656 Ga0501070_0071333
657 Ga0501071_0005980
658 Ga0501072_0077164
659 Ga0501073_0006209
660 Ga0501074_0287132
661 Ga0501075_0003541
662 Ga0501076_0000714
663 Ga0501076_0220428
664 Ga0501077_0050459
665 Ga0501077_0077718
666 Ga0501079_0005719
667 Ga0501079_0073522
668 Ga0501080_0061644
669 Ga0501080_0066377
670 Ga0501081_0000733
671 Ga0501081_0045027
672 Ga0501083_0149505
673 Ga0501045_0005067
674 Ga0501045_0005082
675 Ga0501045_0130465
676 nmdc:mga03n38_18690_c1
677 nmdc:mga05p37_538132_c1
678 Ga0495601_0016420
679 Ga0500562_002423
680 Ga0500622_0003507
681 Ga0501084_0001969
682 Ga0501082_0004700
683 Ga0530510_0001111
684 2723250846
685 2929194633
686 8015691586
687 8020940869
688 8020956584

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08501

Shikimate_dh_N

Shikimate dehydrogenase substrate binding domain

67

154

0.98

PF18317

SDH_C

Shikimate 5'-dehydrogenase C-terminal domain

306

334

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jyo-assembly1.cif.gz_A quinate dehydrogenase from corynebacterium glutamicum in complex with nad 0.9406 2 276
2d5c-assembly1.cif.gz_B crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with shikimate 0.9381 3 279
2d5c-assembly1.cif.gz_B crystal structure of shikimate 5-dehydrogenase (aroe) from thermus thermophilus hb8 in complex with shikimate 0.9311 3 279
2hk8-assembly2.cif.gz_B crystal structure of shikimate dehydrogenase from aquifex aeolicus at 2.35 angstrom resolution 0.9308 2 271
1nvt-assembly1.cif.gz_B crystal structure of shikimate dehydrogenase (aroe or mj1084) in complex with nadp+ 0.9154 2 277
ID Description Score Start End Superfamily
2ez3A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9517 105 243 3.40.50.720
af_P0A6D5_3_112_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9448 2 111 3.40.50.10860
af_P0A6D5_8_104_1.10.560.10 Mainly Alpha;Orthogonal Bundle;GROEL; domain 1;GroEL-like equatorial domain 0.9446 4 103 1.10.560.10
af_Q58484_1_94_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.943 2 93 3.40.50.10860
3tozG01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.9351 2 108 3.40.50.10860
ID Description Score Start End GO Terms
AF-A0A2T7TT75-F1-model_v4 Shikimate dehydrogenase (NADP(+)) (SDH) (EC 1.1.1.25) 0.9879 1 275 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A2G8TFV1-F1-model_v4 Shikimate dehydrogenase 0.9871 3 276 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A534C733-F1-model_v4 Shikimate dehydrogenase (EC 1.1.1.25) 0.9832 2 116 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661
AF-A0A1S1PFM4-F1-model_v4 deleted 0.9824 1 277
AF-F0G485-F1-model_v4 Shikimate 5-dehydrogenase (EC 1.1.1.25) 0.982 2 172 GO:0004764
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0019632
GO:0050661

Map