F417255

General Info

Members Datasets Scaffolds Average Seq Length
347 180 694 743

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0019304|Ga0495651_0019304_1349_3949
Length 866
Sequence MQTPVKFVKRIGERIAAGLHERGIETVEDLLYHLPFRYEDRLHPKPLSAYQPGEMASVIGEVRGAVLLRTRSGPIFEMTVGVAPLESANGAPYNSLGWTVEREQSSQATGSPRNTPQNENQRAEGPTYNEPAMDGLLRPPPIFETVKCLWFHGSYLRDRFRPGQRIALYGKLEGSRSGNALNAPPGSTKFKMVQPTFEILPDVSATGEDAEFTTLEMGRIVPVYPSVGGTTPWGAKLTSRWLRRVMWTIFKELKESGARAEETLPQALCERLGLPSRMEALEAIHFPAAGTSMTELMSARTPAHRRLIFEELWYLELGLELKRRRLREREGTAFVTNDQVRAALKQVLPFKPTAAQKRVLGEIVEDMRAPRPMRRLLQGDVGSGKTIVALEAALVAIENGYQVAMMAPTEILATQHYLSARKLLRDALSPSKQRPYRVTLLTGSLDDRMKRDARGRIFRGETDLAIGTHALVEEKVDFENLGLVIVDEQHRFGVQQRFKLMRKPGASRAAMEPDVLVMTATPIPRTLALTIYGDLEASVLDELPPGRTPIVTRRMPEERADEVWEFVRKQVEAGRQAYIVYPIIEGERDDQPELDFANDNAAEPALAEDGKKSAKGAPYTSLGRMVGSERSLRTAGSPRKVARGKGSRAEGPALLPGVKPNRPKLRSASEMFDELSSGALHGLKLGLLHGRMSADDKDVTMARFQRGEIDVLVSTTVIEVGVDVPNAAVMVIEHAERFGLAQMHQLRGRVGRGAAKSYCVLLTGSKISPEAELRLDAMVQTQDGFALAEIDLAQRGPGEFFGTRQAGLPEFRVANLARDRDLLELAKSEAARFVESPAPEISKSERDAVWTRLKRQWQRRYGLVEA

Samples

Sample ID Description Type Environment
1 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
47 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
48 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
49 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
50 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
56 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
57 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
58 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
59 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
90 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
91 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
92 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
93 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
96 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
106 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
107 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
108 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
131 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
132 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
142 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
143 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
146 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
152 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
174 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
175 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
176 2547132424 Nocardia nova SH22a Isolate Unclassified
177 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
178 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
179 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
180 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.27
Metatranscriptomes 0.29
Isolates 1.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.86
Nodule 0
Rhizoplane 3.75
Rhizosphere 91.93
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495651_0019304 3300046462 Bacteria 5284
2 LJNas_1000333 3300000546 Bacteria 8274
3 Ga0065715_10004299 3300005293 Bacteria 5190
4 Ga0070658_10000151 3300005327 Bacteria 61042
5 Ga0070658_10006638 3300005327 Bacteria 9373
6 Ga0070658_10017065 3300005327 Bacteria 5810
7 Ga0070658_10025817 3300005327 Bacteria 4710
8 Ga0070683_100012119 3300005329 Bacteria 7483
9 Ga0070683_100018566 3300005329 Bacteria 6163
10 Ga0070680_100076602 3300005336 Bacteria 2753
11 Ga0070661_100044877 3300005344 Bacteria 3230
12 Ga0070671_100005346 3300005355 Bacteria 10239
13 Ga0070671_100058296 3300005355 Bacteria 3214
14 Ga0070673_100002150 3300005364 Bacteria 11942
15 Ga0070667_100052666 3300005367 Bacteria 3435
16 Ga0070713_100005741 3300005436 Bacteria 8523
17 Ga0070713_100015986 3300005436 Bacteria 5632
18 Ga0070713_100048054 3300005436 Bacteria 3511
19 Ga0070713_100082367 3300005436 Bacteria 2747
20 Ga0070663_100004383 3300005455 Bacteria 8286
21 Ga0070678_100006857 3300005456 Bacteria 6713
22 Ga0070681_10001661 3300005458 Bacteria 19877
23 Ga0070681_10010376 3300005458 Bacteria 9198
24 Ga0070681_10040638 3300005458 Bacteria 4659
25 Ga0070681_10108928 3300005458 Bacteria 2710
26 Ga0070679_100000123 3300005530 Bacteria 61754
27 Ga0070679_100000457 3300005530 Bacteria 34625
28 Ga0070679_100009447 3300005530 Bacteria 9223
29 Ga0070679_100011833 3300005530 Bacteria 8323
30 Ga0070679_100025933 3300005530 Bacteria 5751
31 Ga0070684_100008212 3300005535 Bacteria 8155
32 Ga0070697_100001630 3300005536 Bacteria 17100
33 Ga0070697_100032030 3300005536 Bacteria 4229
34 Ga0068853_100000242 3300005539 Bacteria 38357
35 Ga0070665_100007285 3300005548 Bacteria 11248
36 Ga0070665_100011923 3300005548 Bacteria 8777
37 Ga0070665_100068171 3300005548 Bacteria 3567
38 Ga0070704_100072863 3300005549 Bacteria 2500
39 Ga0068855_100007175 3300005563 Bacteria 13522
40 Ga0068855_100007899 3300005563 Bacteria 12853
41 Ga0068855_100024998 3300005563 Bacteria 7149
42 Ga0068855_100031006 3300005563 Bacteria 6389
43 Ga0068855_100037067 3300005563 Bacteria 5801
44 Ga0068855_100059202 3300005563 Bacteria 4482
45 Ga0068855_100122788 3300005563 Bacteria 2971
46 Ga0068855_100131855 3300005563 Bacteria 2854
47 Ga0068857_100028190 3300005577 Bacteria 4954
48 Ga0068854_100000022 3300005578 Bacteria 127908
49 Ga0068856_100004961 3300005614 Bacteria 13174
50 Ga0068856_100016821 3300005614 Bacteria 7086
51 Ga0068856_100022388 3300005614 Bacteria 6143
52 Ga0068852_100000027 3300005616 Bacteria 113819
53 Ga0068852_100003207 3300005616 Bacteria 11424
54 Ga0068852_100021812 3300005616 Bacteria 5123
55 Ga0068852_100052494 3300005616 Bacteria 3504
56 Ga0068859_100050983 3300005617 Bacteria 4159
57 Ga0068863_100048696 3300005841 Bacteria 4018
58 Ga0068858_100063075 3300005842 Bacteria 3428
59 Ga0068860_100037015 3300005843 Bacteria 4671
60 Ga0081455_10032404 3300005937 Bacteria 4708
61 Ga0081540_1008591 3300005983 Bacteria 7117
62 Ga0070717_10000443 3300006028 Bacteria 26290
63 Ga0070717_10008727 3300006028 Bacteria 7582
64 Ga0070717_10052580 3300006028 Bacteria 3356
65 Ga0070716_100000188 3300006173 Bacteria 24323
66 Ga0070712_100029999 3300006175 Bacteria 3650
67 Ga0068871_100032557 3300006358 Bacteria 4120
68 Ga0075431_100020061 3300006847 Bacteria 6826
69 Ga0097620_100050982 3300006931 Bacteria 4159
70 Ga0105240_10000002 3300009093 Bacteria 1924170
71 Ga0105240_10000222 3300009093 Bacteria 113825
72 Ga0105240_10000690 3300009093 Bacteria 62106
73 Ga0105240_10001249 3300009093 Bacteria 44152
74 Ga0105240_10004521 3300009093 Bacteria 21133
75 Ga0105240_10007159 3300009093 Bacteria 16252
76 Ga0105240_10013688 3300009093 Bacteria 11121
77 Ga0105240_10020663 3300009093 Bacteria 8776
78 Ga0105240_10022686 3300009093 Bacteria 8317
79 Ga0111539_10004106 3300009094 Bacteria 19101
80 Ga0105245_10001361 3300009098 Bacteria 22123
81 Ga0105241_10000565 3300009174 Bacteria 27946
82 Ga0105241_10005884 3300009174 Bacteria 9053
83 Ga0105241_10052974 3300009174 Bacteria 3101
84 Ga0105248_10000006 3300009177 Bacteria 595060
85 Ga0105248_10001431 3300009177 Bacteria 26602
86 Ga0105248_10005154 3300009177 Bacteria 14406
87 Ga0105237_10041783 3300009545 Bacteria 4623
88 Ga0105238_10000479 3300009551 Bacteria 42002
89 Ga0105238_10000827 3300009551 Bacteria 32038
90 Ga0105238_10002604 3300009551 Bacteria 17984
91 Ga0105238_10018193 3300009551 Bacteria 7146
92 Ga0105238_10020733 3300009551 Bacteria 6693
93 Ga0105239_10003202 3300010375 Bacteria 20234
94 Ga0105239_10009843 3300010375 Bacteria 10740
95 Ga0105239_10091183 3300010375 Bacteria 3363
96 Ga0157370_10000012 3300013104 Bacteria 201181
97 Ga0157370_10003050 3300013104 Bacteria 19859
98 Ga0157369_10000112 3300013105 Bacteria 114309
99 Ga0157369_10003945 3300013105 Bacteria 17608
100 Ga0157369_10005040 3300013105 Bacteria 15460
101 Ga0157369_10020454 3300013105 Bacteria 7398
102 Ga0157369_10034386 3300013105 Bacteria 5562
103 Ga0157369_10059218 3300013105 Bacteria 4130
104 Ga0157369_10127785 3300013105 Bacteria 2694
105 Ga0157374_10001593 3300013296 Bacteria 19048
106 Ga0157374_10034219 3300013296 Bacteria 4639
107 Ga0157374_10198130 3300013296 Bacteria 1966
108 Ga0157378_10008291 3300013297 Bacteria 9057
109 Ga0157378_10050797 3300013297 Bacteria 3689
110 Ga0163162_10000056 3300013306 Bacteria 109321
111 Ga0157372_10000111 3300013307 Bacteria 86033
112 Ga0157372_10000876 3300013307 Bacteria 32700
113 Ga0157372_10007376 3300013307 Bacteria 11701
114 Ga0157372_10011022 3300013307 Bacteria 9622
115 Ga0157372_10064493 3300013307 Bacteria 4110
116 Ga0157372_10081475 3300013307 Bacteria 3663
117 Ga0157375_10012348 3300013308 Bacteria 7574
118 Ga0157375_10084083 3300013308 Bacteria 3230
119 Ga0163163_10010350 3300014325 Bacteria 8381
120 Ga0163163_10011274 3300014325 Bacteria 8102
121 Ga0163163_10023800 3300014325 Bacteria 5819
122 Ga0163163_10054643 3300014325 Bacteria 3946
123 Ga0163163_10118471 3300014325 Bacteria 2680
124 Ga0157376_10015653 3300014969 Bacteria 5735
125 Ga0213872_10000754 3300021361 Bacteria 23974
126 Ga0213875_10003058 3300021388 Bacteria 9675
127 Ga0228598_1000164 3300024227 Bacteria 11768
128 Ga0209233_1005444 3300025261 Bacteria 4223
129 Ga0207647_10013954 3300025904 Bacteria 5558
130 Ga0207645_10022446 3300025907 Bacteria 4105
131 Ga0207705_10000012 3300025909 Bacteria 472336
132 Ga0207705_10005472 3300025909 Bacteria 9498
133 Ga0207654_10029330 3300025911 Bacteria 3011
134 Ga0207654_10034762 3300025911 Bacteria 2802
135 Ga0207707_10003948 3300025912 Bacteria 13172
136 Ga0207707_10009300 3300025912 Bacteria 8522
137 Ga0207695_10000002 3300025913 Bacteria 2188391
138 Ga0207695_10000028 3300025913 Bacteria 551835
139 Ga0207695_10000814 3300025913 Bacteria 58050
140 Ga0207695_10000849 3300025913 Bacteria 56144
141 Ga0207695_10001035 3300025913 Bacteria 48857
142 Ga0207695_10001044 3300025913 Bacteria 48722
143 Ga0207695_10003390 3300025913 Bacteria 22512
144 Ga0207695_10007557 3300025913 Bacteria 13779
145 Ga0207695_10007745 3300025913 Bacteria 13607
146 Ga0207695_10092211 3300025913 Bacteria 3040
147 Ga0207671_10007733 3300025914 Bacteria 9259
148 Ga0207693_10011792 3300025915 Bacteria 7065
149 Ga0207660_10004865 3300025917 Bacteria 8744
150 Ga0207660_10005671 3300025917 Bacteria 8101
151 Ga0207652_10003094 3300025921 Bacteria 13868
152 Ga0207652_10004843 3300025921 Bacteria 10904
153 Ga0207652_10006934 3300025921 Bacteria 9128
154 Ga0207652_10010688 3300025921 Bacteria 7392
155 Ga0207694_10000209 3300025924 Bacteria 57282
156 Ga0207694_10004934 3300025924 Bacteria 10345
157 Ga0207694_10007565 3300025924 Bacteria 8235
158 Ga0207694_10008093 3300025924 Bacteria 7947
159 Ga0207700_10001353 3300025928 Bacteria 13894
160 Ga0207700_10009552 3300025928 Bacteria 6069
161 Ga0207700_10019593 3300025928 Bacteria 4571
162 Ga0207644_10003909 3300025931 Bacteria 9664
163 Ga0207690_10026457 3300025932 Bacteria 3653
164 Ga0207665_10000211 3300025939 Bacteria 39439
165 Ga0207665_10003097 3300025939 Bacteria 11157
166 Ga0207691_10067164 3300025940 Bacteria 3242
167 Ga0207711_10000064 3300025941 Bacteria 120779
168 Ga0207711_10002759 3300025941 Bacteria 15472
169 Ga0207711_10003123 3300025941 Bacteria 14436
170 Ga0207661_10005598 3300025944 Bacteria 8857
171 Ga0207661_10039851 3300025944 Bacteria 3690
172 Ga0207661_10090233 3300025944 Bacteria 2551
173 Ga0207667_10000163 3300025949 Bacteria 98321
174 Ga0207667_10001128 3300025949 Bacteria 33691
175 Ga0207667_10007887 3300025949 Bacteria 12712
176 Ga0207667_10009711 3300025949 Bacteria 11316
177 Ga0207667_10029816 3300025949 Bacteria 5910
178 Ga0207651_10014058 3300025960 Bacteria 4608
179 Ga0207640_10000030 3300025981 Bacteria 127918
180 Ga0207639_10000123 3300026041 Bacteria 57693
181 Ga0207678_10002725 3300026067 Bacteria 16015
182 Ga0207678_10016968 3300026067 Bacteria 6394
183 Ga0207678_10070326 3300026067 Bacteria 3001
184 Ga0207702_10006407 3300026078 Bacteria 10152
185 Ga0207702_10035011 3300026078 Bacteria 4199
186 Ga0207674_10002344 3300026116 Bacteria 23940
187 Ga0207674_10018550 3300026116 Bacteria 7558
188 Ga0207683_10000868 3300026121 Bacteria 27703
189 Ga0207698_10000021 3300026142 Bacteria 133280
190 Ga0207698_10000094 3300026142 Bacteria 57787
191 Ga0268266_10004719 3300028379 Bacteria 12964
192 Ga0268266_10030436 3300028379 Bacteria 4586
193 Ga0268266_10087867 3300028379 Bacteria 2720
194 Ga0265338_10006108 3300028800 Bacteria 15463
195 Ga0265338_10012523 3300028800 Bacteria 9664
196 Ga0265760_10000035 3300031090 Bacteria 46672
197 Ga0265330_10000761 3300031235 Bacteria 20237
198 Ga0265330_10001947 3300031235 Bacteria 11472
199 Ga0265328_10005592 3300031239 Bacteria 5375
200 Ga0265328_10005878 3300031239 Bacteria 5234
201 Ga0265325_10002013 3300031241 Bacteria 13957
202 Ga0265325_10013116 3300031241 Bacteria 4723
203 Ga0265325_10014231 3300031241 Bacteria 4502
204 Ga0265340_10000847 3300031247 Bacteria 17409
205 Ga0265340_10007400 3300031247 Bacteria 5962
206 Ga0265339_10000007 3300031249 Bacteria 241067
207 Ga0265339_10001824 3300031249 Bacteria 15634
208 Ga0265339_10001975 3300031249 Bacteria 15082
209 Ga0265316_10001159 3300031344 Bacteria 28527
210 Ga0265316_10001356 3300031344 Bacteria 26351
211 Ga0265316_10058248 3300031344 Bacteria 3010
212 Ga0265316_10074107 3300031344 Bacteria 2620
213 Ga0307408_100016244 3300031548 Bacteria 4965
214 Ga0307408_100051426 3300031548 Bacteria 2967
215 Ga0265313_10013811 3300031595 Bacteria 4814
216 Ga0265313_10022675 3300031595 Bacteria 3400
217 Ga0265313_10023606 3300031595 Bacteria 3309
218 Ga0265314_10000081 3300031711 Bacteria 143776
219 Ga0265314_10001671 3300031711 Bacteria 24165
220 Ga0265342_10002124 3300031712 Bacteria 17473
221 Ga0265342_10003751 3300031712 Bacteria 12277
222 Ga0265342_10017348 3300031712 Bacteria 4685
223 Ga0265342_10035245 3300031712 Bacteria 3065
224 Ga0307410_10002400 3300031852 Bacteria 9041
225 Ga0307410_10006445 3300031852 Bacteria 6335
226 Ga0307412_10008159 3300031911 Bacteria 5968
227 Ga0307412_10028393 3300031911 Bacteria 3499
228 Ga0307409_100006503 3300031995 Bacteria 6877
229 Ga0307409_100035472 3300031995 Bacteria 3655
230 Ga0307416_100017325 3300032002 Bacteria 5037
231 Ga0307416_100114782 3300032002 Bacteria 2383
232 Ga0307411_10013452 3300032005 Bacteria 4515
233 Ga0307510_10026654 3300033180 Bacteria 6638
234 Ga0307510_10084445 3300033180 Bacteria 3058
235 Ga0373955_0034901 3300035172 Bacteria 2660
236 Ga0373924_0000025 3300035410 Bacteria 38407
237 Ga0373935_0006681 3300035692 Bacteria 6895
238 Ga0373935_0052965 3300035692 Bacteria 2581
239 Ga0373933_0001619 3300035724 Bacteria 13140
240 Ga0373933_0019379 3300035724 Bacteria 3843
241 Ga0373937_0000001 3300036401 Bacteria 478903
242 Ga0373937_0000391 3300036401 Bacteria 40824
243 Ga0373937_0006451 3300036401 Bacteria 10125
244 Ga0373925_0019454 3300037068 Bacteria 4938
245 Ga0395899_0008483 3300037312 Bacteria 7917
246 Ga0395898_0086712 3300037466 Bacteria 3016
247 Ga0395905_0016046 3300037471 Bacteria 7120
248 Ga0395905_0022777 3300037471 Bacteria 5923
249 Ga0395905_0028901 3300037471 Bacteria 5226
250 Ga0395905_0045756 3300037471 Bacteria 4105
251 Ga0436364_0842240 3300037853 Bacteria 4100
252 Ga0436364_0873304 3300037853 Bacteria 3926
253 Ga0436364_1008949 3300037853 Bacteria 34505
254 Ga0395901_0052505 3300038443 Bacteria 4236
255 Ga0395901_0146896 3300038443 Bacteria 2478
256 Ga0436360_0677993 3300039438 Bacteria 42697
257 Ga0436360_1331585 3300039438 Bacteria 6804
258 Ga0436361_0211121 3300039447 Bacteria 13518
259 Ga0466963_0006229 3300044694 Bacteria 7045
260 Ga0451576_0002327 3300045051 Bacteria 28757
261 Ga0451576_0015429 3300045051 Bacteria 8463
262 Ga0466967_0001040 3300045976 Bacteria 15237
263 Ga0466967_0001660 3300045976 Bacteria 13190
264 Ga0466967_0014868 3300045976 Bacteria 6083
265 Ga0495603_0011651 3300046455 Bacteria 5321
266 Ga0495651_0005098 3300046462 Bacteria 10020
267 Ga0495651_0018461 3300046462 Bacteria 5401
268 Ga0495653_0051014 3300046463 Bacteria 3179
269 Ga0495650_0000022 3300046471 Bacteria 530747
270 Ga0495650_0011851 3300046471 Bacteria 4732
271 Ga0495580_0032898 3300046472 Bacteria 3737
272 Ga0495639_0007531 3300046475 Bacteria 4675
273 Ga0495662_0015520 3300046476 Bacteria 3696
274 Ga0495664_0013622 3300046477 Bacteria 4613
275 Ga0495594_0001889 3300046499 Bacteria 10904
276 Ga0495594_0002884 3300046499 Bacteria 8942
277 Ga0495594_0035012 3300046499 Bacteria 2734
278 Ga0495628_0027138 3300046516 Bacteria 4662
279 Ga0495630_0002961 3300046517 Bacteria 11793
280 Ga0495644_0000026 3300046523 Bacteria 70487
281 Ga0495652_0010810 3300046529 Bacteria 8272
282 Ga0495652_0026323 3300046529 Bacteria 5140
283 Ga0495640_0028733 3300046533 Bacteria 4000
284 Ga0495586_0004653 3300046535 Bacteria 7336
285 Ga0495587_0000116 3300046536 Bacteria 60612
286 Ga0495587_0033268 3300046536 Bacteria 3113
287 Ga0495645_0000724 3300046543 Bacteria 22631
288 Ga0495645_0004186 3300046543 Bacteria 9862
289 Ga0495633_0012892 3300046558 Bacteria 4425
290 Ga0495668_0023675 3300046616 Bacteria 3499
291 Ga0495634_0007390 3300046642 Bacteria 8267
292 Ga0495625_0000343 3300046660 Bacteria 71320
293 Ga0495625_0018706 3300046660 Bacteria 5397
294 Ga0495659_0008281 3300046664 Bacteria 3309
295 Ga0495661_0017497 3300046665 Bacteria 4732
296 Ga0495588_0031137 3300046674 Bacteria 2684
297 Ga0495599_0003913 3300046678 Bacteria 8767
298 Ga0495623_0004833 3300046679 Bacteria 8837
299 Ga0495646_0038259 3300046680 Bacteria 2963
300 Ga0495669_0014646 3300046684 Bacteria 3353
301 Ga0495613_0001540 3300046689 Bacteria 17532
302 Ga0495624_0003670 3300046690 Bacteria 11352
303 Ga0495600_0000713 3300046809 Bacteria 17462
304 Ga0495604_0010379 3300047317 Bacteria 7379
305 Ga0495604_0013379 3300047317 Bacteria 6534
306 Ga0495604_0025471 3300047317 Bacteria 4714
307 Ga0495680_0013710 3300047322 Bacteria 7056
308 Ga0495683_0002207 3300047323 Bacteria 11926
309 Ga0495687_027990 3300047443 Bacteria 2629
310 Ga0495675_0000319 3300047444 Bacteria 34255
311 Ga0495675_0005864 3300047444 Bacteria 7508
312 Ga0495686_0000009 3300047472 Bacteria 661643
313 Ga0495686_0005223 3300047472 Bacteria 10315
314 Ga0495686_0006703 3300047472 Bacteria 8760
315 Ga0495686_0009227 3300047472 Bacteria 7139
316 Ga0495602_0000237 3300048088 Bacteria 51444
317 Ga0495614_0008129 3300048089 Bacteria 4664
318 Ga0496100_0079246 3300048903 Bacteria 2213
319 Ga0496102_0071952 3300048905 Bacteria 3176
320 Ga0496104_0000019 3300048907 Bacteria 249440
321 Ga0496104_0065221 3300048907 Bacteria 3455
322 Ga0496105_0023310 3300048908 Bacteria 5018
323 Ga0496109_0028199 3300048912 Bacteria 5020
324 Ga0496110_0041320 3300048913 Bacteria 4023
325 Ga0496112_0018580 3300048915 Bacteria 6550
326 Ga0496112_0018988 3300048915 Bacteria 6481
327 Ga0496113_0002023 3300048916 Bacteria 11638
328 Ga0496113_0010275 3300048916 Bacteria 6185
329 Ga0496113_0030750 3300048916 Bacteria 3889
330 Ga0496115_0004856 3300048918 Bacteria 9754
331 Ga0496126_0000010 3300048929 Bacteria 744888
332 Ga0496126_0000012 3300048929 Bacteria 727789
333 Ga0496126_0000130 3300048929 Bacteria 173900
334 Ga0496126_0002446 3300048929 Bacteria 25072
335 Ga0496126_0004629 3300048929 Bacteria 16295
336 Ga0501047_0034765 3300049581 Bacteria 4866
337 Ga0501079_0057138 3300049741 Bacteria 3011
338 nmdc:mga08y16_90578_c1 3300050511 Bacteria 3188
339 nmdc:mga0n895_97822_c1 3300050512 Bacteria 2941
340 nmdc:mga0rr50_31835_c1 3300050513 Bacteria 3750
341 Ga0500651_0000003 3300053093 Bacteria 422045
342 Ga0500595_000005 3300053119 Bacteria 340896
343 2548697916 2547132424 Bacteria 8348532
344 2919054695 2919051321 Bacteria 4210889
345 2919715907 2919713450 Bacteria 7431245
346 2956939417 2956939328 Bacteria 3474458
347 3001122201 3001119090 Bacteria 3449530
348 Ga0495651_0019304
349 LJNas_1000333
350 Ga0065715_10004299
351 Ga0070658_10000151
352 Ga0070658_10006638
353 Ga0070658_10017065
354 Ga0070658_10025817
355 Ga0070683_100012119
356 Ga0070683_100018566
357 Ga0070680_100076602
358 Ga0070661_100044877
359 Ga0070671_100005346
360 Ga0070671_100058296
361 Ga0070673_100002150
362 Ga0070667_100052666
363 Ga0070713_100005741
364 Ga0070713_100015986
365 Ga0070713_100048054
366 Ga0070713_100082367
367 Ga0070663_100004383
368 Ga0070678_100006857
369 Ga0070681_10001661
370 Ga0070681_10010376
371 Ga0070681_10040638
372 Ga0070681_10108928
373 Ga0070679_100000123
374 Ga0070679_100000457
375 Ga0070679_100009447
376 Ga0070679_100011833
377 Ga0070679_100025933
378 Ga0070684_100008212
379 Ga0070697_100001630
380 Ga0070697_100032030
381 Ga0068853_100000242
382 Ga0070665_100007285
383 Ga0070665_100011923
384 Ga0070665_100068171
385 Ga0070704_100072863
386 Ga0068855_100007175
387 Ga0068855_100007899
388 Ga0068855_100024998
389 Ga0068855_100031006
390 Ga0068855_100037067
391 Ga0068855_100059202
392 Ga0068855_100122788
393 Ga0068855_100131855
394 Ga0068857_100028190
395 Ga0068854_100000022
396 Ga0068856_100004961
397 Ga0068856_100016821
398 Ga0068856_100022388
399 Ga0068852_100000027
400 Ga0068852_100003207
401 Ga0068852_100021812
402 Ga0068852_100052494
403 Ga0068859_100050983
404 Ga0068863_100048696
405 Ga0068858_100063075
406 Ga0068860_100037015
407 Ga0081455_10032404
408 Ga0081540_1008591
409 Ga0070717_10000443
410 Ga0070717_10008727
411 Ga0070717_10052580
412 Ga0070716_100000188
413 Ga0070712_100029999
414 Ga0068871_100032557
415 Ga0075431_100020061
416 Ga0097620_100050982
417 Ga0105240_10000002
418 Ga0105240_10000222
419 Ga0105240_10000690
420 Ga0105240_10001249
421 Ga0105240_10004521
422 Ga0105240_10007159
423 Ga0105240_10013688
424 Ga0105240_10020663
425 Ga0105240_10022686
426 Ga0111539_10004106
427 Ga0105245_10001361
428 Ga0105241_10000565
429 Ga0105241_10005884
430 Ga0105241_10052974
431 Ga0105248_10000006
432 Ga0105248_10001431
433 Ga0105248_10005154
434 Ga0105237_10041783
435 Ga0105238_10000479
436 Ga0105238_10000827
437 Ga0105238_10002604
438 Ga0105238_10018193
439 Ga0105238_10020733
440 Ga0105239_10003202
441 Ga0105239_10009843
442 Ga0105239_10091183
443 Ga0157370_10000012
444 Ga0157370_10003050
445 Ga0157369_10000112
446 Ga0157369_10003945
447 Ga0157369_10005040
448 Ga0157369_10020454
449 Ga0157369_10034386
450 Ga0157369_10059218
451 Ga0157369_10127785
452 Ga0157374_10001593
453 Ga0157374_10034219
454 Ga0157374_10198130
455 Ga0157378_10008291
456 Ga0157378_10050797
457 Ga0163162_10000056
458 Ga0157372_10000111
459 Ga0157372_10000876
460 Ga0157372_10007376
461 Ga0157372_10011022
462 Ga0157372_10064493
463 Ga0157372_10081475
464 Ga0157375_10012348
465 Ga0157375_10084083
466 Ga0163163_10010350
467 Ga0163163_10011274
468 Ga0163163_10023800
469 Ga0163163_10054643
470 Ga0163163_10118471
471 Ga0157376_10015653
472 Ga0213872_10000754
473 Ga0213875_10003058
474 Ga0228598_1000164
475 Ga0209233_1005444
476 Ga0207647_10013954
477 Ga0207645_10022446
478 Ga0207705_10000012
479 Ga0207705_10005472
480 Ga0207654_10029330
481 Ga0207654_10034762
482 Ga0207707_10003948
483 Ga0207707_10009300
484 Ga0207695_10000002
485 Ga0207695_10000028
486 Ga0207695_10000814
487 Ga0207695_10000849
488 Ga0207695_10001035
489 Ga0207695_10001044
490 Ga0207695_10003390
491 Ga0207695_10007557
492 Ga0207695_10007745
493 Ga0207695_10092211
494 Ga0207671_10007733
495 Ga0207693_10011792
496 Ga0207660_10004865
497 Ga0207660_10005671
498 Ga0207652_10003094
499 Ga0207652_10004843
500 Ga0207652_10006934
501 Ga0207652_10010688
502 Ga0207694_10000209
503 Ga0207694_10004934
504 Ga0207694_10007565
505 Ga0207694_10008093
506 Ga0207700_10001353
507 Ga0207700_10009552
508 Ga0207700_10019593
509 Ga0207644_10003909
510 Ga0207690_10026457
511 Ga0207665_10000211
512 Ga0207665_10003097
513 Ga0207691_10067164
514 Ga0207711_10000064
515 Ga0207711_10002759
516 Ga0207711_10003123
517 Ga0207661_10005598
518 Ga0207661_10039851
519 Ga0207661_10090233
520 Ga0207667_10000163
521 Ga0207667_10001128
522 Ga0207667_10007887
523 Ga0207667_10009711
524 Ga0207667_10029816
525 Ga0207651_10014058
526 Ga0207640_10000030
527 Ga0207639_10000123
528 Ga0207678_10002725
529 Ga0207678_10016968
530 Ga0207678_10070326
531 Ga0207702_10006407
532 Ga0207702_10035011
533 Ga0207674_10002344
534 Ga0207674_10018550
535 Ga0207683_10000868
536 Ga0207698_10000021
537 Ga0207698_10000094
538 Ga0268266_10004719
539 Ga0268266_10030436
540 Ga0268266_10087867
541 Ga0265338_10006108
542 Ga0265338_10012523
543 Ga0265760_10000035
544 Ga0265330_10000761
545 Ga0265330_10001947
546 Ga0265328_10005592
547 Ga0265328_10005878
548 Ga0265325_10002013
549 Ga0265325_10013116
550 Ga0265325_10014231
551 Ga0265340_10000847
552 Ga0265340_10007400
553 Ga0265339_10000007
554 Ga0265339_10001824
555 Ga0265339_10001975
556 Ga0265316_10001159
557 Ga0265316_10001356
558 Ga0265316_10058248
559 Ga0265316_10074107
560 Ga0307408_100016244
561 Ga0307408_100051426
562 Ga0265313_10013811
563 Ga0265313_10022675
564 Ga0265313_10023606
565 Ga0265314_10000081
566 Ga0265314_10001671
567 Ga0265342_10002124
568 Ga0265342_10003751
569 Ga0265342_10017348
570 Ga0265342_10035245
571 Ga0307410_10002400
572 Ga0307410_10006445
573 Ga0307412_10008159
574 Ga0307412_10028393
575 Ga0307409_100006503
576 Ga0307409_100035472
577 Ga0307416_100017325
578 Ga0307416_100114782
579 Ga0307411_10013452
580 Ga0307510_10026654
581 Ga0307510_10084445
582 Ga0373955_0034901
583 Ga0373924_0000025
584 Ga0373935_0006681
585 Ga0373935_0052965
586 Ga0373933_0001619
587 Ga0373933_0019379
588 Ga0373937_0000001
589 Ga0373937_0000391
590 Ga0373937_0006451
591 Ga0373925_0019454
592 Ga0395899_0008483
593 Ga0395898_0086712
594 Ga0395905_0016046
595 Ga0395905_0022777
596 Ga0395905_0028901
597 Ga0395905_0045756
598 Ga0436364_0842240
599 Ga0436364_0873304
600 Ga0436364_1008949
601 Ga0395901_0052505
602 Ga0395901_0146896
603 Ga0436360_0677993
604 Ga0436360_1331585
605 Ga0436361_0211121
606 Ga0466963_0006229
607 Ga0451576_0002327
608 Ga0451576_0015429
609 Ga0466967_0001040
610 Ga0466967_0001660
611 Ga0466967_0014868
612 Ga0495603_0011651
613 Ga0495651_0005098
614 Ga0495651_0018461
615 Ga0495653_0051014
616 Ga0495650_0000022
617 Ga0495650_0011851
618 Ga0495580_0032898
619 Ga0495639_0007531
620 Ga0495662_0015520
621 Ga0495664_0013622
622 Ga0495594_0001889
623 Ga0495594_0002884
624 Ga0495594_0035012
625 Ga0495628_0027138
626 Ga0495630_0002961
627 Ga0495644_0000026
628 Ga0495652_0010810
629 Ga0495652_0026323
630 Ga0495640_0028733
631 Ga0495586_0004653
632 Ga0495587_0000116
633 Ga0495587_0033268
634 Ga0495645_0000724
635 Ga0495645_0004186
636 Ga0495633_0012892
637 Ga0495668_0023675
638 Ga0495634_0007390
639 Ga0495625_0000343
640 Ga0495625_0018706
641 Ga0495659_0008281
642 Ga0495661_0017497
643 Ga0495588_0031137
644 Ga0495599_0003913
645 Ga0495623_0004833
646 Ga0495646_0038259
647 Ga0495669_0014646
648 Ga0495613_0001540
649 Ga0495624_0003670
650 Ga0495600_0000713
651 Ga0495604_0010379
652 Ga0495604_0013379
653 Ga0495604_0025471
654 Ga0495680_0013710
655 Ga0495683_0002207
656 Ga0495687_027990
657 Ga0495675_0000319
658 Ga0495675_0005864
659 Ga0495686_0000009
660 Ga0495686_0005223
661 Ga0495686_0006703
662 Ga0495686_0009227
663 Ga0495602_0000237
664 Ga0495614_0008129
665 Ga0496100_0079246
666 Ga0496102_0071952
667 Ga0496104_0000019
668 Ga0496104_0065221
669 Ga0496105_0023310
670 Ga0496109_0028199
671 Ga0496110_0041320
672 Ga0496112_0018580
673 Ga0496112_0018988
674 Ga0496113_0002023
675 Ga0496113_0010275
676 Ga0496113_0030750
677 Ga0496115_0004856
678 Ga0496126_0000010
679 Ga0496126_0000012
680 Ga0496126_0000130
681 Ga0496126_0002446
682 Ga0496126_0004629
683 Ga0501047_0034765
684 Ga0501079_0057138
685 nmdc:mga08y16_90578_c1
686 nmdc:mga0n895_97822_c1
687 nmdc:mga0rr50_31835_c1
688 Ga0500651_0000003
689 Ga0500595_000005
690 2548697916
691 2919054695
692 2919715907
693 2956939417
694 3001122201

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19833

RecG_dom3_C

ATP-dependent DNA helicase RecG, domain 3, C-terminal

781

861

0.94

PF17191

RecG_wedge

RecG wedge domain

4

81

0.91

PF00271

Helicase_C

Helicase conserved C-terminal domain

664

754

0.89

PF04851

ResIII

Type III restriction enzyme, res subunit

349

524

0.74

PF00270

DEAD

DEAD/DEAH box helicase

353

530

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m6b-assembly1.cif.gz_M cryo-em structure of thermus thermophilus mfd in complex with rna polymerase and atp-gamma-s 0.8198 232 697
6xeo-assembly1.cif.gz_A structure of mfd bound to dsdna 0.8135 207 701
1q8i-assembly1.cif.gz_A crystal structure of escherichia coli dna polymerase ii 0.8107 62 94
7ssg-assembly1.cif.gz_A mfd dna complex 0.8106 252 665
3k5o-assembly1.cif.gz_A crystal structure of e.coli pol ii 0.8031 62 94
ID Description Score Start End Superfamily
af_P24230_208_450_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9216 213 455 3.40.50.300
af_P24230_208_450_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.918 213 455 3.40.50.300
af_O50581_448_620_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9144 462 664 3.40.50.300
af_A0A0P0VNY0_1_181_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9135 306 461 3.40.50.300
af_A0A1D6HHW2_464_714_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9111 259 453 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A5S3VVF0-F1-model_v4 ATP-dependent DNA helicase RecG 0.9467 303 419 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-A0A4U9D4B1-F1-model_v4 ATP-dependent DNA helicase recG (EC 3.6.4.12) 0.9416 282 436 GO:0003677
GO:0005524
GO:0006281
GO:0009378
GO:0016787
GO:0036121
GO:0061749
GO:1990518
AF-A0A0F9GWJ7-F1-model_v4 ATP-dependent DNA helicase RecG 0.9401 184 732 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0016787
AF-A0A660RP35-F1-model_v4 ATP-dependent DNA helicase RecG (EC 5.6.2.4) 0.9377 4 734 GO:0003677
GO:0003689
GO:0005524
GO:0006281
GO:0006310
GO:0009378
GO:0016887
GO:0036121
GO:0061749
GO:0061775
GO:0140584
GO:0140665
GO:0140849
GO:1990518
AF-A0A7X8EPE5-F1-model_v4 ATP-dependent DNA helicase RecG (EC 5.6.2.4) 0.9368 2 724 GO:0003677
GO:0003678
GO:0005524
GO:0006281
GO:0006310
GO:0016787

Map