F416115

General Info

Members Datasets Scaffolds Average Seq Length
344 195 328 248

Family's Representative Sequence

Representative Sequence 3300046684|Ga0495669_0005768|Ga0495669_0005768_2486_3352
Length 288
Sequence MGLSLLAVLPPDARSPRRNRHGDIAAGLRQSNKCGTLIDMDRRPALEDASPQPDLWAEAQRAPAERPHYAGHRDRLRERAVAGGLAALPDYEVLELLLFRSIPRGDVKPLAKQLIARFGSLGAVLGADRAALKTVRGVGEAVALDLSLVQEATLRAAREQTARRTVISSWSALLAYVKAALAHEPREQVRVLFLDKKNQLIADEVTGEGTVDHAPVYPRELMRRALELSASALILVHNHPSGDPTPSSADVEITRQIVEAGRALRIAVHDHLVVGRDGIASFKALGLL

Samples

Sample ID Description Type Environment
1 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
2 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
3 2643221584 Caulobacter sp. Root656 Isolate Unclassified
4 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
5 2643221640 Caulobacter sp. Root342 Isolate Unclassified
6 2643221642 Caulobacter sp. Root343 Isolate Unclassified
7 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
8 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
9 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
10 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
11 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
12 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
13 2851153111 Caulobacter radicis 736 Isolate Unclassified
14 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
15 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
16 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
17 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
20 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
24 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
25 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
28 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
29 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
68 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
69 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
71 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
108 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
109 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
110 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
117 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
118 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
119 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
120 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
123 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
124 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
125 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
126 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
127 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
130 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
131 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
135 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
136 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
137 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
138 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
139 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
140 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
148 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
153 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
168 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
169 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
170 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
171 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
172 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
175 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
176 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
177 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
178 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
179 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
180 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
181 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
184 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
189 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
190 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
191 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
192 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
193 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
194 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
195 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.35
Metatranscriptomes 0
Isolates 4.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.9
Nodule 0.29
Rhizoplane 2.33
Rhizosphere 69.77
Stem 0
Stem Tuber 0
Unclassified 8.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10033000 3300003215 Bacteria 1716
2 Ga0055530_10000014 3300003791 Bacteria 151346
3 Ga0055530_10006902 3300003791 Bacteria 4919
4 Ga0055531_10001024 3300003794 Bacteria 22123
5 Ga0055531_10001689 3300003794 Bacteria 15858
6 Ga0055531_10003345 3300003794 Bacteria 10257
7 Ga0065165_1000147 3300005262 Bacteria 122698
8 Ga0065165_1004590 3300005262 Bacteria 8422
9 Ga0070658_10153555 3300005327 Bacteria 1929
10 Ga0070658_10205783 3300005327 Bacteria 1661
11 Ga0070670_100000269 3300005331 Bacteria 46231
12 Ga0068869_100341439 3300005334 Bacteria 1219
13 Ga0070666_10040258 3300005335 Bacteria 3119
14 Ga0070680_100021695 3300005336 Bacteria 5107
15 Ga0070680_100062577 3300005336 Bacteria 3047
16 Ga0070660_100017126 3300005339 Bacteria 5276
17 Ga0070660_100143119 3300005339 Bacteria 1920
18 Ga0070660_100374802 3300005339 Bacteria 1174
19 Ga0070660_100500339 3300005339 Bacteria 1011
20 Ga0070668_100001745 3300005347 Bacteria 15823
21 Ga0070668_100002109 3300005347 Bacteria 14549
22 Ga0070668_100005199 3300005347 Bacteria 9652
23 Ga0070668_100012655 3300005347 Bacteria 6281
24 Ga0070668_100048607 3300005347 Bacteria 3263
25 Ga0070669_100487458 3300005353 Bacteria 1021
26 Ga0070671_100100709 3300005355 Bacteria 2424
27 Ga0070659_100000110 3300005366 Bacteria 60436
28 Ga0070659_100002546 3300005366 Bacteria 12964
29 Ga0070659_100026952 3300005366 Bacteria 4424
30 Ga0070667_100000185 3300005367 Bacteria 74783
31 Ga0070667_100016439 3300005367 Bacteria 6124
32 Ga0070667_100050412 3300005367 Bacteria 3508
33 Ga0070667_100068482 3300005367 Bacteria 3020
34 Ga0070681_10011588 3300005458 Bacteria 8727
35 Ga0070681_10025884 3300005458 Bacteria 5898
36 Ga0070679_100039579 3300005530 Bacteria 4685
37 Ga0070679_100392672 3300005530 Bacteria 1334
38 Ga0068853_100044140 3300005539 Bacteria 3816
39 Ga0068853_100088384 3300005539 Bacteria 2720
40 Ga0070665_100000183 3300005548 Bacteria 111514
41 Ga0070665_100002881 3300005548 Bacteria 18592
42 Ga0070665_100005664 3300005548 Bacteria 12839
43 Ga0070665_100032816 3300005548 Bacteria 5224
44 Ga0070665_100191623 3300005548 Bacteria 2045
45 Ga0068855_100017537 3300005563 Bacteria 8609
46 Ga0068855_100081921 3300005563 Bacteria 3740
47 Ga0068855_100202948 3300005563 Bacteria 2231
48 Ga0068854_100366158 3300005578 Bacteria 1184
49 Ga0068856_100181496 3300005614 Bacteria 2118
50 Ga0068859_100028497 3300005617 Bacteria 5599
51 Ga0068859_100077003 3300005617 Bacteria 3376
52 Ga0068859_100265326 3300005617 Bacteria 1809
53 Ga0068864_100000096 3300005618 Bacteria 88306
54 Ga0068864_100000292 3300005618 Bacteria 44496
55 Ga0068866_10170839 3300005718 Bacteria 1276
56 Ga0068861_100121487 3300005719 Bacteria 2108
57 Ga0068861_100217718 3300005719 Bacteria 1612
58 Ga0068863_100000041 3300005841 Bacteria 157478
59 Ga0068863_100000489 3300005841 Bacteria 40235
60 Ga0068858_100000494 3300005842 Bacteria 41195
61 Ga0068858_100015906 3300005842 Bacteria 7069
62 Ga0068860_100000032 3300005843 Bacteria 251624
63 Ga0068860_100000644 3300005843 Bacteria 40758
64 Ga0068860_100084562 3300005843 Bacteria 3018
65 Ga0068862_100000469 3300005844 Bacteria 43575
66 Ga0068862_100019141 3300005844 Bacteria 5709
67 Ga0068862_100022900 3300005844 Bacteria 5229
68 Ga0068862_100026473 3300005844 Bacteria 4875
69 Ga0068862_100239559 3300005844 Bacteria 1649
70 Ga0070717_10099914 3300006028 Bacteria 2462
71 Ga0070717_10260922 3300006028 Bacteria 1533
72 Ga0075367_10023541 3300006178 Bacteria 3466
73 Ga0075370_10123873 3300006353 Bacteria 1506
74 Ga0068865_100001330 3300006881 Bacteria 14397
75 Ga0097620_100028497 3300006931 Bacteria 5599
76 Ga0097620_100077002 3300006931 Bacteria 3376
77 Ga0097620_100265311 3300006931 Bacteria 1809
78 Ga0079104_1033669 3300006946 Bacteria 1252
79 Ga0105240_10002875 3300009093 Bacteria 27236
80 Ga0105240_10070018 3300009093 Bacteria 4340
81 Ga0105240_10082886 3300009093 Bacteria 3938
82 Ga0105240_10209797 3300009093 Bacteria 2277
83 Ga0105248_10000125 3300009177 Bacteria 88470
84 Ga0105248_10003232 3300009177 Bacteria 18071
85 Ga0105248_10017919 3300009177 Bacteria 7814
86 Ga0105237_10563732 3300009545 Bacteria 1146
87 Ga0105238_10060097 3300009551 Bacteria 3806
88 Ga0105249_10000544 3300009553 Bacteria 34900
89 Ga0105249_10385894 3300009553 Bacteria 1428
90 Ga0105239_10282477 3300010375 Bacteria 1869
91 Ga0105239_10460710 3300010375 Bacteria 1443
92 Ga0157373_10003448 3300013100 Bacteria 11963
93 Ga0157373_10009597 3300013100 Bacteria 7143
94 Ga0163162_10157513 3300013306 Bacteria 2392
95 Ga0157372_10039055 3300013307 Bacteria 5239
96 Ga0163163_10768372 3300014325 Bacteria 1027
97 Ga0163163_10787145 3300014325 Bacteria 1014
98 Ga0157380_10124785 3300014326 Bacteria 2186
99 Ga0157379_10248046 3300014968 Bacteria 1616
100 Ga0157379_10464864 3300014968 Bacteria 1169
101 Ga0163161_10162870 3300017792 Bacteria 1701
102 Ga0163161_10663931 3300017792 Bacteria 865
103 Ga0213876_10082093 3300021384 Bacteria 1705
104 Ga0213876_10186769 3300021384 Bacteria 1102
105 Ga0213875_10049527 3300021388 Bacteria 1969
106 Ga0209233_1043572 3300025261 Bacteria 955
107 Ga0209676_1000233 3300025292 Bacteria 120247
108 Ga0209758_1001561 3300025297 Bacteria 26266
109 Ga0209758_1009192 3300025297 Bacteria 6212
110 Ga0209050_1000034 3300025298 Bacteria 433906
111 Ga0209050_1000624 3300025298 Bacteria 55344
112 Ga0209256_1004814 3300025299 Bacteria 8187
113 Ga0209257_1000052 3300025304 Bacteria 430947
114 Ga0209257_1000074 3300025304 Bacteria 325641
115 Ga0209257_1000100 3300025304 Bacteria 253399
116 Ga0209257_1000265 3300025304 Bacteria 120247
117 Ga0209257_1001452 3300025304 Bacteria 28026
118 Ga0207680_10010260 3300025903 Bacteria 4681
119 Ga0207705_10020422 3300025909 Bacteria 4733
120 Ga0207705_10228186 3300025909 Bacteria 1416
121 Ga0207707_10030922 3300025912 Bacteria 4683
122 Ga0207707_10044245 3300025912 Bacteria 3882
123 Ga0207695_10000722 3300025913 Bacteria 64180
124 Ga0207695_10001126 3300025913 Bacteria 46415
125 Ga0207695_10022839 3300025913 Bacteria 7087
126 Ga0207695_10050473 3300025913 Bacteria 4376
127 Ga0207695_10307157 3300025913 Bacteria 1477
128 Ga0207660_10003732 3300025917 Bacteria 9923
129 Ga0207657_10014066 3300025919 Bacteria 7830
130 Ga0207657_10066911 3300025919 Bacteria 3057
131 Ga0207657_10342464 3300025919 Bacteria 1180
132 Ga0207657_10415029 3300025919 Bacteria 1058
133 Ga0207652_10042979 3300025921 Bacteria 3847
134 Ga0207681_10143293 3300025923 Bacteria 1782
135 Ga0207650_10000616 3300025925 Bacteria 28434
136 Ga0207650_10188937 3300025925 Bacteria 1645
137 Ga0207644_10113896 3300025931 Bacteria 2049
138 Ga0207690_10000370 3300025932 Bacteria 29835
139 Ga0207690_10005909 3300025932 Bacteria 7247
140 Ga0207690_10010905 3300025932 Bacteria 5417
141 Ga0207706_10189041 3300025933 Bacteria 1808
142 Ga0207704_10028575 3300025938 Bacteria 3096
143 Ga0207711_10000560 3300025941 Bacteria 37892
144 Ga0207711_10005780 3300025941 Bacteria 10448
145 Ga0207711_10113206 3300025941 Bacteria 2415
146 Ga0207689_10278816 3300025942 Bacteria 1384
147 Ga0207667_10009945 3300025949 Bacteria 11157
148 Ga0207667_10121445 3300025949 Bacteria 2692
149 Ga0207667_10994817 3300025949 Bacteria 826
150 Ga0207712_10001498 3300025961 Bacteria 15832
151 Ga0207712_10100881 3300025961 Bacteria 2146
152 Ga0207712_10475304 3300025961 Bacteria 1064
153 Ga0207668_10000003 3300025972 Bacteria 206959
154 Ga0207668_10000290 3300025972 Bacteria 33028
155 Ga0207668_10003315 3300025972 Bacteria 9430
156 Ga0207668_10016945 3300025972 Bacteria 4559
157 Ga0207668_10134070 3300025972 Bacteria 1895
158 Ga0207658_10000696 3300025986 Bacteria 29247
159 Ga0207658_10015673 3300025986 Bacteria 5202
160 Ga0207703_10000035 3300026035 Bacteria 183082
161 Ga0207703_10009026 3300026035 Bacteria 7852
162 Ga0207639_10084767 3300026041 Bacteria 2518
163 Ga0207639_10142809 3300026041 Bacteria 1996
164 Ga0207639_10296058 3300026041 Bacteria 1429
165 Ga0207641_10000027 3300026088 Bacteria 244787
166 Ga0207641_10000649 3300026088 Bacteria 37833
167 Ga0207648_10672029 3300026089 Bacteria 958
168 Ga0207676_10000093 3300026095 Bacteria 80702
169 Ga0207676_10002579 3300026095 Bacteria 12930
170 Ga0207676_10470168 3300026095 Bacteria 1189
171 Ga0207675_100038993 3300026118 Bacteria 4434
172 Ga0207675_100504121 3300026118 Bacteria 1205
173 Ga0268266_10000062 3300028379 Bacteria 253490
174 Ga0268266_10004796 3300028379 Bacteria 12839
175 Ga0268266_10009164 3300028379 Bacteria 8735
176 Ga0268265_10000365 3300028380 Bacteria 48959
177 Ga0268265_10005382 3300028380 Bacteria 8765
178 Ga0268265_10017704 3300028380 Bacteria 4924
179 Ga0268264_10000045 3300028381 Bacteria 364764
180 Ga0268264_10000118 3300028381 Bacteria 193487
181 Ga0268264_10664776 3300028381 Bacteria 1032
182 Ga0268264_10718910 3300028381 Bacteria 993
183 Ga0307517_10020079 3300028786 Bacteria 8535
184 Ga0307517_10081659 3300028786 Bacteria 2753
185 Ga0265338_10003962 3300028800 Bacteria 20398
186 Ga0265338_10011829 3300028800 Bacteria 10029
187 Ga0265338_10220422 3300028800 Bacteria 1417
188 Ga0307511_10009968 3300030521 Bacteria 9451
189 Ga0265327_10014129 3300031251 Bacteria 5242
190 Ga0265327_10014510 3300031251 Bacteria 5149
191 Ga0307513_10007934 3300031456 Bacteria 13658
192 Ga0307513_10009462 3300031456 Bacteria 12326
193 Ga0265314_10045524 3300031711 Bacteria 3102
194 Ga0307510_10031833 3300033180 Bacteria 5948
195 Ga0373926_0005997 3300035083 Bacteria 4022
196 Ga0373946_0099716 3300035171 Bacteria 1300
197 Ga0373927_0013837 3300035695 Bacteria 5355
198 Ga0373925_0000760 3300037068 Bacteria 29657
199 Ga0395899_0071789 3300037312 Bacteria 2533
200 Ga0395899_0152554 3300037312 Bacteria 1636
201 Ga0395900_0000004 3300037418 Bacteria 564908
202 Ga0395900_0046178 3300037418 Bacteria 4485
203 Ga0395900_0209516 3300037418 Bacteria 1969
204 Ga0395900_0338176 3300037418 Bacteria 1481
205 Ga0395898_0063954 3300037466 Bacteria 3569
206 Ga0395898_0159907 3300037466 Bacteria 2154
207 Ga0395898_0286794 3300037466 Bacteria 1570
208 Ga0395898_0356719 3300037466 Bacteria 1394
209 Ga0395905_0010223 3300037471 Bacteria 9144
210 Ga0395905_0019738 3300037471 Bacteria 6390
211 Ga0395905_0024528 3300037471 Bacteria 5691
212 Ga0395905_0408584 3300037471 Bacteria 1253
213 Ga0436364_0279533 3300037853 Bacteria 3571
214 Ga0395901_0000005 3300038443 Bacteria 544998
215 Ga0395901_0417653 3300038443 Bacteria 1376
216 Ga0395901_0535368 3300038443 Bacteria 1188
217 Ga0395901_0560064 3300038443 Bacteria 1157
218 Ga0436365_0777410 3300039437 Bacteria 1114
219 Ga0436365_1165756 3300039437 Bacteria 5883
220 Ga0436360_0280152 3300039438 Bacteria 923
221 Ga0466972_0187395 3300044658 Bacteria 970
222 Ga0466968_0066398 3300044735 Bacteria 1563
223 Ga0495629_0172780 3300046459 Bacteria 1499
224 Ga0495638_0000700 3300046460 Bacteria 36311
225 Ga0495585_0108797 3300046492 Bacteria 1476
226 Ga0495607_0027358 3300046501 Bacteria 3527
227 Ga0495583_0102542 3300046506 Bacteria 1220
228 Ga0495606_0012412 3300046507 Bacteria 6833
229 Ga0495610_0000073 3300046512 Bacteria 120193
230 Ga0495616_0000861 3300046513 Bacteria 22043
231 Ga0495620_0075336 3300046515 Bacteria 1373
232 Ga0495632_0002764 3300046519 Bacteria 13031
233 Ga0495632_0044839 3300046519 Bacteria 2205
234 Ga0495643_0002591 3300046522 Bacteria 14096
235 Ga0495644_0035814 3300046523 Bacteria 1873
236 Ga0495663_0077025 3300046525 Bacteria 1069
237 Ga0495654_0000018 3300046530 Bacteria 293124
238 Ga0495609_0018316 3300046538 Bacteria 3245
239 Ga0495609_0050172 3300046538 Bacteria 1861
240 Ga0495609_0214972 3300046538 Bacteria 800
241 Ga0495621_0104937 3300046539 Bacteria 1079
242 Ga0495597_0005233 3300046542 Bacteria 6898
243 Ga0495622_0024131 3300046557 Bacteria 2839
244 Ga0495668_0002546 3300046616 Bacteria 14844
245 Ga0495668_0011247 3300046616 Bacteria 5370
246 Ga0495668_0093543 3300046616 Bacteria 1646
247 Ga0495668_0147654 3300046616 Bacteria 1287
248 Ga0495611_0015193 3300046648 Bacteria 3291
249 Ga0495611_0212037 3300046648 Bacteria 902
250 Ga0495625_0009055 3300046660 Bacteria 8403
251 Ga0495625_0013909 3300046660 Bacteria 6443
252 Ga0495625_0041806 3300046660 Bacteria 3334
253 Ga0495669_0001002 3300046684 Bacteria 11782
254 Ga0495669_0005768 3300046684 Bacteria 5164
255 Ga0495669_0034615 3300046684 Bacteria 2227
256 Ga0495613_0001082 3300046689 Bacteria 20779
257 Ga0495672_0000409 3300047320 Bacteria 52134
258 Ga0495672_0022515 3300047320 Bacteria 4094
259 Ga0495672_0109796 3300047320 Bacteria 1482
260 Ga0495677_0100815 3300047445 Bacteria 1093
261 Ga0495679_010356 3300047446 Bacteria 3664
262 Ga0495686_0101060 3300047472 Bacteria 1739
263 Ga0496101_0037501 3300048904 Bacteria 3439
264 Ga0496102_0539647 3300048905 Bacteria 1089
265 Ga0496106_0013785 3300048909 Bacteria 5972
266 Ga0496107_0000052 3300048910 Bacteria 62300
267 Ga0496115_0004537 3300048918 Bacteria 10046
268 Ga0496115_0013634 3300048918 Bacteria 6150
269 Ga0496115_0109946 3300048918 Bacteria 2264
270 Ga0496115_0268055 3300048918 Bacteria 1404
271 Ga0496118_0032466 3300048921 Bacteria 4300
272 Ga0496121_0003635 3300048924 Bacteria 21721
273 Ga0496121_0169644 3300048924 Bacteria 1587
274 Ga0496124_0004349 3300048927 Bacteria 16593
275 Ga0496125_0054068 3300048928 Bacteria 3285
276 Ga0496126_0000510 3300048929 Bacteria 76092
277 Ga0501032_0032651 3300049569 Bacteria 3567
278 Ga0501033_0001722 3300049570 Bacteria 19143
279 Ga0501034_0006743 3300049571 Bacteria 12294
280 Ga0501037_0009347 3300049573 Bacteria 7195
281 Ga0501047_0071998 3300049581 Bacteria 3327
282 Ga0501047_0140686 3300049581 Bacteria 2292
283 Ga0501257_003891 3300049686 Bacteria 3235
284 Ga0501044_0000776 3300049823 Bacteria 38704
285 Ga0501044_0013748 3300049823 Bacteria 8747
286 nmdc:mga00v17_778_c1 3300050491 Bacteria 17338
287 nmdc:mga06z11_20571_c1 3300050494 Bacteria 3052
288 nmdc:mga07m45_138480_c1 3300050496 Bacteria 1409
289 nmdc:mga0sz30_5080_c1 3300050516 Bacteria 4812
290 Ga0500635_0000085 3300053080 Bacteria 59878
291 Ga0500578_0239051 3300053086 Bacteria 1098
292 Ga0500643_000966 3300053087 Bacteria 17836
293 Ga0500643_004755 3300053087 Bacteria 6024
294 Ga0500643_032287 3300053087 Bacteria 1591
295 Ga0500647_0153457 3300053091 Bacteria 1073
296 Ga0500566_0031948 3300053094 Bacteria 3069
297 Ga0500566_0247474 3300053094 Bacteria 869
298 Ga0500641_0116723 3300053096 Bacteria 1149
299 Ga0500556_0018410 3300053104 Bacteria 2203
300 Ga0500562_000465 3300053108 Bacteria 9816
301 Ga0500562_005704 3300053108 Bacteria 3134
302 Ga0500595_012127 3300053119 Bacteria 3342
303 Ga0500595_025544 3300053119 Bacteria 2045
304 Ga0500608_000033 3300053122 Bacteria 64026
305 Ga0500608_002700 3300053122 Bacteria 6512
306 Ga0500614_010188 3300053123 Bacteria 2016
307 Ga0500618_000609 3300053125 Bacteria 21870
308 Ga0500642_0151918 3300053130 Bacteria 1087
309 Ga0500658_0018416 3300053134 Bacteria 2617
310 Ga0500559_0027327 3300053136 Bacteria 2435
311 Ga0500559_0029970 3300053136 Bacteria 2331
312 Ga0500559_0045741 3300053136 Bacteria 1917
313 Ga0500559_0094949 3300053136 Bacteria 1369
314 Ga0500590_087939 3300053148 Bacteria 1514
315 Ga0500590_089992 3300053148 Bacteria 1491
316 Ga0500616_0005561 3300053153 Bacteria 8527
317 Ga0500616_0028742 3300053153 Bacteria 3062
318 Ga0500619_002685 3300053154 Bacteria 3477
319 Ga0500622_0042111 3300053156 Bacteria 2374
320 Ga0500622_0047990 3300053156 Bacteria 2204
321 Ga0500639_111521 3300053163 Bacteria 1330
322 Ga0500636_0007545 3300053177 Bacteria 6288
323 Ga0500636_0132657 3300053177 Bacteria 1386
324 Ga0500576_011664 3300053725 Bacteria 3906
325 Ga0500645_001041 3300053730 Bacteria 15475
326 Ga0500645_006968 3300053730 Bacteria 3980
327 Ga0500609_003615 3300053731 Bacteria 2157
328 Ga0500596_004830 3300053735 Bacteria 2435

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025931 Ga0207644_10113896 Ga0207644_101138963 197
2 3300035171 Ga0373946_0099716 Ga0373946_0099716_332_1033 205
3 3300005339 Ga0070660_100500339 Ga0070660_1005003391 211
4 3300025919 Ga0207657_10415029 Ga0207657_104150291 211
5 3300025933 Ga0207706_10189041 Ga0207706_101890412 211
6 3300028800 Ga0265338_10003962 Ga0265338_1000396214 212
7 3300037418 Ga0395900_0000004 Ga0395900_0000004_480040_480783 213
8 3300037466 Ga0395898_0063954 Ga0395898_0063954_648_1391 213
9 3300037471 Ga0395905_0010223 Ga0395905_0010223_4747_5490 213
10 3300038443 Ga0395901_0000005 Ga0395901_0000005_84784_85527 213
11 3300005530 Ga0070679_100392672 Ga0070679_1003926721 215
12 3300021388 Ga0213875_10049527 Ga0213875_100495272 215
13 3300031251 Ga0265327_10014510 Ga0265327_100145104 215
14 3300037853 Ga0436364_0279533 Ga0436364_0279533_701_1411 215
15 3300053087 Ga0500643_000966 Ga0500643_000966_4212_4934 215
16 3300053136 Ga0500559_0094949 Ga0500559_0094949_340_1080 215
17 3300005366 Ga0070659_100026952 Ga0070659_1000269524 216
18 3300005539 Ga0068853_100044140 Ga0068853_1000441403 216
19 3300013100 Ga0157373_10003448 Ga0157373_1000344811 216
20 3300013100 Ga0157373_10009597 Ga0157373_100095978 216
21 3300025932 Ga0207690_10010905 Ga0207690_100109054 216
22 3300026041 Ga0207639_10296058 Ga0207639_102960582 216
23 3300046684 Ga0495669_0001002 Ga0495669_0001002_10285_11031 217
24 3300047445 Ga0495677_0100815 Ga0495677_0100815_194_940 217
25 3300028800 Ga0265338_10220422 Ga0265338_102204222 218
26 3300039438 Ga0436360_0280152 Ga0436360_0280152_57_833 218
27 3300046519 Ga0495632_0044839 Ga0495632_0044839_18_731 218
28 3300046616 Ga0495668_0002546 Ga0495668_0002546_8473_9264 218
29 3300053148 Ga0500590_087939 Ga0500590_087939_550_1299 218
30 3300053177 Ga0500636_0007545 Ga0500636_0007545_4153_4884 218
31 iso_pu_bacteria 2643221614 2644088143 218
32 iso_pu_bacteria 2643221661 2644343381 218
33 iso_pu_bacteria 2643221666 2644369142 218
34 3300038443 Ga0395901_0417653 Ga0395901_0417653_291_1052 219
35 3300053136 Ga0500559_0027327 Ga0500559_0027327_671_1402 219
36 iso_pu_bacteria 2928531327 2928535848 219
37 3300005347 Ga0070668_100002109 Ga0070668_10000210916 220
38 3300005367 Ga0070667_100016439 Ga0070667_1000164393 220
39 3300005548 Ga0070665_100005664 Ga0070665_1000056648 220
40 3300005844 Ga0068862_100026473 Ga0068862_1000264732 220
41 3300025261 Ga0209233_1043572 Ga0209233_10435721 220
42 3300025972 Ga0207668_10000003 Ga0207668_1000000389 220
43 3300025986 Ga0207658_10015673 Ga0207658_100156733 220
44 3300028379 Ga0268266_10004796 Ga0268266_100047967 220
45 3300028380 Ga0268265_10017704 Ga0268265_100177042 220
46 3300028381 Ga0268264_10718910 Ga0268264_107189102 220
47 3300031251 Ga0265327_10014129 Ga0265327_100141292 220
48 3300031711 Ga0265314_10045524 Ga0265314_100455243 220
49 3300037312 Ga0395899_0071789 Ga0395899_0071789_716_1492 220
50 3300037312 Ga0395899_0152554 Ga0395899_0152554_839_1594 220
51 3300037418 Ga0395900_0338176 Ga0395900_0338176_663_1439 220
52 3300037466 Ga0395898_0159907 Ga0395898_0159907_420_1196 220
53 3300037466 Ga0395898_0286794 Ga0395898_0286794_29_805 220
54 3300038443 Ga0395901_0535368 Ga0395901_0535368_18_794 220
55 3300038443 Ga0395901_0560064 Ga0395901_0560064_204_980 220
56 3300049823 Ga0501044_0013748 Ga0501044_0013748_7496_8227 220
57 3300053087 Ga0500643_032287 Ga0500643_032287_523_1263 220
58 3300053094 Ga0500566_0247474 Ga0500566_0247474_112_819 220
59 3300005844 Ga0068862_100239559 Ga0068862_1002395592 221
60 3300006881 Ga0068865_100001330 Ga0068865_1000013302 221
61 3300013306 Ga0163162_10157513 Ga0163162_101575132 221
62 3300014325 Ga0163163_10787145 Ga0163163_107871452 221
63 3300025938 Ga0207704_10028575 Ga0207704_100285752 221
64 3300026089 Ga0207648_10672029 Ga0207648_106720292 221
65 3300026095 Ga0207676_10470168 Ga0207676_104701682 221
66 3300046660 Ga0495625_0041806 Ga0495625_0041806_729_1478 221
67 3300046689 Ga0495613_0001082 Ga0495613_0001082_2612_3370 221
68 3300005563 Ga0068855_100081921 Ga0068855_1000819213 222
69 3300009093 Ga0105240_10209797 Ga0105240_102097973 222
70 3300009545 Ga0105237_10563732 Ga0105237_105637322 222
71 3300009551 Ga0105238_10060097 Ga0105238_100600973 222
72 3300010375 Ga0105239_10282477 Ga0105239_102824772 222
73 3300021384 Ga0213876_10082093 Ga0213876_100820931 222
74 3300025949 Ga0207667_10121445 Ga0207667_101214452 222
75 3300028800 Ga0265338_10011829 Ga0265338_100118294 222
76 3300039437 Ga0436365_1165756 Ga0436365_1165756_4237_5010 222
77 3300046507 Ga0495606_0012412 Ga0495606_0012412_2796_3560 222
78 3300048928 Ga0496125_0054068 Ga0496125_0054068_163_912 222
79 3300049571 Ga0501034_0006743 Ga0501034_0006743_5470_6207 222
80 3300049581 Ga0501047_0140686 Ga0501047_0140686_1480_2220 222
81 3300053153 Ga0500616_0028742 Ga0500616_0028742_1686_2435 222
82 3300005347 Ga0070668_100005199 Ga0070668_1000051995 223
83 3300005347 Ga0070668_100048607 Ga0070668_1000486072 223
84 3300005617 Ga0068859_100077003 Ga0068859_1000770032 223
85 3300005719 Ga0068861_100217718 Ga0068861_1002177182 223
86 3300005843 Ga0068860_100000032 Ga0068860_10000003261 223
87 3300005844 Ga0068862_100022900 Ga0068862_1000229004 223
88 3300006028 Ga0070717_10260922 Ga0070717_102609222 223
89 3300006931 Ga0097620_100077002 Ga0097620_1000770025 223
90 3300010375 Ga0105239_10460710 Ga0105239_104607101 223
91 3300021384 Ga0213876_10186769 Ga0213876_101867691 223
92 3300025972 Ga0207668_10134070 Ga0207668_101340702 223
93 3300026118 Ga0207675_100504121 Ga0207675_1005041212 223
94 3300028380 Ga0268265_10005382 Ga0268265_100053826 223
95 3300028381 Ga0268264_10000045 Ga0268264_10000045291 223
96 3300031456 Ga0307513_10009462 Ga0307513_100094622 223
97 3300039437 Ga0436365_0777410 Ga0436365_0777410_36_851 223
98 3300047320 Ga0495672_0109796 Ga0495672_0109796_632_1378 223
99 3300049570 Ga0501033_0001722 Ga0501033_0001722_1835_2575 223
100 3300049573 Ga0501037_0009347 Ga0501037_0009347_720_1460 223
101 3300049686 Ga0501257_003891 Ga0501257_003891_539_1279 223
102 3300049823 Ga0501044_0000776 Ga0501044_0000776_31947_32687 223
103 3300053096 Ga0500641_0116723 Ga0500641_0116723_356_1096 223
104 3300003791 Ga0055530_10000014 Ga0055530_1000001438 224
105 3300003794 Ga0055531_10003345 Ga0055531_100033458 224
106 3300005262 Ga0065165_1000147 Ga0065165_100014734 224
107 3300005262 Ga0065165_1004590 Ga0065165_10045905 224
108 3300005327 Ga0070658_10205783 Ga0070658_102057832 224
109 3300005331 Ga0070670_100000269 Ga0070670_10000026933 224
110 3300005334 Ga0068869_100341439 Ga0068869_1003414392 224
111 3300005335 Ga0070666_10040258 Ga0070666_100402582 224
112 3300005336 Ga0070680_100062577 Ga0070680_1000625771 224
113 3300005339 Ga0070660_100017126 Ga0070660_1000171263 224
114 3300005347 Ga0070668_100001745 Ga0070668_10000174516 224
115 3300005353 Ga0070669_100487458 Ga0070669_1004874582 224
116 3300005355 Ga0070671_100100709 Ga0070671_1001007092 224
117 3300005367 Ga0070667_100000185 Ga0070667_10000018526 224
118 3300005367 Ga0070667_100050412 Ga0070667_1000504124 224
119 3300005367 Ga0070667_100068482 Ga0070667_1000684823 224
120 3300005458 Ga0070681_10011588 Ga0070681_100115883 224
121 3300005530 Ga0070679_100039579 Ga0070679_1000395794 224
122 3300005548 Ga0070665_100002881 Ga0070665_1000028812 224
123 3300005548 Ga0070665_100032816 Ga0070665_1000328163 224
124 3300005563 Ga0068855_100202948 Ga0068855_1002029481 224
125 3300005578 Ga0068854_100366158 Ga0068854_1003661581 224
126 3300005614 Ga0068856_100181496 Ga0068856_1001814962 224
127 3300005617 Ga0068859_100028497 Ga0068859_1000284972 224
128 3300005618 Ga0068864_100000096 Ga0068864_10000009610 224
129 3300005618 Ga0068864_100000292 Ga0068864_10000029220 224
130 3300005718 Ga0068866_10170839 Ga0068866_101708391 224
131 3300005719 Ga0068861_100121487 Ga0068861_1001214872 224
132 3300005841 Ga0068863_100000041 Ga0068863_10000004188 224
133 3300005841 Ga0068863_100000489 Ga0068863_10000048916 224
134 3300005842 Ga0068858_100000494 Ga0068858_10000049430 224
135 3300005842 Ga0068858_100015906 Ga0068858_1000159063 224
136 3300005843 Ga0068860_100000644 Ga0068860_10000064419 224
137 3300005843 Ga0068860_100084562 Ga0068860_1000845622 224
138 3300005844 Ga0068862_100000469 Ga0068862_10000046922 224
139 3300005844 Ga0068862_100019141 Ga0068862_1000191416 224
140 3300006178 Ga0075367_10023541 Ga0075367_100235412 224
141 3300006931 Ga0097620_100028497 Ga0097620_1000284972 224
142 3300006946 Ga0079104_1033669 Ga0079104_10336692 224
143 3300009093 Ga0105240_10002875 Ga0105240_1000287514 224
144 3300009093 Ga0105240_10070018 Ga0105240_100700183 224
145 3300009093 Ga0105240_10082886 Ga0105240_100828864 224
146 3300009177 Ga0105248_10000125 Ga0105248_1000012553 224
147 3300009177 Ga0105248_10003232 Ga0105248_1000323211 224
148 3300009177 Ga0105248_10017919 Ga0105248_100179192 224
149 3300009553 Ga0105249_10000544 Ga0105249_1000054410 224
150 3300013307 Ga0157372_10039055 Ga0157372_100390554 224
151 3300014325 Ga0163163_10768372 Ga0163163_107683721 224
152 3300014326 Ga0157380_10124785 Ga0157380_101247854 224
153 3300014968 Ga0157379_10248046 Ga0157379_102480462 224
154 3300014968 Ga0157379_10464864 Ga0157379_104648641 224
155 3300017792 Ga0163161_10162870 Ga0163161_101628702 224
156 3300017792 Ga0163161_10663931 Ga0163161_106639311 224
157 3300025297 Ga0209758_1001561 Ga0209758_10015618 224
158 3300025298 Ga0209050_1000034 Ga0209050_1000034108 224
159 3300025304 Ga0209257_1000052 Ga0209257_1000052302 224
160 3300025304 Ga0209257_1000100 Ga0209257_1000100167 224
161 3300025304 Ga0209257_1001452 Ga0209257_100145211 224
162 3300025903 Ga0207680_10010260 Ga0207680_100102605 224
163 3300025909 Ga0207705_10228186 Ga0207705_102281862 224
164 3300025912 Ga0207707_10044245 Ga0207707_100442451 224
165 3300025913 Ga0207695_10000722 Ga0207695_1000072258 224
166 3300025913 Ga0207695_10001126 Ga0207695_1000112612 224
167 3300025913 Ga0207695_10022839 Ga0207695_100228393 224
168 3300025913 Ga0207695_10050473 Ga0207695_100504734 224
169 3300025919 Ga0207657_10342464 Ga0207657_103424641 224
170 3300025923 Ga0207681_10143293 Ga0207681_101432931 224
171 3300025925 Ga0207650_10000616 Ga0207650_1000061613 224
172 3300025925 Ga0207650_10188937 Ga0207650_101889372 224
173 3300025941 Ga0207711_10000560 Ga0207711_1000056024 224
174 3300025941 Ga0207711_10005780 Ga0207711_100057802 224
175 3300025941 Ga0207711_10113206 Ga0207711_101132062 224
176 3300025942 Ga0207689_10278816 Ga0207689_102788162 224
177 3300025949 Ga0207667_10994817 Ga0207667_109948171 224
178 3300025961 Ga0207712_10001498 Ga0207712_1000149811 224
179 3300025961 Ga0207712_10100881 Ga0207712_101008812 224
180 3300025961 Ga0207712_10475304 Ga0207712_104753042 224
181 3300025972 Ga0207668_10000290 Ga0207668_1000029016 224
182 3300025972 Ga0207668_10003315 Ga0207668_100033153 224
183 3300025986 Ga0207658_10000696 Ga0207658_1000069626 224
184 3300026035 Ga0207703_10000035 Ga0207703_10000035144 224
185 3300026035 Ga0207703_10009026 Ga0207703_100090268 224
186 3300026088 Ga0207641_10000027 Ga0207641_1000002779 224
187 3300026088 Ga0207641_10000649 Ga0207641_1000064920 224
188 3300026095 Ga0207676_10000093 Ga0207676_1000009317 224
189 3300026095 Ga0207676_10002579 Ga0207676_1000257913 224
190 3300026118 Ga0207675_100038993 Ga0207675_1000389932 224
191 3300028379 Ga0268266_10009164 Ga0268266_1000916410 224
192 3300028380 Ga0268265_10000365 Ga0268265_1000036524 224
193 3300028381 Ga0268264_10000118 Ga0268264_10000118103 224
194 3300028381 Ga0268264_10664776 Ga0268264_106647761 224
195 3300028786 Ga0307517_10020079 Ga0307517_100200796 224
196 3300028786 Ga0307517_10081659 Ga0307517_100816592 224
197 3300030521 Ga0307511_10009968 Ga0307511_100099683 224
198 3300031456 Ga0307513_10007934 Ga0307513_1000793410 224
199 3300033180 Ga0307510_10031833 Ga0307510_100318337 224
200 3300037471 Ga0395905_0408584 Ga0395905_0408584_314_1060 224
201 3300044658 Ga0466972_0187395 Ga0466972_0187395_64_813 224
202 3300044735 Ga0466968_0066398 Ga0466968_0066398_264_1013 224
203 3300046459 Ga0495629_0172780 Ga0495629_0172780_429_1175 224
204 3300046506 Ga0495583_0102542 Ga0495583_0102542_434_1183 224
205 3300046522 Ga0495643_0002591 Ga0495643_0002591_80_826 224
206 3300046538 Ga0495609_0018316 Ga0495609_0018316_949_1695 224
207 3300046542 Ga0495597_0005233 Ga0495597_0005233_3215_3961 224
208 3300046557 Ga0495622_0024131 Ga0495622_0024131_1513_2259 224
209 3300046616 Ga0495668_0093543 Ga0495668_0093543_507_1271 224
210 3300046648 Ga0495611_0015193 Ga0495611_0015193_1818_2567 224
211 3300046648 Ga0495611_0212037 Ga0495611_0212037_46_792 224
212 3300046684 Ga0495669_0005768 Ga0495669_0005768_2486_3352 224
213 3300046684 Ga0495669_0034615 Ga0495669_0034615_104_853 224
214 3300047320 Ga0495672_0022515 Ga0495672_0022515_735_1484 224
215 3300048905 Ga0496102_0539647 Ga0496102_0539647_96_860 224
216 3300048918 Ga0496115_0013634 Ga0496115_0013634_1431_2180 224
217 3300048918 Ga0496115_0268055 Ga0496115_0268055_644_1393 224
218 3300048921 Ga0496118_0032466 Ga0496118_0032466_2115_2879 224
219 3300049569 Ga0501032_0032651 Ga0501032_0032651_2654_3403 224
220 3300050491 nmdc:mga00v17_778_c1 nmdc:mga00v17_778_c1_7361_8104 224
221 3300050494 nmdc:mga06z11_20571_c1 nmdc:mga06z11_20571_c1_90_833 224
222 3300053080 Ga0500635_0000085 Ga0500635_0000085_16260_17006 224
223 3300053086 Ga0500578_0239051 Ga0500578_0239051_145_891 224
224 3300053087 Ga0500643_004755 Ga0500643_004755_738_1481 224
225 3300053091 Ga0500647_0153457 Ga0500647_0153457_153_899 224
226 3300053094 Ga0500566_0031948 Ga0500566_0031948_1587_2333 224
227 3300053104 Ga0500556_0018410 Ga0500556_0018410_137_886 224
228 3300053108 Ga0500562_005704 Ga0500562_005704_1372_2121 224
229 3300053119 Ga0500595_012127 Ga0500595_012127_1929_2675 224
230 3300053119 Ga0500595_025544 Ga0500595_025544_431_1177 224
231 3300053122 Ga0500608_002700 Ga0500608_002700_3401_4147 224
232 3300053130 Ga0500642_0151918 Ga0500642_0151918_25_774 224
233 3300053136 Ga0500559_0045741 Ga0500559_0045741_750_1496 224
234 3300053148 Ga0500590_089992 Ga0500590_089992_241_987 224
235 3300053154 Ga0500619_002685 Ga0500619_002685_2056_2802 224
236 3300053163 Ga0500639_111521 Ga0500639_111521_100_846 224
237 3300053177 Ga0500636_0132657 Ga0500636_0132657_618_1364 224
238 3300053725 Ga0500576_011664 Ga0500576_011664_1564_2310 224
239 3300053730 Ga0500645_001041 Ga0500645_001041_4828_5568 224
240 3300053735 Ga0500596_004830 Ga0500596_004830_361_1107 224
241 iso_pu_bacteria 2643221640 2644227234 224
242 iso_pu_bacteria 2643221642 2644233299 224
243 iso_pu_bacteria 2884960567 2884962132 224
244 3300005336 Ga0070680_100021695 Ga0070680_1000216953 225
245 3300005339 Ga0070660_100143119 Ga0070660_1001431192 225
246 3300005339 Ga0070660_100374802 Ga0070660_1003748022 225
247 3300005347 Ga0070668_100012655 Ga0070668_1000126552 225
248 3300005366 Ga0070659_100000110 Ga0070659_10000011053 225
249 3300005366 Ga0070659_100002546 Ga0070659_1000025467 225
250 3300005458 Ga0070681_10025884 Ga0070681_100258844 225
251 3300005539 Ga0068853_100088384 Ga0068853_1000883842 225
252 3300005548 Ga0070665_100000183 Ga0070665_10000018338 225
253 3300005548 Ga0070665_100191623 Ga0070665_1001916232 225
254 3300005563 Ga0068855_100017537 Ga0068855_1000175372 225
255 3300005617 Ga0068859_100265326 Ga0068859_1002653262 225
256 3300006028 Ga0070717_10099914 Ga0070717_100999142 225
257 3300006931 Ga0097620_100265311 Ga0097620_1002653112 225
258 3300009553 Ga0105249_10385894 Ga0105249_103858941 225
259 3300025909 Ga0207705_10020422 Ga0207705_100204222 225
260 3300025912 Ga0207707_10030922 Ga0207707_100309223 225
261 3300025913 Ga0207695_10307157 Ga0207695_103071572 225
262 3300025917 Ga0207660_10003732 Ga0207660_100037323 225
263 3300025919 Ga0207657_10014066 Ga0207657_100140665 225
264 3300025919 Ga0207657_10066911 Ga0207657_100669113 225
265 3300025921 Ga0207652_10042979 Ga0207652_100429791 225
266 3300025932 Ga0207690_10000370 Ga0207690_100003703 225
267 3300025932 Ga0207690_10005909 Ga0207690_100059096 225
268 3300025949 Ga0207667_10009945 Ga0207667_100099452 225
269 3300025972 Ga0207668_10016945 Ga0207668_100169453 225
270 3300026041 Ga0207639_10084767 Ga0207639_100847671 225
271 3300026041 Ga0207639_10142809 Ga0207639_101428091 225
272 3300028379 Ga0268266_10000062 Ga0268266_10000062168 225
273 3300035083 Ga0373926_0005997 Ga0373926_0005997_2374_3135 225
274 3300035695 Ga0373927_0013837 Ga0373927_0013837_1319_2080 225
275 3300037068 Ga0373925_0000760 Ga0373925_0000760_1297_2058 225
276 3300037418 Ga0395900_0046178 Ga0395900_0046178_1630_2412 225
277 3300037466 Ga0395898_0356719 Ga0395898_0356719_567_1349 225
278 3300037471 Ga0395905_0019738 Ga0395905_0019738_4106_4888 225
279 3300037471 Ga0395905_0024528 Ga0395905_0024528_3287_4054 225
280 3300048918 Ga0496115_0109946 Ga0496115_0109946_165_926 225
281 3300049581 Ga0501047_0071998 Ga0501047_0071998_1156_1935 225
282 3300053108 Ga0500562_000465 Ga0500562_000465_2648_3406 225
283 iso_pu_bacteria 2585428106 2587917279 225
284 iso_pu_bacteria 2849573788 2849575826 225
285 iso_pu_bacteria 2851153111 2851156260 225
286 iso_pu_bacteria 2857504554 2857508249 225
287 3300005327 Ga0070658_10153555 Ga0070658_101535552 226
288 3300025299 Ga0209256_1004814 Ga0209256_10048148 226
289 3300048904 Ga0496101_0037501 Ga0496101_0037501_2515_3240 226
290 3300048909 Ga0496106_0013785 Ga0496106_0013785_111_836 226
291 3300048910 Ga0496107_0000052 Ga0496107_0000052_29601_30326 226
292 3300048924 Ga0496121_0003635 Ga0496121_0003635_3718_4443 226
293 iso_pu_bacteria 2843744320 2843746306 226
294 3300048927 Ga0496124_0004349 Ga0496124_0004349_7683_8468 227
295 3300050516 nmdc:mga0sz30_5080_c1 nmdc:mga0sz30_5080_c1_1700_2485 227
296 iso_pu_bacteria 2643221545 2643749962 227
297 iso_pu_bacteria 2643221584 2643927746 227
298 iso_pu_bacteria 2643221691 2644510884 227
299 iso_pu_bacteria 2818991454 2819645006 227
300 3300037418 Ga0395900_0209516 Ga0395900_0209516_1131_1901 228
301 3300046539 Ga0495621_0104937 Ga0495621_0104937_122_877 228
302 3300047446 Ga0495679_010356 Ga0495679_010356_1399_2136 228
303 3300048918 Ga0496115_0004537 Ga0496115_0004537_5832_6578 228
304 3300053125 Ga0500618_000609 Ga0500618_000609_20667_21404 228
305 3300003791 Ga0055530_10006902 Ga0055530_100069022 229
306 3300003794 Ga0055531_10001024 Ga0055531_100010245 229
307 3300006353 Ga0075370_10123873 Ga0075370_101238732 229
308 3300025292 Ga0209676_1000233 Ga0209676_100023358 229
309 3300025298 Ga0209050_1000624 Ga0209050_10006249 229
310 3300025304 Ga0209257_1000265 Ga0209257_100026558 229
311 3300046538 Ga0495609_0214972 Ga0495609_0214972_30_779 229
312 3300046616 Ga0495668_0147654 Ga0495668_0147654_71_820 229
313 3300048924 Ga0496121_0169644 Ga0496121_0169644_368_1120 229
314 3300050496 nmdc:mga07m45_138480_c1 nmdc:mga07m45_138480_c1_511_1260 229
315 3300053122 Ga0500608_000033 Ga0500608_000033_47370_48128 229
316 3300053136 Ga0500559_0029970 Ga0500559_0029970_134_892 229
317 3300053156 Ga0500622_0042111 Ga0500622_0042111_1606_2355 229
318 3300053156 Ga0500622_0047990 Ga0500622_0047990_97_855 229
319 3300046515 Ga0495620_0075336 Ga0495620_0075336_150_893 230
320 3300046538 Ga0495609_0050172 Ga0495609_0050172_216_953 230
321 3300047472 Ga0495686_0101060 Ga0495686_0101060_558_1364 230
322 3300048929 Ga0496126_0000510 Ga0496126_0000510_21439_22206 230
323 3300003215 JGI25153J46596_10033000 JGI25153J46596_100330002 231
324 3300003794 Ga0055531_10001689 Ga0055531_1000168913 231
325 3300025297 Ga0209758_1009192 Ga0209758_10091927 231
326 3300025304 Ga0209257_1000074 Ga0209257_1000074225 231
327 3300046460 Ga0495638_0000700 Ga0495638_0000700_19957_20706 231
328 3300046492 Ga0495585_0108797 Ga0495585_0108797_520_1272 231
329 3300046501 Ga0495607_0027358 Ga0495607_0027358_209_961 231
330 3300046512 Ga0495610_0000073 Ga0495610_0000073_62648_63397 231
331 3300046513 Ga0495616_0000861 Ga0495616_0000861_799_1551 231
332 3300046519 Ga0495632_0002764 Ga0495632_0002764_11876_12628 231
333 3300046523 Ga0495644_0035814 Ga0495644_0035814_142_891 231
334 3300046525 Ga0495663_0077025 Ga0495663_0077025_35_784 231
335 3300046530 Ga0495654_0000018 Ga0495654_0000018_231240_231989 231
336 3300046616 Ga0495668_0011247 Ga0495668_0011247_3066_3818 231
337 3300046660 Ga0495625_0009055 Ga0495625_0009055_707_1456 231
338 3300046660 Ga0495625_0013909 Ga0495625_0013909_5062_5811 231
339 3300047320 Ga0495672_0000409 Ga0495672_0000409_22214_22963 231
340 3300053123 Ga0500614_010188 Ga0500614_010188_279_1043 231
341 3300053134 Ga0500658_0018416 Ga0500658_0018416_1406_2155 231
342 3300053153 Ga0500616_0005561 Ga0500616_0005561_5720_6469 231
343 3300053730 Ga0500645_006968 Ga0500645_006968_2590_3339 231
344 3300053731 Ga0500609_003615 Ga0500609_003615_1044_1796 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04002

RadC

RadC-like JAB domain

167

287

0.98

PF20582

UPF0758_N

UPF0758 N-terminal

69

144

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x2i-assembly1.cif.gz_B crystal structure of archaeal xpf/mus81 homolog, hef from pyrococcus furiosus, helix-hairpin-helix domain 0.8733 51 92
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.8717 110 231
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.8523 110 231
3c1y-assembly1.cif.gz_A structure of bacterial dna damage sensor protein with co-purified and co-crystallized ligand 0.8067 34 89
2owo-assembly1.cif.gz_A last stop on the road to repair: structure of e.coli dna ligase bound to nicked dna-adenylate 0.7794 49 89
ID Description Score Start End Superfamily
af_P25531_100_221_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9716 110 229 3.40.140.10
af_Q47685_35_158_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9712 110 231 3.40.140.10
af_P25531_100_221_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9484 110 229 3.40.140.10
af_Q47685_35_158_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9483 110 231 3.40.140.10
af_P31337_89_213_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9056 108 229 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A1H9LTV6-F1-model_v4 DNA repair protein radc 0.9854 109 231 GO:0006508
GO:0008237
GO:0046872
AF-A0A7Y4F5Y9-F1-model_v4 deleted 0.9847 159 231
AF-A0A3E1BNQ5-F1-model_v4 deleted 0.9837 135 231
AF-A0A3Z0R6Y6-F1-model_v4 deleted 0.9783 114 231
AF-A0A7C1VV34-F1-model_v4 DNA repair protein RadC 0.9765 129 231 GO:0006508
GO:0008237
GO:0046872

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pLDDT pTM Quality
80.83 0.63 Medium
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Predicted Structure (AlphaFold2)

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