F417003
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 347 | 162 | 694 | 394 |
Family's Representative Sequence
| Representative Sequence | 3300005289|Ga0065704_10000744|Ga0065704_100007442 |
| Length | 390 |
| Sequence | MPLTELQIKKAKPTEKPYTLSDGLGLSLLIEPNGSKAWRFRYRFDGKPKMLSLGTYEHVSLADARQRRDESRRLVASGVNPSTLRKEQKAAKILSATNTFEAITREWYEHRYDRWSASYREEMMDTFEKDVFPYLGFRPIAEIKPLELLAMLRQVESRGATEKARKVRQRCGEVFRYAIITGRAEYNPAPDLASAMKPHKANNYAHLAVHELPEFLSELNAYTGSVITKIATQLLILTGLRPGEVRRAQWSEIDMENKVWEVPVEHMKMGRPHLVPLSKQAISLLEQIRIVTGRYELIFPGRDFRKPISEASINQVMKRIGYNGRATGHGFRHTMSTILHEKGYNSAWIELQLAHVDKNSIRGTYNHALYLDGRREMMQWYADYMDSFGI |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 2 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 3 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 4 | 3300002772 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS | Metagenome | Endosphere |
| 5 | 3300003751 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 | Metagenome | Endosphere |
| 6 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 8 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 9 | 3300003841 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 10 | 3300003856 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz | Metagenome | Rhizosphere |
| 11 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 13 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 14 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 15 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300015679 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.4_F08 | Metagenome | Unclassified |
| 26 | 3300015680 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.2_H03 | Metagenome | Rhizosphere |
| 27 | 3300015685 | Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 | Metagenome | Unclassified |
| 28 | 3300015687 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 | Metagenome | Rhizosphere |
| 29 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 30 | 3300025207 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 31 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 32 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 33 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 34 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 36 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 38 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 40 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 41 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 47 | 3300027312 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300030500 | Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) | Metagenome | Rhizosphere |
| 49 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 50 | 3300041405 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 | Metagenome | Rhizosphere |
| 51 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 52 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 53 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 54 | 3300044669 | Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2E | Metagenome | Unclassified |
| 55 | 3300046452 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300046458 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere | Metagenome | Rhizosphere |
| 57 | 3300046474 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 64 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 65 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 66 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 67 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 68 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 69 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 70 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 71 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 72 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 73 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 74 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 75 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 76 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 77 | 2506520007 | Serratia plymuthica AS9 | Isolate | Rhizosphere |
| 78 | 2506520008 | Serratia plymuthica AS12 | Isolate | Unclassified |
| 79 | 2508501071 | Serratia proteamaculans S4 | Isolate | Rhizosphere |
| 80 | 2537561728 | Pectobacterium wasabiae CFBP 3304 | Isolate | Rhizoplane |
| 81 | 2585427592 | Rahnella aquatilis OV588 | Isolate | Rhizosphere |
| 82 | 2600255254 | Klebsiella quasipneumoniae NFIX15 | Isolate | Rhizoplane |
| 83 | 2600255255 | Klebsiella quasipneumoniae NFIX23 | Isolate | Rhizoplane |
| 84 | 2600255256 | Enterobacter sp. NFIX08 | Isolate | Rhizoplane |
| 85 | 2600255257 | Enterobacter sp. NFIX03 | Isolate | Rhizoplane |
| 86 | 2600255280 | Klebsiella quasipneumoniae NFIX42 | Isolate | Rhizoplane |
| 87 | 2600255281 | Klebsiella quasipneumoniae NFIX43 | Isolate | Rhizoplane |
| 88 | 2600255287 | Klebsiella quasipneumoniae NFIX11 | Isolate | Rhizoplane |
| 89 | 2600255288 | Klebsiella quasipneumoniae NFIX14 | Isolate | Rhizoplane |
| 90 | 2600255289 | Klebsiella quasipneumoniae NFIX16 | Isolate | Rhizoplane |
| 91 | 2600255290 | Klebsiella quasipneumoniae NFIX17 | Isolate | Rhizoplane |
| 92 | 2600255291 | Klebsiella quasipneumoniae NFIX19 | Isolate | Rhizoplane |
| 93 | 2600255298 | Klebsiella quasipneumoniae NFIX21 | Isolate | Rhizoplane |
| 94 | 2600255299 | Klebsiella quasipneumoniae NFIX22 | Isolate | Rhizoplane |
| 95 | 2600255300 | Klebsiella quasipneumoniae NFIX30 | Isolate | Rhizoplane |
| 96 | 2600255301 | Klebsiella quasipneumoniae NFIX33 | Isolate | Rhizoplane |
| 97 | 2600255302 | Klebsiella quasipneumoniae NFIX35 | Isolate | Rhizoplane |
| 98 | 2600255303 | Klebsiella quasipneumoniae NFIX36 | Isolate | Rhizoplane |
| 99 | 2600255304 | Klebsiella quasipneumoniae NFIX37 | Isolate | Rhizoplane |
| 100 | 2600255305 | Klebsiella quasipneumoniae NFIX41 | Isolate | Rhizoplane |
| 101 | 2600255306 | Klebsiella quasipneumoniae NFIX44 | Isolate | Rhizoplane |
| 102 | 2600255307 | Klebsiella quasipneumoniae NFIX56 | Isolate | Rhizoplane |
| 103 | 2600255309 | Klebsiella sp. NFIX53 | Isolate | Rhizoplane |
| 104 | 2600255310 | Enterobacter sp. NFIX06 | Isolate | Rhizoplane |
| 105 | 2600255311 | Enterobacter sp. NFIX04 | Isolate | Rhizoplane |
| 106 | 2600255392 | Klebsiella quasipneumoniae NFIX54 | Isolate | Rhizoplane |
| 107 | 2602042052 | Klebsiella quasipneumoniae NFIX18 | Isolate | Rhizoplane |
| 108 | 2602042053 | Klebsiella quasipneumoniae NFIX12 | Isolate | Rhizoplane |
| 109 | 2602042066 | Enterobacter sp. NFIX45 | Isolate | Rhizoplane |
| 110 | 2602042067 | Enterobacter sp. NFIX58 | Isolate | Rhizoplane |
| 111 | 2602042103 | Klebsiella quasipneumoniae NFIX29 | Isolate | Rhizoplane |
| 112 | 2602042104 | Klebsiella quasipneumoniae NFIX26 | Isolate | Rhizoplane |
| 113 | 2602042105 | Klebsiella quasipneumoniae NFIX25 | Isolate | Rhizoplane |
| 114 | 2602042106 | Klebsiella quasipneumoniae NFIX13 | Isolate | Rhizoplane |
| 115 | 2602042110 | Klebsiella quasipneumoniae NFIX40 | Isolate | Rhizoplane |
| 116 | 2602042111 | Klebsiella quasipneumoniae NFIX20 | Isolate | Rhizoplane |
| 117 | 2603880178 | Klebsiella quasipneumoniae NFIX34 | Isolate | Rhizoplane |
| 118 | 2603880184 | Klebsiella quasipneumoniae NFIX27 | Isolate | Rhizoplane |
| 119 | 2603880202 | Klebsiella quasipneumoniae NFIX38 | Isolate | Rhizoplane |
| 120 | 2603880211 | Klebsiella quasipneumoniae NFIX24 | Isolate | Rhizoplane |
| 121 | 2648501693 | Pantoea ananatis B1-9 | Isolate | Rhizosphere |
| 122 | 2654587920 | Serratia plymuthica HRO-C48 | Isolate | Rhizosphere |
| 123 | 2667528172 | Enterobacteriaceae bacterium NFIX31 | Isolate | Rhizoplane |
| 124 | 2671180115 | Cedecea sp. NFIX57 | Isolate | Rhizoplane |
| 125 | 2675903046 | Klebsiella quasipneumoniae NFIX52 | Isolate | Rhizoplane |
| 126 | 2681812866 | Enterobacter asburiae NFIX55 | Isolate | Rhizoplane |
| 127 | 2687453601 | Serratia plymuthica 3Rp8 | Isolate | Unclassified |
| 128 | 2751185917 | Enterobacter sp. HK169 | Isolate | Unclassified |
| 129 | 2765235842 | Enterobacter ludwigii AA4 | Isolate | Unclassified |
| 130 | 2772190666 | Serratia surfactantfaciens YD25 | Isolate | Unclassified |
| 131 | 2775507074 | Klebsiella sp. D5A | Isolate | Unclassified |
| 132 | 2791355010 | Kosakonia pseudosacchari NN143 | Isolate | Unclassified |
| 133 | 2811995292 | Kosakonia oryzae Ola 51 | Isolate | Unclassified |
| 134 | 2814123068 | Kosakonia radicincitans GXGL-4A | Isolate | Rhizosphere |
| 135 | 2821118458 | Enterobacter asburiae 609 | Isolate | Unclassified |
| 136 | 2823373977 | Enterobacter ludwigii NCR3 | Isolate | Rhizosphere |
| 137 | 2846540461 | Photorhabdus luminescens HIM3 | Isolate | Rhizosphere |
| 138 | 2852103415 | Edaphovirga cremea DSM 105170 | Isolate | Rhizosphere |
| 139 | 2855195626 | Pectobacterium atrosepticum SS26 | Isolate | Stem Tuber |
| 140 | 2858466076 | Pectobacterium polaris SS28 | Isolate | Stem Tuber |
| 141 | 2869551831 | Serratia inhibens PRI-2C | Isolate | Rhizosphere |
| 142 | 2871282230 | Pectobacterium parmentieri SS90 | Isolate | Stem Tuber |
| 143 | 2888366609 | Serratia sp. NGAS9 | Isolate | Rhizosphere |
| 144 | 2900051742 | Pectobacterium zantedeschiae 2M | Isolate | Stem Tuber |
| 145 | 2904474040 | Rahnella aquatilis 4485 | Isolate | Rhizosphere |
| 146 | 2908669403 | Pantoea coffeiphila 1480 | Isolate | Rhizosphere |
| 147 | 2919150387 | Rahnella aceris 1817 | Isolate | Unclassified |
| 148 | 2923634449 | Enterobacter kobei SLBN-76 | Isolate | Rhizosphere |
| 149 | 2927143783 | Rahnella sp. 2050 | Isolate | Unclassified |
| 150 | 2927833300 | Enterobacter sp. SLBN-59 | Isolate | Rhizosphere |
| 151 | 2932406140 | Serratia sp. 2723 | Isolate | Rhizosphere |
| 152 | 2935625433 | Kosakonia sp. 1610 | Isolate | Rhizosphere |
| 153 | 2939573065 | Citrobacter sp. 506 | Isolate | Rhizosphere |
| 154 | 2939577877 | Serratia sp. 509 | Isolate | Rhizosphere |
| 155 | 2945874760 | Phytobacter diazotrophicus UAEU22 | Isolate | Rhizosphere |
| 156 | 2984494565 | Pantoea ananatis SORGH_AS197 | Isolate | Aerial Root |
| 157 | 2990261002 | Pantoea ananatis SORGH_AS213 | Isolate | Aerial Root |
| 158 | 640753048 | Serratia proteamaculans 568 | Isolate | Endosphere |
| 159 | 8004592986 | Serratia sp. S119 | Isolate | Unclassified |
| 160 | 8015394850 | Serratia sp. PGPR-27 | Isolate | Rhizosphere |
| 161 | 8016733728 | Pantoea sp. SORGH_AS 659 | Isolate | Unclassified |
| 162 | 8054849141 | Dryocola clanedunensis H11S18 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.03 |
| Metatranscriptomes | 0 |
| Isolates | 29.97 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.15 |
| Bulb | 0 |
| Endosphere | 6.34 |
| Nodule | 3.17 |
| Rhizoplane | 14.99 |
| Rhizosphere | 36.31 |
| Stem | 0 |
| Stem Tuber | 2.02 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065704_10000744 | 3300005289 | Bacteria | 13052 |
| 2 | SwRhRL2b_contig_1836092 | 2162886007 | Bacteria | 12329 |
| 3 | SwRhRL2b_contig_580955 | 2162886007 | Bacteria | 4140 |
| 4 | JGI25162J39368_1000002 | 3300002737 | Bacteria | 663004 |
| 5 | JGI25164J39214_1000066 | 3300002772 | Bacteria | 106367 |
| 6 | Ga0055538_1000003 | 3300003751 | Bacteria | 663004 |
| 7 | Ga0055539_1000003 | 3300003752 | Bacteria | 663004 |
| 8 | Ga0055533_1000005 | 3300003756 | Bacteria | 663004 |
| 9 | Ga0055525_1000005 | 3300003759 | Bacteria | 663004 |
| 10 | Ga0055541_1000003 | 3300003841 | Bacteria | 663004 |
| 11 | Ga0058692_1000043 | 3300003856 | Bacteria | 119173 |
| 12 | Ga0058692_1000373 | 3300003856 | Bacteria | 21424 |
| 13 | Ga0058692_1000500 | 3300003856 | Bacteria | 17427 |
| 14 | Ga0065704_10073455 | 3300005289 | Bacteria | 7146 |
| 15 | Ga0070665_100085235 | 3300005548 | Bacteria | 3165 |
| 16 | Ga0068857_100000071 | 3300005577 | Bacteria | 57954 |
| 17 | Ga0075364_10063342 | 3300006051 | Bacteria | 2427 |
| 18 | Ga0079104_1000619 | 3300006946 | Bacteria | 34827 |
| 19 | Ga0079104_1000776 | 3300006946 | Bacteria | 27238 |
| 20 | Ga0079104_1000880 | 3300006946 | Bacteria | 24665 |
| 21 | Ga0079104_1002766 | 3300006946 | Bacteria | 8886 |
| 22 | Ga0079104_1004988 | 3300006946 | Bacteria | 5452 |
| 23 | Ga0079104_1015866 | 3300006946 | Bacteria | 2218 |
| 24 | Ga0105251_10001173 | 3300009011 | Bacteria | 22746 |
| 25 | Ga0105251_10003038 | 3300009011 | Bacteria | 12494 |
| 26 | Ga0105251_10003457 | 3300009011 | Bacteria | 11460 |
| 27 | Ga0105251_10004866 | 3300009011 | Bacteria | 8963 |
| 28 | Ga0105251_10012283 | 3300009011 | Bacteria | 4853 |
| 29 | Ga0105251_10036286 | 3300009011 | Bacteria | 2427 |
| 30 | Ga0105251_10040446 | 3300009011 | Bacteria | 2273 |
| 31 | Ga0105244_10001052 | 3300009036 | Bacteria | 23083 |
| 32 | Ga0105244_10001096 | 3300009036 | Bacteria | 22539 |
| 33 | Ga0105244_10002345 | 3300009036 | Bacteria | 14374 |
| 34 | Ga0105244_10003365 | 3300009036 | Bacteria | 11455 |
| 35 | Ga0105244_10003787 | 3300009036 | Bacteria | 10672 |
| 36 | Ga0105244_10017549 | 3300009036 | Bacteria | 4041 |
| 37 | Ga0105244_10057595 | 3300009036 | Bacteria | 1963 |
| 38 | Ga0105250_10000021 | 3300009092 | Bacteria | 239960 |
| 39 | Ga0105250_10000159 | 3300009092 | Bacteria | 58535 |
| 40 | Ga0105250_10000343 | 3300009092 | Bacteria | 35731 |
| 41 | Ga0105250_10001176 | 3300009092 | Bacteria | 14693 |
| 42 | Ga0105250_10001620 | 3300009092 | Bacteria | 12039 |
| 43 | Ga0105250_10002201 | 3300009092 | Bacteria | 9941 |
| 44 | Ga0105250_10007367 | 3300009092 | Bacteria | 4730 |
| 45 | Ga0105250_10008463 | 3300009092 | Bacteria | 4368 |
| 46 | Ga0105250_10042498 | 3300009092 | Bacteria | 1821 |
| 47 | Ga0105247_10000720 | 3300009101 | Bacteria | 25749 |
| 48 | Ga0157373_10000257 | 3300013100 | Bacteria | 43138 |
| 49 | Ga0157373_10001030 | 3300013100 | Bacteria | 21489 |
| 50 | Ga0157373_10020863 | 3300013100 | Bacteria | 4756 |
| 51 | Ga0157373_10023371 | 3300013100 | Bacteria | 4483 |
| 52 | Ga0157371_10001022 | 3300013102 | Bacteria | 30685 |
| 53 | Ga0157371_10014999 | 3300013102 | Bacteria | 5827 |
| 54 | Ga0157371_10050892 | 3300013102 | Bacteria | 2944 |
| 55 | Ga0157370_10268205 | 3300013104 | Bacteria | 1577 |
| 56 | Ga0157369_10001247 | 3300013105 | Bacteria | 31703 |
| 57 | Ga0163162_10040331 | 3300013306 | Bacteria | 4669 |
| 58 | Ga0157372_10028119 | 3300013307 | Bacteria | 6134 |
| 59 | Ga0183366_1001 | 3300015679 | Bacteria | 2743932 |
| 60 | Ga0183370_1001 | 3300015680 | Bacteria | 2743932 |
| 61 | Ga0183369_1001 | 3300015685 | Bacteria | 2743932 |
| 62 | Ga0183368_1001 | 3300015687 | Bacteria | 2743932 |
| 63 | Ga0213876_10000025 | 3300021384 | Bacteria | 236747 |
| 64 | Ga0209760_100005 | 3300025207 | Bacteria | 238315 |
| 65 | Ga0209784_100001 | 3300025224 | Bacteria | 3600592 |
| 66 | Ga0209566_100001 | 3300025225 | Bacteria | 3600765 |
| 67 | Ga0209674_100002 | 3300025226 | Bacteria | 3600592 |
| 68 | Ga0209563_100002 | 3300025230 | Bacteria | 2045675 |
| 69 | Ga0207427_100009 | 3300025231 | Bacteria | 663036 |
| 70 | Ga0209437_100001 | 3300025233 | Bacteria | 2045675 |
| 71 | Ga0207425_1006808 | 3300025245 | Bacteria | 3088 |
| 72 | Ga0209677_100002 | 3300025253 | Bacteria | 2045675 |
| 73 | Ga0209129_1000021 | 3300025258 | Bacteria | 445018 |
| 74 | Ga0209233_1001826 | 3300025261 | Bacteria | 8169 |
| 75 | Ga0207696_1000046 | 3300025711 | Bacteria | 291327 |
| 76 | Ga0207696_1000061 | 3300025711 | Bacteria | 241730 |
| 77 | Ga0207696_1000067 | 3300025711 | Bacteria | 228478 |
| 78 | Ga0207696_1000944 | 3300025711 | Bacteria | 17786 |
| 79 | Ga0207696_1001206 | 3300025711 | Bacteria | 14701 |
| 80 | Ga0207696_1001357 | 3300025711 | Bacteria | 13442 |
| 81 | Ga0207696_1001584 | 3300025711 | Bacteria | 12047 |
| 82 | Ga0207696_1001983 | 3300025711 | Bacteria | 10382 |
| 83 | Ga0207696_1002024 | 3300025711 | Bacteria | 10260 |
| 84 | Ga0207655_1000050 | 3300025728 | Bacteria | 294923 |
| 85 | Ga0207655_1000147 | 3300025728 | Bacteria | 132140 |
| 86 | Ga0207655_1001263 | 3300025728 | Bacteria | 24122 |
| 87 | Ga0207655_1001404 | 3300025728 | Bacteria | 22435 |
| 88 | Ga0207655_1001581 | 3300025728 | Bacteria | 20446 |
| 89 | Ga0207655_1002788 | 3300025728 | Bacteria | 13581 |
| 90 | Ga0207655_1019305 | 3300025728 | Bacteria | 3570 |
| 91 | Ga0207713_1000023 | 3300025735 | Bacteria | 346097 |
| 92 | Ga0207713_1000148 | 3300025735 | Bacteria | 105384 |
| 93 | Ga0207713_1002410 | 3300025735 | Bacteria | 13652 |
| 94 | Ga0207713_1013410 | 3300025735 | Bacteria | 4320 |
| 95 | Ga0207713_1030734 | 3300025735 | Bacteria | 2388 |
| 96 | Ga0207713_1032216 | 3300025735 | Bacteria | 2305 |
| 97 | Ga0207710_10000024 | 3300025900 | Bacteria | 319633 |
| 98 | Ga0207674_10000067 | 3300026116 | Bacteria | 107803 |
| 99 | Ga0209281_1000378 | 3300027111 | Bacteria | 70786 |
| 100 | Ga0209281_1000465 | 3300027111 | Bacteria | 57106 |
| 101 | Ga0209281_1000811 | 3300027111 | Bacteria | 28502 |
| 102 | Ga0209281_1002250 | 3300027111 | Bacteria | 8199 |
| 103 | Ga0209281_1003113 | 3300027111 | Bacteria | 5777 |
| 104 | Ga0209371_1000050 | 3300027312 | Bacteria | 278645 |
| 105 | Ga0209371_1000334 | 3300027312 | Bacteria | 51398 |
| 106 | Ga0209371_1000599 | 3300027312 | Bacteria | 32316 |
| 107 | Ga0209371_1000833 | 3300027312 | Bacteria | 25364 |
| 108 | Ga0209371_1017652 | 3300027312 | Bacteria | 1842 |
| 109 | Ga0268256_1000017 | 3300030500 | Bacteria | 600718 |
| 110 | Ga0268256_1000323 | 3300030500 | Bacteria | 47340 |
| 111 | Ga0268256_1000518 | 3300030500 | Bacteria | 32316 |
| 112 | Ga0268256_1000621 | 3300030500 | Bacteria | 27689 |
| 113 | Ga0268256_1019400 | 3300030500 | Bacteria | 1863 |
| 114 | Ga0268256_1019663 | 3300030500 | Bacteria | 1842 |
| 115 | Ga0436365_1279401 | 3300039437 | Bacteria | 294819 |
| 116 | Ga0439438_004684 | 3300041405 | Bacteria | 5191 |
| 117 | Ga0439466_0003273 | 3300041411 | Bacteria | 6308 |
| 118 | Ga0439432_017304 | 3300042006 | Bacteria | 2420 |
| 119 | Ga0439452_000017 | 3300042010 | Bacteria | 324897 |
| 120 | Ga0439452_000171 | 3300042010 | Bacteria | 48184 |
| 121 | Ga0466981_0000006 | 3300044669 | Bacteria | 157389 |
| 122 | Ga0466981_0000015 | 3300044669 | Bacteria | 106046 |
| 123 | Ga0495617_027788 | 3300046452 | Bacteria | 1902 |
| 124 | Ga0495591_000126 | 3300046458 | Bacteria | 83383 |
| 125 | Ga0495591_000257 | 3300046458 | Bacteria | 50572 |
| 126 | Ga0495605_0002654 | 3300046474 | Bacteria | 10946 |
| 127 | Ga0495654_0000040 | 3300046530 | Bacteria | 184580 |
| 128 | Ga0495654_0003796 | 3300046530 | Bacteria | 9148 |
| 129 | Ga0495597_0001536 | 3300046542 | Bacteria | 16398 |
| 130 | Ga0495589_0000002 | 3300046794 | Bacteria | 758846 |
| 131 | Ga0495589_0000050 | 3300046794 | Bacteria | 116034 |
| 132 | Ga0495679_000005 | 3300047446 | Bacteria | 455007 |
| 133 | Ga0495673_0000137 | 3300047469 | Bacteria | 134484 |
| 134 | Ga0495673_0000256 | 3300047469 | Bacteria | 74157 |
| 135 | Ga0496101_0000063 | 3300048904 | Bacteria | 125670 |
| 136 | Ga0496104_0027799 | 3300048907 | Bacteria | 5236 |
| 137 | Ga0496116_0000320 | 3300048919 | Bacteria | 78683 |
| 138 | Ga0496116_0000411 | 3300048919 | Bacteria | 61137 |
| 139 | Ga0496116_0000505 | 3300048919 | Bacteria | 53281 |
| 140 | Ga0496116_0010957 | 3300048919 | Bacteria | 7553 |
| 141 | Ga0496116_0023954 | 3300048919 | Bacteria | 4528 |
| 142 | Ga0496117_0001176 | 3300048920 | Bacteria | 39348 |
| 143 | Ga0496117_0001450 | 3300048920 | Bacteria | 34200 |
| 144 | Ga0496117_0001617 | 3300048920 | Bacteria | 31824 |
| 145 | Ga0496117_0001802 | 3300048920 | Bacteria | 29113 |
| 146 | Ga0496117_0002360 | 3300048920 | Bacteria | 24125 |
| 147 | Ga0496117_0005619 | 3300048920 | Bacteria | 13097 |
| 148 | Ga0496117_0013913 | 3300048920 | Bacteria | 6974 |
| 149 | Ga0496117_0016835 | 3300048920 | Bacteria | 6142 |
| 150 | Ga0496117_0017737 | 3300048920 | Bacteria | 5934 |
| 151 | Ga0496117_0028843 | 3300048920 | Bacteria | 4290 |
| 152 | Ga0496117_0065143 | 3300048920 | Bacteria | 2479 |
| 153 | Ga0496117_0103857 | 3300048920 | Bacteria | 1790 |
| 154 | Ga0496117_0124948 | 3300048920 | Bacteria | 1572 |
| 155 | Ga0496118_0001323 | 3300048921 | Bacteria | 37559 |
| 156 | Ga0496118_0002806 | 3300048921 | Bacteria | 22814 |
| 157 | Ga0496118_0003820 | 3300048921 | Bacteria | 18555 |
| 158 | Ga0496118_0004067 | 3300048921 | Bacteria | 17732 |
| 159 | Ga0496118_0006074 | 3300048921 | Bacteria | 13442 |
| 160 | Ga0496118_0006312 | 3300048921 | Bacteria | 13096 |
| 161 | Ga0496118_0006322 | 3300048921 | Bacteria | 13086 |
| 162 | Ga0496118_0008504 | 3300048921 | Bacteria | 10596 |
| 163 | Ga0496118_0009121 | 3300048921 | Bacteria | 10093 |
| 164 | Ga0496118_0009883 | 3300048921 | Bacteria | 9539 |
| 165 | Ga0496118_0011522 | 3300048921 | Bacteria | 8619 |
| 166 | Ga0496119_0000043 | 3300048922 | Bacteria | 192373 |
| 167 | Ga0496119_0001050 | 3300048922 | Bacteria | 35347 |
| 168 | Ga0496119_0001955 | 3300048922 | Bacteria | 23451 |
| 169 | Ga0496119_0002805 | 3300048922 | Bacteria | 18650 |
| 170 | Ga0496119_0003261 | 3300048922 | Bacteria | 16964 |
| 171 | Ga0496119_0004983 | 3300048922 | Bacteria | 12959 |
| 172 | Ga0496119_0005565 | 3300048922 | Bacteria | 11987 |
| 173 | Ga0496119_0005593 | 3300048922 | Bacteria | 11951 |
| 174 | Ga0496119_0006127 | 3300048922 | Bacteria | 11253 |
| 175 | Ga0496119_0017031 | 3300048922 | Bacteria | 5493 |
| 176 | Ga0496119_0018402 | 3300048922 | Bacteria | 5200 |
| 177 | Ga0496119_0022516 | 3300048922 | Bacteria | 4506 |
| 178 | Ga0496119_0070990 | 3300048922 | Bacteria | 2040 |
| 179 | Ga0496120_0000009 | 3300048923 | Bacteria | 386727 |
| 180 | Ga0496120_0000460 | 3300048923 | Bacteria | 64148 |
| 181 | Ga0496120_0000508 | 3300048923 | Bacteria | 60613 |
| 182 | Ga0496120_0001096 | 3300048923 | Bacteria | 35357 |
| 183 | Ga0496120_0001212 | 3300048923 | Bacteria | 32597 |
| 184 | Ga0496120_0001554 | 3300048923 | Bacteria | 26858 |
| 185 | Ga0496120_0003172 | 3300048923 | Bacteria | 15319 |
| 186 | Ga0496120_0003549 | 3300048923 | Bacteria | 14095 |
| 187 | Ga0496120_0004318 | 3300048923 | Bacteria | 12027 |
| 188 | Ga0496120_0004414 | 3300048923 | Bacteria | 11805 |
| 189 | Ga0496120_0062886 | 3300048923 | Bacteria | 2066 |
| 190 | Ga0496121_0002887 | 3300048924 | Bacteria | 25276 |
| 191 | Ga0496121_0004257 | 3300048924 | Bacteria | 19444 |
| 192 | Ga0496121_0007989 | 3300048924 | Bacteria | 12633 |
| 193 | Ga0496121_0013050 | 3300048924 | Bacteria | 8973 |
| 194 | Ga0496121_0018297 | 3300048924 | Bacteria | 7075 |
| 195 | Ga0496121_0022994 | 3300048924 | Bacteria | 6022 |
| 196 | Ga0496121_0027056 | 3300048924 | Bacteria | 5378 |
| 197 | Ga0496121_0035378 | 3300048924 | Bacteria | 4478 |
| 198 | Ga0496122_0000145 | 3300048925 | Bacteria | 165864 |
| 199 | Ga0496122_0001845 | 3300048925 | Bacteria | 32305 |
| 200 | Ga0496122_0003204 | 3300048925 | Bacteria | 21806 |
| 201 | Ga0496122_0006580 | 3300048925 | Bacteria | 13269 |
| 202 | Ga0496122_0025526 | 3300048925 | Bacteria | 5128 |
| 203 | Ga0496122_0030741 | 3300048925 | Bacteria | 4490 |
| 204 | Ga0496122_0151299 | 3300048925 | Bacteria | 1432 |
| 205 | Ga0496123_0000171 | 3300048926 | Bacteria | 130780 |
| 206 | Ga0496123_0000824 | 3300048926 | Bacteria | 49758 |
| 207 | Ga0496123_0005955 | 3300048926 | Bacteria | 12008 |
| 208 | Ga0496123_0008177 | 3300048926 | Bacteria | 9651 |
| 209 | Ga0496123_0010442 | 3300048926 | Bacteria | 8207 |
| 210 | Ga0496123_0015480 | 3300048926 | Bacteria | 6253 |
| 211 | Ga0496123_0075985 | 3300048926 | Bacteria | 2070 |
| 212 | Ga0496124_0003565 | 3300048927 | Bacteria | 18923 |
| 213 | Ga0496124_0004047 | 3300048927 | Bacteria | 17393 |
| 214 | Ga0496124_0006335 | 3300048927 | Bacteria | 12917 |
| 215 | Ga0496124_0007339 | 3300048927 | Bacteria | 11744 |
| 216 | Ga0496124_0008160 | 3300048927 | Bacteria | 10990 |
| 217 | Ga0496124_0011397 | 3300048927 | Bacteria | 8887 |
| 218 | Ga0496124_0014250 | 3300048927 | Bacteria | 7700 |
| 219 | Ga0496124_0015090 | 3300048927 | Bacteria | 7427 |
| 220 | Ga0496124_0015688 | 3300048927 | Bacteria | 7246 |
| 221 | Ga0496124_0022569 | 3300048927 | Bacteria | 5764 |
| 222 | Ga0496124_0052144 | 3300048927 | Bacteria | 3477 |
| 223 | Ga0496124_0125816 | 3300048927 | Bacteria | 2042 |
| 224 | Ga0496125_0000551 | 3300048928 | Bacteria | 64613 |
| 225 | Ga0496125_0001164 | 3300048928 | Bacteria | 39824 |
| 226 | Ga0496125_0002987 | 3300048928 | Bacteria | 21204 |
| 227 | Ga0496125_0007360 | 3300048928 | Bacteria | 11721 |
| 228 | Ga0496125_0008204 | 3300048928 | Bacteria | 10985 |
| 229 | Ga0496125_0014024 | 3300048928 | Bacteria | 7835 |
| 230 | Ga0496125_0014863 | 3300048928 | Bacteria | 7559 |
| 231 | Ga0496125_0016505 | 3300048928 | Bacteria | 7086 |
| 232 | Ga0496126_0002549 | 3300048929 | Bacteria | 24387 |
| 233 | Ga0496126_0002598 | 3300048929 | Bacteria | 24076 |
| 234 | Ga0496126_0003906 | 3300048929 | Bacteria | 18315 |
| 235 | Ga0496126_0004428 | 3300048929 | Bacteria | 16808 |
| 236 | Ga0496126_0004652 | 3300048929 | Bacteria | 16227 |
| 237 | Ga0496126_0005781 | 3300048929 | Bacteria | 13984 |
| 238 | Ga0496126_0007202 | 3300048929 | Bacteria | 12241 |
| 239 | Ga0496126_0008291 | 3300048929 | Bacteria | 11223 |
| 240 | Ga0496126_0034532 | 3300048929 | Bacteria | 4749 |
| 241 | Ga0496126_0044547 | 3300048929 | Bacteria | 4084 |
| 242 | Ga0496126_0064158 | 3300048929 | Bacteria | 3291 |
| 243 | nmdc:mga00v17_90114_c1 | 3300050491 | Bacteria | 1925 |
| 244 | 2506580190 | 2506520007 | Bacteria | 5442880 |
| 245 | 2506585329 | 2506520008 | Bacteria | 5443009 |
| 246 | 2508850021 | 2508501071 | Bacteria | 5454741 |
| 247 | 2538425453 | 2537561728 | Bacteria | 5149301 |
| 248 | 2538425501 | 2537561728 | Bacteria | 5149301 |
| 249 | 2538428133 | 2537561728 | Bacteria | 5149301 |
| 250 | 2585831237 | 2585427592 | Bacteria | 5370892 |
| 251 | 2601525321 | 2600255254 | Bacteria | 5281859 |
| 252 | 2601530509 | 2600255255 | Bacteria | 5282785 |
| 253 | 2601531817 | 2600255256 | Bacteria | 5597742 |
| 254 | 2601537189 | 2600255257 | Bacteria | 5597196 |
| 255 | 2601540043 | 2600255257 | Bacteria | 5597196 |
| 256 | 2601616887 | 2600255280 | Bacteria | 5292309 |
| 257 | 2601621765 | 2600255281 | Bacteria | 5288753 |
| 258 | 2601643745 | 2600255287 | Bacteria | 5210468 |
| 259 | 2601651219 | 2600255288 | Bacteria | 5282738 |
| 260 | 2601655089 | 2600255289 | Bacteria | 5281907 |
| 261 | 2601661736 | 2600255290 | Bacteria | 5282218 |
| 262 | 2601663570 | 2600255291 | Bacteria | 5217298 |
| 263 | 2601696549 | 2600255298 | Bacteria | 5215185 |
| 264 | 2601701202 | 2600255299 | Bacteria | 5218662 |
| 265 | 2601709540 | 2600255300 | Bacteria | 5287774 |
| 266 | 2601714073 | 2600255301 | Bacteria | 5280532 |
| 267 | 2601718649 | 2600255302 | Bacteria | 5288235 |
| 268 | 2601721573 | 2600255303 | Bacteria | 5219315 |
| 269 | 2601728119 | 2600255304 | Bacteria | 5283973 |
| 270 | 2601733596 | 2600255305 | Bacteria | 5282329 |
| 271 | 2601738944 | 2600255306 | Bacteria | 5281613 |
| 272 | 2601744458 | 2600255307 | Bacteria | 5439064 |
| 273 | 2601754992 | 2600255309 | Bacteria | 5431045 |
| 274 | 2601755535 | 2600255310 | Bacteria | 5600903 |
| 275 | 2601758666 | 2600255310 | Bacteria | 5600903 |
| 276 | 2601760902 | 2600255311 | Bacteria | 5598766 |
| 277 | 2601764780 | 2600255311 | Bacteria | 5598766 |
| 278 | 2602022257 | 2600255392 | Bacteria | 5437392 |
| 279 | 2603660957 | 2602042052 | Bacteria | 5215873 |
| 280 | 2603666231 | 2602042053 | Bacteria | 5214361 |
| 281 | 2603697921 | 2602042066 | Bacteria | 4423871 |
| 282 | 2603704556 | 2602042067 | Bacteria | 4863713 |
| 283 | 2603840710 | 2602042103 | Bacteria | 5284714 |
| 284 | 2603845628 | 2602042104 | Bacteria | 5281639 |
| 285 | 2603850702 | 2602042105 | Bacteria | 5282303 |
| 286 | 2603855927 | 2602042106 | Bacteria | 5282744 |
| 287 | 2603873508 | 2602042110 | Bacteria | 5283285 |
| 288 | 2603877044 | 2602042111 | Bacteria | 5212080 |
| 289 | 2606050530 | 2603880178 | Bacteria | 5283018 |
| 290 | 2606070664 | 2603880184 | Bacteria | 5217896 |
| 291 | 2606148214 | 2603880202 | Bacteria | 5284684 |
| 292 | 2606178577 | 2603880211 | Bacteria | 5284226 |
| 293 | 2650898691 | 2648501693 | Bacteria | 5069560 |
| 294 | 2656275889 | 2654587920 | Bacteria | 5475511 |
| 295 | 2671101062 | 2667528172 | Bacteria | 5170840 |
| 296 | 2671102068 | 2667528172 | Bacteria | 5170840 |
| 297 | 2671585189 | 2671180115 | Bacteria | 5353919 |
| 298 | 2676406957 | 2675903046 | Bacteria | 5451247 |
| 299 | 2681996042 | 2681812866 | Bacteria | 4552357 |
| 300 | 2689443603 | 2687453601 | Bacteria | 5546041 |
| 301 | 2753854781 | 2751185917 | Bacteria | 4551186 |
| 302 | 2765587646 | 2765235842 | Bacteria | 4799256 |
| 303 | 2772436634 | 2772190666 | Bacteria | 5117644 |
| 304 | 2777023689 | 2775507074 | Bacteria | 5532402 |
| 305 | 2792312155 | 2791355010 | Bacteria | 4864581 |
| 306 | 2813730382 | 2811995292 | Bacteria | 5303342 |
| 307 | 2814697637 | 2814123068 | Bacteria | 5687681 |
| 308 | 2821118501 | 2821118458 | Bacteria | 4714306 |
| 309 | 2823377895 | 2823373977 | Bacteria | 4779415 |
| 310 | 2846540923 | 2846540461 | Bacteria | 5471451 |
| 311 | 2852103584 | 2852103415 | Bacteria | 5193810 |
| 312 | 2855197978 | 2855195626 | Bacteria | 4927512 |
| 313 | 2855198472 | 2855195626 | Bacteria | 4927512 |
| 314 | 2858469269 | 2858466076 | Bacteria | 4722413 |
| 315 | 2869552969 | 2869551831 | Bacteria | 5474685 |
| 316 | 2871283030 | 2871282230 | Bacteria | 4917173 |
| 317 | 2871284491 | 2871282230 | Bacteria | 4917173 |
| 318 | 2871285898 | 2871282230 | Bacteria | 4917173 |
| 319 | 2888366672 | 2888366609 | Bacteria | 5155009 |
| 320 | 2900053100 | 2900051742 | Bacteria | 4985156 |
| 321 | 2904476099 | 2904474040 | Bacteria | 5504324 |
| 322 | 2908671191 | 2908669403 | Bacteria | 5740494 |
| 323 | 2919152268 | 2919150387 | Bacteria | 5500879 |
| 324 | 2923635947 | 2923634449 | Bacteria | 4753480 |
| 325 | 2927144937 | 2927143783 | Bacteria | 5504251 |
| 326 | 2927835166 | 2927833300 | Bacteria | 4923934 |
| 327 | 2927835357 | 2927833300 | Bacteria | 4923934 |
| 328 | 2932409969 | 2932406140 | Bacteria | 5134491 |
| 329 | 2932410035 | 2932406140 | Bacteria | 5134491 |
| 330 | 2935629779 | 2935625433 | Bacteria | 5042964 |
| 331 | 2939575418 | 2939573065 | Bacteria | 4926053 |
| 332 | 2939581028 | 2939577877 | Bacteria | 5132791 |
| 333 | 2939581375 | 2939577877 | Bacteria | 5132791 |
| 334 | 2945879261 | 2945874760 | Bacteria | 5527237 |
| 335 | 2945879524 | 2945874760 | Bacteria | 5527237 |
| 336 | 2984495663 | 2984494565 | Bacteria | 5000175 |
| 337 | 2984496357 | 2984494565 | Bacteria | 5000175 |
| 338 | 2990261778 | 2990261002 | Bacteria | 4919493 |
| 339 | 2990264358 | 2990261002 | Bacteria | 4919493 |
| 340 | 640935594 | 640753048 | Bacteria | 5495657 |
| 341 | 640939447 | 640753048 | Bacteria | 5495657 |
| 342 | 8004594448 | 8004592986 | Bacteria | 5122074 |
| 343 | 8015398974 | 8015394850 | Bacteria | 5064660 |
| 344 | 8015399787 | 8015394850 | Bacteria | 5064660 |
| 345 | 8016736842 | 8016733728 | Bacteria | 5274317 |
| 346 | 8054850836 | 8054849141 | Bacteria | 5232694 |
| 347 | 8054851176 | 8054849141 | Bacteria | 5232694 |
| 348 | Ga0065704_10000744 | |||
| 349 | SwRhRL2b_contig_1836092 | |||
| 350 | SwRhRL2b_contig_580955 | |||
| 351 | JGI25162J39368_1000002 | |||
| 352 | JGI25164J39214_1000066 | |||
| 353 | Ga0055538_1000003 | |||
| 354 | Ga0055539_1000003 | |||
| 355 | Ga0055533_1000005 | |||
| 356 | Ga0055525_1000005 | |||
| 357 | Ga0055541_1000003 | |||
| 358 | Ga0058692_1000043 | |||
| 359 | Ga0058692_1000373 | |||
| 360 | Ga0058692_1000500 | |||
| 361 | Ga0065704_10073455 | |||
| 362 | Ga0070665_100085235 | |||
| 363 | Ga0068857_100000071 | |||
| 364 | Ga0075364_10063342 | |||
| 365 | Ga0079104_1000619 | |||
| 366 | Ga0079104_1000776 | |||
| 367 | Ga0079104_1000880 | |||
| 368 | Ga0079104_1002766 | |||
| 369 | Ga0079104_1004988 | |||
| 370 | Ga0079104_1015866 | |||
| 371 | Ga0105251_10001173 | |||
| 372 | Ga0105251_10003038 | |||
| 373 | Ga0105251_10003457 | |||
| 374 | Ga0105251_10004866 | |||
| 375 | Ga0105251_10012283 | |||
| 376 | Ga0105251_10036286 | |||
| 377 | Ga0105251_10040446 | |||
| 378 | Ga0105244_10001052 | |||
| 379 | Ga0105244_10001096 | |||
| 380 | Ga0105244_10002345 | |||
| 381 | Ga0105244_10003365 | |||
| 382 | Ga0105244_10003787 | |||
| 383 | Ga0105244_10017549 | |||
| 384 | Ga0105244_10057595 | |||
| 385 | Ga0105250_10000021 | |||
| 386 | Ga0105250_10000159 | |||
| 387 | Ga0105250_10000343 | |||
| 388 | Ga0105250_10001176 | |||
| 389 | Ga0105250_10001620 | |||
| 390 | Ga0105250_10002201 | |||
| 391 | Ga0105250_10007367 | |||
| 392 | Ga0105250_10008463 | |||
| 393 | Ga0105250_10042498 | |||
| 394 | Ga0105247_10000720 | |||
| 395 | Ga0157373_10000257 | |||
| 396 | Ga0157373_10001030 | |||
| 397 | Ga0157373_10020863 | |||
| 398 | Ga0157373_10023371 | |||
| 399 | Ga0157371_10001022 | |||
| 400 | Ga0157371_10014999 | |||
| 401 | Ga0157371_10050892 | |||
| 402 | Ga0157370_10268205 | |||
| 403 | Ga0157369_10001247 | |||
| 404 | Ga0163162_10040331 | |||
| 405 | Ga0157372_10028119 | |||
| 406 | Ga0183366_1001 | |||
| 407 | Ga0183370_1001 | |||
| 408 | Ga0183369_1001 | |||
| 409 | Ga0183368_1001 | |||
| 410 | Ga0213876_10000025 | |||
| 411 | Ga0209760_100005 | |||
| 412 | Ga0209784_100001 | |||
| 413 | Ga0209566_100001 | |||
| 414 | Ga0209674_100002 | |||
| 415 | Ga0209563_100002 | |||
| 416 | Ga0207427_100009 | |||
| 417 | Ga0209437_100001 | |||
| 418 | Ga0207425_1006808 | |||
| 419 | Ga0209677_100002 | |||
| 420 | Ga0209129_1000021 | |||
| 421 | Ga0209233_1001826 | |||
| 422 | Ga0207696_1000046 | |||
| 423 | Ga0207696_1000061 | |||
| 424 | Ga0207696_1000067 | |||
| 425 | Ga0207696_1000944 | |||
| 426 | Ga0207696_1001206 | |||
| 427 | Ga0207696_1001357 | |||
| 428 | Ga0207696_1001584 | |||
| 429 | Ga0207696_1001983 | |||
| 430 | Ga0207696_1002024 | |||
| 431 | Ga0207655_1000050 | |||
| 432 | Ga0207655_1000147 | |||
| 433 | Ga0207655_1001263 | |||
| 434 | Ga0207655_1001404 | |||
| 435 | Ga0207655_1001581 | |||
| 436 | Ga0207655_1002788 | |||
| 437 | Ga0207655_1019305 | |||
| 438 | Ga0207713_1000023 | |||
| 439 | Ga0207713_1000148 | |||
| 440 | Ga0207713_1002410 | |||
| 441 | Ga0207713_1013410 | |||
| 442 | Ga0207713_1030734 | |||
| 443 | Ga0207713_1032216 | |||
| 444 | Ga0207710_10000024 | |||
| 445 | Ga0207674_10000067 | |||
| 446 | Ga0209281_1000378 | |||
| 447 | Ga0209281_1000465 | |||
| 448 | Ga0209281_1000811 | |||
| 449 | Ga0209281_1002250 | |||
| 450 | Ga0209281_1003113 | |||
| 451 | Ga0209371_1000050 | |||
| 452 | Ga0209371_1000334 | |||
| 453 | Ga0209371_1000599 | |||
| 454 | Ga0209371_1000833 | |||
| 455 | Ga0209371_1017652 | |||
| 456 | Ga0268256_1000017 | |||
| 457 | Ga0268256_1000323 | |||
| 458 | Ga0268256_1000518 | |||
| 459 | Ga0268256_1000621 | |||
| 460 | Ga0268256_1019400 | |||
| 461 | Ga0268256_1019663 | |||
| 462 | Ga0436365_1279401 | |||
| 463 | Ga0439438_004684 | |||
| 464 | Ga0439466_0003273 | |||
| 465 | Ga0439432_017304 | |||
| 466 | Ga0439452_000017 | |||
| 467 | Ga0439452_000171 | |||
| 468 | Ga0466981_0000006 | |||
| 469 | Ga0466981_0000015 | |||
| 470 | Ga0495617_027788 | |||
| 471 | Ga0495591_000126 | |||
| 472 | Ga0495591_000257 | |||
| 473 | Ga0495605_0002654 | |||
| 474 | Ga0495654_0000040 | |||
| 475 | Ga0495654_0003796 | |||
| 476 | Ga0495597_0001536 | |||
| 477 | Ga0495589_0000002 | |||
| 478 | Ga0495589_0000050 | |||
| 479 | Ga0495679_000005 | |||
| 480 | Ga0495673_0000137 | |||
| 481 | Ga0495673_0000256 | |||
| 482 | Ga0496101_0000063 | |||
| 483 | Ga0496104_0027799 | |||
| 484 | Ga0496116_0000320 | |||
| 485 | Ga0496116_0000411 | |||
| 486 | Ga0496116_0000505 | |||
| 487 | Ga0496116_0010957 | |||
| 488 | Ga0496116_0023954 | |||
| 489 | Ga0496117_0001176 | |||
| 490 | Ga0496117_0001450 | |||
| 491 | Ga0496117_0001617 | |||
| 492 | Ga0496117_0001802 | |||
| 493 | Ga0496117_0002360 | |||
| 494 | Ga0496117_0005619 | |||
| 495 | Ga0496117_0013913 | |||
| 496 | Ga0496117_0016835 | |||
| 497 | Ga0496117_0017737 | |||
| 498 | Ga0496117_0028843 | |||
| 499 | Ga0496117_0065143 | |||
| 500 | Ga0496117_0103857 | |||
| 501 | Ga0496117_0124948 | |||
| 502 | Ga0496118_0001323 | |||
| 503 | Ga0496118_0002806 | |||
| 504 | Ga0496118_0003820 | |||
| 505 | Ga0496118_0004067 | |||
| 506 | Ga0496118_0006074 | |||
| 507 | Ga0496118_0006312 | |||
| 508 | Ga0496118_0006322 | |||
| 509 | Ga0496118_0008504 | |||
| 510 | Ga0496118_0009121 | |||
| 511 | Ga0496118_0009883 | |||
| 512 | Ga0496118_0011522 | |||
| 513 | Ga0496119_0000043 | |||
| 514 | Ga0496119_0001050 | |||
| 515 | Ga0496119_0001955 | |||
| 516 | Ga0496119_0002805 | |||
| 517 | Ga0496119_0003261 | |||
| 518 | Ga0496119_0004983 | |||
| 519 | Ga0496119_0005565 | |||
| 520 | Ga0496119_0005593 | |||
| 521 | Ga0496119_0006127 | |||
| 522 | Ga0496119_0017031 | |||
| 523 | Ga0496119_0018402 | |||
| 524 | Ga0496119_0022516 | |||
| 525 | Ga0496119_0070990 | |||
| 526 | Ga0496120_0000009 | |||
| 527 | Ga0496120_0000460 | |||
| 528 | Ga0496120_0000508 | |||
| 529 | Ga0496120_0001096 | |||
| 530 | Ga0496120_0001212 | |||
| 531 | Ga0496120_0001554 | |||
| 532 | Ga0496120_0003172 | |||
| 533 | Ga0496120_0003549 | |||
| 534 | Ga0496120_0004318 | |||
| 535 | Ga0496120_0004414 | |||
| 536 | Ga0496120_0062886 | |||
| 537 | Ga0496121_0002887 | |||
| 538 | Ga0496121_0004257 | |||
| 539 | Ga0496121_0007989 | |||
| 540 | Ga0496121_0013050 | |||
| 541 | Ga0496121_0018297 | |||
| 542 | Ga0496121_0022994 | |||
| 543 | Ga0496121_0027056 | |||
| 544 | Ga0496121_0035378 | |||
| 545 | Ga0496122_0000145 | |||
| 546 | Ga0496122_0001845 | |||
| 547 | Ga0496122_0003204 | |||
| 548 | Ga0496122_0006580 | |||
| 549 | Ga0496122_0025526 | |||
| 550 | Ga0496122_0030741 | |||
| 551 | Ga0496122_0151299 | |||
| 552 | Ga0496123_0000171 | |||
| 553 | Ga0496123_0000824 | |||
| 554 | Ga0496123_0005955 | |||
| 555 | Ga0496123_0008177 | |||
| 556 | Ga0496123_0010442 | |||
| 557 | Ga0496123_0015480 | |||
| 558 | Ga0496123_0075985 | |||
| 559 | Ga0496124_0003565 | |||
| 560 | Ga0496124_0004047 | |||
| 561 | Ga0496124_0006335 | |||
| 562 | Ga0496124_0007339 | |||
| 563 | Ga0496124_0008160 | |||
| 564 | Ga0496124_0011397 | |||
| 565 | Ga0496124_0014250 | |||
| 566 | Ga0496124_0015090 | |||
| 567 | Ga0496124_0015688 | |||
| 568 | Ga0496124_0022569 | |||
| 569 | Ga0496124_0052144 | |||
| 570 | Ga0496124_0125816 | |||
| 571 | Ga0496125_0000551 | |||
| 572 | Ga0496125_0001164 | |||
| 573 | Ga0496125_0002987 | |||
| 574 | Ga0496125_0007360 | |||
| 575 | Ga0496125_0008204 | |||
| 576 | Ga0496125_0014024 | |||
| 577 | Ga0496125_0014863 | |||
| 578 | Ga0496125_0016505 | |||
| 579 | Ga0496126_0002549 | |||
| 580 | Ga0496126_0002598 | |||
| 581 | Ga0496126_0003906 | |||
| 582 | Ga0496126_0004428 | |||
| 583 | Ga0496126_0004652 | |||
| 584 | Ga0496126_0005781 | |||
| 585 | Ga0496126_0007202 | |||
| 586 | Ga0496126_0008291 | |||
| 587 | Ga0496126_0034532 | |||
| 588 | Ga0496126_0044547 | |||
| 589 | Ga0496126_0064158 | |||
| 590 | nmdc:mga00v17_90114_c1 | |||
| 591 | 2506580190 | |||
| 592 | 2506585329 | |||
| 593 | 2508850021 | |||
| 594 | 2538425453 | |||
| 595 | 2538425501 | |||
| 596 | 2538428133 | |||
| 597 | 2585831237 | |||
| 598 | 2601525321 | |||
| 599 | 2601530509 | |||
| 600 | 2601531817 | |||
| 601 | 2601537189 | |||
| 602 | 2601540043 | |||
| 603 | 2601616887 | |||
| 604 | 2601621765 | |||
| 605 | 2601643745 | |||
| 606 | 2601651219 | |||
| 607 | 2601655089 | |||
| 608 | 2601661736 | |||
| 609 | 2601663570 | |||
| 610 | 2601696549 | |||
| 611 | 2601701202 | |||
| 612 | 2601709540 | |||
| 613 | 2601714073 | |||
| 614 | 2601718649 | |||
| 615 | 2601721573 | |||
| 616 | 2601728119 | |||
| 617 | 2601733596 | |||
| 618 | 2601738944 | |||
| 619 | 2601744458 | |||
| 620 | 2601754992 | |||
| 621 | 2601755535 | |||
| 622 | 2601758666 | |||
| 623 | 2601760902 | |||
| 624 | 2601764780 | |||
| 625 | 2602022257 | |||
| 626 | 2603660957 | |||
| 627 | 2603666231 | |||
| 628 | 2603697921 | |||
| 629 | 2603704556 | |||
| 630 | 2603840710 | |||
| 631 | 2603845628 | |||
| 632 | 2603850702 | |||
| 633 | 2603855927 | |||
| 634 | 2603873508 | |||
| 635 | 2603877044 | |||
| 636 | 2606050530 | |||
| 637 | 2606070664 | |||
| 638 | 2606148214 | |||
| 639 | 2606178577 | |||
| 640 | 2650898691 | |||
| 641 | 2656275889 | |||
| 642 | 2671101062 | |||
| 643 | 2671102068 | |||
| 644 | 2671585189 | |||
| 645 | 2676406957 | |||
| 646 | 2681996042 | |||
| 647 | 2689443603 | |||
| 648 | 2753854781 | |||
| 649 | 2765587646 | |||
| 650 | 2772436634 | |||
| 651 | 2777023689 | |||
| 652 | 2792312155 | |||
| 653 | 2813730382 | |||
| 654 | 2814697637 | |||
| 655 | 2821118501 | |||
| 656 | 2823377895 | |||
| 657 | 2846540923 | |||
| 658 | 2852103584 | |||
| 659 | 2855197978 | |||
| 660 | 2855198472 | |||
| 661 | 2858469269 | |||
| 662 | 2869552969 | |||
| 663 | 2871283030 | |||
| 664 | 2871284491 | |||
| 665 | 2871285898 | |||
| 666 | 2888366672 | |||
| 667 | 2900053100 | |||
| 668 | 2904476099 | |||
| 669 | 2908671191 | |||
| 670 | 2919152268 | |||
| 671 | 2923635947 | |||
| 672 | 2927144937 | |||
| 673 | 2927835166 | |||
| 674 | 2927835357 | |||
| 675 | 2932409969 | |||
| 676 | 2932410035 | |||
| 677 | 2935629779 | |||
| 678 | 2939575418 | |||
| 679 | 2939581028 | |||
| 680 | 2939581375 | |||
| 681 | 2945879261 | |||
| 682 | 2945879524 | |||
| 683 | 2984495663 | |||
| 684 | 2984496357 | |||
| 685 | 2990261778 | |||
| 686 | 2990264358 | |||
| 687 | 640935594 | |||
| 688 | 640939447 | |||
| 689 | 8004594448 | |||
| 690 | 8015398974 | |||
| 691 | 8015399787 | |||
| 692 | 8016736842 | |||
| 693 | 8054850836 | |||
| 694 | 8054851176 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3jtz-assembly1.cif.gz_A | structure of the arm-type binding domain of hpi integrase | 0.961 | 3 | 76 |
| 3rmp-assembly1.cif.gz_C | structural basis for the recognition of attp substrates by p4-like integrases | 0.958 | 3 | 76 |
| 3ju0-assembly1.cif.gz_A | structure of the arm-type binding domain of hai7 integrase | 0.9576 | 3 | 83 |
| 3jtz-assembly1.cif.gz_A | structure of the arm-type binding domain of hpi integrase | 0.9134 | 3 | 76 |
| 3rmp-assembly1.cif.gz_C | structural basis for the recognition of attp substrates by p4-like integrases | 0.9094 | 3 | 76 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P39347_1_63_3.30.160.390 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain | 0.985 | 28 | 87 | 3.30.160.390 |
| af_P37326_1_84_3.30.160.390 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain | 0.9733 | 3 | 84 | 3.30.160.390 |
| af_P32053_7_95_3.30.160.390 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain | 0.9632 | 2 | 87 | 3.30.160.390 |
| 3rmpC00 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain | 0.958 | 3 | 76 | 3.30.160.390 |
| 3ju0A00 | Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Integrase, DNA-binding domain | 0.9576 | 3 | 83 | 3.30.160.390 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A059Y1C7-F1-model_v4 | Integrase DNA-binding domain-containing protein | 0.9823 | 1 | 93 |
GO:0015074
|
| AF-A0A6M0D283-F1-model_v4 | DUF4102 domain-containing protein | 0.9802 | 1 | 81 |
GO:0015074
|
| AF-A0A4Q5QP63-F1-model_v4 | DUF4102 domain-containing protein | 0.9771 | 3 | 97 |
GO:0015074
|
| AF-A0A239J020-F1-model_v4 | Integrase DNA-binding domain-containing protein | 0.977 | 1 | 83 |
GO:0015074
|
| AF-Q72AY5-F1-model_v4 | Integrase, truncation | 0.9765 | 1 | 82 |
GO:0015074
|