F416574

General Info

Members Datasets Scaffolds Average Seq Length
345 305 118 607

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_000348|Ga0500618_000348_862_2940
Length 680
Sequence VPNWLDREKGANSPIFNRFNSRARRAVRLSAQLDCAACGKVLNDLMAHSAIPIAQNPLAEPPVPSGGVGDARALQRSWVIFAAVAALVFSTALASLEAEGRTAANLKIALLHAVLERPRALPFLLSQDRDVQDALKDDTQESRHALDQKLEGIIAGTNAAVIYVVGRDGVAISASNWREATSFVGNDYSFRDYFSRGMREGKAEHFALGSVSNRPGLYISHRVGPADHPIGVVVVKMEFDQLEGDWSETRRPSYVTDDHGVVLITSIPSWRFFTTTRLSTESLAAIRQSLQFGGAPLTRLPMLEAENLGDDAAIVRVSLPGAEPADYLRITKPVATTSWNFSYLQPIEVPLSSAVREAQLGASLLLAAATAVAAMWLWRRQVAQLTIAREQWAXXELERRVVERTRDLSLARDRLQSEISDHRATETQLQIVQHDLVQANRLAILGQVAAGVAHEINQPVATIRAYADNSMVFLERQQPQKIAENLSLIAGLTERIGVITEDLKALARRGRTAAEPVDLAQAIEGARVLLKSRFTGRIEHLIVTPLPLGSALPAADAGNIPLGPPTGIYVSANRLRLEQVFINLFQNALEAVGDSPDGRVTVSVALDGDSVSITVADNGPGISPDILGAMFTPFNSSKEKGLGLGLVISKDIVTDYGGRIEVASDTNGTRFTVHLARADA

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2509276033 Rhizobium leguminosarum bv. trifolii WSM2012 Isolate Nodule
3 2510065019 Rhizobium leguminosarum bv. trifolii WSM1689 Isolate Nodule
4 2510461069 Rhizobium sp. PDO1-076 Isolate Rhizosphere
5 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
6 2510917028 Rhizobium sp. CF122 Isolate Rhizosphere
7 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
8 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
9 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
10 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
11 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
12 2513237103 Rhizobium leguminosarum bv. viciae VF39 Isolate Nodule
13 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
14 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
15 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
16 2513237159 Rhizobium giardinii bv. giardinii H152 Isolate Nodule
17 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
18 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
19 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
20 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
21 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
22 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
23 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
24 2516653085 Rhizobium leguminosarum bv. phaseoli 4292 Isolate Nodule
25 2517093000 Rhizobium leguminosarum bv. trifolii SRDI943 Isolate Nodule
26 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
27 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
28 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
29 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
30 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
31 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
32 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
33 2582581866 Rhizobium sp. CF097 Isolate Rhizosphere
34 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
35 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
36 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
37 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
38 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
39 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
40 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
41 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
42 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
43 2615840624 Rhizobium aethiopicum HBR26 Isolate Nodule
44 2643221558 Rhizobium sp. Root149 Isolate Unclassified
45 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
46 2643221719 Rhizobium sp. Root274 Isolate Unclassified
47 2718217882 Rhizobium sp. N741 Isolate Nodule
48 2718217927 Rhizobium sp. N324 Isolate Nodule
49 2718217997 Rhizobium phaseoli sv. phaseoli R723 Isolate Nodule
50 2718218009 Rhizobium sp. N561 Isolate Nodule
51 2718218199 Rhizobium phaseoli sv. phaseoli N261 Isolate Nodule
52 2718218232 Rhizobium phaseoli sv. phaseoli N161 Isolate Nodule
53 2718218233 Rhizobium phaseoli sv. phaseoli R744 Isolate Nodule
54 2718218235 Rhizobium phaseoli sv. phaseoli R620 Isolate Nodule
55 2718218269 Rhizobium phaseoli sv. phaseoli N671 Isolate Nodule
56 2718218363 Rhizobium sp. N113 Isolate Nodule
57 2718218365 Rhizobium sp. N731 Isolate Nodule
58 2718218366 Rhizobium sp. N621 Isolate Nodule
59 2718218423 Rhizobium sp. N941 Isolate Nodule
60 2721755514 Rhizobium sp. N6212 Isolate Nodule
61 2721755556 Rhizobium phaseoli sv. phaseoli N931 Isolate Nodule
62 2721755684 Rhizobium phaseoli sv. phaseoli N841 Isolate Nodule
63 2721755685 Rhizobium phaseoli sv. phaseoli R611 Isolate Nodule
64 2721755809 Rhizobium sp. N541 Isolate Nodule
65 2721755810 Rhizobium sp. N871 Isolate Nodule
66 2721755819 Rhizobium phaseoli sv. phaseoli N771 Isolate Nodule
67 2721755822 Rhizobium phaseoli sv. phaseoli R650 Isolate Nodule
68 2721755823 Rhizobium phaseoli sv. phaseoli R630 Isolate Nodule
69 2724679232 Rhizobium leguminosarum Vaf12 Isolate Unclassified
70 2728369352 Rhizobium phaseoli sv. phaseoli N831 Isolate Nodule
71 2728369365 Rhizobium sp. N1341 Isolate Nodule
72 2728369397 Rhizobium sp. N1314 Isolate Nodule
73 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
74 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
75 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
76 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
77 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
78 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
79 2791355256 Rhizobium sp. M10 Isolate Nodule
80 2791355259 Rhizobium hidalgonense FH14 Isolate Nodule
81 2791355260 Rhizobium sp. L9 Isolate Nodule
82 2791355261 Rhizobium sp. J15 Isolate Nodule
83 2791355262 Rhizobium sp. M1 Isolate Nodule
84 2791355263 Rhizobium chutanense C5 Isolate Nodule
85 2791355264 Rhizobium sp. S9 Isolate Nodule
86 2791355265 Rhizobium sp. H4 Isolate Nodule
87 2791355266 Rhizobium sp. L43 Isolate Nodule
88 2791355267 Rhizobium sp. L18 Isolate Nodule
89 2802429605 Rhizobium sophoriradicis L101 Isolate Nodule
90 2802429606 Rhizobium sophoriradicis JJW1 Isolate Nodule
91 2802429633 Rhizobium anhuiense J3 Isolate Nodule
92 2802429634 Rhizobium anhuiense S10 Isolate Nodule
93 2802429635 Rhizobium anhuiense Y27 Isolate Nodule
94 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
95 2802429637 Rhizobium anhuiense C15 Isolate Nodule
96 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
97 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
98 2838016132 Rhizobium phaseoli SEMIA 4071 Isolate Nodule
99 2838022645 Rhizobium aethiopicum SEMIA 4074 Isolate Nodule
100 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
101 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
102 2838048938 Rhizobium pisi 27/80 Isolate Nodule
103 2838061910 Rhizobium phaseoli L15 Isolate Nodule
104 2838068647 Rhizobium esperanzae VC28 Isolate Nodule
105 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
106 2838668709 Rhizobium sophoriradicis SEMIA 403 Isolate Nodule
107 2838680041 Rhizobium leguminosarum SEMIA 415 Isolate Nodule
108 2838686498 Rhizobium leguminosarum SEMIA 416 Isolate Nodule
109 2838694306 Rhizobium leguminosarum SEMIA 421 Isolate Nodule
110 2838701080 Rhizobium aethiopicum SEMIA 428 Isolate Nodule
111 2838707686 Rhizobium leguminosarum SEMIA 430 Isolate Nodule
112 2838729681 Rhizobium leguminosarum SEMIA 445 Isolate Nodule
113 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
114 2838742623 Rhizobium leguminosarum SEMIA 449 Isolate Nodule
115 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
116 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
117 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
118 2841851746 Rhizobium leguminosarum SEMIA 498 Isolate Nodule
119 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
120 2842077413 Rhizobium leguminosarum SEMIA 422 Isolate Nodule
121 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
122 2842118031 Rhizobium esperanzae SEMIA 420 Isolate Nodule
123 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
124 2842146304 Rhizobium sophoriradicis SEMIA 454 Isolate Nodule
125 2842156927 Rhizobium leguminosarum SEMIA 459 Isolate Nodule
126 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
127 2842180545 Rhizobium leguminosarum SEMIA 463 Isolate Nodule
128 2842192696 Rhizobium esperanzae SEMIA 468 Isolate Nodule
129 2842198810 Rhizobium aethiopicum SEMIA 470 Isolate Nodule
130 2842205361 Rhizobium etli SEMIA 471 Isolate Nodule
131 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
132 2842229732 Rhizobium leguminosarum SEMIA 481 Isolate Nodule
133 2842237096 Rhizobium leguminosarum SEMIA 482 Isolate Nodule
134 2842243621 Rhizobium leguminosarum SEMIA 483 Isolate Nodule
135 2842250916 Rhizobium etli SEMIA 484 Isolate Nodule
136 2842257432 Rhizobium leguminosarum SEMIA 485 Isolate Nodule
137 2842264693 Rhizobium phaseoli SEMIA 487 Isolate Nodule
138 2842271015 Rhizobium leguminosarum SEMIA 488 Isolate Nodule
139 2842278818 Rhizobium etli SEMIA 489 Isolate Nodule
140 2842285085 Rhizobium lentis SEMIA 490 Isolate Nodule
141 2842291075 Rhizobium leguminosarum SEMIA 491 Isolate Nodule
142 2842304105 Rhizobium leguminosarum SEMIA 499 Isolate Nodule
143 2842311132 Rhizobium phaseoli SEMIA 4002 Isolate Nodule
144 2842317721 Rhizobium etli SEMIA 4004 Isolate Nodule
145 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
146 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
147 2842370503 Rhizobium leguminosarum SEMIA 4022 Isolate Nodule
148 2842377471 Rhizobium leguminosarum SEMIA 4024 Isolate Nodule
149 2842384541 Rhizobium leguminosarum SEMIA 4025 Isolate Nodule
150 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
151 2842402390 Rhizobium lentis SEMIA 4033 Isolate Nodule
152 2842409023 Rhizobium lentis SEMIA 4034 Isolate Nodule
153 2842415677 Rhizobium lentis SEMIA 4036 Isolate Nodule
154 2842422224 Rhizobium esperanzae SEMIA 4042 Isolate Nodule
155 2842428310 Rhizobium phaseoli SEMIA 4050 Isolate Nodule
156 2842434925 Rhizobium esperanzae SEMIA 4051 Isolate Nodule
157 2842441272 Rhizobium esperanzae SEMIA 4053 Isolate Nodule
158 2842447887 Rhizobium esperanzae SEMIA 4055 Isolate Nodule
159 2842462802 Rhizobium phaseoli SEMIA 4057 Isolate Nodule
160 2842469257 Rhizobium phaseoli SEMIA 4058 Isolate Nodule
161 2842489311 Rhizobium sophoriradicis SEMIA 4061 Isolate Nodule
162 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
163 2842521101 Rhizobium giardinii SEMIA 4084 Isolate Nodule
164 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
165 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
166 2844454524 Rhizobium leguminosarum bv. viciae BIHB 1217 Isolate Nodule
167 2854916844 Neorhizobium huautlense DSM 21817 Isolate Unclassified
168 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
169 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
170 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
171 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
172 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
173 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
174 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
175 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
176 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
177 2933016740 Rhizobium sp. SEMIA 4085 Isolate Nodule
178 2933570622 Rhizobium leguminosarum SEMIA 409 Isolate Nodule
179 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
180 2933599457 Rhizobium phaseoli M3 Isolate Nodule
181 2935894831 Rhizobium leguminosarum SEMIA 419 Isolate Nodule
182 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
183 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
184 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
185 2936381700 Rhizobium chutanense C16 Isolate Unclassified
186 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
187 2977240413 Brevundimonas vesicularis SORGH_AS 431 Isolate Unclassified
188 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
189 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
190 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
191 2996887358 Rhizobium sp. R711 Isolate Nodule
192 2996893221 Rhizobium sp. R635 Isolate Nodule
193 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
194 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
195 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
196 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
197 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
198 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
199 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
200 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
201 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
202 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
203 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
204 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
205 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
206 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
207 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
208 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
209 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
210 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
211 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
212 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
213 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
214 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
215 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
216 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
217 3300009766 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico white nodule Metagenome Nodule
218 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
219 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
220 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
221 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
222 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
223 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
224 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
225 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
226 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
227 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
228 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
229 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
230 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
231 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
232 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
233 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
234 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
235 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
236 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
237 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
238 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
239 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
240 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
241 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
242 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
243 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
244 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
245 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
246 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
247 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
248 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
249 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
250 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
251 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
252 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
253 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
254 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
255 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
256 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
257 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
258 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
259 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
260 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
261 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
262 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
263 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
264 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
265 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
266 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
267 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
268 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
269 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
270 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
271 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
272 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
273 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
274 8005258706 Rhizobium sp. R693 Isolate Nodule
275 8005275841 Rhizobium sp. N4311 Isolate Nodule
276 8005282627 Rhizobium phaseoli NC1 Isolate Nodule
277 8005289223 Rhizobium bangladeshense 1002 Isolate Nodule
278 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
279 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
280 8005321885 Rhizobium sp. R72 Isolate Nodule
281 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
282 8005382845 Rhizobium sp. R634 Isolate Nodule
283 8005395548 Rhizobium sp. R339 Isolate Nodule
284 8005430974 Rhizobium phaseoli Y20 Isolate Nodule
285 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
286 8005497431 Rhizobium phaseoli CCGM8 Isolate Unclassified
287 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
288 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
289 8005563573 Rhizobium sp. WYCCWR 11152 Isolate Nodule
290 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
291 8005619151 Rhizobium phaseoli CCGM2 Isolate Unclassified
292 8005626139 Rhizobium phaseoli Y18 Isolate Nodule
293 8005668836 Rhizobium phaseoli CCGM9 Isolate Unclassified
294 8005688590 Rhizobium bangladeshense 1024 Isolate Nodule
295 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
296 8018127388 Rhizobium aegyptiacum 950 Isolate Nodule
297 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere
298 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
299 8018176218 Rhizobium sp. N122 Isolate Nodule
300 8023680758 Rhizobium leguminosarum SARCC-132 Isolate Nodule
301 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
302 8024501048 Rhizobium sp. H4 Isolate Nodule
303 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
304 8056382006 Rhizobium croatiense 13T Isolate Nodule
305 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 34.2
Metatranscriptomes 0
Isolates 65.8

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.46
Nodule 51.01
Rhizoplane 2.03
Rhizosphere 12.46
Stem 0
Stem Tuber 0
Unclassified 22.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000015 3300002704 Bacteria 178839
2 JGI25156J39149_1000007 3300002705 Bacteria 252108
3 JGI25154J39366_1000051 3300002738 Bacteria 123608
4 JGI25158J39367_1000140 3300002739 Bacteria 16957
5 JGI25157J39369_1000012 3300002741 Bacteria 205167
6 JGI25151J46595_10002279 3300003187 Bacteria 11766
7 JGI25151J46595_10014611 3300003187 Bacteria 3491
8 JGI25153J46596_10007882 3300003215 Bacteria 5169
9 rootH2_10012531 3300003320 Bacteria 19289
10 rootL2_10008207 3300003322 Bacteria 2866
11 rootL2_10008491 3300003322 Bacteria 40034
12 rootH1_10258411 3300003323 Bacteria 2507
13 JGI25160J50197_1009180 3300003354 Bacteria 3692
14 JGI25161J50226_1000050 3300003374 Bacteria 110628
15 Ga0055526_1003915 3300003771 Bacteria 9194
16 Ga0055528_1002764 3300003790 Bacteria 9194
17 Ga0055540_1001271 3300003792 Bacteria 15348
18 Ga0055543_1000023 3300004625 Bacteria 140513
19 Ga0070665_100039851 3300005548 Bacteria 4723
20 Ga0075369_10007822 3300006186 Bacteria 4090
21 Ga0079104_1000044 3300006946 Bacteria 185367
22 Ga0105251_10015996 3300009011 Bacteria 4074
23 Ga0105248_10080544 3300009177 Bacteria 3660
24 Ga0123341_1000028 3300009765 Bacteria 69145
25 Ga0123342_1017256 3300009766 Bacteria 6046
26 Ga0123342_1024310 3300009766 Bacteria 3807
27 Ga0105239_10032497 3300010375 Bacteria 5733
28 Ga0209435_100006 3300025206 Bacteria 542459
29 Ga0209436_100031 3300025208 Bacteria 82827
30 Ga0209646_1000015 3300025246 Bacteria 542459
31 Ga0209026_1000046 3300025250 Bacteria 262031
32 Ga0209759_1000005 3300025256 Bacteria 542459
33 Ga0209129_1000016 3300025258 Bacteria 485491
34 Ga0209129_1006865 3300025258 Bacteria 3548
35 Ga0209673_1000005 3300025273 Bacteria 692788
36 Ga0209673_1000025 3300025273 Bacteria 404572
37 Ga0209673_1002289 3300025273 Bacteria 13677
38 Ga0209673_1004169 3300025273 Bacteria 7904
39 Ga0209673_1005838 3300025273 Bacteria 6099
40 Ga0209130_1000031 3300025284 Bacteria 322932
41 Ga0209025_1000121 3300025294 Bacteria 208700
42 Ga0209025_1000126 3300025294 Bacteria 200866
43 Ga0209025_1003782 3300025294 Bacteria 13852
44 Ga0209025_1014746 3300025294 Bacteria 4776
45 Ga0209564_1000577 3300025295 Bacteria 58129
46 Ga0209564_1004070 3300025295 Bacteria 9219
47 Ga0209564_1008230 3300025295 Bacteria 5199
48 Ga0209758_1000658 3300025297 Bacteria 51835
49 Ga0209050_1003269 3300025298 Bacteria 12175
50 Ga0209256_1000924 3300025299 Bacteria 35882
51 Ga0209256_1001150 3300025299 Bacteria 30009
52 Ga0209256_1014066 3300025299 Bacteria 2913
53 Ga0207426_1000042 3300025302 Bacteria 433289
54 Ga0207426_1000894 3300025302 Bacteria 30172
55 Ga0209051_1000400 3300025303 Bacteria 60342
56 Ga0209051_1023409 3300025303 Bacteria 2568
57 Ga0207664_10015723 3300025929 Bacteria 5502
58 Ga0209281_1000129 3300027111 Bacteria 194490
59 Ga0307515_10002178 3300028794 Bacteria 43027
60 Ga0307515_10010024 3300028794 Bacteria 18237
61 Ga0307515_10058463 3300028794 Bacteria 5552
62 Ga0307513_10005733 3300031456 Bacteria 16340
63 Ga0395905_0001410 3300037471 Bacteria 29058
64 Ga0439465_0004205 3300041413 Bacteria 4682
65 Ga0451839_1027583 3300041496 Bacteria 3108
66 Ga0451847_0367105 3300041503 Bacteria 5180
67 Ga0451849_0058017 3300041505 Bacteria 3299
68 Ga0495617_016362 3300046452 Bacteria 2508
69 Ga0495583_0035276 3300046506 Bacteria 2388
70 Ga0495606_0005830 3300046507 Bacteria 11619
71 Ga0495606_0029470 3300046507 Bacteria 3853
72 Ga0495610_0002969 3300046512 Bacteria 13681
73 Ga0495620_0012331 3300046515 Bacteria 4423
74 Ga0495654_0000757 3300046530 Bacteria 25005
75 Ga0495609_0020042 3300046538 Bacteria 3091
76 Ga0495668_0025300 3300046616 Bacteria 3374
77 Ga0495625_0014691 3300046660 Bacteria 6237
78 Ga0495625_0040552 3300046660 Bacteria 3394
79 Ga0495661_0042432 3300046665 Bacteria 2804
80 Ga0495649_0016288 3300046694 Bacteria 4214
81 Ga0495686_0048104 3300047472 Bacteria 2690
82 Ga0496106_0000288 3300048909 Bacteria 35636
83 Ga0496110_0111124 3300048913 Bacteria 2463
84 Ga0496111_0000161 3300048914 Bacteria 30179
85 Ga0496116_0021157 3300048919 Bacteria 4913
86 Ga0496117_0001252 3300048920 Bacteria 37812
87 Ga0496117_0002262 3300048920 Bacteria 24865
88 Ga0496118_0001744 3300048921 Bacteria 31587
89 Ga0496118_0010764 3300048921 Bacteria 9016
90 Ga0496118_0090312 3300048921 Bacteria 2111
91 Ga0496121_0000009 3300048924 Bacteria 836971
92 Ga0496121_0008563 3300048924 Bacteria 11984
93 Ga0496121_0023891 3300048924 Bacteria 5864
94 Ga0496121_0043401 3300048924 Bacteria 3894
95 Ga0496122_0000106 3300048925 Bacteria 193672
96 Ga0496122_0000778 3300048925 Bacteria 61337
97 Ga0496122_0021890 3300048925 Bacteria 5702
98 Ga0496122_0030361 3300048925 Bacteria 4529
99 Ga0496123_0000018 3300048926 Bacteria 404553
100 Ga0496123_0000022 3300048926 Bacteria 361832
101 Ga0496123_0001323 3300048926 Bacteria 34986
102 Ga0496123_0013430 3300048926 Bacteria 6877
103 Ga0496123_0028019 3300048926 Bacteria 4180
104 Ga0496124_0001082 3300048927 Bacteria 43057
105 Ga0496124_0017079 3300048927 Bacteria 6861
106 Ga0496124_0030500 3300048927 Bacteria 4785
107 Ga0496124_0046286 3300048927 Bacteria 3727
108 Ga0496125_0000161 3300048928 Bacteria 150707
109 Ga0496126_0000207 3300048929 Bacteria 131816
110 Ga0496126_0095565 3300048929 Bacteria 2606
111 Ga0501043_0015393 3300049579 Bacteria 5990
112 Ga0500618_000285 3300053125 Bacteria 38522
113 Ga0500618_000348 3300053125 Bacteria 32595
114 Ga0500658_0003763 3300053134 Bacteria 5713
115 Ga0500568_0005189 3300053139 Bacteria 6790
116 Ga0500622_0000290 3300053156 Bacteria 51286
117 Ga0500622_0000559 3300053156 Bacteria 34086
118 Ga0500633_0000631 3300053160 Bacteria 5835

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048920 Ga0496117_0001252 Ga0496117_0001252_982_2616 512
2 3300048924 Ga0496121_0000009 Ga0496121_0000009_198197_200041 525
3 3300048926 Ga0496123_0001323 Ga0496123_0001323_21625_23388 526
4 iso_pu_bacteria 2928972540 2928974741 526
5 3300048920 Ga0496117_0002262 Ga0496117_0002262_18679_20460 539
6 3300048921 Ga0496118_0001744 Ga0496118_0001744_18169_19950 539
7 3300003187 JGI25151J46595_10014611 JGI25151J46595_100146112 544
8 3300025294 Ga0209025_1000121 Ga0209025_1000121201 544
9 3300048928 Ga0496125_0000161 Ga0496125_0000161_10030_11871 544
10 3300046507 Ga0495606_0029470 Ga0495606_0029470_167_2005 545
11 iso_pu_bacteria 2977240413 2977242219 547
12 3300025294 Ga0209025_1003782 Ga0209025_10037828 549
13 3300046660 Ga0495625_0014691 Ga0495625_0014691_720_2534 553
14 3300006946 Ga0079104_1000044 Ga0079104_100004488 554
15 3300027111 Ga0209281_1000129 Ga0209281_100012984 554
16 3300025297 Ga0209758_1000658 Ga0209758_100065827 555
17 3300048925 Ga0496122_0000106 Ga0496122_0000106_28200_29945 555
18 3300048926 Ga0496123_0000022 Ga0496123_0000022_332212_333957 555
19 3300003322 rootL2_10008207 rootL2_100082072 556
20 iso_pu_bacteria 2919171160 2919174359 556
21 3300048927 Ga0496124_0030500 Ga0496124_0030500_2635_4497 557
22 3300025273 Ga0209673_1000005 Ga0209673_1000005286 558
23 3300025295 Ga0209564_1008230 Ga0209564_10082303 558
24 3300025299 Ga0209256_1001150 Ga0209256_100115016 558
25 3300048925 Ga0496122_0000778 Ga0496122_0000778_51405_53246 559
26 3300048926 Ga0496123_0000018 Ga0496123_0000018_106181_108022 559
27 3300048921 Ga0496118_0010764 Ga0496118_0010764_3984_5840 560
28 iso_pu_bacteria 2582581306 2585269256 560
29 iso_pu_bacteria 2718217882 2719181917 560
30 iso_pu_bacteria 2718217997 2719666276 560
31 iso_pu_bacteria 2718218009 2719732634 560
32 iso_pu_bacteria 2718218199 2720492696 560
33 iso_pu_bacteria 2718218232 2720614166 560
34 iso_pu_bacteria 2718218233 2720620934 560
35 iso_pu_bacteria 2718218235 2720632258 560
36 iso_pu_bacteria 2718218269 2720775986 560
37 iso_pu_bacteria 2718218363 2721148008 560
38 iso_pu_bacteria 2718218365 2721159459 560
39 iso_pu_bacteria 2718218366 2721164844 560
40 iso_pu_bacteria 2721755514 2722841014 560
41 iso_pu_bacteria 2721755556 2723027584 560
42 iso_pu_bacteria 2721755684 2723561214 560
43 iso_pu_bacteria 2721755685 2723567836 560
44 iso_pu_bacteria 2721755810 2724045390 560
45 iso_pu_bacteria 2721755819 2724090593 560
46 iso_pu_bacteria 2721755822 2724105101 560
47 iso_pu_bacteria 2721755823 2724110929 560
48 iso_pu_bacteria 2728369352 2730108520 560
49 iso_pu_bacteria 2728369365 2730165152 560
50 iso_pu_bacteria 2728369397 2730299091 560
51 iso_pu_bacteria 2738541333 2739032958 560
52 iso_pu_bacteria 2791355256 2793294317 560
53 iso_pu_bacteria 2791355265 2793351722 560
54 iso_pu_bacteria 2838068647 2838070030 560
55 iso_pu_bacteria 2842205361 2842209697 560
56 iso_pu_bacteria 2842264693 2842270841 560
57 iso_pu_bacteria 2842278818 2842283151 560
58 iso_pu_bacteria 2842285085 2842285484 560
59 iso_pu_bacteria 2842317721 2842320833 560
60 iso_pu_bacteria 2842402390 2842402844 560
61 iso_pu_bacteria 2842409023 2842409785 560
62 iso_pu_bacteria 2842415677 2842416434 560
63 iso_pu_bacteria 2842422224 2842423644 560
64 iso_pu_bacteria 2842428310 2842434724 560
65 iso_pu_bacteria 2842434925 2842441080 560
66 iso_pu_bacteria 2842441272 2842447698 560
67 iso_pu_bacteria 2842447887 2842449433 560
68 iso_pu_bacteria 2842462802 2842469085 560
69 iso_pu_bacteria 2842469257 2842475627 560
70 iso_pu_bacteria 2933599457 2933600836 560
71 iso_pu_bacteria 8005282627 8005284695 560
72 3300041496 Ga0451839_1027583 Ga0451839_1027583_1057_2910 562
73 3300041503 Ga0451847_0367105 Ga0451847_0367105_1673_3526 562
74 3300041505 Ga0451849_0058017 Ga0451849_0058017_1132_2985 562
75 3300046452 Ga0495617_016362 Ga0495617_016362_627_2480 562
76 3300046538 Ga0495609_0020042 Ga0495609_0020042_262_2115 562
77 3300046616 Ga0495668_0025300 Ga0495668_0025300_215_2068 562
78 3300046660 Ga0495625_0040552 Ga0495625_0040552_1205_3058 562
79 iso_pu_bacteria 2923556063 2923560777 562
80 iso_pu_bacteria 2582581294 2585199655 563
81 iso_pu_bacteria 2775506902 2776267719 564
82 3300003187 JGI25151J46595_10002279 JGI25151J46595_100022793 565
83 3300025258 Ga0209129_1000016 Ga0209129_1000016306 565
84 3300025294 Ga0209025_1000126 Ga0209025_100012640 565
85 3300046665 Ga0495661_0042432 Ga0495661_0042432_725_2593 567
86 3300003771 Ga0055526_1003915 Ga0055526_10039154 568
87 3300003790 Ga0055528_1002764 Ga0055528_10027644 568
88 3300025273 Ga0209673_1000025 Ga0209673_1000025315 568
89 3300025295 Ga0209564_1004070 Ga0209564_10040705 568
90 3300025299 Ga0209256_1000924 Ga0209256_10009242 568
91 3300009765 Ga0123341_1000028 Ga0123341_100002839 569
92 3300009766 Ga0123342_1024310 Ga0123342_10243101 569
93 iso_pu_bacteria 8018150411 8018152070 569
94 3300025303 Ga0209051_1023409 Ga0209051_10234092 570
95 3300053125 Ga0500618_000285 Ga0500618_000285_20860_22719 570
96 iso_pu_bacteria 2775507049 2776914410 570
97 3300048924 Ga0496121_0043401 Ga0496121_0043401_249_2102 571
98 3300048925 Ga0496122_0030361 Ga0496122_0030361_1767_3620 571
99 3300048927 Ga0496124_0046286 Ga0496124_0046286_1144_2997 571
100 3300048929 Ga0496126_0095565 Ga0496126_0095565_129_1982 571
101 3300003323 rootH1_10258411 rootH1_102584112 573
102 iso_pu_bacteria 2643221653 2644299101 573
103 iso_pu_bacteria 2643221719 2644657329 573
104 3300028794 Ga0307515_10010024 Ga0307515_100100249 575
105 iso_pu_bacteria 2821123053 2821127253 575
106 iso_pu_bacteria 2838736955 2838740603 575
107 iso_pu_bacteria 2841840854 2841844444 575
108 iso_pu_bacteria 2842140634 2842144488 575
109 iso_pu_bacteria 2857531043 2857534766 575
110 iso_pu_bacteria 2904578770 2904583947 576
111 iso_pu_bacteria 2919119836 2919124317 576
112 iso_pu_bacteria 2989349275 2989350268 576
113 iso_pu_bacteria 2599185236 2599720735 577
114 iso_pu_bacteria 2857516855 2857517306 577
115 iso_pu_bacteria 2891373044 2891376877 577
116 iso_pu_bacteria 2582581304 2585254125 578
117 iso_pu_bacteria 2582581867 2585400432 578
118 iso_pu_bacteria 2585427590 2585824461 578
119 iso_pu_bacteria 2599185156 2599331819 578
120 iso_pu_bacteria 2842922631 2842924227 578
121 iso_pu_bacteria 2854916844 2854922047 578
122 3300005548 Ga0070665_100039851 Ga0070665_1000398512 579
123 3300046530 Ga0495654_0000757 Ga0495654_0000757_16445_18289 579
124 3300048913 Ga0496110_0111124 Ga0496110_0111124_121_1959 579
125 3300048914 Ga0496111_0000161 Ga0496111_0000161_15805_17643 579
126 3300048924 Ga0496121_0023891 Ga0496121_0023891_3552_5387 579
127 3300048926 Ga0496123_0028019 Ga0496123_0028019_1133_2971 579
128 iso_pu_bacteria 2510065019 2510134074 579
129 iso_pu_bacteria 2510461076 2510895499 579
130 iso_pu_bacteria 2513237084 2513567853 579
131 iso_pu_bacteria 2513237085 2513577073 579
132 iso_pu_bacteria 2513237093 2513633260 579
133 iso_pu_bacteria 2513237103 2513707734 579
134 iso_pu_bacteria 2513237162 2514018187 579
135 iso_pu_bacteria 2515075009 2515113177 579
136 iso_pu_bacteria 2515154113 2515638024 579
137 iso_pu_bacteria 2515154116 2515655229 579
138 iso_pu_bacteria 2515154134 2515739607 579
139 iso_pu_bacteria 2516653085 2517077203 579
140 iso_pu_bacteria 2517093000 2517095951 579
141 iso_pu_bacteria 2517287029 2517407574 579
142 iso_pu_bacteria 2585427526 2585524630 579
143 iso_pu_bacteria 2724679232 2725951152 579
144 iso_pu_bacteria 2765235942 2766065994 579
145 iso_pu_bacteria 2838686498 2838686924 579
146 iso_pu_bacteria 2838729681 2838730118 579
147 iso_pu_bacteria 2838742623 2838742867 579
148 iso_pu_bacteria 2841851746 2841852370 579
149 iso_pu_bacteria 2842156927 2842158172 579
150 iso_pu_bacteria 2842163707 2842168669 579
151 iso_pu_bacteria 2842180545 2842181792 579
152 iso_pu_bacteria 2842217011 2842218063 579
153 iso_pu_bacteria 2842229732 2842230158 579
154 iso_pu_bacteria 2842243621 2842244046 579
155 iso_pu_bacteria 2842257432 2842257869 579
156 iso_pu_bacteria 2842271015 2842271538 579
157 iso_pu_bacteria 2842304105 2842305169 579
158 iso_pu_bacteria 2842521101 2842525745 579
159 iso_pu_bacteria 2844454524 2844458221 579
160 iso_pu_bacteria 2935901341 2935901831 579
161 iso_pu_bacteria 2936367885 2936371916 579
162 iso_pu_bacteria 2936375103 2936379751 579
163 iso_pu_bacteria 8005307578 8005309516 579
164 iso_pu_bacteria 8005376324 8005381050 579
165 iso_pu_bacteria 8005460587 8005463860 579
166 iso_pu_bacteria 8005563573 8005568119 579
167 iso_pu_bacteria 8057874678 8057878439 579
168 iso_pu_bacteria 2511231027 2511388457 580
169 iso_pu_bacteria 2529292951 2530646676 580
170 iso_pu_bacteria 2643221558 2643812311 580
171 iso_pu_bacteria 2718217927 2719386529 580
172 iso_pu_bacteria 2718218423 2721400233 580
173 iso_pu_bacteria 2721755809 2724039046 580
174 iso_pu_bacteria 2791355266 2793362021 580
175 iso_pu_bacteria 2838042994 2838045078 580
176 iso_pu_bacteria 2838680041 2838683337 580
177 iso_pu_bacteria 2838694306 2838697719 580
178 iso_pu_bacteria 2838707686 2838710835 580
179 iso_pu_bacteria 2841864319 2841867074 580
180 iso_pu_bacteria 2842077413 2842079008 580
181 iso_pu_bacteria 2842118031 2842118482 580
182 iso_pu_bacteria 2842237096 2842240393 580
183 iso_pu_bacteria 2842291075 2842292670 580
184 iso_pu_bacteria 2842341865 2842347400 580
185 iso_pu_bacteria 2842363717 2842370208 580
186 iso_pu_bacteria 2842370503 2842373968 580
187 iso_pu_bacteria 2842377471 2842379068 580
188 iso_pu_bacteria 2842384541 2842384992 580
189 iso_pu_bacteria 2842395702 2842400228 580
190 iso_pu_bacteria 2842871566 2842875434 580
191 iso_pu_bacteria 2936381700 2936387505 580
192 iso_pu_bacteria 8018176218 8018176932 580
193 3300048927 Ga0496124_0001082 Ga0496124_0001082_40330_42171 581
194 3300048929 Ga0496126_0000207 Ga0496126_0000207_106132_107973 581
195 iso_pu_bacteria 2585427633 2585993440 581
196 iso_pu_bacteria 2765235802 2765469057 581
197 iso_pu_bacteria 2767802442 2770199581 581
198 iso_pu_bacteria 2791355260 2793319296 581
199 iso_pu_bacteria 2818991461 2819682867 581
200 iso_pu_bacteria 2838016132 2838021574 581
201 iso_pu_bacteria 2838022645 2838023734 581
202 iso_pu_bacteria 2838048938 2838053431 581
203 iso_pu_bacteria 2838061910 2838065553 581
204 iso_pu_bacteria 2838668709 2838670482 581
205 iso_pu_bacteria 2838701080 2838702853 581
206 iso_pu_bacteria 2839993093 2839997138 581
207 iso_pu_bacteria 2840764183 2840765679 581
208 iso_pu_bacteria 2842146304 2842147889 581
209 iso_pu_bacteria 2842192696 2842198711 581
210 iso_pu_bacteria 2842198810 2842199248 581
211 iso_pu_bacteria 2842250916 2842252955 581
212 iso_pu_bacteria 2842311132 2842317049 581
213 iso_pu_bacteria 2842489311 2842492190 581
214 iso_pu_bacteria 2842495871 2842496631 581
215 iso_pu_bacteria 2928521798 2928522942 581
216 iso_pu_bacteria 2989771324 2989772869 581
217 iso_pu_bacteria 2996893221 2996895031 581
218 iso_pu_bacteria 8005289223 8005295640 581
219 3300009766 Ga0123342_1017256 Ga0123342_10172563 582
220 3300053156 Ga0500622_0000290 Ga0500622_0000290_21446_23290 582
221 iso_pu_bacteria 2513237088 2513599802 582
222 3300028794 Ga0307515_10002178 Ga0307515_1000217831 583
223 3300031456 Ga0307513_10005733 Ga0307513_100057332 583
224 iso_pu_bacteria 2954011201 2954013693 583
225 iso_pu_bacteria 2510917028 2511183310 584
226 iso_pu_bacteria 2513237144 2513910796 584
227 iso_pu_bacteria 2513237146 2513927247 584
228 iso_pu_bacteria 2513237159 2513999662 584
229 iso_pu_bacteria 2515154114 2515645783 584
230 iso_pu_bacteria 2516653077 2517036839 584
231 iso_pu_bacteria 2582581866 2585395909 584
232 iso_pu_bacteria 2585427528 2585538318 584
233 iso_pu_bacteria 2585427593 2585836271 584
234 iso_pu_bacteria 2599185170 2599415312 584
235 iso_pu_bacteria 2802429633 2806045097 584
236 iso_pu_bacteria 2802429634 2806050109 584
237 iso_pu_bacteria 2802429635 2806056947 584
238 iso_pu_bacteria 2802429636 2806064328 584
239 iso_pu_bacteria 2802429637 2806071595 584
240 iso_pu_bacteria 2838035591 2838038963 584
241 iso_pu_bacteria 2838661181 2838664445 584
242 iso_pu_bacteria 2842110456 2842113144 584
243 iso_pu_bacteria 2933016740 2933023120 584
244 iso_pu_bacteria 2933570622 2933570976 584
245 iso_pu_bacteria 2933586486 2933588799 584
246 iso_pu_bacteria 3005409236 3005413516 584
247 iso_pu_bacteria 639633055 639649300 584
248 iso_pu_bacteria 8005556819 8005556897 584
249 iso_pu_bacteria 8005570704 8005573340 584
250 iso_pu_bacteria 8018163183 8018164451 584
251 iso_pu_bacteria 8023680758 8023683044 584
252 iso_pu_bacteria 8024479707 8024482746 584
253 3300010375 Ga0105239_10032497 Ga0105239_100324972 585
254 3300028794 Ga0307515_10058463 Ga0307515_100584632 585
255 3300037471 Ga0395905_0001410 Ga0395905_0001410_26617_28470 585
256 iso_pu_bacteria 2509276021 2509391909 585
257 iso_pu_bacteria 2509276033 2509447236 585
258 iso_pu_bacteria 2513237138 2513866820 585
259 iso_pu_bacteria 2534681796 2535515906 585
260 iso_pu_bacteria 2791355259 2793315970 585
261 iso_pu_bacteria 2791355267 2793367774 585
262 iso_pu_bacteria 2935894831 2935896895 585
263 iso_pu_bacteria 2996887358 2996888881 585
264 iso_pu_bacteria 3002141150 3002146392 585
265 iso_pu_bacteria 8005258706 8005260152 585
266 iso_pu_bacteria 8005275841 8005281332 585
267 iso_pu_bacteria 8005321885 8005323408 585
268 iso_pu_bacteria 8005542996 8005544544 585
269 iso_pu_bacteria 8005695170 8005697527 585
270 iso_pu_bacteria 8056375014 8056378258 585
271 iso_pu_bacteria 2582581865 2585390748 586
272 iso_pu_bacteria 2615840624 2616293239 586
273 iso_pu_bacteria 2791355261 2793328383 586
274 iso_pu_bacteria 2791355262 2793335339 586
275 iso_pu_bacteria 2791355264 2793347129 586
276 iso_pu_bacteria 2802429605 2805926952 586
277 iso_pu_bacteria 2802429606 2805932865 586
278 iso_pu_bacteria 8005301065 8005303249 586
279 iso_pu_bacteria 8005382845 8005389001 586
280 iso_pu_bacteria 8005395548 8005395985 586
281 iso_pu_bacteria 8005430974 8005437404 586
282 iso_pu_bacteria 8005497431 8005501017 586
283 iso_pu_bacteria 8005619151 8005622384 586
284 iso_pu_bacteria 8005626139 8005629884 586
285 iso_pu_bacteria 8005668836 8005672434 586
286 iso_pu_bacteria 8005688590 8005691978 586
287 iso_pu_bacteria 8018127388 8018128080 586
288 iso_pu_bacteria 8024501048 8024504556 586
289 iso_pu_bacteria 8056382006 8056384298 586
290 3300025929 Ga0207664_10015723 Ga0207664_100157231 587
291 3300046507 Ga0495606_0005830 Ga0495606_0005830_690_2549 587
292 iso_pu_bacteria 2996310559 2996312676 587
293 3300003215 JGI25153J46596_10007882 JGI25153J46596_100078822 588
294 3300003354 JGI25160J50197_1009180 JGI25160J50197_10091802 588
295 3300006186 Ga0075369_10007822 Ga0075369_100078222 588
296 3300009011 Ga0105251_10015996 Ga0105251_100159962 588
297 3300009177 Ga0105248_10080544 Ga0105248_100805442 588
298 3300025273 Ga0209673_1005838 Ga0209673_10058383 588
299 3300025294 Ga0209025_1014746 Ga0209025_10147462 588
300 3300025299 Ga0209256_1014066 Ga0209256_10140662 588
301 3300025302 Ga0207426_1000894 Ga0207426_100089411 588
302 3300046512 Ga0495610_0002969 Ga0495610_0002969_4724_6586 588
303 3300046515 Ga0495620_0012331 Ga0495620_0012331_2155_4023 588
304 3300048909 Ga0496106_0000288 Ga0496106_0000288_25986_27848 588
305 3300053134 Ga0500658_0003763 Ga0500658_0003763_2838_4700 588
306 3300053139 Ga0500568_0005189 Ga0500568_0005189_909_2771 588
307 3300053160 Ga0500633_0000631 Ga0500633_0000631_3059_4921 588
308 3300003792 Ga0055540_1001271 Ga0055540_100127110 589
309 3300025273 Ga0209673_1002289 Ga0209673_10022893 589
310 3300025298 Ga0209050_1003269 Ga0209050_10032699 589
311 3300025303 Ga0209051_1000400 Ga0209051_100040030 589
312 3300048927 Ga0496124_0017079 Ga0496124_0017079_3876_5741 589
313 3300049579 Ga0501043_0015393 Ga0501043_0015393_959_2836 589
314 3300025258 Ga0209129_1006865 Ga0209129_10068652 590
315 iso_pu_bacteria 2510461069 2510839250 590
316 iso_pu_bacteria 2791355263 2793339385 590
317 3300003320 rootH2_10012531 rootH2_1001253117 591
318 3300003322 rootL2_10008491 rootL2_1000849133 591
319 3300048924 Ga0496121_0008563 Ga0496121_0008563_540_2411 591
320 3300048925 Ga0496122_0021890 Ga0496122_0021890_2900_4792 591
321 3300048926 Ga0496123_0013430 Ga0496123_0013430_188_2080 591
322 3300002738 JGI25154J39366_1000051 JGI25154J39366_1000051115 592
323 3300002739 JGI25158J39367_1000140 JGI25158J39367_10001402 592
324 3300003374 JGI25161J50226_1000050 JGI25161J50226_100005030 592
325 3300004625 Ga0055543_1000023 Ga0055543_100002340 592
326 3300025208 Ga0209436_100031 Ga0209436_1000313 592
327 3300025273 Ga0209673_1004169 Ga0209673_10041696 592
328 3300025284 Ga0209130_1000031 Ga0209130_100003170 592
329 3300025295 Ga0209564_1000577 Ga0209564_100057720 592
330 3300025302 Ga0207426_1000042 Ga0207426_1000042340 592
331 3300053125 Ga0500618_000348 Ga0500618_000348_862_2940 592
332 3300002704 JGI25155J39150_1000015 JGI25155J39150_100001557 593
333 3300002705 JGI25156J39149_1000007 JGI25156J39149_100000757 593
334 3300002741 JGI25157J39369_1000012 JGI25157J39369_1000012143 593
335 3300025206 Ga0209435_100006 Ga0209435_100006469 593
336 3300025246 Ga0209646_1000015 Ga0209646_100001565 593
337 3300025250 Ga0209026_1000046 Ga0209026_100004665 593
338 3300025256 Ga0209759_1000005 Ga0209759_1000005469 593
339 3300041413 Ga0439465_0004205 Ga0439465_0004205_1722_3599 593
340 3300046506 Ga0495583_0035276 Ga0495583_0035276_45_1922 593
341 3300046694 Ga0495649_0016288 Ga0495649_0016288_91_1968 593
342 3300047472 Ga0495686_0048104 Ga0495686_0048104_114_1991 593
343 3300048919 Ga0496116_0021157 Ga0496116_0021157_906_2783 593
344 3300048921 Ga0496118_0090312 Ga0496118_0090312_105_1982 593
345 3300053156 Ga0500622_0000559 Ga0500622_0000559_24275_26152 593

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

444

512

0.91

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

572

679

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zbb-assembly2.cif.gz_D p43 crystal of dctbp 0.9657 45 295
3e4q-assembly1.cif.gz_A crystal structure of apo dctb 0.9653 45 295
3e4q-assembly1.cif.gz_A crystal structure of apo dctb 0.9504 45 295
2zbb-assembly2.cif.gz_D p43 crystal of dctbp 0.9472 45 295
3nym-assembly1.cif.gz_B the crystal structure of functionally unknown protein from neisseria meningitidis mc58 0.9378 383 436
ID Description Score Start End Superfamily
3e4pA02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.9617 108 187 3.30.450.20
af_A8JNT7_154_237_1.20.1280.20 Mainly Alpha;Up-down Bundle;Monooxygenase;HscB, C-terminal domain 0.9511 383 436 1.20.1280.20
3by9B02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase;PAS domain 0.946 68 185 3.30.450.20
af_Q9VEF5_13_115_1.10.287.1060 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ESAT-6-like 0.9423 383 440 1.10.287.1060
af_K7K9I2_184_266_1.20.1280.20 Mainly Alpha;Up-down Bundle;Monooxygenase;HscB, C-terminal domain 0.9407 383 433 1.20.1280.20
ID Description Score Start End GO Terms
AF-A0A3D0H032-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9365 486 589 GO:0000155
AF-A0A520GXJ3-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9327 444 591 GO:0000155
AF-A0A2N6BNN1-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9223 472 590 GO:0000155
AF-A0A2V9IAV7-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9024 478 591 GO:0016772
AF-A0A3B8MFZ9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.8993 445 593 GO:0016772

Feature Viewer

pLDDT pTM Quality
80.34 0.5 Medium
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Predicted Structure (AlphaFold2)

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