F415965

General Info

Members Datasets Scaffolds Average Seq Length
344 192 688 317

Family's Representative Sequence

Representative Sequence 3300013306|Ga0163162_10218287|Ga0163162_102182872
Length 351
Sequence MQASSLAAEWIFACTFDRESLVVKPEEMEPTMARFRKALPQLGSELFLTDGGIETTLLFLEGLELPDFAAFHLLKRPEGEAALRKYFRTYATLAARFGTGLILESATWRASADWGTRLGYTEEALANANRQAIRLLEEIRDERRAGSKEVVISGCVGPRGDGYVPAHVMSEDEAQTYHRRQIDTFATTAADMVTAITMNYVEEAVGIARAARAAGMPVALAFTVETDGRLPSGHSLRQAIERVDGATAGYPSYYMVNCAHPTHFDGVLAATEPWTQRIRGLRTNASRKSHAELNDSTELDIGDPDELGEQHAALKRRLPQLVVMGGCCGTDDRHVERIAAACSPLFPKPSA

Samples

Sample ID Description Type Environment
1 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
111 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
119 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
120 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
121 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
124 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
125 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
128 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
129 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
130 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
131 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
132 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
133 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
134 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
135 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
136 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
137 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
138 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
141 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
144 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
145 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
155 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
176 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
189 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
190 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
191 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
192 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.13
Metatranscriptomes 0
Isolates 0.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.78
Nodule 0.29
Rhizoplane 3.2
Rhizosphere 91.57
Stem 0
Stem Tuber 0
Unclassified 5.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0163162_10218287 3300013306 Bacteria 2037
2 Ga0055536_1000258 3300003781 Bacteria 41836
3 Ga0055536_1000336 3300003781 Bacteria 34788
4 Ga0055531_10003789 3300003794 Bacteria 9488
5 Ga0065707_10121529 3300005295 Bacteria 2108
6 Ga0070676_10001578 3300005328 Bacteria 11581
7 Ga0070683_100040994 3300005329 Bacteria 4258
8 Ga0070677_10000682 3300005333 Bacteria 11360
9 Ga0068869_100008299 3300005334 Bacteria 6690
10 Ga0068869_100011567 3300005334 Bacteria 5793
11 Ga0068869_100130968 3300005334 Bacteria 1928
12 Ga0068869_100158011 3300005334 Unclassified 1763
13 Ga0070682_100041047 3300005337 Bacteria 2850
14 Ga0068868_100001824 3300005338 Bacteria 14647
15 Ga0068868_100037797 3300005338 Bacteria 3744
16 Ga0070691_10167106 3300005341 Bacteria 1137
17 Ga0070687_100035336 3300005343 Unclassified 2480
18 Ga0070692_10007464 3300005345 Bacteria 4814
19 Ga0070668_100007976 3300005347 Bacteria 7865
20 Ga0070669_100003449 3300005353 Bacteria 11392
21 Ga0070669_100010750 3300005353 Bacteria 6497
22 Ga0070675_100004292 3300005354 Bacteria 10861
23 Ga0070675_100106432 3300005354 Bacteria 2368
24 Ga0070675_100225050 3300005354 Bacteria 1635
25 Ga0070671_100034247 3300005355 Bacteria 4204
26 Ga0070674_100000170 3300005356 Bacteria 30382
27 Ga0070673_100001911 3300005364 Bacteria 12508
28 Ga0070688_100008984 3300005365 Bacteria 5445
29 Ga0070688_100071068 3300005365 Bacteria 2227
30 Ga0070667_100007642 3300005367 Bacteria 8967
31 Ga0070700_100000458 3300005441 Bacteria 20472
32 Ga0070700_100012319 3300005441 Unclassified 4767
33 Ga0070700_100108172 3300005441 Bacteria 1844
34 Ga0070694_100029439 3300005444 Bacteria 3584
35 Ga0070694_100231186 3300005444 Bacteria 1391
36 Ga0070663_100015175 3300005455 Bacteria 4964
37 Ga0070663_100300732 3300005455 Bacteria 1284
38 Ga0070678_100002670 3300005456 Bacteria 9826
39 Ga0070678_100027134 3300005456 Bacteria 3884
40 Ga0070662_100006913 3300005457 Bacteria 7344
41 Ga0070662_100079618 3300005457 Bacteria 2437
42 Ga0068867_100000583 3300005459 Bacteria 24188
43 Ga0068867_100004392 3300005459 Bacteria 9919
44 Ga0070685_10095397 3300005466 Bacteria 1808
45 Ga0070672_100003109 3300005543 Bacteria 10710
46 Ga0070695_100221315 3300005545 Bacteria 1364
47 Ga0070696_100078469 3300005546 Bacteria 2335
48 Ga0070665_100007995 3300005548 Bacteria 10710
49 Ga0070665_100384977 3300005548 Unclassified 1410
50 Ga0070664_100014009 3300005564 Bacteria 6539
51 Ga0068856_100307517 3300005614 Bacteria 1603
52 Ga0070702_100081953 3300005615 Bacteria 1935
53 Ga0068852_100001897 3300005616 Bacteria 14225
54 Ga0068859_100157506 3300005617 Bacteria 2349
55 Ga0068859_100200929 3300005617 Bacteria 2078
56 Ga0068861_100020093 3300005719 Bacteria 4778
57 Ga0068861_100032498 3300005719 Bacteria 3841
58 Ga0068851_10001538 3300005834 Bacteria 10114
59 Ga0068870_10012821 3300005840 Bacteria 3924
60 Ga0068870_10016391 3300005840 Bacteria 3539
61 Ga0068870_10036707 3300005840 Bacteria 2522
62 Ga0068863_100006205 3300005841 Bacteria 11726
63 Ga0068860_100327921 3300005843 Unclassified 1503
64 Ga0068860_100335337 3300005843 Bacteria 1486
65 Ga0068862_100001256 3300005844 Bacteria 23841
66 Ga0068862_100049509 3300005844 Unclassified 3589
67 Ga0068862_100295561 3300005844 Bacteria 1489
68 Ga0081455_10005143 3300005937 Bacteria 14413
69 Ga0081540_1002489 3300005983 Bacteria 14994
70 Ga0081539_10000050 3300005985 Bacteria 269342
71 Ga0081539_10179715 3300005985 Bacteria 993
72 Ga0097621_100002354 3300006237 Bacteria 12960
73 Ga0068871_100005270 3300006358 Bacteria 9052
74 Ga0075428_100002841 3300006844 Bacteria 18885
75 Ga0075428_100005531 3300006844 Bacteria 14055
76 Ga0075428_100023552 3300006844 Bacteria 6816
77 Ga0075428_100040642 3300006844 Bacteria 5115
78 Ga0075428_100064500 3300006844 Bacteria 4011
79 Ga0075428_100179216 3300006844 Bacteria 2294
80 Ga0075428_100308126 3300006844 Bacteria 1702
81 Ga0075430_100000728 3300006846 Bacteria 25208
82 Ga0075430_100001985 3300006846 Bacteria 16850
83 Ga0075430_100003624 3300006846 Bacteria 12948
84 Ga0075430_100025470 3300006846 Bacteria 5032
85 Ga0075430_100131419 3300006846 Bacteria 2086
86 Ga0075430_100136576 3300006846 Bacteria 2043
87 Ga0075430_100158513 3300006846 Unclassified 1884
88 Ga0075431_100000271 3300006847 Bacteria 40085
89 Ga0075431_100001571 3300006847 Bacteria 21219
90 Ga0075431_100003341 3300006847 Bacteria 15543
91 Ga0075431_100005638 3300006847 Bacteria 12368
92 Ga0075431_100046644 3300006847 Bacteria 4469
93 Ga0075431_100126185 3300006847 Bacteria 2640
94 Ga0075431_100169659 3300006847 Bacteria 2242
95 Ga0075431_100208047 3300006847 Bacteria 2000
96 Ga0075433_10000251 3300006852 Bacteria 31061
97 Ga0075433_10137585 3300006852 Bacteria 2171
98 Ga0075429_100001053 3300006880 Bacteria 22024
99 Ga0075429_100001534 3300006880 Bacteria 18955
100 Ga0075429_100007716 3300006880 Bacteria 9339
101 Ga0075429_100027890 3300006880 Bacteria 4902
102 Ga0068865_100002553 3300006881 Bacteria 10796
103 Ga0097620_100157505 3300006931 Bacteria 2349
104 Ga0097620_100200920 3300006931 Bacteria 2078
105 Ga0111539_10007388 3300009094 Bacteria 14075
106 Ga0111539_10117152 3300009094 Bacteria 3123
107 Ga0111539_10160834 3300009094 Bacteria 2626
108 Ga0105247_10133185 3300009101 Bacteria 1622
109 Ga0114129_10000312 3300009147 Bacteria 56790
110 Ga0114129_10000499 3300009147 Bacteria 47675
111 Ga0114129_10000845 3300009147 Bacteria 39637
112 Ga0114129_10005983 3300009147 Bacteria 17232
113 Ga0114129_10008489 3300009147 Bacteria 14639
114 Ga0114129_10123621 3300009147 Bacteria 3559
115 Ga0114129_10263682 3300009147 Bacteria 2308
116 Ga0114129_10646938 3300009147 Bacteria 1365
117 Ga0105243_10000400 3300009148 Bacteria 45768
118 Ga0105243_10002555 3300009148 Bacteria 15209
119 Ga0105243_10349920 3300009148 Bacteria 1356
120 Ga0105242_10220953 3300009176 Bacteria 1693
121 Ga0105248_10013696 3300009177 Bacteria 8927
122 Ga0105248_10034200 3300009177 Bacteria 5682
123 Ga0105238_10124583 3300009551 Bacteria 2556
124 Ga0105249_10013335 3300009553 Bacteria 7258
125 Ga0105249_10019749 3300009553 Bacteria 6016
126 Ga0105028_101271 3300009993 Bacteria 2660
127 Ga0157374_10165976 3300013296 Bacteria 2152
128 Ga0157374_10325113 3300013296 Bacteria 1525
129 Ga0157374_10424115 3300013296 Bacteria 1329
130 Ga0157378_10073551 3300013297 Bacteria 3073
131 Ga0157378_10351836 3300013297 Bacteria 1439
132 Ga0163162_10069186 3300013306 Bacteria 3582
133 Ga0163162_10493026 3300013306 Bacteria 1356
134 Ga0157375_10000362 3300013308 Bacteria 41418
135 Ga0157380_10007465 3300014326 Bacteria 7762
136 Ga0157379_10022481 3300014968 Bacteria 5586
137 Ga0157379_10384289 3300014968 Bacteria 1288
138 Ga0157376_10004202 3300014969 Bacteria 9991
139 Ga0157376_10077247 3300014969 Bacteria 2848
140 Ga0157376_10185048 3300014969 Bacteria 1906
141 Ga0163161_10025690 3300017792 Bacteria 4170
142 Ga0209676_1000071 3300025292 Bacteria 309464
143 Ga0209676_1000174 3300025292 Bacteria 153292
144 Ga0209676_1000543 3300025292 Bacteria 58059
145 Ga0209758_1018148 3300025297 Bacteria 3466
146 Ga0209050_1001746 3300025298 Bacteria 21622
147 Ga0209050_1013823 3300025298 Bacteria 3545
148 Ga0209050_1014375 3300025298 Bacteria 3414
149 Ga0209051_1000261 3300025303 Bacteria 87969
150 Ga0209257_1001152 3300025304 Bacteria 33656
151 Ga0207697_10004962 3300025315 Bacteria 6273
152 Ga0207697_10017040 3300025315 Bacteria 2988
153 Ga0207682_10009569 3300025893 Bacteria 3821
154 Ga0207688_10000481 3300025901 Bacteria 19121
155 Ga0207680_10011293 3300025903 Bacteria 4508
156 Ga0207645_10000063 3300025907 Bacteria 76658
157 Ga0207645_10008392 3300025907 Bacteria 7206
158 Ga0207643_10000847 3300025908 Bacteria 18546
159 Ga0207643_10018691 3300025908 Bacteria 3795
160 Ga0207643_10102577 3300025908 Bacteria 1678
161 Ga0207662_10008492 3300025918 Bacteria 5624
162 Ga0207681_10013840 3300025923 Bacteria 4997
163 Ga0207681_10191085 3300025923 Bacteria 1566
164 Ga0207659_10008029 3300025926 Bacteria 6531
165 Ga0207659_10106727 3300025926 Bacteria 2121
166 Ga0207687_10003350 3300025927 Bacteria 10829
167 Ga0207706_10373274 3300025933 Bacteria 1238
168 Ga0207709_10000038 3300025935 Bacteria 266638
169 Ga0207709_10000816 3300025935 Bacteria 24126
170 Ga0207669_10024666 3300025937 Bacteria 3236
171 Ga0207704_10003563 3300025938 Bacteria 7071
172 Ga0207704_10055905 3300025938 Unclassified 2414
173 Ga0207691_10007232 3300025940 Bacteria 10710
174 Ga0207711_10065239 3300025941 Bacteria 3147
175 Ga0207689_10005559 3300025942 Bacteria 11254
176 Ga0207689_10029926 3300025942 Bacteria 4541
177 Ga0207689_10201741 3300025942 Bacteria 1642
178 Ga0207661_10012669 3300025944 Bacteria 6138
179 Ga0207679_10003089 3300025945 Bacteria 10307
180 Ga0207651_10010676 3300025960 Bacteria 5102
181 Ga0207712_10010973 3300025961 Bacteria 5765
182 Ga0207712_10034265 3300025961 Bacteria 3440
183 Ga0207658_10019357 3300025986 Bacteria 4707
184 Ga0207677_10165272 3300026023 Bacteria 1724
185 Ga0207703_10177664 3300026035 Unclassified 1877
186 Ga0207639_10395399 3300026041 Bacteria 1244
187 Ga0207678_10001056 3300026067 Bacteria 25189
188 Ga0207678_10038386 3300026067 Bacteria 4161
189 Ga0207708_10000595 3300026075 Bacteria 27822
190 Ga0207708_10011158 3300026075 Bacteria 6684
191 Ga0207708_10058575 3300026075 Bacteria 2939
192 Ga0207708_10061886 3300026075 Bacteria 2858
193 Ga0207641_10024519 3300026088 Bacteria 4972
194 Ga0207648_10000238 3300026089 Bacteria 59053
195 Ga0207648_10005234 3300026089 Bacteria 13114
196 Ga0207648_10017189 3300026089 Bacteria 6591
197 Ga0207676_10042887 3300026095 Bacteria 3480
198 Ga0207675_100007878 3300026118 Bacteria 10050
199 Ga0207675_100044732 3300026118 Unclassified 4138
200 Ga0207675_100437306 3300026118 Bacteria 1294
201 Ga0207683_10012139 3300026121 Bacteria 7355
202 Ga0207683_10026835 3300026121 Unclassified 4975
203 Ga0209996_1006989 3300027395 Bacteria 1467
204 Ga0210000_1001647 3300027462 Bacteria 3151
205 Ga0209968_1014051 3300027526 Bacteria 1260
206 Ga0207428_10000756 3300027907 Bacteria 36837
207 Ga0207428_10019549 3300027907 Bacteria 5771
208 Ga0268266_10075371 3300028379 Bacteria 2930
209 Ga0268266_10575048 3300028379 Unclassified 1081
210 Ga0268265_10000459 3300028380 Bacteria 43185
211 Ga0268265_10048364 3300028380 Unclassified 3192
212 Ga0268265_10304524 3300028380 Bacteria 1436
213 Ga0268264_10531828 3300028381 Bacteria 1151
214 Ga0268264_10577716 3300028381 Bacteria 1105
215 Ga0265316_10159896 3300031344 Bacteria 1685
216 Ga0307408_100029850 3300031548 Bacteria 3781
217 Ga0307408_100202185 3300031548 Bacteria 1609
218 Ga0307413_10002337 3300031824 Bacteria 7697
219 Ga0307410_10006287 3300031852 Bacteria 6397
220 Ga0307410_10115040 3300031852 Bacteria 1952
221 Ga0307406_10000971 3300031901 Bacteria 16012
222 Ga0307406_10002915 3300031901 Bacteria 9322
223 Ga0307406_10010932 3300031901 Bacteria 5134
224 Ga0307407_10003902 3300031903 Bacteria 6224
225 Ga0307407_10022184 3300031903 Bacteria 3289
226 Ga0307407_10105244 3300031903 Bacteria 1760
227 Ga0307407_10137188 3300031903 Bacteria 1573
228 Ga0307412_10001705 3300031911 Bacteria 12152
229 Ga0307412_10009046 3300031911 Bacteria 5707
230 Ga0307409_100110224 3300031995 Bacteria 2306
231 Ga0307409_100161834 3300031995 Bacteria 1958
232 Ga0307416_100006044 3300032002 Bacteria 7535
233 Ga0307416_100023506 3300032002 Bacteria 4474
234 Ga0307416_100363867 3300032002 Bacteria 1470
235 Ga0307411_10017901 3300032005 Bacteria 4052
236 Ga0307411_10065816 3300032005 Bacteria 2432
237 Ga0307415_100013393 3300032126 Bacteria 4787
238 Ga0307415_100075770 3300032126 Bacteria 2382
239 Ga0373932_0006789 3300035112 Unclassified 2716
240 Ga0373960_0002333 3300035121 Bacteria 4270
241 Ga0373931_0000014 3300035691 Bacteria 251374
242 Ga0373931_0094500 3300035691 Bacteria 1671
243 Ga0451793_0779176 3300041452 Bacteria 5728
244 Ga0451797_0425014 3300041453 Bacteria 4974
245 Ga0451807_0031973 3300041486 Bacteria 4451
246 Ga0451843_1269521 3300041509 Bacteria 2592
247 Ga0450906_003001 3300042145 Archaea 3663
248 Ga0439460_0001266 3300042461 Bacteria 5947
249 Ga0450893_0012019 3300042532 Bacteria 1435
250 Ga0466965_0074898 3300044683 Bacteria 1706
251 Ga0451576_0065594 3300045051 Unclassified 3780
252 Ga0466967_0024743 3300045976 Bacteria 4941
253 Ga0495584_0080825 3300046491 Bacteria 1636
254 Ga0495598_0083517 3300046537 Bacteria 1029
255 Ga0495625_0000655 3300046660 Bacteria 49468
256 Ga0495660_0111953 3300046810 Bacteria 1392
257 Ga0495676_0123868 3300047321 Unclassified 1876
258 Ga0496108_0123068 3300048911 Bacteria 2226
259 Ga0496108_0178417 3300048911 Bacteria 1839
260 Ga0496109_0074042 3300048912 Bacteria 3130
261 Ga0496109_0370600 3300048912 Bacteria 1353
262 Ga0496112_0404500 3300048915 Bacteria 1305
263 Ga0496113_0012926 3300048916 Bacteria 5631
264 Ga0496114_0280400 3300048917 Bacteria 1469
265 Ga0496115_0318289 3300048918 Unclassified 1273
266 Ga0496119_0051359 3300048922 Bacteria 2534
267 Ga0496120_0023591 3300048923 Bacteria 3849
268 Ga0496125_0112907 3300048928 Bacteria 1962
269 Ga0501291_016305 3300049514 Archaea 1133
270 Ga0501032_0030879 3300049569 Bacteria 3675
271 Ga0501032_0169645 3300049569 Bacteria 1431
272 Ga0501032_0201221 3300049569 Bacteria 1300
273 Ga0501034_0139585 3300049571 Bacteria 2404
274 Ga0501036_0038279 3300049572 Bacteria 4059
275 Ga0501036_0063204 3300049572 Bacteria 3135
276 Ga0501037_0079272 3300049573 Bacteria 2384
277 Ga0501037_0216669 3300049573 Bacteria 1348
278 Ga0501038_0114924 3300049574 Bacteria 2225
279 Ga0501039_0021485 3300049575 Bacteria 4950
280 Ga0501039_0136768 3300049575 Bacteria 1924
281 Ga0501040_0000370 3300049576 Bacteria 26592
282 Ga0501040_0043306 3300049576 Bacteria 3068
283 Ga0501040_0079773 3300049576 Bacteria 2266
284 Ga0501040_0208004 3300049576 Bacteria 1390
285 Ga0501041_0026609 3300049577 Bacteria 3480
286 Ga0501042_0000212 3300049578 Bacteria 27705
287 Ga0501042_0023262 3300049578 Bacteria 4334
288 Ga0501042_0100030 3300049578 Bacteria 2084
289 Ga0501043_0014812 3300049579 Bacteria 6106
290 Ga0501046_0010396 3300049580 Bacteria 7995
291 Ga0501048_0011389 3300049582 Bacteria 6632
292 Ga0501068_0019620 3300049584 Bacteria 3929
293 Ga0501071_0006198 3300049587 Bacteria 7756
294 Ga0501071_0360636 3300049587 Bacteria 1107
295 Ga0501072_0011274 3300049588 Bacteria 6825
296 Ga0501072_0098841 3300049588 Bacteria 2320
297 Ga0501072_0133672 3300049588 Bacteria 1978
298 Ga0501075_0036389 3300049591 Bacteria 3674
299 Ga0501075_0055146 3300049591 Bacteria 2990
300 Ga0501076_0031389 3300049592 Bacteria 4142
301 Ga0501076_0227977 3300049592 Bacteria 1523
302 Ga0501077_0002360 3300049593 Bacteria 11364
303 Ga0501079_0045354 3300049741 Bacteria 3392
304 Ga0501080_0118892 3300049742 Bacteria 2450
305 Ga0501080_0237797 3300049742 Bacteria 1663
306 Ga0501081_0107487 3300049743 Bacteria 1978
307 Ga0501083_0195347 3300049744 Bacteria 1320
308 Ga0501035_0145593 3300049822 Bacteria 2058
309 Ga0501045_0030005 3300049824 Bacteria 3933
310 Ga0501045_0087469 3300049824 Bacteria 2301
311 nmdc:mga00v17_144022_c1 3300050491 Bacteria 1529
312 nmdc:mga05p37_141432_c1 3300050507 Bacteria 2948
313 nmdc:mga05p37_1471_c1 3300050507 Bacteria 27351
314 nmdc:mga05p37_17715_c1 3300050507 Bacteria 8594
315 nmdc:mga05p37_3275_c1 3300050507 Bacteria 18870
316 nmdc:mga05p37_9189_c1 3300050507 Bacteria 11684
317 nmdc:mga09592_14551_c1 3300050508 Bacteria 6421
318 nmdc:mga09592_2067_c1 3300050508 Bacteria 16182
319 nmdc:mga09592_41557_c1 3300050508 Unclassified 3866
320 nmdc:mga09592_846_c1 3300050508 Bacteria 23790
321 nmdc:mga0qj67_1486_c1 3300050509 Bacteria 16424
322 nmdc:mga0qj67_162066_c1 3300050509 Unclassified 1815
323 nmdc:mga0qj67_2233_c1 3300050509 Bacteria 13757
324 nmdc:mga0qj67_26848_c1 3300050509 Bacteria 4459
325 nmdc:mga0qj67_45707_c1 3300050509 Bacteria 3455
326 nmdc:mga0qj67_459555_c1 3300050509 Bacteria 1025
327 nmdc:mga06r32_13577_c1 3300050510 Bacteria 7384
328 nmdc:mga06r32_169785_c1 3300050510 Bacteria 2165
329 nmdc:mga06r32_232323_c1 3300050510 Bacteria 1832
330 nmdc:mga06r32_340_c1 3300050510 Bacteria 38961
331 nmdc:mga06r32_382327_c1 3300050510 Bacteria 1391
332 nmdc:mga06r32_38264_c1 3300050510 Bacteria 4543
333 nmdc:mga08y16_39671_c1 3300050511 Bacteria 4940
334 nmdc:mga08y16_42562_c1 3300050511 Unclassified 4757
335 nmdc:mga0a205_29999_c1 3300050515 Bacteria 5205
336 nmdc:mga0a205_3668_c1 3300050515 Bacteria 13758
337 Ga0495595_0045897 3300053084 Bacteria 2011
338 Ga0501084_0031760 3300054114 Bacteria 4415
339 Ga0501084_0089894 3300054114 Bacteria 2578
340 Ga0501082_0033572 3300060353 Bacteria 4427
341 Ga0530510_0011993 3300061734 Bacteria 6079
342 2852684820 2852680915 Bacteria 4100189
343 2894240692 2894232714 Bacteria 8834183
344 3005415724 3005409236 Bacteria 7188837
345 Ga0163162_10218287
346 Ga0055536_1000258
347 Ga0055536_1000336
348 Ga0055531_10003789
349 Ga0065707_10121529
350 Ga0070676_10001578
351 Ga0070683_100040994
352 Ga0070677_10000682
353 Ga0068869_100008299
354 Ga0068869_100011567
355 Ga0068869_100130968
356 Ga0068869_100158011
357 Ga0070682_100041047
358 Ga0068868_100001824
359 Ga0068868_100037797
360 Ga0070691_10167106
361 Ga0070687_100035336
362 Ga0070692_10007464
363 Ga0070668_100007976
364 Ga0070669_100003449
365 Ga0070669_100010750
366 Ga0070675_100004292
367 Ga0070675_100106432
368 Ga0070675_100225050
369 Ga0070671_100034247
370 Ga0070674_100000170
371 Ga0070673_100001911
372 Ga0070688_100008984
373 Ga0070688_100071068
374 Ga0070667_100007642
375 Ga0070700_100000458
376 Ga0070700_100012319
377 Ga0070700_100108172
378 Ga0070694_100029439
379 Ga0070694_100231186
380 Ga0070663_100015175
381 Ga0070663_100300732
382 Ga0070678_100002670
383 Ga0070678_100027134
384 Ga0070662_100006913
385 Ga0070662_100079618
386 Ga0068867_100000583
387 Ga0068867_100004392
388 Ga0070685_10095397
389 Ga0070672_100003109
390 Ga0070695_100221315
391 Ga0070696_100078469
392 Ga0070665_100007995
393 Ga0070665_100384977
394 Ga0070664_100014009
395 Ga0068856_100307517
396 Ga0070702_100081953
397 Ga0068852_100001897
398 Ga0068859_100157506
399 Ga0068859_100200929
400 Ga0068861_100020093
401 Ga0068861_100032498
402 Ga0068851_10001538
403 Ga0068870_10012821
404 Ga0068870_10016391
405 Ga0068870_10036707
406 Ga0068863_100006205
407 Ga0068860_100327921
408 Ga0068860_100335337
409 Ga0068862_100001256
410 Ga0068862_100049509
411 Ga0068862_100295561
412 Ga0081455_10005143
413 Ga0081540_1002489
414 Ga0081539_10000050
415 Ga0081539_10179715
416 Ga0097621_100002354
417 Ga0068871_100005270
418 Ga0075428_100002841
419 Ga0075428_100005531
420 Ga0075428_100023552
421 Ga0075428_100040642
422 Ga0075428_100064500
423 Ga0075428_100179216
424 Ga0075428_100308126
425 Ga0075430_100000728
426 Ga0075430_100001985
427 Ga0075430_100003624
428 Ga0075430_100025470
429 Ga0075430_100131419
430 Ga0075430_100136576
431 Ga0075430_100158513
432 Ga0075431_100000271
433 Ga0075431_100001571
434 Ga0075431_100003341
435 Ga0075431_100005638
436 Ga0075431_100046644
437 Ga0075431_100126185
438 Ga0075431_100169659
439 Ga0075431_100208047
440 Ga0075433_10000251
441 Ga0075433_10137585
442 Ga0075429_100001053
443 Ga0075429_100001534
444 Ga0075429_100007716
445 Ga0075429_100027890
446 Ga0068865_100002553
447 Ga0097620_100157505
448 Ga0097620_100200920
449 Ga0111539_10007388
450 Ga0111539_10117152
451 Ga0111539_10160834
452 Ga0105247_10133185
453 Ga0114129_10000312
454 Ga0114129_10000499
455 Ga0114129_10000845
456 Ga0114129_10005983
457 Ga0114129_10008489
458 Ga0114129_10123621
459 Ga0114129_10263682
460 Ga0114129_10646938
461 Ga0105243_10000400
462 Ga0105243_10002555
463 Ga0105243_10349920
464 Ga0105242_10220953
465 Ga0105248_10013696
466 Ga0105248_10034200
467 Ga0105238_10124583
468 Ga0105249_10013335
469 Ga0105249_10019749
470 Ga0105028_101271
471 Ga0157374_10165976
472 Ga0157374_10325113
473 Ga0157374_10424115
474 Ga0157378_10073551
475 Ga0157378_10351836
476 Ga0163162_10069186
477 Ga0163162_10493026
478 Ga0157375_10000362
479 Ga0157380_10007465
480 Ga0157379_10022481
481 Ga0157379_10384289
482 Ga0157376_10004202
483 Ga0157376_10077247
484 Ga0157376_10185048
485 Ga0163161_10025690
486 Ga0209676_1000071
487 Ga0209676_1000174
488 Ga0209676_1000543
489 Ga0209758_1018148
490 Ga0209050_1001746
491 Ga0209050_1013823
492 Ga0209050_1014375
493 Ga0209051_1000261
494 Ga0209257_1001152
495 Ga0207697_10004962
496 Ga0207697_10017040
497 Ga0207682_10009569
498 Ga0207688_10000481
499 Ga0207680_10011293
500 Ga0207645_10000063
501 Ga0207645_10008392
502 Ga0207643_10000847
503 Ga0207643_10018691
504 Ga0207643_10102577
505 Ga0207662_10008492
506 Ga0207681_10013840
507 Ga0207681_10191085
508 Ga0207659_10008029
509 Ga0207659_10106727
510 Ga0207687_10003350
511 Ga0207706_10373274
512 Ga0207709_10000038
513 Ga0207709_10000816
514 Ga0207669_10024666
515 Ga0207704_10003563
516 Ga0207704_10055905
517 Ga0207691_10007232
518 Ga0207711_10065239
519 Ga0207689_10005559
520 Ga0207689_10029926
521 Ga0207689_10201741
522 Ga0207661_10012669
523 Ga0207679_10003089
524 Ga0207651_10010676
525 Ga0207712_10010973
526 Ga0207712_10034265
527 Ga0207658_10019357
528 Ga0207677_10165272
529 Ga0207703_10177664
530 Ga0207639_10395399
531 Ga0207678_10001056
532 Ga0207678_10038386
533 Ga0207708_10000595
534 Ga0207708_10011158
535 Ga0207708_10058575
536 Ga0207708_10061886
537 Ga0207641_10024519
538 Ga0207648_10000238
539 Ga0207648_10005234
540 Ga0207648_10017189
541 Ga0207676_10042887
542 Ga0207675_100007878
543 Ga0207675_100044732
544 Ga0207675_100437306
545 Ga0207683_10012139
546 Ga0207683_10026835
547 Ga0209996_1006989
548 Ga0210000_1001647
549 Ga0209968_1014051
550 Ga0207428_10000756
551 Ga0207428_10019549
552 Ga0268266_10075371
553 Ga0268266_10575048
554 Ga0268265_10000459
555 Ga0268265_10048364
556 Ga0268265_10304524
557 Ga0268264_10531828
558 Ga0268264_10577716
559 Ga0265316_10159896
560 Ga0307408_100029850
561 Ga0307408_100202185
562 Ga0307413_10002337
563 Ga0307410_10006287
564 Ga0307410_10115040
565 Ga0307406_10000971
566 Ga0307406_10002915
567 Ga0307406_10010932
568 Ga0307407_10003902
569 Ga0307407_10022184
570 Ga0307407_10105244
571 Ga0307407_10137188
572 Ga0307412_10001705
573 Ga0307412_10009046
574 Ga0307409_100110224
575 Ga0307409_100161834
576 Ga0307416_100006044
577 Ga0307416_100023506
578 Ga0307416_100363867
579 Ga0307411_10017901
580 Ga0307411_10065816
581 Ga0307415_100013393
582 Ga0307415_100075770
583 Ga0373932_0006789
584 Ga0373960_0002333
585 Ga0373931_0000014
586 Ga0373931_0094500
587 Ga0451793_0779176
588 Ga0451797_0425014
589 Ga0451807_0031973
590 Ga0451843_1269521
591 Ga0450906_003001
592 Ga0439460_0001266
593 Ga0450893_0012019
594 Ga0466965_0074898
595 Ga0451576_0065594
596 Ga0466967_0024743
597 Ga0495584_0080825
598 Ga0495598_0083517
599 Ga0495625_0000655
600 Ga0495660_0111953
601 Ga0495676_0123868
602 Ga0496108_0123068
603 Ga0496108_0178417
604 Ga0496109_0074042
605 Ga0496109_0370600
606 Ga0496112_0404500
607 Ga0496113_0012926
608 Ga0496114_0280400
609 Ga0496115_0318289
610 Ga0496119_0051359
611 Ga0496120_0023591
612 Ga0496125_0112907
613 Ga0501291_016305
614 Ga0501032_0030879
615 Ga0501032_0169645
616 Ga0501032_0201221
617 Ga0501034_0139585
618 Ga0501036_0038279
619 Ga0501036_0063204
620 Ga0501037_0079272
621 Ga0501037_0216669
622 Ga0501038_0114924
623 Ga0501039_0021485
624 Ga0501039_0136768
625 Ga0501040_0000370
626 Ga0501040_0043306
627 Ga0501040_0079773
628 Ga0501040_0208004
629 Ga0501041_0026609
630 Ga0501042_0000212
631 Ga0501042_0023262
632 Ga0501042_0100030
633 Ga0501043_0014812
634 Ga0501046_0010396
635 Ga0501048_0011389
636 Ga0501068_0019620
637 Ga0501071_0006198
638 Ga0501071_0360636
639 Ga0501072_0011274
640 Ga0501072_0098841
641 Ga0501072_0133672
642 Ga0501075_0036389
643 Ga0501075_0055146
644 Ga0501076_0031389
645 Ga0501076_0227977
646 Ga0501077_0002360
647 Ga0501079_0045354
648 Ga0501080_0118892
649 Ga0501080_0237797
650 Ga0501081_0107487
651 Ga0501083_0195347
652 Ga0501035_0145593
653 Ga0501045_0030005
654 Ga0501045_0087469
655 nmdc:mga00v17_144022_c1
656 nmdc:mga05p37_141432_c1
657 nmdc:mga05p37_1471_c1
658 nmdc:mga05p37_17715_c1
659 nmdc:mga05p37_3275_c1
660 nmdc:mga05p37_9189_c1
661 nmdc:mga09592_14551_c1
662 nmdc:mga09592_2067_c1
663 nmdc:mga09592_41557_c1
664 nmdc:mga09592_846_c1
665 nmdc:mga0qj67_1486_c1
666 nmdc:mga0qj67_162066_c1
667 nmdc:mga0qj67_2233_c1
668 nmdc:mga0qj67_26848_c1
669 nmdc:mga0qj67_45707_c1
670 nmdc:mga0qj67_459555_c1
671 nmdc:mga06r32_13577_c1
672 nmdc:mga06r32_169785_c1
673 nmdc:mga06r32_232323_c1
674 nmdc:mga06r32_340_c1
675 nmdc:mga06r32_382327_c1
676 nmdc:mga06r32_38264_c1
677 nmdc:mga08y16_39671_c1
678 nmdc:mga08y16_42562_c1
679 nmdc:mga0a205_29999_c1
680 nmdc:mga0a205_3668_c1
681 Ga0495595_0045897
682 Ga0501084_0031760
683 Ga0501084_0089894
684 Ga0501082_0033572
685 Ga0530510_0011993
686 2852684820
687 2894240692
688 3005415724

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02574

S-methyl_trans

Homocysteine S-methyltransferase

47

342

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
1q8a-assembly2.cif.gz_B cobalamin-dependent methionine synthase (1-566) from thermotoga maritima (cd2+:l-hcy complex, se-met) 0.8446 1 312
1q7q-assembly1.cif.gz_A cobalamin-dependent methionine synthase (1-566) from t. maritima (oxidized, orthorhombic) 0.8406 1 312
3bof-assembly1.cif.gz_B cobalamin-dependent methionine synthase (1-566) from thermotoga maritima complexed with zn2+ and homocysteine 0.8349 11 312
3bol-assembly1.cif.gz_B cobalamin-dependent methionine synthase (1-566) from thermotoga maritima complexed with zn2+ 0.829 11 312
1q8j-assembly2.cif.gz_B cobalamin-dependent methionine synthase (1-566) from thermotoga maritima (cd2+, hcy, methyltetrahydrofolate complex) 0.8239 1 312
ID Description Score Start End Superfamily
1q85B01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Homocysteine-binding-like domain 0.8217 11 312 3.20.20.330
5dmlA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Homocysteine-binding-like domain 0.8135 12 310 3.20.20.330
af_O53185_2_293_3.20.20.330 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Homocysteine-binding-like domain 0.8102 10 309 3.20.20.330
af_Q10PU4_5_279_3.20.20.330 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Homocysteine-binding-like domain 0.8087 17 237 3.20.20.330
af_O33259_8_324_3.20.20.330 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Homocysteine-binding-like domain 0.8052 10 313 3.20.20.330
ID Description Score Start End GO Terms
AF-S2LCX1-F1-model_v4 Hcy-binding domain-containing protein 0.9886 1 312 GO:0008168
GO:0032259
GO:0046872
AF-A0A1H9WQJ0-F1-model_v4 Homocysteine S-methyltransferase 0.9878 138 311 GO:0008168
GO:0032259
GO:0046872
AF-A0A291P3H4-F1-model_v4 Homocysteine S-methyltransferase 0.9877 1 314 GO:0008168
GO:0032259
GO:0046872
AF-A0A7V8HDK0-F1-model_v4 deleted 0.9869 1 236
AF-A0A3A3G7X2-F1-model_v4 Homocysteine S-methyltransferase 0.9851 32 311 GO:0008168
GO:0032259
GO:0046872

Map