F416293

General Info

Members Datasets Scaffolds Average Seq Length
345 176 690 360

Family's Representative Sequence

Representative Sequence 3300005577|Ga0068857_100045227|Ga0068857_1000452273
Length 426
Sequence LLHRTRGARKSAFERDSSRIRPALHRNRPHTPVNGRATAARIGPRGDDDPRRAHDARAGFGRHLARIRPMPSITDPHQRLARIGWRAQALPEGTDPAAIARVVAQHRAGYQLHDGNDMFNAQPAARFLKRDLDPTERPAVGDFVLVAAGSPPTIERVLPRRTELKRGAAGESHQRQLIAANVDAVFVLSGLDHDFNPARIERYLLLIQGSGATPVLVLTKADRTEAVDAVVDDLRRRVPGVDVHAVNAKAADSVAPLLAYLGPGHTAVLVGSSGAGKSTLTNTLLGESRQATGAVREHDSRGRHTTTHRALILLPSGGCLIDTPGMRELKLTGEEQIDQGQFADIDELAQSCRFGDCAHANEPGCAVRAALADGRLDPDRWRNYLKLRDELAATADTLEAQMRRKGEAKVLTKALGKRLNEKYGRH

Samples

Sample ID Description Type Environment
1 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
61 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
107 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
111 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
112 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
113 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
114 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
117 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
118 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
119 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
120 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
121 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
129 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
130 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
131 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
132 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
133 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
134 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
135 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
136 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
137 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
138 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
139 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
154 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
155 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
160 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
161 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
162 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
163 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
164 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
168 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
169 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
170 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
171 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
174 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
175 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
176 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.84
Metatranscriptomes 0
Isolates 1.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.74
Nodule 0
Rhizoplane 1.74
Rhizosphere 92.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068857_100045227 3300005577 Bacteria 3905
2 JGI24736J21556_1005773 3300001904 Bacteria 2091
3 Ga0070658_10127365 3300005327 Bacteria 2120
4 Ga0070676_10176772 3300005328 Bacteria 1385
5 Ga0070670_100063219 3300005331 Bacteria 3177
6 Ga0068869_100023789 3300005334 Bacteria 4237
7 Ga0070666_10004068 3300005335 Bacteria 8879
8 Ga0070666_10011519 3300005335 Bacteria 5552
9 Ga0070666_10038212 3300005335 Bacteria 3194
10 Ga0068868_100127451 3300005338 Bacteria 2080
11 Ga0068868_100174609 3300005338 Bacteria 1780
12 Ga0070660_100020215 3300005339 Bacteria 4890
13 Ga0070689_100114337 3300005340 Bacteria 2150
14 Ga0070661_100056105 3300005344 Bacteria 2885
15 Ga0070668_100013362 3300005347 Bacteria 6127
16 Ga0070669_100005246 3300005353 Bacteria 9355
17 Ga0070675_100031977 3300005354 Bacteria 4255
18 Ga0070671_100046802 3300005355 Bacteria 3597
19 Ga0070671_100120884 3300005355 Bacteria 2204
20 Ga0070674_100063252 3300005356 Bacteria 2589
21 Ga0070667_100002318 3300005367 Bacteria 16680
22 Ga0070667_100029341 3300005367 Bacteria 4582
23 Ga0070667_100075297 3300005367 Bacteria 2881
24 Ga0070667_100157288 3300005367 Bacteria 2000
25 Ga0070709_10022476 3300005434 Bacteria 3690
26 Ga0070711_100017641 3300005439 Bacteria 4548
27 Ga0070663_100001924 3300005455 Bacteria 11602
28 Ga0070663_100009168 3300005455 Bacteria 6118
29 Ga0070663_100110570 3300005455 Bacteria 2064
30 Ga0070662_100048332 3300005457 Bacteria 3064
31 Ga0068867_100015989 3300005459 Bacteria 5327
32 Ga0068867_100062564 3300005459 Bacteria 2765
33 Ga0070685_10000728 3300005466 Bacteria 17921
34 Ga0070679_100202032 3300005530 Bacteria 1953
35 Ga0068853_100002409 3300005539 Bacteria 13973
36 Ga0068853_100002777 3300005539 Bacteria 13235
37 Ga0068853_100006095 3300005539 Bacteria 9546
38 Ga0068853_100015728 3300005539 Bacteria 6214
39 Ga0068853_100083113 3300005539 Bacteria 2805
40 Ga0068853_100112236 3300005539 Bacteria 2423
41 Ga0070672_100008813 3300005543 Bacteria 6926
42 Ga0070672_100011478 3300005543 Bacteria 6179
43 Ga0070693_100006346 3300005547 Bacteria 5733
44 Ga0070665_100000069 3300005548 Bacteria 202384
45 Ga0070665_100000712 3300005548 Bacteria 44327
46 Ga0070665_100015586 3300005548 Bacteria 7637
47 Ga0070665_100024124 3300005548 Bacteria 6126
48 Ga0070665_100084458 3300005548 Bacteria 3180
49 Ga0070665_100087781 3300005548 Bacteria 3116
50 Ga0070665_100113313 3300005548 Bacteria 2714
51 Ga0068855_100003514 3300005563 Bacteria 19175
52 Ga0068855_100044463 3300005563 Bacteria 5255
53 Ga0068855_100094583 3300005563 Bacteria 3445
54 Ga0068857_100039856 3300005577 Bacteria 4163
55 Ga0068857_100169506 3300005577 Bacteria 1984
56 Ga0068854_100002034 3300005578 Bacteria 12392
57 Ga0068854_100026340 3300005578 Bacteria 3996
58 Ga0068854_100073330 3300005578 Bacteria 2509
59 Ga0068854_100124715 3300005578 Bacteria 1960
60 Ga0068856_100210323 3300005614 Bacteria 1960
61 Ga0068852_100012443 3300005616 Bacteria 6462
62 Ga0068852_100025305 3300005616 Bacteria 4808
63 Ga0068852_100036597 3300005616 Bacteria 4109
64 Ga0068852_100036938 3300005616 Bacteria 4093
65 Ga0068852_100047371 3300005616 Bacteria 3667
66 Ga0068859_100001685 3300005617 Bacteria 22488
67 Ga0068864_100186419 3300005618 Bacteria 1899
68 Ga0068866_10116700 3300005718 Bacteria 1498
69 Ga0068851_10001588 3300005834 Bacteria 9978
70 Ga0068851_10029258 3300005834 Bacteria 2727
71 Ga0068863_100003051 3300005841 Bacteria 16552
72 Ga0068863_100067221 3300005841 Bacteria 3390
73 Ga0068858_100136158 3300005842 Bacteria 2305
74 Ga0068860_100003583 3300005843 Bacteria 15961
75 Ga0068860_100083128 3300005843 Bacteria 3045
76 Ga0068860_100135212 3300005843 Bacteria 2367
77 Ga0068862_100000405 3300005844 Bacteria 46553
78 Ga0068862_100028513 3300005844 Bacteria 4702
79 Ga0068862_100281598 3300005844 Bacteria 1524
80 Ga0081540_1002296 3300005983 Bacteria 15697
81 Ga0097621_100039314 3300006237 Bacteria 3799
82 Ga0068871_100034719 3300006358 Bacteria 4004
83 Ga0068871_100037000 3300006358 Bacteria 3890
84 Ga0068871_100271888 3300006358 Bacteria 1480
85 Ga0068865_100021705 3300006881 Bacteria 4179
86 Ga0068865_100060827 3300006881 Bacteria 2645
87 Ga0068865_100069010 3300006881 Bacteria 2500
88 Ga0097620_100001685 3300006931 Bacteria 22488
89 Ga0105240_10015802 3300009093 Bacteria 10242
90 Ga0105240_10024387 3300009093 Bacteria 7973
91 Ga0105240_10089019 3300009093 Bacteria 3776
92 Ga0105240_10119625 3300009093 Bacteria 3173
93 Ga0105240_10179063 3300009093 Bacteria 2504
94 Ga0105241_10017465 3300009174 Bacteria 5276
95 Ga0105241_10054518 3300009174 Bacteria 3060
96 Ga0105241_10064481 3300009174 Bacteria 2828
97 Ga0105241_10159419 3300009174 Bacteria 1853
98 Ga0105242_10002501 3300009176 Bacteria 14410
99 Ga0105242_10131341 3300009176 Bacteria 2162
100 Ga0105248_10000133 3300009177 Bacteria 86577
101 Ga0105237_10003036 3300009545 Bacteria 20251
102 Ga0105237_10010556 3300009545 Bacteria 9815
103 Ga0105237_10031069 3300009545 Bacteria 5418
104 Ga0105237_10096795 3300009545 Bacteria 2942
105 Ga0105237_10277689 3300009545 Bacteria 1678
106 Ga0105238_10001169 3300009551 Bacteria 26421
107 Ga0105238_10002400 3300009551 Bacteria 18791
108 Ga0105238_10005569 3300009551 Bacteria 12441
109 Ga0105238_10024817 3300009551 Bacteria 6110
110 Ga0105238_10063096 3300009551 Bacteria 3705
111 Ga0105238_10142422 3300009551 Bacteria 2374
112 Ga0105249_10000687 3300009553 Bacteria 30763
113 Ga0105249_10007999 3300009553 Bacteria 9216
114 Ga0105239_10003633 3300010375 Bacteria 18857
115 Ga0105239_10013780 3300010375 Bacteria 8973
116 Ga0105239_10089845 3300010375 Bacteria 3388
117 Ga0105239_10150443 3300010375 Bacteria 2598
118 Ga0105246_10053885 3300011119 Bacteria 2770
119 Ga0157369_10001448 3300013105 Bacteria 29115
120 Ga0157369_10004870 3300013105 Bacteria 15753
121 Ga0157374_10026828 3300013296 Bacteria 5187
122 Ga0157374_10144524 3300013296 Bacteria 2310
123 Ga0157378_10000274 3300013297 Bacteria 50288
124 Ga0157378_10298633 3300013297 Bacteria 1558
125 Ga0163162_10000004 3300013306 Bacteria 505593
126 Ga0163162_10003367 3300013306 Bacteria 15297
127 Ga0163162_10020176 3300013306 Bacteria 6545
128 Ga0163162_10075637 3300013306 Bacteria 3428
129 Ga0163162_10284611 3300013306 Bacteria 1785
130 Ga0157372_10001569 3300013307 Bacteria 24888
131 Ga0157372_10004661 3300013307 Bacteria 14569
132 Ga0157375_10003234 3300013308 Bacteria 14139
133 Ga0157375_10053507 3300013308 Bacteria 3972
134 Ga0163163_10000041 3300014325 Bacteria 142066
135 Ga0163163_10045368 3300014325 Bacteria 4314
136 Ga0157376_10102180 3300014969 Bacteria 2507
137 Ga0209051_1011050 3300025303 Bacteria 4495
138 Ga0207656_10000389 3300025321 Bacteria 14777
139 Ga0207656_10032148 3300025321 Bacteria 2178
140 Ga0207680_10000357 3300025903 Bacteria 21852
141 Ga0207680_10007365 3300025903 Bacteria 5358
142 Ga0207680_10041516 3300025903 Bacteria 2684
143 Ga0207680_10073733 3300025903 Bacteria 2123
144 Ga0207647_10000175 3300025904 Bacteria 51622
145 Ga0207699_10044925 3300025906 Bacteria 2575
146 Ga0207699_10179918 3300025906 Bacteria 1421
147 Ga0207705_10250910 3300025909 Bacteria 1349
148 Ga0207654_10012002 3300025911 Bacteria 4431
149 Ga0207654_10050735 3300025911 Bacteria 2386
150 Ga0207654_10064390 3300025911 Bacteria 2155
151 Ga0207654_10098876 3300025911 Bacteria 1794
152 Ga0207695_10000418 3300025913 Bacteria 94702
153 Ga0207695_10023655 3300025913 Bacteria 6933
154 Ga0207695_10071456 3300025913 Bacteria 3545
155 Ga0207671_10002990 3300025914 Bacteria 17324
156 Ga0207671_10004606 3300025914 Bacteria 13092
157 Ga0207671_10006953 3300025914 Bacteria 9956
158 Ga0207671_10024510 3300025914 Bacteria 4534
159 Ga0207671_10037777 3300025914 Bacteria 3580
160 Ga0207671_10042633 3300025914 Bacteria 3358
161 Ga0207657_10003152 3300025919 Bacteria 17636
162 Ga0207649_10002125 3300025920 Bacteria 11233
163 Ga0207649_10235125 3300025920 Bacteria 1312
164 Ga0207652_10175016 3300025921 Bacteria 1927
165 Ga0207681_10021126 3300025923 Bacteria 4133
166 Ga0207694_10000595 3300025924 Bacteria 32650
167 Ga0207694_10001173 3300025924 Bacteria 22705
168 Ga0207694_10010344 3300025924 Bacteria 7034
169 Ga0207694_10017097 3300025924 Bacteria 5479
170 Ga0207694_10063692 3300025924 Bacteria 2872
171 Ga0207659_10021106 3300025926 Bacteria 4317
172 Ga0207644_10112115 3300025931 Bacteria 2064
173 Ga0207690_10119399 3300025932 Bacteria 1912
174 Ga0207706_10006977 3300025933 Bacteria 10442
175 Ga0207706_10043117 3300025933 Bacteria 3998
176 Ga0207686_10141816 3300025934 Bacteria 1662
177 Ga0207670_10086620 3300025936 Bacteria 2205
178 Ga0207670_10157364 3300025936 Bacteria 1692
179 Ga0207691_10016816 3300025940 Bacteria 6943
180 Ga0207691_10023241 3300025940 Bacteria 5836
181 Ga0207691_10027937 3300025940 Bacteria 5285
182 Ga0207711_10000197 3300025941 Bacteria 64508
183 Ga0207711_10044005 3300025941 Bacteria 3809
184 Ga0207689_10013095 3300025942 Bacteria 7081
185 Ga0207689_10186178 3300025942 Bacteria 1712
186 Ga0207679_10049265 3300025945 Bacteria 3073
187 Ga0207667_10003841 3300025949 Bacteria 18466
188 Ga0207667_10089703 3300025949 Bacteria 3177
189 Ga0207667_10137445 3300025949 Bacteria 2516
190 Ga0207712_10000230 3300025961 Bacteria 55280
191 Ga0207712_10001880 3300025961 Bacteria 13797
192 Ga0207712_10082449 3300025961 Bacteria 2344
193 Ga0207668_10046827 3300025972 Bacteria 2957
194 Ga0207640_10003676 3300025981 Bacteria 8271
195 Ga0207640_10239913 3300025981 Bacteria 1400
196 Ga0207658_10000104 3300025986 Bacteria 92659
197 Ga0207658_10008654 3300025986 Bacteria 6919
198 Ga0207658_10011540 3300025986 Bacteria 6014
199 Ga0207658_10075518 3300025986 Bacteria 2564
200 Ga0207677_10094297 3300026023 Bacteria 2184
201 Ga0207703_10064086 3300026035 Bacteria 3015
202 Ga0207703_10110507 3300026035 Bacteria 2345
203 Ga0207639_10000873 3300026041 Bacteria 20462
204 Ga0207639_10007494 3300026041 Bacteria 7445
205 Ga0207639_10008364 3300026041 Bacteria 7093
206 Ga0207639_10027970 3300026041 Bacteria 4111
207 Ga0207639_10040556 3300026041 Bacteria 3476
208 Ga0207639_10055124 3300026041 Bacteria 3041
209 Ga0207639_10177797 3300026041 Bacteria 1808
210 Ga0207639_10272285 3300026041 Bacteria 1486
211 Ga0207678_10026104 3300026067 Bacteria 5097
212 Ga0207678_10034959 3300026067 Bacteria 4375
213 Ga0207678_10044620 3300026067 Bacteria 3834
214 Ga0207678_10140348 3300026067 Bacteria 2062
215 Ga0207678_10196996 3300026067 Bacteria 1722
216 Ga0207702_10004401 3300026078 Bacteria 12545
217 Ga0207702_10132433 3300026078 Bacteria 2245
218 Ga0207702_10149743 3300026078 Bacteria 2121
219 Ga0207641_10011491 3300026088 Bacteria 7269
220 Ga0207648_10011564 3300026089 Bacteria 8309
221 Ga0207648_10019824 3300026089 Bacteria 6069
222 Ga0207648_10031510 3300026089 Bacteria 4688
223 Ga0207676_10102782 3300026095 Bacteria 2373
224 Ga0207674_10086575 3300026116 Bacteria 3128
225 Ga0207674_10166265 3300026116 Bacteria 2160
226 Ga0207683_10030814 3300026121 Bacteria 4651
227 Ga0207698_10018628 3300026142 Bacteria 4737
228 Ga0207698_10129921 3300026142 Bacteria 2150
229 Ga0207698_10152069 3300026142 Bacteria 2010
230 Ga0268266_10000001 3300028379 Bacteria 4040580
231 Ga0268266_10000008 3300028379 Bacteria 1161875
232 Ga0268266_10025704 3300028379 Bacteria 5010
233 Ga0268266_10067175 3300028379 Bacteria 3103
234 Ga0268266_10347903 3300028379 Bacteria 1392
235 Ga0268265_10000399 3300028380 Bacteria 46538
236 Ga0268265_10126719 3300028380 Bacteria 2114
237 Ga0268264_10009697 3300028381 Bacteria 7974
238 Ga0268264_10059283 3300028381 Bacteria 3207
239 Ga0268264_10146776 3300028381 Bacteria 2110
240 Ga0307508_10060389 3300031616 Bacteria 3352
241 Ga0316575_10007023 3300031665 Bacteria 4074
242 Ga0307516_10062120 3300031730 Bacteria 3621
243 Ga0307405_10263259 3300031731 Bacteria 1289
244 Ga0307413_10013924 3300031824 Bacteria 4067
245 Ga0307416_100064831 3300032002 Bacteria 2999
246 Ga0307507_10032504 3300033179 Bacteria 5444
247 Ga0373923_0032376 3300035111 Bacteria 2112
248 Ga0373957_0009364 3300035120 Bacteria 3204
249 Ga0373937_0016080 3300036401 Bacteria 6637
250 Ga0451802_1822171 3300041460 Bacteria 1847
251 Ga0451807_2760651 3300041486 Bacteria 1928
252 Ga0451837_0527199 3300041494 Bacteria 2522
253 Ga0451843_0244254 3300041509 Bacteria 1487
254 Ga0451853_3884382 3300041512 Bacteria 2477
255 Ga0451577_0101885 3300042876 Bacteria 2565
256 Ga0466972_0001630 3300044658 Bacteria 10978
257 Ga0466970_0002059 3300044765 Bacteria 9727
258 Ga0466959_0003859 3300045049 Bacteria 9945
259 Ga0495639_0013940 3300046475 Bacteria 3477
260 Ga0495594_0203467 3300046499 Bacteria 1129
261 Ga0495645_0027352 3300046543 Bacteria 4144
262 Ga0495658_0003355 3300046683 Bacteria 7935
263 Ga0495686_0019310 3300047472 Bacteria 4555
264 Ga0495686_0104828 3300047472 Bacteria 1702
265 Ga0496104_0000005 3300048907 Bacteria 620360
266 Ga0496105_0000016 3300048908 Bacteria 212909
267 Ga0496107_0092952 3300048910 Bacteria 2206
268 Ga0496114_0073529 3300048917 Bacteria 2877
269 Ga0496117_0020001 3300048920 Bacteria 5474
270 Ga0496118_0028656 3300048921 Bacteria 4684
271 Ga0496118_0057911 3300048921 Bacteria 2900
272 Ga0496121_0028282 3300048924 Bacteria 5223
273 Ga0496122_0000136 3300048925 Bacteria 170671
274 Ga0496123_0001133 3300048926 Bacteria 39810
275 Ga0501031_0003469 3300049568 Bacteria 10121
276 Ga0501031_0022526 3300049568 Bacteria 4104
277 Ga0501031_0037816 3300049568 Bacteria 3150
278 Ga0501032_0002260 3300049569 Bacteria 15144
279 Ga0501032_0076991 3300049569 Bacteria 2220
280 Ga0501032_0138611 3300049569 Bacteria 1602
281 Ga0501033_0000650 3300049570 Bacteria 32204
282 Ga0501033_0004276 3300049570 Bacteria 11477
283 Ga0501033_0043261 3300049570 Bacteria 3354
284 Ga0501034_0002864 3300049571 Bacteria 20079
285 Ga0501034_0003509 3300049571 Bacteria 17807
286 Ga0501034_0099274 3300049571 Bacteria 2906
287 Ga0501036_0002697 3300049572 Bacteria 14012
288 Ga0501036_0022818 3300049572 Bacteria 5269
289 Ga0501037_0000554 3300049573 Bacteria 29729
290 Ga0501037_0012342 3300049573 Bacteria 6289
291 Ga0501038_0004855 3300049574 Bacteria 12492
292 Ga0501038_0007073 3300049574 Bacteria 10363
293 Ga0501038_0037890 3300049574 Bacteria 4225
294 Ga0501039_0024315 3300049575 Bacteria 4651
295 Ga0501039_0045789 3300049575 Bacteria 3379
296 Ga0501039_0279786 3300049575 Bacteria 1311
297 Ga0501040_0004378 3300049576 Bacteria 9182
298 Ga0501042_0206579 3300049578 Bacteria 1416
299 Ga0501043_0003804 3300049579 Bacteria 12411
300 Ga0501043_0077340 3300049579 Bacteria 2614
301 Ga0501043_0093953 3300049579 Bacteria 2357
302 Ga0501046_0010095 3300049580 Bacteria 8128
303 Ga0501046_0022369 3300049580 Bacteria 5207
304 Ga0501047_0001854 3300049581 Bacteria 20362
305 Ga0501047_0072399 3300049581 Bacteria 3317
306 Ga0501048_0028843 3300049582 Bacteria 4028
307 Ga0501048_0120160 3300049582 Bacteria 1856
308 Ga0501067_0005340 3300049583 Bacteria 7137
309 Ga0501067_0059450 3300049583 Bacteria 2116
310 Ga0501069_0013169 3300049585 Bacteria 4406
311 Ga0501070_0029957 3300049586 Bacteria 4559
312 Ga0501071_0020714 3300049587 Bacteria 4573
313 Ga0501072_0011187 3300049588 Bacteria 6849
314 Ga0501073_0002087 3300049589 Bacteria 14958
315 Ga0501073_0015333 3300049589 Bacteria 5557
316 Ga0501073_0083364 3300049589 Bacteria 2224
317 Ga0501074_0017443 3300049590 Bacteria 5209
318 Ga0501074_0178329 3300049590 Bacteria 1516
319 Ga0501079_0198660 3300049741 Bacteria 1566
320 Ga0501079_0218676 3300049741 Bacteria 1488
321 Ga0501080_0011527 3300049742 Bacteria 8095
322 Ga0501080_0014299 3300049742 Bacteria 7308
323 Ga0501080_0086855 3300049742 Bacteria 2906
324 Ga0501080_0097465 3300049742 Bacteria 2730
325 Ga0501080_0282997 3300049742 Bacteria 1507
326 Ga0501081_0237890 3300049743 Bacteria 1327
327 Ga0501083_0010420 3300049744 Bacteria 6542
328 Ga0501275_001767 3300049772 Bacteria 2059
329 Ga0501035_0004572 3300049822 Bacteria 13122
330 Ga0501035_0009104 3300049822 Bacteria 9232
331 Ga0501035_0074565 3300049822 Bacteria 3001
332 Ga0501035_0184528 3300049822 Bacteria 1796
333 Ga0501044_0023477 3300049823 Bacteria 6559
334 Ga0501044_0060879 3300049823 Bacteria 3863
335 Ga0501045_0145415 3300049824 Bacteria 1763
336 Ga0500610_0000766 3300053079 Bacteria 10097
337 Ga0500643_005374 3300053087 Bacteria 5535
338 Ga0500651_0000561 3300053093 Bacteria 18911
339 Ga0500651_0004031 3300053093 Bacteria 8156
340 Ga0500597_000274 3300053120 Bacteria 10380
341 Ga0501082_0025022 3300060353 Bacteria 5142
342 2525558343 2524614729 Bacteria 3091755
343 2630650331 2627854209 Bacteria 3093011
344 2643914017 2643221581 Bacteria 3893603
345 2923516479 2923516293 Bacteria 3716336
346 Ga0068857_100045227
347 JGI24736J21556_1005773
348 Ga0070658_10127365
349 Ga0070676_10176772
350 Ga0070670_100063219
351 Ga0068869_100023789
352 Ga0070666_10004068
353 Ga0070666_10011519
354 Ga0070666_10038212
355 Ga0068868_100127451
356 Ga0068868_100174609
357 Ga0070660_100020215
358 Ga0070689_100114337
359 Ga0070661_100056105
360 Ga0070668_100013362
361 Ga0070669_100005246
362 Ga0070675_100031977
363 Ga0070671_100046802
364 Ga0070671_100120884
365 Ga0070674_100063252
366 Ga0070667_100002318
367 Ga0070667_100029341
368 Ga0070667_100075297
369 Ga0070667_100157288
370 Ga0070709_10022476
371 Ga0070711_100017641
372 Ga0070663_100001924
373 Ga0070663_100009168
374 Ga0070663_100110570
375 Ga0070662_100048332
376 Ga0068867_100015989
377 Ga0068867_100062564
378 Ga0070685_10000728
379 Ga0070679_100202032
380 Ga0068853_100002409
381 Ga0068853_100002777
382 Ga0068853_100006095
383 Ga0068853_100015728
384 Ga0068853_100083113
385 Ga0068853_100112236
386 Ga0070672_100008813
387 Ga0070672_100011478
388 Ga0070693_100006346
389 Ga0070665_100000069
390 Ga0070665_100000712
391 Ga0070665_100015586
392 Ga0070665_100024124
393 Ga0070665_100084458
394 Ga0070665_100087781
395 Ga0070665_100113313
396 Ga0068855_100003514
397 Ga0068855_100044463
398 Ga0068855_100094583
399 Ga0068857_100039856
400 Ga0068857_100169506
401 Ga0068854_100002034
402 Ga0068854_100026340
403 Ga0068854_100073330
404 Ga0068854_100124715
405 Ga0068856_100210323
406 Ga0068852_100012443
407 Ga0068852_100025305
408 Ga0068852_100036597
409 Ga0068852_100036938
410 Ga0068852_100047371
411 Ga0068859_100001685
412 Ga0068864_100186419
413 Ga0068866_10116700
414 Ga0068851_10001588
415 Ga0068851_10029258
416 Ga0068863_100003051
417 Ga0068863_100067221
418 Ga0068858_100136158
419 Ga0068860_100003583
420 Ga0068860_100083128
421 Ga0068860_100135212
422 Ga0068862_100000405
423 Ga0068862_100028513
424 Ga0068862_100281598
425 Ga0081540_1002296
426 Ga0097621_100039314
427 Ga0068871_100034719
428 Ga0068871_100037000
429 Ga0068871_100271888
430 Ga0068865_100021705
431 Ga0068865_100060827
432 Ga0068865_100069010
433 Ga0097620_100001685
434 Ga0105240_10015802
435 Ga0105240_10024387
436 Ga0105240_10089019
437 Ga0105240_10119625
438 Ga0105240_10179063
439 Ga0105241_10017465
440 Ga0105241_10054518
441 Ga0105241_10064481
442 Ga0105241_10159419
443 Ga0105242_10002501
444 Ga0105242_10131341
445 Ga0105248_10000133
446 Ga0105237_10003036
447 Ga0105237_10010556
448 Ga0105237_10031069
449 Ga0105237_10096795
450 Ga0105237_10277689
451 Ga0105238_10001169
452 Ga0105238_10002400
453 Ga0105238_10005569
454 Ga0105238_10024817
455 Ga0105238_10063096
456 Ga0105238_10142422
457 Ga0105249_10000687
458 Ga0105249_10007999
459 Ga0105239_10003633
460 Ga0105239_10013780
461 Ga0105239_10089845
462 Ga0105239_10150443
463 Ga0105246_10053885
464 Ga0157369_10001448
465 Ga0157369_10004870
466 Ga0157374_10026828
467 Ga0157374_10144524
468 Ga0157378_10000274
469 Ga0157378_10298633
470 Ga0163162_10000004
471 Ga0163162_10003367
472 Ga0163162_10020176
473 Ga0163162_10075637
474 Ga0163162_10284611
475 Ga0157372_10001569
476 Ga0157372_10004661
477 Ga0157375_10003234
478 Ga0157375_10053507
479 Ga0163163_10000041
480 Ga0163163_10045368
481 Ga0157376_10102180
482 Ga0209051_1011050
483 Ga0207656_10000389
484 Ga0207656_10032148
485 Ga0207680_10000357
486 Ga0207680_10007365
487 Ga0207680_10041516
488 Ga0207680_10073733
489 Ga0207647_10000175
490 Ga0207699_10044925
491 Ga0207699_10179918
492 Ga0207705_10250910
493 Ga0207654_10012002
494 Ga0207654_10050735
495 Ga0207654_10064390
496 Ga0207654_10098876
497 Ga0207695_10000418
498 Ga0207695_10023655
499 Ga0207695_10071456
500 Ga0207671_10002990
501 Ga0207671_10004606
502 Ga0207671_10006953
503 Ga0207671_10024510
504 Ga0207671_10037777
505 Ga0207671_10042633
506 Ga0207657_10003152
507 Ga0207649_10002125
508 Ga0207649_10235125
509 Ga0207652_10175016
510 Ga0207681_10021126
511 Ga0207694_10000595
512 Ga0207694_10001173
513 Ga0207694_10010344
514 Ga0207694_10017097
515 Ga0207694_10063692
516 Ga0207659_10021106
517 Ga0207644_10112115
518 Ga0207690_10119399
519 Ga0207706_10006977
520 Ga0207706_10043117
521 Ga0207686_10141816
522 Ga0207670_10086620
523 Ga0207670_10157364
524 Ga0207691_10016816
525 Ga0207691_10023241
526 Ga0207691_10027937
527 Ga0207711_10000197
528 Ga0207711_10044005
529 Ga0207689_10013095
530 Ga0207689_10186178
531 Ga0207679_10049265
532 Ga0207667_10003841
533 Ga0207667_10089703
534 Ga0207667_10137445
535 Ga0207712_10000230
536 Ga0207712_10001880
537 Ga0207712_10082449
538 Ga0207668_10046827
539 Ga0207640_10003676
540 Ga0207640_10239913
541 Ga0207658_10000104
542 Ga0207658_10008654
543 Ga0207658_10011540
544 Ga0207658_10075518
545 Ga0207677_10094297
546 Ga0207703_10064086
547 Ga0207703_10110507
548 Ga0207639_10000873
549 Ga0207639_10007494
550 Ga0207639_10008364
551 Ga0207639_10027970
552 Ga0207639_10040556
553 Ga0207639_10055124
554 Ga0207639_10177797
555 Ga0207639_10272285
556 Ga0207678_10026104
557 Ga0207678_10034959
558 Ga0207678_10044620
559 Ga0207678_10140348
560 Ga0207678_10196996
561 Ga0207702_10004401
562 Ga0207702_10132433
563 Ga0207702_10149743
564 Ga0207641_10011491
565 Ga0207648_10011564
566 Ga0207648_10019824
567 Ga0207648_10031510
568 Ga0207676_10102782
569 Ga0207674_10086575
570 Ga0207674_10166265
571 Ga0207683_10030814
572 Ga0207698_10018628
573 Ga0207698_10129921
574 Ga0207698_10152069
575 Ga0268266_10000001
576 Ga0268266_10000008
577 Ga0268266_10025704
578 Ga0268266_10067175
579 Ga0268266_10347903
580 Ga0268265_10000399
581 Ga0268265_10126719
582 Ga0268264_10009697
583 Ga0268264_10059283
584 Ga0268264_10146776
585 Ga0307508_10060389
586 Ga0316575_10007023
587 Ga0307516_10062120
588 Ga0307405_10263259
589 Ga0307413_10013924
590 Ga0307416_100064831
591 Ga0307507_10032504
592 Ga0373923_0032376
593 Ga0373957_0009364
594 Ga0373937_0016080
595 Ga0451802_1822171
596 Ga0451807_2760651
597 Ga0451837_0527199
598 Ga0451843_0244254
599 Ga0451853_3884382
600 Ga0451577_0101885
601 Ga0466972_0001630
602 Ga0466970_0002059
603 Ga0466959_0003859
604 Ga0495639_0013940
605 Ga0495594_0203467
606 Ga0495645_0027352
607 Ga0495658_0003355
608 Ga0495686_0019310
609 Ga0495686_0104828
610 Ga0496104_0000005
611 Ga0496105_0000016
612 Ga0496107_0092952
613 Ga0496114_0073529
614 Ga0496117_0020001
615 Ga0496118_0028656
616 Ga0496118_0057911
617 Ga0496121_0028282
618 Ga0496122_0000136
619 Ga0496123_0001133
620 Ga0501031_0003469
621 Ga0501031_0022526
622 Ga0501031_0037816
623 Ga0501032_0002260
624 Ga0501032_0076991
625 Ga0501032_0138611
626 Ga0501033_0000650
627 Ga0501033_0004276
628 Ga0501033_0043261
629 Ga0501034_0002864
630 Ga0501034_0003509
631 Ga0501034_0099274
632 Ga0501036_0002697
633 Ga0501036_0022818
634 Ga0501037_0000554
635 Ga0501037_0012342
636 Ga0501038_0004855
637 Ga0501038_0007073
638 Ga0501038_0037890
639 Ga0501039_0024315
640 Ga0501039_0045789
641 Ga0501039_0279786
642 Ga0501040_0004378
643 Ga0501042_0206579
644 Ga0501043_0003804
645 Ga0501043_0077340
646 Ga0501043_0093953
647 Ga0501046_0010095
648 Ga0501046_0022369
649 Ga0501047_0001854
650 Ga0501047_0072399
651 Ga0501048_0028843
652 Ga0501048_0120160
653 Ga0501067_0005340
654 Ga0501067_0059450
655 Ga0501069_0013169
656 Ga0501070_0029957
657 Ga0501071_0020714
658 Ga0501072_0011187
659 Ga0501073_0002087
660 Ga0501073_0015333
661 Ga0501073_0083364
662 Ga0501074_0017443
663 Ga0501074_0178329
664 Ga0501079_0198660
665 Ga0501079_0218676
666 Ga0501080_0011527
667 Ga0501080_0014299
668 Ga0501080_0086855
669 Ga0501080_0097465
670 Ga0501080_0282997
671 Ga0501081_0237890
672 Ga0501083_0010420
673 Ga0501275_001767
674 Ga0501035_0004572
675 Ga0501035_0009104
676 Ga0501035_0074565
677 Ga0501035_0184528
678 Ga0501044_0023477
679 Ga0501044_0060879
680 Ga0501045_0145415
681 Ga0500610_0000766
682 Ga0500643_005374
683 Ga0500651_0000561
684 Ga0500651_0004031
685 Ga0500597_000274
686 Ga0501082_0025022
687 2525558343
688 2630650331
689 2643914017
690 2923516479

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03193

RsgA_GTPase

RsgA GTPase

157

332

0.94

PF00005

ABC_tran

ABC transporter

255

362

0.79

PF01926

MMR_HSR1

50S ribosome-binding GTPase

266

355

0.61

Structural Annotation

Top 5 Hits

ID Description Score Start End
5no4-assembly1.cif.gz_Z rsga-gdpnp bound to the 30s ribosomal subunit (rsga assembly intermediate with us3) 0.7687 30 328
6h4d-assembly1.cif.gz_A crystal structure of rsga from pseudomonas aeruginosa 0.7601 30 325
2ykr-assembly1.cif.gz_W 30s ribosomal subunit with rsga bound in the presence of gmppnp 0.7601 30 327
2ykr-assembly1.cif.gz_W 30s ribosomal subunit with rsga bound in the presence of gmppnp 0.7456 30 327
3gei-assembly1.cif.gz_A-2 crystal structure of mnme from chlorobium tepidum in complex with gcp 0.7408 116 196
ID Description Score Start End Superfamily
af_C0H4D6_57_283_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8328 114 171 3.40.50.300
af_P39286_103_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8169 93 267 3.40.50.300
af_P39286_103_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8126 93 267 3.40.50.300
2rcnA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8063 93 267 3.40.50.300
1t9hA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8032 114 267 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7G8PZD1-F1-model_v4 Small ribosomal subunit biogenesis GTPase RsgA (EC 3.6.1.-) 0.9249 6 343 GO:0003924
GO:0005525
GO:0005737
GO:0019843
GO:0042274
GO:0046872
AF-A0A1G7W6C1-F1-model_v4 Small ribosomal subunit biogenesis GTPase RsgA (EC 3.6.1.-) 0.9214 6 342 GO:0003924
GO:0005525
GO:0005737
GO:0019843
GO:0042274
GO:0046872
AF-A0A1G3FDM9-F1-model_v4 Ribosome small subunit-dependent GTPase A 0.9075 6 338 GO:0003924
GO:0005525
GO:0019843
GO:0042254
AF-I4VIZ1-F1-model_v4 GTPase RsgA 0.9056 6 332 GO:0003924
GO:0005525
GO:0019843
GO:0042254
AF-A0A350CRC7-F1-model_v4 Ribosome small subunit-dependent GTPase A 0.9011 10 220 GO:0003924
GO:0005525

Map