F416065

General Info

Members Datasets Scaffolds Average Seq Length
344 196 683 263

Family's Representative Sequence

Representative Sequence 3300042005|Ga0439448_0004476|Ga0439448_0004476_2449_3273
Length 274
Sequence LIELEPKYVEPQPKPICALVVDDEAPARRRLVELLTKERDIGRILQAENGVAAVALIQEQKPDIVFLDVQMPGIDGFGVINAIGADNMPLTVFVTAYDRFALQAFEADAIDYLLKPFGDRRYERTLARVRERLHVLRSRESENAGSFGPELLKLLEKRSKPGEIWDWIVVKSRDATRLIMTEDIDWIEAAGVYVTVHAGGEEFLYRAGLATVASRLDPFRFVRIHRSSIVNLKSVAFLERRSHGEFDVVLKSGAQLMMSRSYRAEVEAMLGQSL

Samples

Sample ID Description Type Environment
1 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
2 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
3 3300000652 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Col-0 young rhizosphere DNA Metagenome Rhizosphere
4 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
5 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
6 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
7 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
8 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
9 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
10 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
11 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
31 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
82 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
89 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
131 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
132 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
133 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
134 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
141 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
142 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
143 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
144 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
145 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
146 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
147 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
148 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
149 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
150 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
151 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
152 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
153 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
154 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
155 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
156 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
159 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
160 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
161 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
162 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
163 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
164 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
165 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
166 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
167 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
168 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
169 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
170 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
171 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
172 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
173 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
174 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
175 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
176 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
177 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
178 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
179 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
180 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
181 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
182 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
183 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
184 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
185 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
186 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
187 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
188 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
189 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
190 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
191 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
192 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
193 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
194 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
195 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
196 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.26
Metatranscriptomes 0
Isolates 1.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.59
Nodule 0
Rhizoplane 0
Rhizosphere 87.21
Stem 0
Stem Tuber 0
Unclassified 6.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439448_0004476 3300042005 Bacteria 3944
2 ARcpr5oldR_c004587 3300000041 Bacteria 1198
3 ARCol0yngRDRAFT_1003240 3300000652 Bacteria 1197
4 JGI24736J21556_1002289 3300001904 Bacteria 3384
5 JGI24736J21556_1008916 3300001904 Bacteria 1661
6 JGI24736J21556_1023848 3300001904 Unclassified 955
7 JGI24741J21665_1000706 3300001915 Bacteria 10084
8 JGI24740J21852_10002218 3300001979 Bacteria 8877
9 JGI24740J21852_10013056 3300001979 Bacteria 3114
10 JGI24739J22299_10000031 3300001989 Bacteria 38713
11 JGI24739J22299_10000746 3300001989 Bacteria 11827
12 JGI24739J22299_10000764 3300001989 Bacteria 11711
13 JGI24739J22299_10008725 3300001989 Bacteria 3780
14 JGI24739J22299_10020574 3300001989 Bacteria 2357
15 JGI24737J22298_10000100 3300001990 Bacteria 25597
16 JGI24737J22298_10000146 3300001990 Bacteria 21962
17 JGI24737J22298_10001570 3300001990 Bacteria 8131
18 JGI24743J22301_10026854 3300001991 Bacteria 1122
19 JGI24735J21928_10000792 3300002067 Bacteria 11259
20 JGI24735J21928_10001534 3300002067 Bacteria 8186
21 JGI24735J21928_10003739 3300002067 Bacteria 5161
22 JGI24735J21928_10006701 3300002067 Bacteria 3781
23 JGI24735J21928_10008402 3300002067 Bacteria 3338
24 JGI24738J21930_10000047 3300002075 Bacteria 24272
25 JGI24738J21930_10000266 3300002075 Bacteria 14231
26 JGI25153J46596_10021206 3300003215 Bacteria 2428
27 rootH1_10044016 3300003316 Bacteria 7057
28 rootH1_10053464 3300003316 Unclassified 2474
29 rootH1_10053464 3300003323 Bacteria 2011
30 rootH1_10087000 3300003316 Bacteria 3163
31 rootH2_10023938 3300003320 Bacteria 10918
32 rootH2_10097667 3300003320 Bacteria 1753
33 rootL2_10156011 3300003322 Unclassified 3287
34 rootL2_10250178 3300003322 Bacteria 1661
35 Ga0055529_1004838 3300003763 Bacteria 2013
36 Ga0055537_1000628 3300003773 Bacteria 19095
37 Ga0055524_1000226 3300003775 Bacteria 59950
38 Ga0055530_10000106 3300003791 Bacteria 71921
39 Ga0055530_10029776 3300003791 Bacteria 1455
40 Ga0055531_10000012 3300003794 Bacteria 191187
41 Ga0055531_10002131 3300003794 Bacteria 13562
42 Ga0065165_1000705 3300005262 Bacteria 47513
43 Ga0065165_1007060 3300005262 Bacteria 5650
44 Ga0065165_1009470 3300005262 Bacteria 4363
45 Ga0070658_10000742 3300005327 Bacteria 27967
46 Ga0070658_10002405 3300005327 Bacteria 15663
47 Ga0070658_10203311 3300005327 Unclassified 1672
48 Ga0070676_10001184 3300005328 Bacteria 13065
49 Ga0068869_100000850 3300005334 Bacteria 17511
50 Ga0070666_10008534 3300005335 Bacteria 6367
51 Ga0068868_100000298 3300005338 Bacteria 33358
52 Ga0070660_100000486 3300005339 Bacteria 26546
53 Ga0070660_100025736 3300005339 Bacteria 4376
54 Ga0070660_100065839 3300005339 Bacteria 2820
55 Ga0070661_100000776 3300005344 Bacteria 23062
56 Ga0070671_100019510 3300005355 Bacteria 5519
57 Ga0070671_100198992 3300005355 Bacteria 1699
58 Ga0070674_100001346 3300005356 Bacteria 12944
59 Ga0070674_100020172 3300005356 Bacteria 4252
60 Ga0070674_100033638 3300005356 Bacteria 3414
61 Ga0070674_100110343 3300005356 Unclassified 2019
62 Ga0070673_100000094 3300005364 Bacteria 39584
63 Ga0070673_100110080 3300005364 Unclassified 2283
64 Ga0070659_100084607 3300005366 Bacteria 2536
65 Ga0070659_100169663 3300005366 Bacteria 1787
66 Ga0070659_100177286 3300005366 Bacteria 1748
67 Ga0070659_100358085 3300005366 Bacteria 1225
68 Ga0070678_100000036 3300005456 Bacteria 44006
69 Ga0070662_100000479 3300005457 Bacteria 23707
70 Ga0070662_100003496 3300005457 Bacteria 9798
71 Ga0070662_100031380 3300005457 Unclassified 3728
72 Ga0070662_100067433 3300005457 Bacteria 2627
73 Ga0070662_100101215 3300005457 Bacteria 2181
74 Ga0070662_100166812 3300005457 Bacteria 1726
75 Ga0068867_100000202 3300005459 Bacteria 39594
76 Ga0070699_100238258 3300005518 Unclassified 1623
77 Ga0070679_100000236 3300005530 Bacteria 45805
78 Ga0070684_100096067 3300005535 Bacteria 2641
79 Ga0068853_100121672 3300005539 Bacteria 2329
80 Ga0068853_100744850 3300005539 Unclassified 936
81 Ga0070672_100018673 3300005543 Bacteria 5019
82 Ga0070672_100468842 3300005543 Bacteria 1086
83 Ga0068855_100049460 3300005563 Bacteria 4958
84 Ga0068855_100061877 3300005563 Bacteria 4372
85 Ga0070664_100001770 3300005564 Bacteria 17311
86 Ga0070664_100107504 3300005564 Bacteria 2432
87 Ga0068857_100007510 3300005577 Bacteria 9380
88 Ga0068857_100052357 3300005577 Bacteria 3622
89 Ga0068857_100403420 3300005577 Bacteria 1272
90 Ga0068856_100001964 3300005614 Bacteria 21423
91 Ga0068856_100016062 3300005614 Bacteria 7237
92 Ga0068856_100131836 3300005614 Bacteria 2504
93 Ga0068852_100000838 3300005616 Bacteria 20374
94 Ga0068852_100240690 3300005616 Bacteria 1729
95 Ga0068859_100003574 3300005617 Bacteria 15840
96 Ga0068859_100154228 3300005617 Bacteria 2373
97 Ga0068861_100000004 3300005719 Bacteria 105907
98 Ga0068851_10020581 3300005834 Bacteria 3195
99 Ga0068851_10241137 3300005834 Bacteria 1022
100 Ga0068858_100153489 3300005842 Bacteria 2166
101 Ga0075369_10043431 3300006186 Unclassified 1929
102 Ga0097621_100074538 3300006237 Unclassified 2811
103 Ga0075428_100698238 3300006844 Bacteria 1081
104 Ga0075429_100020960 3300006880 Bacteria 5670
105 Ga0068865_100000123 3300006881 Bacteria 39584
106 Ga0097620_100003574 3300006931 Bacteria 15840
107 Ga0097620_100154230 3300006931 Bacteria 2373
108 Ga0105240_10127506 3300009093 Bacteria 3056
109 Ga0105245_10000779 3300009098 Bacteria 28920
110 Ga0114129_10025220 3300009147 Bacteria 8424
111 Ga0105243_10000058 3300009148 Bacteria 131551
112 Ga0105243_10000794 3300009148 Bacteria 30172
113 Ga0105241_10004263 3300009174 Bacteria 10575
114 Ga0105242_10004107 3300009176 Bacteria 11325
115 Ga0105248_10001310 3300009177 Bacteria 27712
116 Ga0105248_10034468 3300009177 Bacteria 5660
117 Ga0105237_10032978 3300009545 Bacteria 5245
118 Ga0105237_10051292 3300009545 Bacteria 4144
119 Ga0105238_10048425 3300009551 Bacteria 4284
120 Ga0105238_10271452 3300009551 Bacteria 1676
121 Ga0105249_10004998 3300009553 Bacteria 11446
122 Ga0105249_10068163 3300009553 Bacteria 3280
123 Ga0105239_10064106 3300010375 Bacteria 4034
124 Ga0105239_10443827 3300010375 Bacteria 1471
125 Ga0105246_10001120 3300011119 Bacteria 15586
126 Ga0105246_10001816 3300011119 Bacteria 12791
127 Ga0105246_10145997 3300011119 Bacteria 1785
128 Ga0157326_1002300 3300012513 Unclassified 2056
129 Ga0157373_10005079 3300013100 Bacteria 9886
130 Ga0157373_10061829 3300013100 Bacteria 2652
131 Ga0157373_10114739 3300013100 Bacteria 1894
132 Ga0157373_10174102 3300013100 Bacteria 1514
133 Ga0157373_10259263 3300013100 Bacteria 1230
134 Ga0157373_10324342 3300013100 Bacteria 1096
135 Ga0157371_10000032 3300013102 Bacteria 230252
136 Ga0157371_10053365 3300013102 Unclassified 2870
137 Ga0157371_10259249 3300013102 Unclassified 1253
138 Ga0157371_10265920 3300013102 Unclassified 1237
139 Ga0157370_10000047 3300013104 Bacteria 124911
140 Ga0157370_10000609 3300013104 Bacteria 44536
141 Ga0157370_10020132 3300013104 Bacteria 6670
142 Ga0157374_10001332 3300013296 Bacteria 21001
143 Ga0157374_10044136 3300013296 Bacteria 4120
144 Ga0157378_10001946 3300013297 Bacteria 18531
145 Ga0157378_10087689 3300013297 Bacteria 2823
146 Ga0163162_10184146 3300013306 Bacteria 2215
147 Ga0157372_10038018 3300013307 Bacteria 5311
148 Ga0157372_10044082 3300013307 Unclassified 4942
149 Ga0157372_10051072 3300013307 Bacteria 4601
150 Ga0157372_10068880 3300013307 Bacteria 3979
151 Ga0157372_10490666 3300013307 Bacteria 1432
152 Ga0157375_10002116 3300013308 Bacteria 17158
153 Ga0157375_10131271 3300013308 Bacteria 2624
154 Ga0157377_10040710 3300014745 Bacteria 2574
155 Ga0157379_10050521 3300014968 Bacteria 3712
156 Ga0157376_10000220 3300014969 Bacteria 39580
157 Ga0163161_10003309 3300017792 Bacteria 11312
158 Ga0163161_10007330 3300017792 Bacteria 7612
159 Ga0209646_1006048 3300025246 Bacteria 2056
160 Ga0209677_103653 3300025253 Bacteria 4850
161 Ga0209148_1000059 3300025254 Bacteria 350224
162 Ga0209148_1001475 3300025254 Bacteria 11828
163 Ga0209565_1000007 3300025263 Bacteria 784361
164 Ga0209455_1000316 3300025272 Bacteria 48052
165 Ga0209673_1001591 3300025273 Bacteria 20040
166 Ga0209675_1012943 3300025291 Bacteria 2648
167 Ga0209758_1001360 3300025297 Bacteria 29314
168 Ga0209050_1000039 3300025298 Bacteria 410069
169 Ga0209050_1002621 3300025298 Bacteria 14803
170 Ga0209256_1000008 3300025299 Bacteria 975723
171 Ga0209257_1000051 3300025304 Bacteria 434166
172 Ga0209257_1001755 3300025304 Bacteria 24052
173 Ga0209257_1014698 3300025304 Bacteria 3335
174 Ga0207656_10009996 3300025321 Bacteria 3536
175 Ga0207680_10073713 3300025903 Bacteria 2123
176 Ga0207647_10000401 3300025904 Bacteria 35481
177 Ga0207647_10001308 3300025904 Bacteria 19149
178 Ga0207647_10002960 3300025904 Bacteria 12781
179 Ga0207647_10009115 3300025904 Bacteria 7065
180 Ga0207647_10010568 3300025904 Bacteria 6513
181 Ga0207647_10052272 3300025904 Bacteria 2522
182 Ga0207645_10002339 3300025907 Bacteria 14958
183 Ga0207705_10000025 3300025909 Bacteria 259826
184 Ga0207705_10000122 3300025909 Bacteria 86442
185 Ga0207705_10003671 3300025909 Bacteria 11676
186 Ga0207705_10176338 3300025909 Unclassified 1611
187 Ga0207654_10000473 3300025911 Bacteria 22991
188 Ga0207695_10003646 3300025913 Bacteria 21515
189 Ga0207671_10003146 3300025914 Bacteria 16741
190 Ga0207671_10065195 3300025914 Bacteria 2708
191 Ga0207657_10001482 3300025919 Bacteria 25109
192 Ga0207657_10003314 3300025919 Bacteria 17226
193 Ga0207657_10015670 3300025919 Bacteria 7332
194 Ga0207649_10002930 3300025920 Bacteria 9395
195 Ga0207652_10001940 3300025921 Bacteria 17897
196 Ga0207694_10022087 3300025924 Bacteria 4825
197 Ga0207694_10057334 3300025924 Bacteria 3028
198 Ga0207659_10066192 3300025926 Bacteria 2621
199 Ga0207687_10002006 3300025927 Bacteria 13974
200 Ga0207644_10043353 3300025931 Bacteria 3192
201 Ga0207644_10285313 3300025931 Bacteria 1326
202 Ga0207690_10000484 3300025932 Bacteria 25673
203 Ga0207690_10124869 3300025932 Bacteria 1875
204 Ga0207690_10171792 3300025932 Bacteria 1625
205 Ga0207706_10004654 3300025933 Bacteria 12858
206 Ga0207706_10004707 3300025933 Bacteria 12781
207 Ga0207706_10022519 3300025933 Bacteria 5654
208 Ga0207706_10103254 3300025933 Bacteria 2508
209 Ga0207706_10105275 3300025933 Bacteria 2482
210 Ga0207686_10000553 3300025934 Bacteria 24058
211 Ga0207686_10469026 3300025934 Unclassified 972
212 Ga0207709_10000202 3300025935 Bacteria 78416
213 Ga0207709_10000254 3300025935 Bacteria 63973
214 Ga0207669_10000028 3300025937 Bacteria 88915
215 Ga0207669_10042492 3300025937 Bacteria 2654
216 Ga0207669_10116952 3300025937 Unclassified 1801
217 Ga0207704_10000133 3300025938 Bacteria 40529
218 Ga0207691_10110357 3300025940 Bacteria 2447
219 Ga0207691_10454557 3300025940 Bacteria 1090
220 Ga0207711_10000724 3300025941 Bacteria 32484
221 Ga0207711_10019167 3300025941 Bacteria 5696
222 Ga0207689_10002392 3300025942 Bacteria 17494
223 Ga0207679_10030412 3300025945 Bacteria 3770
224 Ga0207679_10102144 3300025945 Bacteria 2244
225 Ga0207667_10000002 3300025949 Bacteria 895662
226 Ga0207667_10059163 3300025949 Bacteria 4015
227 Ga0207667_10089008 3300025949 Bacteria 3192
228 Ga0207667_10187648 3300025949 Bacteria 2122
229 Ga0207651_10000012 3300025960 Bacteria 189928
230 Ga0207712_10058713 3300025961 Bacteria 2719
231 Ga0207640_10001855 3300025981 Bacteria 11323
232 Ga0207677_10000323 3300026023 Bacteria 34875
233 Ga0207639_10017179 3300026041 Bacteria 5128
234 Ga0207678_10000780 3300026067 Bacteria 29093
235 Ga0207678_10349692 3300026067 Unclassified 1275
236 Ga0207702_10000824 3300026078 Bacteria 32722
237 Ga0207702_10002599 3300026078 Bacteria 16966
238 Ga0207648_10000628 3300026089 Bacteria 39541
239 Ga0207648_10504727 3300026089 Unclassified 1107
240 Ga0207674_10004152 3300026116 Bacteria 17512
241 Ga0207674_10063920 3300026116 Bacteria 3713
242 Ga0207674_10067011 3300026116 Bacteria 3615
243 Ga0207674_10254580 3300026116 Bacteria 1703
244 Ga0207674_10693065 3300026116 Bacteria 983
245 Ga0207675_100005971 3300026118 Bacteria 11602
246 Ga0207683_10000312 3300026121 Bacteria 44059
247 Ga0207698_10000841 3300026142 Bacteria 17794
248 Ga0207698_10000852 3300026142 Bacteria 17708
249 Ga0207698_10009012 3300026142 Bacteria 6336
250 Ga0207698_10213821 3300026142 Bacteria 1737
251 Ga0316177_1151280 3300030731 Bacteria 2236
252 Ga0265340_10004805 3300031247 Bacteria 7522
253 Ga0307508_10001403 3300031616 Bacteria 27135
254 Ga0307412_10299476 3300031911 Bacteria 1270
255 Ga0307409_100420257 3300031995 Bacteria 1282
256 Ga0307414_10042125 3300032004 Bacteria 3099
257 Ga0307411_10087573 3300032005 Unclassified 2163
258 Ga0395900_0146943 3300037418 Bacteria 2410
259 Ga0395898_0504641 3300037466 Bacteria 1150
260 Ga0395901_0339844 3300038443 Bacteria 1551
261 Ga0439436_0013401 3300041404 Bacteria 2480
262 Ga0439461_0003399 3300041410 Bacteria 2618
263 Ga0439461_0006767 3300041410 Bacteria 2004
264 Ga0439466_0087785 3300041411 Bacteria 977
265 Ga0439465_0000763 3300041413 Bacteria 9988
266 Ga0439465_0010463 3300041413 Unclassified 2913
267 Ga0451841_0271634 3300041498 Bacteria 1159
268 Ga0439431_0001012 3300041997 Bacteria 6111
269 Ga0439431_0006134 3300041997 Bacteria 2655
270 Ga0439442_010437 3300042002 Bacteria 1883
271 Ga0439445_0000117 3300042004 Bacteria 13488
272 Ga0439445_0012074 3300042004 Unclassified 2069
273 Ga0439448_0002529 3300042005 Bacteria 4984
274 Ga0439448_0008541 3300042005 Bacteria 3002
275 Ga0439432_000523 3300042006 Bacteria 14299
276 Ga0439452_009367 3300042010 Bacteria 2887
277 Ga0439455_0003377 3300042012 Bacteria 3041
278 Ga0439455_0048624 3300042012 Bacteria 1103
279 Ga0439462_0000080 3300042015 Bacteria 14594
280 Ga0439462_0003024 3300042015 Bacteria 3994
281 Ga0439446_0005313 3300042156 Bacteria 3310
282 Ga0439458_0002737 3300042157 Bacteria 4247
283 Ga0439434_0000850 3300042435 Bacteria 8810
284 Ga0466969_0066863 3300044656 Bacteria 1735
285 Ga0466972_0002882 3300044658 Bacteria 8511
286 Ga0466972_0006669 3300044658 Bacteria 5793
287 Ga0466966_0179217 3300044684 Bacteria 1286
288 Ga0466961_0011905 3300044693 Bacteria 5560
289 Ga0466961_0020975 3300044693 Bacteria 4204
290 Ga0466963_0002431 3300044694 Bacteria 10419
291 Ga0466963_0053456 3300044694 Bacteria 2681
292 Ga0466964_0017717 3300044706 Bacteria 2727
293 Ga0466964_0020176 3300044706 Bacteria 2565
294 Ga0466971_0001958 3300044719 Bacteria 8715
295 Ga0466971_0051373 3300044719 Bacteria 1855
296 Ga0466968_0028467 3300044735 Bacteria 2304
297 Ga0466970_0076856 3300044765 Bacteria 1799
298 Ga0466970_0132113 3300044765 Bacteria 1372
299 Ga0466957_0064862 3300044842 Bacteria 2248
300 Ga0466960_0004332 3300044901 Bacteria 5537
301 Ga0466960_0008905 3300044901 Bacteria 4123
302 Ga0466959_0013193 3300045049 Bacteria 5986
303 Ga0466959_0034986 3300045049 Bacteria 3715
304 Ga0466958_0040445 3300045836 Bacteria 2802
305 Ga0466958_0051136 3300045836 Bacteria 2501
306 Ga0466958_0400181 3300045836 Bacteria 886
307 Ga0466967_0007838 3300045976 Bacteria 7759
308 Ga0495627_008731 3300046453 Bacteria 3776
309 Ga0495585_0129826 3300046492 Bacteria 1327
310 Ga0495596_0033120 3300046500 Bacteria 2057
311 Ga0495583_0006975 3300046506 Bacteria 7238
312 Ga0495583_0095236 3300046506 Bacteria 1277
313 Ga0495643_0000859 3300046522 Bacteria 32706
314 Ga0495648_0000743 3300046524 Bacteria 34808
315 Ga0495633_0000148 3300046558 Bacteria 93134
316 Ga0495668_0000007 3300046616 Bacteria 552902
317 Ga0495611_0031690 3300046648 Bacteria 2328
318 Ga0495625_0000107 3300046660 Bacteria 125777
319 Ga0495625_0010827 3300046660 Bacteria 7504
320 Ga0495625_0141139 3300046660 Bacteria 1625
321 Ga0495671_0061058 3300046692 Bacteria 1860
322 Ga0495649_0014975 3300046694 Bacteria 4429
323 Ga0495683_0001819 3300047323 Bacteria 13421
324 Ga0495683_0013451 3300047323 Bacteria 4280
325 Ga0495687_000234 3300047443 Bacteria 76988
326 Ga0501241_001673 3300049758 Bacteria 4432
327 Ga0501241_003681 3300049758 Bacteria 2891
328 nmdc:mga0k408_58444_c1 3300050493 Bacteria 2239
329 nmdc:mga09592_170515_c1 3300050508 Bacteria 1882
330 Ga0500643_005462 3300053087 Bacteria 5478
331 Ga0500642_0104208 3300053130 Bacteria 1321
332 Ga0500658_0000191 3300053134 Bacteria 29300
333 Ga0500658_0010202 3300053134 Bacteria 3462
334 Ga0500658_0012801 3300053134 Bacteria 3098
335 Ga0500568_0024981 3300053139 Bacteria 2525
336 Ga0466962_0000884 3300061719 Bacteria 13612
337 2644127828 2643221622 Bacteria 4212502
338 2809064444 2808606401 Bacteria 4586670
339 2809080391 2808606404 Bacteria 4652788
340 2809084776 2808606405 Bacteria 4586632
341 2852681351 2852680915 Bacteria 4100189
342 2880519219 2880518877 Bacteria 5012590
343 Ga0439448_0004476
344 ARcpr5oldR_c004587
345 ARCol0yngRDRAFT_1003240
346 JGI24736J21556_1002289
347 JGI24736J21556_1008916
348 JGI24736J21556_1023848
349 JGI24741J21665_1000706
350 JGI24740J21852_10002218
351 JGI24740J21852_10013056
352 JGI24739J22299_10000031
353 JGI24739J22299_10000746
354 JGI24739J22299_10000764
355 JGI24739J22299_10008725
356 JGI24739J22299_10020574
357 JGI24737J22298_10000100
358 JGI24737J22298_10000146
359 JGI24737J22298_10001570
360 JGI24743J22301_10026854
361 JGI24735J21928_10000792
362 JGI24735J21928_10001534
363 JGI24735J21928_10003739
364 JGI24735J21928_10006701
365 JGI24735J21928_10008402
366 JGI24738J21930_10000047
367 JGI24738J21930_10000266
368 JGI25153J46596_10021206
369 rootH1_10044016
370 rootH1_10053464
371 rootH1_10087000
372 rootH2_10023938
373 rootH2_10097667
374 rootL2_10156011
375 rootL2_10250178
376 Ga0055529_1004838
377 Ga0055537_1000628
378 Ga0055524_1000226
379 Ga0055530_10000106
380 Ga0055530_10029776
381 Ga0055531_10000012
382 Ga0055531_10002131
383 Ga0065165_1000705
384 Ga0065165_1007060
385 Ga0065165_1009470
386 Ga0070658_10000742
387 Ga0070658_10002405
388 Ga0070658_10203311
389 Ga0070676_10001184
390 Ga0068869_100000850
391 Ga0070666_10008534
392 Ga0068868_100000298
393 Ga0070660_100000486
394 Ga0070660_100025736
395 Ga0070660_100065839
396 Ga0070661_100000776
397 Ga0070671_100019510
398 Ga0070671_100198992
399 Ga0070674_100001346
400 Ga0070674_100020172
401 Ga0070674_100033638
402 Ga0070674_100110343
403 Ga0070673_100000094
404 Ga0070673_100110080
405 Ga0070659_100084607
406 Ga0070659_100169663
407 Ga0070659_100177286
408 Ga0070659_100358085
409 Ga0070678_100000036
410 Ga0070662_100000479
411 Ga0070662_100003496
412 Ga0070662_100031380
413 Ga0070662_100067433
414 Ga0070662_100101215
415 Ga0070662_100166812
416 Ga0068867_100000202
417 Ga0070699_100238258
418 Ga0070679_100000236
419 Ga0070684_100096067
420 Ga0068853_100121672
421 Ga0068853_100744850
422 Ga0070672_100018673
423 Ga0070672_100468842
424 Ga0068855_100049460
425 Ga0068855_100061877
426 Ga0070664_100001770
427 Ga0070664_100107504
428 Ga0068857_100007510
429 Ga0068857_100052357
430 Ga0068857_100403420
431 Ga0068856_100001964
432 Ga0068856_100016062
433 Ga0068856_100131836
434 Ga0068852_100000838
435 Ga0068852_100240690
436 Ga0068859_100003574
437 Ga0068859_100154228
438 Ga0068861_100000004
439 Ga0068851_10020581
440 Ga0068851_10241137
441 Ga0068858_100153489
442 Ga0075369_10043431
443 Ga0097621_100074538
444 Ga0075428_100698238
445 Ga0075429_100020960
446 Ga0068865_100000123
447 Ga0097620_100003574
448 Ga0097620_100154230
449 Ga0105240_10127506
450 Ga0105245_10000779
451 Ga0114129_10025220
452 Ga0105243_10000058
453 Ga0105243_10000794
454 Ga0105241_10004263
455 Ga0105242_10004107
456 Ga0105248_10001310
457 Ga0105248_10034468
458 Ga0105237_10032978
459 Ga0105237_10051292
460 Ga0105238_10048425
461 Ga0105238_10271452
462 Ga0105249_10004998
463 Ga0105249_10068163
464 Ga0105239_10064106
465 Ga0105239_10443827
466 Ga0105246_10001120
467 Ga0105246_10001816
468 Ga0105246_10145997
469 Ga0157326_1002300
470 Ga0157373_10005079
471 Ga0157373_10061829
472 Ga0157373_10114739
473 Ga0157373_10174102
474 Ga0157373_10259263
475 Ga0157373_10324342
476 Ga0157371_10000032
477 Ga0157371_10053365
478 Ga0157371_10259249
479 Ga0157371_10265920
480 Ga0157370_10000047
481 Ga0157370_10000609
482 Ga0157370_10020132
483 Ga0157374_10001332
484 Ga0157374_10044136
485 Ga0157378_10001946
486 Ga0157378_10087689
487 Ga0163162_10184146
488 Ga0157372_10038018
489 Ga0157372_10044082
490 Ga0157372_10051072
491 Ga0157372_10068880
492 Ga0157372_10490666
493 Ga0157375_10002116
494 Ga0157375_10131271
495 Ga0157377_10040710
496 Ga0157379_10050521
497 Ga0157376_10000220
498 Ga0163161_10003309
499 Ga0163161_10007330
500 Ga0209646_1006048
501 Ga0209677_103653
502 Ga0209148_1000059
503 Ga0209148_1001475
504 Ga0209565_1000007
505 Ga0209455_1000316
506 Ga0209673_1001591
507 Ga0209675_1012943
508 Ga0209758_1001360
509 Ga0209050_1000039
510 Ga0209050_1002621
511 Ga0209256_1000008
512 Ga0209257_1000051
513 Ga0209257_1001755
514 Ga0209257_1014698
515 Ga0207656_10009996
516 Ga0207680_10073713
517 Ga0207647_10000401
518 Ga0207647_10001308
519 Ga0207647_10002960
520 Ga0207647_10009115
521 Ga0207647_10010568
522 Ga0207647_10052272
523 Ga0207645_10002339
524 Ga0207705_10000025
525 Ga0207705_10000122
526 Ga0207705_10003671
527 Ga0207705_10176338
528 Ga0207654_10000473
529 Ga0207695_10003646
530 Ga0207671_10003146
531 Ga0207671_10065195
532 Ga0207657_10001482
533 Ga0207657_10003314
534 Ga0207657_10015670
535 Ga0207649_10002930
536 Ga0207652_10001940
537 Ga0207694_10022087
538 Ga0207694_10057334
539 Ga0207659_10066192
540 Ga0207687_10002006
541 Ga0207644_10043353
542 Ga0207644_10285313
543 Ga0207690_10000484
544 Ga0207690_10124869
545 Ga0207690_10171792
546 Ga0207706_10004654
547 Ga0207706_10004707
548 Ga0207706_10022519
549 Ga0207706_10103254
550 Ga0207706_10105275
551 Ga0207686_10000553
552 Ga0207686_10469026
553 Ga0207709_10000202
554 Ga0207709_10000254
555 Ga0207669_10000028
556 Ga0207669_10042492
557 Ga0207669_10116952
558 Ga0207704_10000133
559 Ga0207691_10110357
560 Ga0207691_10454557
561 Ga0207711_10000724
562 Ga0207711_10019167
563 Ga0207689_10002392
564 Ga0207679_10030412
565 Ga0207679_10102144
566 Ga0207667_10000002
567 Ga0207667_10059163
568 Ga0207667_10089008
569 Ga0207667_10187648
570 Ga0207651_10000012
571 Ga0207712_10058713
572 Ga0207640_10001855
573 Ga0207677_10000323
574 Ga0207639_10017179
575 Ga0207678_10000780
576 Ga0207678_10349692
577 Ga0207702_10000824
578 Ga0207702_10002599
579 Ga0207648_10000628
580 Ga0207648_10504727
581 Ga0207674_10004152
582 Ga0207674_10063920
583 Ga0207674_10067011
584 Ga0207674_10254580
585 Ga0207674_10693065
586 Ga0207675_100005971
587 Ga0207683_10000312
588 Ga0207698_10000841
589 Ga0207698_10000852
590 Ga0207698_10009012
591 Ga0207698_10213821
592 Ga0316177_1151280
593 Ga0265340_10004805
594 Ga0307508_10001403
595 Ga0307412_10299476
596 Ga0307409_100420257
597 Ga0307414_10042125
598 Ga0307411_10087573
599 Ga0395900_0146943
600 Ga0395898_0504641
601 Ga0395901_0339844
602 Ga0439436_0013401
603 Ga0439461_0003399
604 Ga0439461_0006767
605 Ga0439466_0087785
606 Ga0439465_0000763
607 Ga0439465_0010463
608 Ga0451841_0271634
609 Ga0439431_0001012
610 Ga0439431_0006134
611 Ga0439442_010437
612 Ga0439445_0000117
613 Ga0439445_0012074
614 Ga0439448_0002529
615 Ga0439448_0008541
616 Ga0439432_000523
617 Ga0439452_009367
618 Ga0439455_0003377
619 Ga0439455_0048624
620 Ga0439462_0000080
621 Ga0439462_0003024
622 Ga0439446_0005313
623 Ga0439458_0002737
624 Ga0439434_0000850
625 Ga0466969_0066863
626 Ga0466972_0002882
627 Ga0466972_0006669
628 Ga0466966_0179217
629 Ga0466961_0011905
630 Ga0466961_0020975
631 Ga0466963_0002431
632 Ga0466963_0053456
633 Ga0466964_0017717
634 Ga0466964_0020176
635 Ga0466971_0001958
636 Ga0466971_0051373
637 Ga0466968_0028467
638 Ga0466970_0076856
639 Ga0466970_0132113
640 Ga0466957_0064862
641 Ga0466960_0004332
642 Ga0466960_0008905
643 Ga0466959_0013193
644 Ga0466959_0034986
645 Ga0466958_0040445
646 Ga0466958_0051136
647 Ga0466958_0400181
648 Ga0466967_0007838
649 Ga0495627_008731
650 Ga0495585_0129826
651 Ga0495596_0033120
652 Ga0495583_0006975
653 Ga0495583_0095236
654 Ga0495643_0000859
655 Ga0495648_0000743
656 Ga0495633_0000148
657 Ga0495668_0000007
658 Ga0495611_0031690
659 Ga0495625_0000107
660 Ga0495625_0010827
661 Ga0495625_0141139
662 Ga0495671_0061058
663 Ga0495649_0014975
664 Ga0495683_0001819
665 Ga0495683_0013451
666 Ga0495687_000234
667 Ga0501241_001673
668 Ga0501241_003681
669 nmdc:mga0k408_58444_c1
670 nmdc:mga09592_170515_c1
671 Ga0500643_005462
672 Ga0500642_0104208
673 Ga0500658_0000191
674 Ga0500658_0010202
675 Ga0500658_0012801
676 Ga0500568_0024981
677 Ga0466962_0000884
678 2644127828
679 2809064444
680 2809080391
681 2809084776
682 2852681351
683 2880519219

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04397

LytTR

LytTr DNA-binding domain

174

271

0.97

PF00072

Response_reg

Response regulator receiver domain

18

127

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d6w-assembly1.cif.gz_A lyttr dna-binding domain of putative methyl-accepting/dna response regulator from bacillus cereus. 0.9154 156 262
2qv0-assembly1.cif.gz_A crystal structure of the response regulatory domain of protein mrke from klebsiella pneumoniae 0.9021 8 126
4e7p-assembly2.cif.gz_A crystal structure of receiver domain of putative narl family response regulator spr1814 from streptococcus pneumoniae in the presence of the phosphoryl analog beryllofluoride 0.9007 8 124
3ffw-assembly1.cif.gz_A crystal structure of chey triple mutant f14q, n59k, e89y complexed with bef3- and mn2+ 0.8983 8 126
6m8o-assembly1.cif.gz_A crystal structure of the receiver domain of lytr from staphylococcus aureus 0.8963 8 122
ID Description Score Start End Superfamily
af_Q2FVQ7_36_146_2.40.50.1020 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);LytTr DNA-binding domain 0.9342 155 261 2.40.50.1020
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9317 8 88 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9237 9 88 3.40.50.2300
af_P60611_135_244_2.40.50.1020 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);LytTr DNA-binding domain 0.9124 157 262 2.40.50.1020
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9099 8 88 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A4Q3FDX0-F1-model_v4 Response regulator 0.9532 8 85 GO:0000160
AF-A0A4Q5YEC4-F1-model_v4 Response regulator 0.95 8 126 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7C7WMN0-F1-model_v4 LytTR family transcriptional regulator 0.9442 173 262 GO:0000156
GO:0003677
AF-A0A7C7U9T4-F1-model_v4 Response regulator 0.9348 1 77 GO:0000160
AF-A0A658JJ30-F1-model_v4 deleted 0.9281 157 262

Map