F416012

General Info

Members Datasets Scaffolds Average Seq Length
344 261 292 233

Family's Representative Sequence

Representative Sequence 3300028786|Ga0307517_10027850|Ga0307517_100278502
Length 267
Sequence MHLLALLCKSPFSTPPLATIGRVCANIMIAEDDAKQAELVRRYLEHEGHTVTVVEDGRAALDEVRRGEPDLLVLDVMMPRTDGLDVVRILRAECREVPVLMLTARSTEDDLLLGLDLGADDYMTKPFSPRELMARVRTLLRRNRRPASGAGAGDAGGNGTLSVGTLRVDPARHEVSVGGTPVVCTPGEFRILAAMATEPDRVFTRKQLLEELHGFDKYITNRTVDVHIMHLRKKIERAPRRPDRLLTVFGVGYKLTDPAKNGRHAST

Samples

Sample ID Description Type Environment
1 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
2 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
3 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
4 2643221548 Streptomyces sp. Root55 Isolate Unclassified
5 2643221578 Streptomyces sp. Root63 Isolate Unclassified
6 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
7 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
8 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
9 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
10 2643221714 Streptomyces sp. Root264 Isolate Unclassified
11 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
12 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
13 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
14 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
15 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
16 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
17 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
18 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
19 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
20 2858882152 Micromonospora noduli MED15 Isolate Nodule
21 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
22 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
23 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
24 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
25 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
26 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
27 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
28 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
29 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
30 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
31 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
32 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
33 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
34 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
35 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
36 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
37 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
38 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
39 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
40 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
41 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
42 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
43 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
44 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
45 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
46 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
47 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
48 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
49 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
50 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
51 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
52 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
53 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
54 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
55 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
56 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
57 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
58 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
59 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
60 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
61 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
62 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
63 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
64 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
65 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
66 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
67 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
68 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
69 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
70 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
71 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
72 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
73 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
74 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
75 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
76 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
77 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
78 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
80 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
81 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
82 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
86 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
87 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
88 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
89 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
107 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
113 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
114 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
115 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
116 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
117 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
118 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
119 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
122 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
123 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
124 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
125 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
126 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
135 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
136 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
137 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
138 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
139 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
140 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
143 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
144 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
145 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
146 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
147 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
148 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
149 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
150 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
151 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
152 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
153 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
154 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
155 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
156 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
157 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
158 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
159 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
160 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
161 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
162 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
163 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
164 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
165 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
166 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
167 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
168 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
169 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
170 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
171 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
172 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
173 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
176 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
177 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
178 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
179 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
180 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
181 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
182 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
183 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
184 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
185 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
188 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
189 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
190 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
191 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
192 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
193 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
194 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
195 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
196 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
197 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
198 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
199 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
200 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
201 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
202 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
204 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
205 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
209 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
212 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
213 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
214 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
215 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
216 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
217 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
218 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
219 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
220 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
221 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
222 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
223 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
224 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
225 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
228 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
229 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
230 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
231 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
232 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
233 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
234 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
235 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
236 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
237 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
238 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
239 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
240 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
241 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
242 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
243 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
244 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
245 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
246 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
247 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
248 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
249 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
250 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
251 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
252 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
253 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
254 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
255 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
256 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
257 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
258 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
259 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
260 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
261 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.3
Metatranscriptomes 0.58
Isolates 15.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.81
Nodule 1.45
Rhizoplane 2.91
Rhizosphere 75.29
Stem 0
Stem Tuber 0
Unclassified 14.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1000083 3300000545 Bacteria 17763
2 JGI24743J22301_10035810 3300001991 Bacteria 987
3 rootH1_10021024 3300003316 Bacteria 2939
4 rootH1_10039915 3300003316 Bacteria 7098
5 Ga0065712_10182221 3300005290 Bacteria 1185
6 Ga0065715_10220248 3300005293 Bacteria 1255
7 Ga0065707_10093592 3300005295 Bacteria 3605
8 Ga0070683_100302809 3300005329 Bacteria 1521
9 Ga0070670_100025434 3300005331 Bacteria 5094
10 Ga0070691_10195819 3300005341 Bacteria 1059
11 Ga0070668_100000526 3300005347 Bacteria 25426
12 Ga0070668_100029648 3300005347 Bacteria 4157
13 Ga0070669_100116928 3300005353 Bacteria 2030
14 Ga0070671_100325879 3300005355 Bacteria 1309
15 Ga0070673_100359453 3300005364 Bacteria 1294
16 Ga0070673_100486282 3300005364 Bacteria 1115
17 Ga0070688_100575218 3300005365 Bacteria 859
18 Ga0070708_100019555 3300005445 Bacteria 5693
19 Ga0070708_100115998 3300005445 Bacteria 2466
20 Ga0070678_100423215 3300005456 Bacteria 1161
21 Ga0070707_100006105 3300005468 Bacteria 11236
22 Ga0070707_100097688 3300005468 Bacteria 2844
23 Ga0070698_100020082 3300005471 Bacteria 7003
24 Ga0070698_100129237 3300005471 Bacteria 2482
25 Ga0070698_100136661 3300005471 Bacteria 2405
26 Ga0070698_100194968 3300005471 Bacteria 1962
27 Ga0070699_100008837 3300005518 Bacteria 8724
28 Ga0070696_100051172 3300005546 Bacteria 2872
29 Ga0068859_100463621 3300005617 Bacteria 1363
30 Ga0068861_100114098 3300005719 Bacteria 2169
31 Ga0068858_100016731 3300005842 Bacteria 6887
32 Ga0068858_100758046 3300005842 Bacteria 946
33 Ga0068860_100049505 3300005843 Bacteria 4002
34 Ga0068862_100041335 3300005844 Bacteria 3922
35 Ga0068862_100248925 3300005844 Bacteria 1619
36 Ga0075363_100008938 3300006048 Bacteria 4690
37 Ga0075428_100023224 3300006844 Bacteria 6859
38 Ga0075428_100744188 3300006844 Bacteria 1043
39 Ga0075430_100002438 3300006846 Bacteria 15485
40 Ga0075431_100052255 3300006847 Bacteria 4213
41 Ga0075429_100001082 3300006880 Bacteria 21874
42 Ga0097620_100463605 3300006931 Bacteria 1363
43 Ga0111539_10018510 3300009094 Bacteria 8628
44 Ga0111539_10267865 3300009094 Bacteria 1989
45 Ga0105245_10281886 3300009098 Bacteria 1624
46 Ga0114129_10005530 3300009147 Bacteria 17875
47 Ga0114129_10727466 3300009147 Bacteria 1273
48 Ga0105242_10430611 3300009176 Bacteria 1238
49 Ga0105237_10305568 3300009545 Unclassified 1594
50 Ga0157378_10236009 3300013297 Bacteria 1745
51 Ga0157375_10506069 3300013308 Bacteria 1372
52 Ga0163163_10056640 3300014325 Bacteria 3874
53 Ga0163163_10142249 3300014325 Bacteria 2441
54 Ga0163163_10343611 3300014325 Bacteria 1548
55 Ga0157379_10010951 3300014968 Bacteria 7907
56 Ga0157379_10058245 3300014968 Bacteria 3453
57 Ga0183367_1003 3300015688 Bacteria 814276
58 Ga0213872_10032633 3300021361 Bacteria 2386
59 Ga0207697_10016905 3300025315 Bacteria 3002
60 Ga0207688_10005584 3300025901 Bacteria 6839
61 Ga0207699_10323191 3300025906 Bacteria 1083
62 Ga0207645_10204052 3300025907 Bacteria 1301
63 Ga0207684_10514460 3300025910 Bacteria 1026
64 Ga0207646_10018299 3300025922 Bacteria 6538
65 Ga0207646_10139924 3300025922 Bacteria 2179
66 Ga0207650_10090292 3300025925 Bacteria 2340
67 Ga0207686_10191970 3300025934 Bacteria 1457
68 Ga0207661_10166550 3300025944 Bacteria 1916
69 Ga0207668_10000229 3300025972 Bacteria 37572
70 Ga0207703_10022751 3300026035 Bacteria 4924
71 Ga0207675_100147215 3300026118 Bacteria 2240
72 Ga0207683_10203662 3300026121 Bacteria 1799
73 Ga0207698_10220407 3300026142 Bacteria 1714
74 Ga0207698_10655329 3300026142 Bacteria 1040
75 Ga0209998_10000659 3300027717 Bacteria 9231
76 Ga0268265_10048689 3300028380 Bacteria 3183
77 Ga0268265_10236079 3300028380 Bacteria 1610
78 Ga0268264_10122626 3300028381 Bacteria 2292
79 Ga0265334_10033241 3300028573 Bacteria 2054
80 Ga0307517_10027850 3300028786 Bacteria 6764
81 Ga0307515_10000476 3300028794 Bacteria 95453
82 Ga0307515_10029271 3300028794 Bacteria 9319
83 Ga0265329_10089619 3300031242 Bacteria 976
84 Ga0265316_10150751 3300031344 Bacteria 1742
85 Ga0265316_10271102 3300031344 Bacteria 1242
86 Ga0307513_10010334 3300031456 Bacteria 11705
87 Ga0307508_10031150 3300031616 Bacteria 4822
88 Ga0307508_10071877 3300031616 Bacteria 3034
89 Ga0307508_10133646 3300031616 Bacteria 2084
90 Ga0316575_10007397 3300031665 Bacteria 3976
91 Ga0265314_10002590 3300031711 Bacteria 18300
92 Ga0316578_10155561 3300031728 Bacteria 1378
93 Ga0307516_10035044 3300031730 Bacteria 5039
94 Ga0307516_10041601 3300031730 Bacteria 4566
95 Ga0307516_10070328 3300031730 Bacteria 3363
96 Ga0307516_10120016 3300031730 Bacteria 2421
97 Ga0307516_10183138 3300031730 Bacteria 1826
98 Ga0307405_10150192 3300031731 Bacteria 1637
99 Ga0307406_10762294 3300031901 Bacteria 813
100 Ga0307412_10535499 3300031911 Bacteria 981
101 Ga0307416_100078126 3300032002 Bacteria 2783
102 Ga0307416_100988414 3300032002 Bacteria 944
103 Ga0316583_10053222 3300032133 Bacteria 1424
104 Ga0316596_1077291 3300033541 Bacteria 893
105 Ga0373953_0175932 3300035117 Bacteria 922
106 Ga0316574_0002967 3300035398 Bacteria 8634
107 Ga0373937_0058826 3300036401 Bacteria 3531
108 Ga0316582_0008832 3300036647 Bacteria 5432
109 Ga0316582_0046049 3300036647 Bacteria 2749
110 Ga0316582_0080214 3300036647 Bacteria 2130
111 Ga0395900_0795276 3300037418 Bacteria 874
112 Ga0395898_0001337 3300037466 Bacteria 35615
113 Ga0395905_0719138 3300037471 Bacteria 901
114 Ga0400489_80565 3300039093 Bacteria 21621
115 Ga0436365_1621840 3300039437 Bacteria 885
116 Ga0436360_1026785 3300039438 Bacteria 4541
117 Ga0436361_0622658 3300039447 Bacteria 6130
118 Ga0436362_0445418 3300039453 Bacteria 5702
119 Ga0436362_1149967 3300039453 Bacteria 8085
120 Ga0451853_2164245 3300041512 Bacteria 3701
121 Ga0450910_012440 3300042147 Bacteria 1230
122 Ga0450918_033456 3300042531 Bacteria 911
123 Ga0466966_0105096 3300044684 Bacteria 1743
124 Ga0466961_0113071 3300044693 Bacteria 1707
125 Ga0466971_0021365 3300044719 Bacteria 2881
126 Ga0451576_0459802 3300045051 Bacteria 1336
127 Ga0451576_1077506 3300045051 Bacteria 841
128 Ga0466958_0108738 3300045836 Bacteria 1730
129 Ga0495617_019168 3300046452 Bacteria 2313
130 Ga0495603_0018419 3300046455 Bacteria 4224
131 Ga0495603_0026834 3300046455 Bacteria 3478
132 Ga0495629_0018029 3300046459 Bacteria 5059
133 Ga0495629_0024596 3300046459 Bacteria 4288
134 Ga0495651_0165346 3300046462 Bacteria 1581
135 Ga0495582_0192782 3300046473 Bacteria 1163
136 Ga0495605_0066051 3300046474 Bacteria 1719
137 Ga0495584_0184292 3300046491 Bacteria 1061
138 Ga0495585_0113420 3300046492 Bacteria 1439
139 Ga0495594_0011360 3300046499 Bacteria 4626
140 Ga0495594_0052126 3300046499 Bacteria 2252
141 Ga0495596_0065086 3300046500 Bacteria 1418
142 Ga0495607_0047609 3300046501 Bacteria 2511
143 Ga0495583_0149313 3300046506 Bacteria 969
144 Ga0495616_0016940 3300046513 Bacteria 4025
145 Ga0495620_0004771 3300046515 Bacteria 7625
146 Ga0495620_0022766 3300046515 Bacteria 3010
147 Ga0495631_0009429 3300046518 Bacteria 4879
148 Ga0495631_0039462 3300046518 Bacteria 2095
149 Ga0495643_0000900 3300046522 Bacteria 31491
150 Ga0495643_0010878 3300046522 Bacteria 5574
151 Ga0495648_0059098 3300046524 Bacteria 2289
152 Ga0495666_0014923 3300046526 Bacteria 3867
153 Ga0495597_0043686 3300046542 Bacteria 1995
154 Ga0495622_0111967 3300046557 Bacteria 1249
155 Ga0495622_0127198 3300046557 Bacteria 1161
156 Ga0495633_0022426 3300046558 Bacteria 3142
157 Ga0495633_0072096 3300046558 Bacteria 1611
158 Ga0495667_0277269 3300046559 Bacteria 1064
159 Ga0495634_0191158 3300046642 Bacteria 1277
160 Ga0495611_0005846 3300046648 Bacteria 5247
161 Ga0495611_0023643 3300046648 Bacteria 2668
162 Ga0495625_0018015 3300046660 Bacteria 5519
163 Ga0495625_0066370 3300046660 Bacteria 2541
164 Ga0495661_0112163 3300046665 Bacteria 1518
165 Ga0495661_0233639 3300046665 Bacteria 947
166 Ga0495588_0030251 3300046674 Bacteria 2721
167 Ga0495623_0215336 3300046679 Bacteria 1097
168 Ga0495658_0083807 3300046683 Bacteria 1876
169 Ga0495613_0003357 3300046689 Bacteria 11967
170 Ga0495613_0037290 3300046689 Bacteria 3604
171 Ga0495613_0095434 3300046689 Bacteria 2151
172 Ga0495670_0001737 3300046691 Bacteria 10728
173 Ga0495649_0021908 3300046694 Bacteria 3579
174 Ga0495649_0400038 3300046694 Bacteria 689
175 Ga0495589_0008699 3300046794 Bacteria 5287
176 Ga0495636_0003957 3300047318 Bacteria 5787
177 Ga0495676_0009072 3300047321 Bacteria 9072
178 Ga0495676_0185754 3300047321 Bacteria 1453
179 Ga0495683_0036684 3300047323 Bacteria 2488
180 Ga0495683_0172990 3300047323 Bacteria 991
181 Ga0495683_0180785 3300047323 Bacteria 963
182 Ga0495687_001046 3300047443 Bacteria 27481
183 Ga0495687_009158 3300047443 Bacteria 5571
184 Ga0495687_049336 3300047443 Bacteria 1799
185 Ga0495687_099604 3300047443 Bacteria 1093
186 Ga0495685_001564 3300047447 Bacteria 7041
187 Ga0495685_002848 3300047447 Bacteria 5459
188 Ga0495681_0006933 3300047470 Bacteria 7345
189 Ga0495684_0003697 3300047471 Bacteria 11927
190 Ga0495686_0031869 3300047472 Bacteria 3415
191 Ga0495686_0205884 3300047472 Bacteria 1127
192 Ga0495614_0021039 3300048089 Bacteria 2820
193 Ga0495614_0091327 3300048089 Bacteria 1325
194 Ga0495626_0008954 3300048091 Bacteria 5434
195 Ga0496101_0354733 3300048904 Bacteria 1153
196 Ga0496106_0032677 3300048909 Bacteria 3881
197 Ga0496107_0261787 3300048910 Bacteria 1287
198 Ga0496108_0182217 3300048911 Bacteria 1819
199 Ga0496109_0228416 3300048912 Bacteria 1750
200 Ga0496110_0275140 3300048913 Bacteria 1533
201 Ga0496110_0525104 3300048913 Bacteria 1077
202 Ga0496112_0643657 3300048915 Bacteria 990
203 Ga0496113_0020563 3300048916 Bacteria 4642
204 Ga0496114_0090310 3300048917 Bacteria 2600
205 Ga0496116_0058853 3300048919 Unclassified 2502
206 Ga0496116_0208820 3300048919 Bacteria 1014
207 Ga0496119_0059575 3300048922 Unclassified 2292
208 Ga0496120_0039003 3300048923 Unclassified 2807
209 Ga0496122_0034159 3300048925 Unclassified 4167
210 Ga0496123_0004612 3300048926 Bacteria 14337
211 Ga0496124_0001970 3300048927 Bacteria 28017
212 Ga0496125_0015593 3300048928 Bacteria 7335
213 Ga0501032_0011520 3300049569 Bacteria 6353
214 Ga0501033_0000856 3300049570 Bacteria 27837
215 Ga0501033_0178703 3300049570 Bacteria 1522
216 Ga0501033_0241097 3300049570 Bacteria 1283
217 Ga0501034_0000356 3300049571 Bacteria 78262
218 Ga0501034_0003780 3300049571 Bacteria 17084
219 Ga0501034_0086764 3300049571 Bacteria 3130
220 Ga0501036_0015742 3300049572 Bacteria 6317
221 Ga0501036_0100769 3300049572 Bacteria 2443
222 Ga0501037_0385081 3300049573 Bacteria 963
223 Ga0501038_0001203 3300049574 Bacteria 23486
224 Ga0501038_0060926 3300049574 Bacteria 3228
225 Ga0501039_0141071 3300049575 Bacteria 1893
226 Ga0501039_0347978 3300049575 Bacteria 1165
227 Ga0501040_0064593 3300049576 Bacteria 2520
228 Ga0501041_0331744 3300049577 Bacteria 960
229 Ga0501042_0167692 3300049578 Bacteria 1584
230 Ga0501043_0000894 3300049579 Bacteria 26429
231 Ga0501043_0155674 3300049579 Bacteria 1787
232 Ga0501046_0000001 3300049580 Bacteria 609806
233 Ga0501047_0017727 3300049581 Bacteria 6821
234 Ga0501048_0001153 3300049582 Bacteria 19869
235 Ga0501048_0114070 3300049582 Bacteria 1909
236 Ga0501067_0127644 3300049583 Bacteria 1415
237 Ga0501070_0195874 3300049586 Bacteria 1660
238 Ga0501070_0225213 3300049586 Bacteria 1537
239 Ga0501071_0018541 3300049587 Bacteria 4820
240 Ga0501075_0022573 3300049591 Bacteria 4598
241 Ga0501076_0126576 3300049592 Bacteria 2070
242 Ga0501077_0058230 3300049593 Bacteria 2453
243 Ga0501077_0158285 3300049593 Bacteria 1438
244 Ga0501079_0082705 3300049741 Bacteria 2483
245 Ga0501079_0374158 3300049741 Bacteria 1117
246 Ga0501081_0115922 3300049743 Bacteria 1904
247 Ga0501083_0000001 3300049744 Bacteria 555041
248 Ga0501083_0536112 3300049744 Bacteria 762
249 Ga0501035_0063774 3300049822 Bacteria 3276
250 Ga0501035_0065886 3300049822 Bacteria 3215
251 Ga0501044_0006270 3300049823 Bacteria 13144
252 Ga0501044_0043816 3300049823 Bacteria 4647
253 Ga0501044_0070357 3300049823 Bacteria 3559
254 Ga0501044_0798777 3300049823 Bacteria 823
255 Ga0501045_0072211 3300049824 Bacteria 2541
256 nmdc:mga05p37_234844_c1 3300050507 Bacteria 2208
257 nmdc:mga05p37_2524_c1 3300050507 Bacteria 21272
258 nmdc:mga06r32_74399_c1 3300050510 Bacteria 3294
259 nmdc:mga06r32_9950_c1 3300050510 Bacteria 8583
260 nmdc:mga08y16_229740_c1 3300050511 Bacteria 1919
261 nmdc:mga08y16_8245_c1 3300050511 Bacteria 10899
262 nmdc:mga0n895_254546_c1 3300050512 Bacteria 1782
263 Ga0500610_0134369 3300053079 Bacteria 1255
264 Ga0495655_0002400 3300053083 Bacteria 2974
265 Ga0495619_0107738 3300053085 Bacteria 1901
266 Ga0495619_0136404 3300053085 Bacteria 1688
267 Ga0500578_0053914 3300053086 Bacteria 2574
268 Ga0500583_0155193 3300053092 Bacteria 1140
269 Ga0500566_0048921 3300053094 Bacteria 2423
270 Ga0500654_040906 3300053099 Bacteria 2635
271 Ga0500654_060570 3300053099 Bacteria 1942
272 Ga0500660_104573 3300053100 Bacteria 1225
273 Ga0500553_020415 3300053101 Bacteria 3360
274 Ga0500569_009199 3300053109 Bacteria 2287
275 Ga0500628_002522 3300053129 Bacteria 3020
276 Ga0500652_003457 3300053131 Bacteria 4791
277 Ga0500658_0007122 3300053134 Bacteria 4134
278 Ga0500561_0005036 3300053137 Bacteria 2426
279 Ga0500573_0020110 3300053140 Bacteria 3823
280 Ga0500573_0058763 3300053140 Bacteria 2204
281 Ga0500630_073724 3300053159 Bacteria 1610
282 Ga0500634_0006702 3300053161 Bacteria 5597
283 Ga0500656_000205 3300053732 Bacteria 3893
284 Ga0500587_002857 3300053739 Bacteria 2442
285 Ga0501084_0064370 3300054114 Bacteria 3069
286 Ga0587079_028851 3300059647 Unclassified 1053
287 Ga0501082_0073630 3300060353 Bacteria 2942
288 Ga0501082_0287076 3300060353 Bacteria 1432
289 Ga0466962_0090126 3300061719 Bacteria 1469
290 Ga0530510_0048434 3300061734 Bacteria 3072
291 Ga0530510_0304280 3300061734 Bacteria 1193
292 Ga0530510_0594850 3300061734 Bacteria 841

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046474 Ga0495605_0066051 Ga0495605_0066051_11_610 192
2 3300046492 Ga0495585_0113420 Ga0495585_0113420_829_1428 192
3 3300046506 Ga0495583_0149313 Ga0495583_0149313_14_613 192
4 3300046694 Ga0495649_0400038 Ga0495649_0400038_44_643 192
5 3300031731 Ga0307405_10150192 Ga0307405_101501922 205
6 3300015688 Ga0183367_1003 Ga0183367_1003723 207
7 3300047318 Ga0495636_0003957 Ga0495636_0003957_2199_2852 210
8 3300047323 Ga0495683_0172990 Ga0495683_0172990_117_770 210
9 3300047443 Ga0495687_001046 Ga0495687_001046_5668_6321 210
10 3300026142 Ga0207698_10655329 Ga0207698_106553292 211
11 3300048910 Ga0496107_0261787 Ga0496107_0261787_11_673 215
12 3300049586 Ga0501070_0225213 Ga0501070_0225213_671_1339 215
13 iso_pu_bacteria 2862281513 2862282314 215
14 3300033541 Ga0316596_1077291 Ga0316596_10772911 216
15 iso_pu_bacteria 2917736166 2917742110 216
16 3300006048 Ga0075363_100008938 Ga0075363_1000089386 217
17 3300046491 Ga0495584_0184292 Ga0495584_0184292_61_792 217
18 3300046518 Ga0495631_0039462 Ga0495631_0039462_438_1169 217
19 3300049569 Ga0501032_0011520 Ga0501032_0011520_4314_5045 217
20 3300049571 Ga0501034_0086764 Ga0501034_0086764_2262_2993 217
21 3300049572 Ga0501036_0015742 Ga0501036_0015742_2960_3691 217
22 3300049574 Ga0501038_0060926 Ga0501038_0060926_1388_2119 217
23 3300049575 Ga0501039_0347978 Ga0501039_0347978_263_994 217
24 3300049579 Ga0501043_0155674 Ga0501043_0155674_802_1533 217
25 3300049581 Ga0501047_0017727 Ga0501047_0017727_5304_6035 217
26 iso_pu_bacteria 2616644941 2616901382 217
27 iso_pu_bacteria 2643221548 2643762170 217
28 iso_pu_bacteria 2643221678 2644436190 217
29 iso_pu_bacteria 2643221682 2644459052 217
30 iso_pu_bacteria 2855670206 2855671039 217
31 iso_pu_bacteria 2857288857 2857290029 217
32 iso_pu_bacteria 2858848962 2858853012 217
33 iso_pu_bacteria 2858882152 2858884104 217
34 iso_pu_bacteria 2869061728 2869062093 217
35 iso_pu_bacteria 2869068681 2869073579 217
36 iso_pu_bacteria 2880489317 2880493025 217
37 iso_pu_bacteria 2929226422 2929227879 217
38 iso_pu_bacteria 8054704163 8054707561 217
39 iso_pu_bacteria 8054727385 8054731927 217
40 iso_pu_bacteria 8054734606 8054739464 217
41 3300005468 Ga0070707_100097688 Ga0070707_1000976884 218
42 3300005471 Ga0070698_100020082 Ga0070698_1000200828 218
43 3300005471 Ga0070698_100129237 Ga0070698_1001292373 218
44 3300005546 Ga0070696_100051172 Ga0070696_1000511721 218
45 3300025910 Ga0207684_10514460 Ga0207684_105144601 218
46 3300027717 Ga0209998_10000659 Ga0209998_100006592 218
47 3300039093 Ga0400489_80565 Ga0400489_80565_1064_1750 218
48 3300042147 Ga0450910_012440 Ga0450910_012440_287_970 218
49 3300042531 Ga0450918_033456 Ga0450918_033456_149_832 218
50 3300049744 Ga0501083_0536112 Ga0501083_0536112_49_723 218
51 iso_pu_bacteria 2808606359 2808841028 218
52 iso_pu_bacteria 2865002811 2865005312 218
53 iso_pu_bacteria 2880495981 2880499279 218
54 iso_pu_bacteria 2946064051 2946068548 218
55 3300005295 Ga0065707_10093592 Ga0065707_100935924 219
56 3300031616 Ga0307508_10133646 Ga0307508_101336463 219
57 3300032002 Ga0307416_100078126 Ga0307416_1000781262 219
58 3300045051 Ga0451576_0459802 Ga0451576_0459802_104_790 219
59 3300049570 Ga0501033_0241097 Ga0501033_0241097_38_715 219
60 3300049573 Ga0501037_0385081 Ga0501037_0385081_184_861 219
61 3300049575 Ga0501039_0141071 Ga0501039_0141071_1089_1766 219
62 3300049576 Ga0501040_0064593 Ga0501040_0064593_588_1265 219
63 3300049577 Ga0501041_0331744 Ga0501041_0331744_136_813 219
64 3300049578 Ga0501042_0167692 Ga0501042_0167692_797_1474 219
65 3300049582 Ga0501048_0114070 Ga0501048_0114070_136_813 219
66 3300049583 Ga0501067_0127644 Ga0501067_0127644_347_1033 219
67 3300049586 Ga0501070_0195874 Ga0501070_0195874_190_867 219
68 3300049587 Ga0501071_0018541 Ga0501071_0018541_284_961 219
69 3300049591 Ga0501075_0022573 Ga0501075_0022573_1165_1842 219
70 3300049592 Ga0501076_0126576 Ga0501076_0126576_996_1673 219
71 3300049593 Ga0501077_0058230 Ga0501077_0058230_339_1025 219
72 3300049593 Ga0501077_0158285 Ga0501077_0158285_729_1406 219
73 3300049741 Ga0501079_0082705 Ga0501079_0082705_745_1422 219
74 3300049743 Ga0501081_0115922 Ga0501081_0115922_986_1663 219
75 3300049824 Ga0501045_0072211 Ga0501045_0072211_1204_1881 219
76 3300050512 nmdc:mga0n895_254546_c1 nmdc:mga0n895_254546_c1_110_787 219
77 3300054114 Ga0501084_0064370 Ga0501084_0064370_1585_2262 219
78 3300060353 Ga0501082_0073630 Ga0501082_0073630_141_827 219
79 3300060353 Ga0501082_0287076 Ga0501082_0287076_42_719 219
80 3300061734 Ga0530510_0048434 Ga0530510_0048434_803_1489 219
81 3300061734 Ga0530510_0304280 Ga0530510_0304280_200_877 219
82 3300061734 Ga0530510_0594850 Ga0530510_0594850_12_698 219
83 iso_pu_bacteria 2751185782 2753262747 219
84 iso_pu_bacteria 2772190715 2772642662 219
85 iso_pu_bacteria 2818991463 2819695820 219
86 3300005341 Ga0070691_10195819 Ga0070691_101958191 220
87 3300005445 Ga0070708_100115998 Ga0070708_1001159982 220
88 3300005842 Ga0068858_100758046 Ga0068858_1007580461 220
89 3300006844 Ga0075428_100023224 Ga0075428_1000232245 220
90 3300006844 Ga0075428_100744188 Ga0075428_1007441882 220
91 3300006846 Ga0075430_100002438 Ga0075430_10000243813 220
92 3300006847 Ga0075431_100052255 Ga0075431_1000522552 220
93 3300006880 Ga0075429_100001082 Ga0075429_1000010828 220
94 3300009094 Ga0111539_10267865 Ga0111539_102678652 220
95 3300009147 Ga0114129_10005530 Ga0114129_100055306 220
96 3300009545 Ga0105237_10305568 Ga0105237_103055682 220
97 3300025907 Ga0207645_10204052 Ga0207645_102040521 220
98 3300028573 Ga0265334_10033241 Ga0265334_100332413 220
99 3300028794 Ga0307515_10000476 Ga0307515_1000047612 220
100 3300031665 Ga0316575_10007397 Ga0316575_100073972 220
101 3300031711 Ga0265314_10002590 Ga0265314_100025905 220
102 3300031728 Ga0316578_10155561 Ga0316578_101555612 220
103 3300031730 Ga0307516_10041601 Ga0307516_100416013 220
104 3300032133 Ga0316583_10053222 Ga0316583_100532221 220
105 3300035117 Ga0373953_0175932 Ga0373953_0175932_104_811 220
106 3300035398 Ga0316574_0002967 Ga0316574_0002967_5599_6315 220
107 3300036401 Ga0373937_0058826 Ga0373937_0058826_407_1114 220
108 3300036647 Ga0316582_0008832 Ga0316582_0008832_4439_5137 220
109 3300036647 Ga0316582_0046049 Ga0316582_0046049_1373_2089 220
110 3300036647 Ga0316582_0080214 Ga0316582_0080214_913_1620 220
111 3300037418 Ga0395900_0795276 Ga0395900_0795276_15_704 220
112 3300046452 Ga0495617_019168 Ga0495617_019168_1163_1852 220
113 3300046455 Ga0495603_0026834 Ga0495603_0026834_358_1047 220
114 3300046459 Ga0495629_0024596 Ga0495629_0024596_2601_3290 220
115 3300046473 Ga0495582_0192782 Ga0495582_0192782_155_844 220
116 3300046499 Ga0495594_0052126 Ga0495594_0052126_738_1427 220
117 3300046500 Ga0495596_0065086 Ga0495596_0065086_466_1155 220
118 3300046501 Ga0495607_0047609 Ga0495607_0047609_1284_1973 220
119 3300046513 Ga0495616_0016940 Ga0495616_0016940_915_1604 220
120 3300046515 Ga0495620_0004771 Ga0495620_0004771_6672_7361 220
121 3300046515 Ga0495620_0022766 Ga0495620_0022766_945_1634 220
122 3300046518 Ga0495631_0009429 Ga0495631_0009429_1143_1832 220
123 3300046522 Ga0495643_0000900 Ga0495643_0000900_11548_12237 220
124 3300046524 Ga0495648_0059098 Ga0495648_0059098_1007_1696 220
125 3300046526 Ga0495666_0014923 Ga0495666_0014923_1011_1700 220
126 3300046542 Ga0495597_0043686 Ga0495597_0043686_405_1094 220
127 3300046557 Ga0495622_0127198 Ga0495622_0127198_245_934 220
128 3300046558 Ga0495633_0022426 Ga0495633_0022426_2429_3118 220
129 3300046559 Ga0495667_0277269 Ga0495667_0277269_227_934 220
130 3300046642 Ga0495634_0191158 Ga0495634_0191158_37_726 220
131 3300046648 Ga0495611_0005846 Ga0495611_0005846_3299_3988 220
132 3300046660 Ga0495625_0066370 Ga0495625_0066370_1243_1932 220
133 3300046665 Ga0495661_0112163 Ga0495661_0112163_313_1002 220
134 3300046689 Ga0495613_0003357 Ga0495613_0003357_10491_11198 220
135 3300046689 Ga0495613_0095434 Ga0495613_0095434_1359_2048 220
136 3300046694 Ga0495649_0021908 Ga0495649_0021908_1702_2391 220
137 3300046794 Ga0495589_0008699 Ga0495589_0008699_1416_2105 220
138 3300047321 Ga0495676_0009072 Ga0495676_0009072_3330_4019 220
139 3300047323 Ga0495683_0180785 Ga0495683_0180785_103_792 220
140 3300047443 Ga0495687_049336 Ga0495687_049336_966_1655 220
141 3300047443 Ga0495687_099604 Ga0495687_099604_276_965 220
142 3300047447 Ga0495685_002848 Ga0495685_002848_3096_3785 220
143 3300047471 Ga0495684_0003697 Ga0495684_0003697_1517_2224 220
144 3300047472 Ga0495686_0205884 Ga0495686_0205884_277_966 220
145 3300048089 Ga0495614_0021039 Ga0495614_0021039_737_1426 220
146 3300048091 Ga0495626_0008954 Ga0495626_0008954_2705_3394 220
147 3300048912 Ga0496109_0228416 Ga0496109_0228416_51_734 220
148 3300048913 Ga0496110_0525104 Ga0496110_0525104_72_755 220
149 3300049570 Ga0501033_0178703 Ga0501033_0178703_50_760 220
150 3300049571 Ga0501034_0000356 Ga0501034_0000356_37862_38572 220
151 3300049571 Ga0501034_0003780 Ga0501034_0003780_266_979 220
152 3300049572 Ga0501036_0100769 Ga0501036_0100769_1683_2396 220
153 3300049574 Ga0501038_0001203 Ga0501038_0001203_22629_23342 220
154 3300049579 Ga0501043_0000894 Ga0501043_0000894_4679_5437 220
155 3300049580 Ga0501046_0000001 Ga0501046_0000001_358419_359177 220
156 3300049582 Ga0501048_0001153 Ga0501048_0001153_1244_2002 220
157 3300049744 Ga0501083_0000001 Ga0501083_0000001_302056_302814 220
158 3300049822 Ga0501035_0065886 Ga0501035_0065886_1861_2619 220
159 3300049823 Ga0501044_0006270 Ga0501044_0006270_8930_9646 220
160 3300049823 Ga0501044_0043816 Ga0501044_0043816_2180_2890 220
161 3300049823 Ga0501044_0070357 Ga0501044_0070357_1055_1813 220
162 3300049823 Ga0501044_0798777 Ga0501044_0798777_84_797 220
163 3300050507 nmdc:mga05p37_2524_c1 nmdc:mga05p37_2524_c1_4738_5448 220
164 3300050510 nmdc:mga06r32_9950_c1 nmdc:mga06r32_9950_c1_4083_4793 220
165 3300050511 nmdc:mga08y16_229740_c1 nmdc:mga08y16_229740_c1_594_1274 220
166 iso_pu_bacteria 2857453340 2857457999 220
167 iso_pu_bacteria 2873151551 2873154990 220
168 iso_pu_bacteria 2966598605 2966599100 220
169 iso_pu_bacteria 2971410472 2971413501 220
170 iso_pu_bacteria 8056533031 8056535751 220
171 3300003316 rootH1_10039915 rootH1_100399154 221
172 3300005347 Ga0070668_100000526 Ga0070668_10000052616 221
173 3300005347 Ga0070668_100029648 Ga0070668_1000296482 221
174 3300005353 Ga0070669_100116928 Ga0070669_1001169283 221
175 3300005355 Ga0070671_100325879 Ga0070671_1003258792 221
176 3300005617 Ga0068859_100463621 Ga0068859_1004636212 221
177 3300005719 Ga0068861_100114098 Ga0068861_1001140981 221
178 3300005842 Ga0068858_100016731 Ga0068858_1000167312 221
179 3300005843 Ga0068860_100049505 Ga0068860_1000495053 221
180 3300005844 Ga0068862_100041335 Ga0068862_1000413352 221
181 3300005844 Ga0068862_100248925 Ga0068862_1002489253 221
182 3300006931 Ga0097620_100463605 Ga0097620_1004636052 221
183 3300009094 Ga0111539_10018510 Ga0111539_100185105 221
184 3300009147 Ga0114129_10727466 Ga0114129_107274662 221
185 3300014325 Ga0163163_10056640 Ga0163163_100566405 221
186 3300014968 Ga0157379_10058245 Ga0157379_100582453 221
187 3300025972 Ga0207668_10000229 Ga0207668_1000022921 221
188 3300026035 Ga0207703_10022751 Ga0207703_100227513 221
189 3300026118 Ga0207675_100147215 Ga0207675_1001472153 221
190 3300028380 Ga0268265_10048689 Ga0268265_100486894 221
191 3300028380 Ga0268265_10236079 Ga0268265_102360793 221
192 3300028381 Ga0268264_10122626 Ga0268264_101226262 221
193 3300031242 Ga0265329_10089619 Ga0265329_100896192 221
194 3300031344 Ga0265316_10150751 Ga0265316_101507511 221
195 3300031344 Ga0265316_10271102 Ga0265316_102711022 221
196 3300031616 Ga0307508_10031150 Ga0307508_100311505 221
197 3300031730 Ga0307516_10035044 Ga0307516_100350444 221
198 3300031730 Ga0307516_10070328 Ga0307516_100703282 221
199 3300031730 Ga0307516_10183138 Ga0307516_101831382 221
200 3300031901 Ga0307406_10762294 Ga0307406_107622941 221
201 3300031911 Ga0307412_10535499 Ga0307412_105354992 221
202 3300032002 Ga0307416_100988414 Ga0307416_1009884141 221
203 3300039438 Ga0436360_1026785 Ga0436360_1026785_800_1507 221
204 3300039453 Ga0436362_1149967 Ga0436362_1149967_1996_2703 221
205 3300046462 Ga0495651_0165346 Ga0495651_0165346_778_1494 221
206 3300046522 Ga0495643_0010878 Ga0495643_0010878_2459_3181 221
207 3300046558 Ga0495633_0072096 Ga0495633_0072096_48_770 221
208 3300046660 Ga0495625_0018015 Ga0495625_0018015_2516_3283 221
209 3300046679 Ga0495623_0215336 Ga0495623_0215336_331_1047 221
210 3300046689 Ga0495613_0037290 Ga0495613_0037290_2539_3255 221
211 3300046691 Ga0495670_0001737 Ga0495670_0001737_4444_5166 221
212 3300047323 Ga0495683_0036684 Ga0495683_0036684_1450_2166 221
213 3300047443 Ga0495687_009158 Ga0495687_009158_3822_4544 221
214 3300047447 Ga0495685_001564 Ga0495685_001564_2128_2850 221
215 3300047470 Ga0495681_0006933 Ga0495681_0006933_5828_6550 221
216 3300047472 Ga0495686_0031869 Ga0495686_0031869_2505_3227 221
217 3300050507 nmdc:mga05p37_234844_c1 nmdc:mga05p37_234844_c1_1461_2177 221
218 3300050510 nmdc:mga06r32_74399_c1 nmdc:mga06r32_74399_c1_310_1026 221
219 3300050511 nmdc:mga08y16_8245_c1 nmdc:mga08y16_8245_c1_9427_10143 221
220 3300053079 Ga0500610_0134369 Ga0500610_0134369_179_901 221
221 3300053083 Ga0495655_0002400 Ga0495655_0002400_1301_2023 221
222 3300053085 Ga0495619_0107738 Ga0495619_0107738_885_1601 221
223 3300053086 Ga0500578_0053914 Ga0500578_0053914_1167_1889 221
224 3300053092 Ga0500583_0155193 Ga0500583_0155193_154_876 221
225 3300053099 Ga0500654_040906 Ga0500654_040906_1201_1923 221
226 3300053099 Ga0500654_060570 Ga0500654_060570_1154_1840 221
227 3300053100 Ga0500660_104573 Ga0500660_104573_38_754 221
228 3300053101 Ga0500553_020415 Ga0500553_020415_2581_3297 221
229 3300053109 Ga0500569_009199 Ga0500569_009199_162_884 221
230 3300053129 Ga0500628_002522 Ga0500628_002522_2137_2859 221
231 3300053131 Ga0500652_003457 Ga0500652_003457_1571_2293 221
232 3300053134 Ga0500658_0007122 Ga0500658_0007122_2501_3223 221
233 3300053137 Ga0500561_0005036 Ga0500561_0005036_1363_2085 221
234 3300053140 Ga0500573_0020110 Ga0500573_0020110_566_1348 221
235 3300053159 Ga0500630_073724 Ga0500630_073724_208_894 221
236 3300053161 Ga0500634_0006702 Ga0500634_0006702_4452_5174 221
237 3300053732 Ga0500656_000205 Ga0500656_000205_685_1407 221
238 3300053739 Ga0500587_002857 Ga0500587_002857_1107_1829 221
239 iso_pu_bacteria 2980182181 2980184141 221
240 3300001991 JGI24743J22301_10035810 JGI24743J22301_100358102 222
241 3300005290 Ga0065712_10182221 Ga0065712_101822211 222
242 3300005293 Ga0065715_10220248 Ga0065715_102202481 222
243 3300005329 Ga0070683_100302809 Ga0070683_1003028092 222
244 3300005331 Ga0070670_100025434 Ga0070670_1000254343 222
245 3300005364 Ga0070673_100359453 Ga0070673_1003594531 222
246 3300005364 Ga0070673_100486282 Ga0070673_1004862821 222
247 3300005365 Ga0070688_100575218 Ga0070688_1005752181 222
248 3300005445 Ga0070708_100019555 Ga0070708_1000195552 222
249 3300005456 Ga0070678_100423215 Ga0070678_1004232152 222
250 3300005468 Ga0070707_100006105 Ga0070707_1000061056 222
251 3300005471 Ga0070698_100136661 Ga0070698_1001366612 222
252 3300005471 Ga0070698_100194968 Ga0070698_1001949682 222
253 3300005518 Ga0070699_100008837 Ga0070699_1000088376 222
254 3300009098 Ga0105245_10281886 Ga0105245_102818863 222
255 3300009176 Ga0105242_10430611 Ga0105242_104306111 222
256 3300013297 Ga0157378_10236009 Ga0157378_102360093 222
257 3300014325 Ga0163163_10142249 Ga0163163_101422492 222
258 3300014325 Ga0163163_10343611 Ga0163163_103436111 222
259 3300014968 Ga0157379_10010951 Ga0157379_100109514 222
260 3300025315 Ga0207697_10016905 Ga0207697_100169054 222
261 3300025901 Ga0207688_10005584 Ga0207688_100055842 222
262 3300025922 Ga0207646_10018299 Ga0207646_100182992 222
263 3300025922 Ga0207646_10139924 Ga0207646_101399242 222
264 3300025925 Ga0207650_10090292 Ga0207650_100902922 222
265 3300025934 Ga0207686_10191970 Ga0207686_101919702 222
266 3300025944 Ga0207661_10166550 Ga0207661_101665502 222
267 3300026121 Ga0207683_10203662 Ga0207683_102036622 222
268 3300026142 Ga0207698_10220407 Ga0207698_102204072 222
269 3300028794 Ga0307515_10029271 Ga0307515_100292714 222
270 3300037466 Ga0395898_0001337 Ga0395898_0001337_5056_5748 222
271 3300039437 Ga0436365_1621840 Ga0436365_1621840_83_775 222
272 3300044719 Ga0466971_0021365 Ga0466971_0021365_2070_2762 222
273 3300045051 Ga0451576_1077506 Ga0451576_1077506_42_740 222
274 3300045836 Ga0466958_0108738 Ga0466958_0108738_887_1579 222
275 3300046648 Ga0495611_0023643 Ga0495611_0023643_268_999 222
276 3300046665 Ga0495661_0233639 Ga0495661_0233639_50_781 222
277 3300046683 Ga0495658_0083807 Ga0495658_0083807_621_1313 222
278 3300048904 Ga0496101_0354733 Ga0496101_0354733_198_890 222
279 3300048911 Ga0496108_0182217 Ga0496108_0182217_502_1194 222
280 3300048913 Ga0496110_0275140 Ga0496110_0275140_210_902 222
281 3300048915 Ga0496112_0643657 Ga0496112_0643657_171_926 222
282 3300048916 Ga0496113_0020563 Ga0496113_0020563_3786_4478 222
283 3300048917 Ga0496114_0090310 Ga0496114_0090310_583_1275 222
284 3300049570 Ga0501033_0000856 Ga0501033_0000856_4578_5270 222
285 3300049741 Ga0501079_0374158 Ga0501079_0374158_129_857 222
286 3300049822 Ga0501035_0063774 Ga0501035_0063774_2512_3204 222
287 3300053085 Ga0495619_0136404 Ga0495619_0136404_784_1476 222
288 3300053140 Ga0500573_0058763 Ga0500573_0058763_1095_1862 222
289 3300061719 Ga0466962_0090126 Ga0466962_0090126_534_1226 222
290 iso_pu_bacteria 2524023129 2524189959 222
291 iso_pu_bacteria 2585428059 2587744124 222
292 iso_pu_bacteria 2643221578 2643901840 222
293 iso_pu_bacteria 2643221673 2644407986 222
294 iso_pu_bacteria 2643221676 2644424159 222
295 iso_pu_bacteria 2643221714 2644630840 222
296 iso_pu_bacteria 2791355222 2793186634 222
297 iso_pu_bacteria 2875391855 2875397783 222
298 iso_pu_bacteria 2888578766 2888579569 222
299 iso_pu_bacteria 2889049205 2889051804 222
300 iso_pu_bacteria 2891554331 2891559944 222
301 iso_pu_bacteria 2919425241 2919428583 222
302 iso_pu_bacteria 2946045630 2946046725 222
303 iso_pu_bacteria 2946072368 2946072977 222
304 iso_pu_bacteria 2954711539 2954719196 222
305 iso_pu_bacteria 2954721474 2954729167 222
306 iso_pu_bacteria 2954731030 2954732643 222
307 iso_pu_bacteria 2954740390 2954748067 222
308 iso_pu_bacteria 2954749733 2954751522 222
309 iso_pu_bacteria 2954759201 2954767192 222
310 iso_pu_bacteria 8025530807 8025537197 222
311 iso_pu_bacteria 8056829672 8056835009 222
312 3300044684 Ga0466966_0105096 Ga0466966_0105096_829_1536 223
313 3300044693 Ga0466961_0113071 Ga0466961_0113071_207_914 223
314 3300003316 rootH1_10021024 rootH1_100210243 224
315 3300021361 Ga0213872_10032633 Ga0213872_100326332 224
316 3300025906 Ga0207699_10323191 Ga0207699_103231912 224
317 3300028786 Ga0307517_10027850 Ga0307517_100278502 224
318 3300031616 Ga0307508_10071877 Ga0307508_100718773 224
319 3300031730 Ga0307516_10120016 Ga0307516_101200162 224
320 3300037471 Ga0395905_0719138 Ga0395905_0719138_11_715 224
321 3300039447 Ga0436361_0622658 Ga0436361_0622658_1866_2633 224
322 3300039453 Ga0436362_0445418 Ga0436362_0445418_202_969 224
323 3300041512 Ga0451853_2164245 Ga0451853_2164245_1555_2295 224
324 3300046455 Ga0495603_0018419 Ga0495603_0018419_2396_3133 224
325 3300046459 Ga0495629_0018029 Ga0495629_0018029_2940_3677 224
326 3300046499 Ga0495594_0011360 Ga0495594_0011360_1372_2109 224
327 3300046557 Ga0495622_0111967 Ga0495622_0111967_183_920 224
328 3300046674 Ga0495588_0030251 Ga0495588_0030251_1029_1766 224
329 3300047321 Ga0495676_0185754 Ga0495676_0185754_79_816 224
330 3300048089 Ga0495614_0091327 Ga0495614_0091327_316_1053 224
331 3300048909 Ga0496106_0032677 Ga0496106_0032677_2764_3540 224
332 3300048919 Ga0496116_0208820 Ga0496116_0208820_19_732 224
333 3300053094 Ga0500566_0048921 Ga0500566_0048921_449_1180 224
334 3300013308 Ga0157375_10506069 Ga0157375_105060691 225
335 3300048919 Ga0496116_0058853 Ga0496116_0058853_631_1350 225
336 3300048922 Ga0496119_0059575 Ga0496119_0059575_1289_2008 225
337 3300048923 Ga0496120_0039003 Ga0496120_0039003_338_1057 225
338 3300048925 Ga0496122_0034159 Ga0496122_0034159_754_1473 225
339 3300048926 Ga0496123_0004612 Ga0496123_0004612_1163_1882 225
340 3300048927 Ga0496124_0001970 Ga0496124_0001970_18644_19363 225
341 3300048928 Ga0496125_0015593 Ga0496125_0015593_5833_6552 225
342 3300059647 Ga0587079_028851 Ga0587079_028851_318_1037 225
343 3300000545 CNXas_1000083 CNXas_100008313 226
344 3300031456 Ga0307513_10010334 Ga0307513_100103342 226

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

27

137

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

179

255

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9808 1 117
7m0s-assembly1.cif.gz_B n-terminal domain of pmra from acinetobacter baumannii 0.9783 1 118
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9778 1 117
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9776 1 117
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9773 1 117
ID Description Score Start End Superfamily
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9906 1 78 3.40.50.2300
af_P9WGN1_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9878 1 76 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9872 1 78 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.985 2 76 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.982 1 78 3.40.50.2300
ID Description Score Start End GO Terms
AF-W7B464-F1-model_v4 DNA-binding response regulator 0.9893 2 115 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A0P9H4P7-F1-model_v4 Fis family transcriptional regulator 0.9845 2 118 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A349M0D6-F1-model_v4 DNA-binding response regulator 0.9838 1 117 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2X3LBK5-F1-model_v4 deleted 0.9829 2 118
AF-A0A5R2MYZ3-F1-model_v4 Response regulator 0.9827 2 117 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
87.9 0.55 Medium
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Predicted Structure (AlphaFold2)

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