F417399

General Info

Members Datasets Scaffolds Average Seq Length
348 234 696 169

Family's Representative Sequence

Representative Sequence 3300005330|Ga0070690_100575150|Ga0070690_1005751501
Length 188
Sequence MGKSHRRMEREVTAAQIDRAQGSIHSARGVVFIHSAPRALSPHVEWAAGRALGRAVNFDWRDQPVLPGAQRTEYYWEGPRGTGAALASALRGWEHLRYEVTEDASPQSDGGRWMHTPDLGIFFAQTDTVGNLVIPEDRIRFAMESAGSDAFELHRELRLALGQAWDDELESFRHASEDSPVVWLHKVG

Samples

Sample ID Description Type Environment
1 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
7 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
8 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
54 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
70 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
113 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
116 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
117 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
120 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
121 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
122 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
123 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
126 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
127 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
128 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
129 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
130 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
131 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
132 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
133 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
134 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
135 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
138 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
139 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
140 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
141 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
145 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
146 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
147 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
150 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
151 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
154 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
155 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
167 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
168 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
169 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
170 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
171 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
172 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
178 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
179 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
180 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
181 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
182 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
183 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
187 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
189 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
193 2643221549 Agromyces sp. Root1464 Isolate Unclassified
194 2643221572 Leifsonia sp. Root60 Isolate Unclassified
195 2643221616 Leifsonia sp. Root227 Isolate Unclassified
196 2643221619 Agromyces sp. Root81 Isolate Unclassified
197 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
198 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
199 2643221649 Leifsonia sp. Root4 Isolate Unclassified
200 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
201 2643221721 Oerskovia sp. Root918 Isolate Unclassified
202 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
203 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
204 2808606372 Agromyces sp. 23-23 Isolate Unclassified
205 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
206 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
207 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
208 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
209 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
210 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
211 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
212 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
213 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
214 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
215 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
216 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
217 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
218 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
219 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
220 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
221 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
222 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
223 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
224 2928153084 Leifsonia sp. 563 Isolate Unclassified
225 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
226 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
227 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
228 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
229 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
230 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
231 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
232 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
233 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
234 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.34
Metatranscriptomes 2.3
Isolates 12.36

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 16.38
Nodule 0
Rhizoplane 4.02
Rhizosphere 64.94
Stem 0
Stem Tuber 0.29
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100575150 3300005330 Bacteria 852
2 JGI24735J21928_10012475 3300002067 Bacteria 2685
3 JGI25164J39214_1001094 3300002772 Bacteria 7828
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 Ga0006562J51391_1027042 3300003578 Bacteria 5512
6 Ga0055539_1000008 3300003752 Bacteria 537665
7 Ga0055533_1000001 3300003756 Bacteria 1863437
8 Ga0055525_1000221 3300003759 Bacteria 62301
9 Ga0055542_1016291 3300003762 Bacteria 1174
10 Ga0055529_1000065 3300003763 Bacteria 173112
11 Ga0070658_10155081 3300005327 Bacteria 1919
12 Ga0070658_10222704 3300005327 Bacteria 1596
13 Ga0070661_100035779 3300005344 Bacteria 3608
14 Ga0070675_100265877 3300005354 Bacteria 1504
15 Ga0070671_100273090 3300005355 Bacteria 1437
16 Ga0070659_100001568 3300005366 Bacteria 16463
17 Ga0070667_100066194 3300005367 Bacteria 3069
18 Ga0070710_10680206 3300005437 Bacteria 724
19 Ga0070663_101708403 3300005455 Bacteria 563
20 Ga0070685_10083480 3300005466 Bacteria 1919
21 Ga0070684_100753263 3300005535 Bacteria 909
22 Ga0068853_100032977 3300005539 Bacteria 4390
23 Ga0068853_100326689 3300005539 Bacteria 1423
24 Ga0068853_100417897 3300005539 Bacteria 1257
25 Ga0070672_100033639 3300005543 Bacteria 3884
26 Ga0070665_101039487 3300005548 Bacteria 831
27 Ga0068855_100290713 3300005563 Bacteria 1812
28 Ga0068855_100428173 3300005563 Bacteria 1447
29 Ga0068857_100004851 3300005577 Bacteria 11403
30 Ga0068856_100130987 3300005614 Bacteria 2512
31 Ga0068856_100210071 3300005614 Bacteria 1962
32 Ga0068856_101031805 3300005614 Bacteria 840
33 Ga0070702_100556903 3300005615 Bacteria 852
34 Ga0068852_100008003 3300005616 Bacteria 7750
35 Ga0068852_100008759 3300005616 Bacteria 7483
36 Ga0068852_100069332 3300005616 Bacteria 3090
37 Ga0068864_100530780 3300005618 Bacteria 1135
38 Ga0068861_100090677 3300005719 Bacteria 2412
39 Ga0068851_10000003 3300005834 Bacteria 293018
40 Ga0068860_100444624 3300005843 Bacteria 1288
41 Ga0075365_10203791 3300006038 Bacteria 1386
42 Ga0075365_10298933 3300006038 Bacteria 1133
43 Ga0075365_10337048 3300006038 Bacteria 1062
44 Ga0075365_10995731 3300006038 Bacteria 591
45 Ga0075364_10189682 3300006051 Bacteria 1392
46 Ga0075369_10135877 3300006186 Bacteria 1119
47 Ga0075369_10202092 3300006186 Bacteria 917
48 Ga0075370_10302717 3300006353 Bacteria 951
49 Ga0075370_10405390 3300006353 Bacteria 818
50 Ga0105240_10001674 3300009093 Bacteria 37626
51 Ga0105240_10143225 3300009093 Bacteria 2856
52 Ga0105240_11754371 3300009093 Bacteria 647
53 Ga0111539_10317890 3300009094 Bacteria 1812
54 Ga0105245_10073229 3300009098 Bacteria 3114
55 Ga0105245_10405736 3300009098 Bacteria 1363
56 Ga0105247_10174406 3300009101 Bacteria 1431
57 Ga0105247_10326806 3300009101 Bacteria 1072
58 Ga0105243_10030944 3300009148 Bacteria 4124
59 Ga0105241_10000670 3300009174 Bacteria 25806
60 Ga0105237_10009880 3300009545 Bacteria 10194
61 Ga0105237_10031067 3300009545 Bacteria 5418
62 Ga0105238_10003197 3300009551 Bacteria 16352
63 Ga0105239_10419960 3300010375 Bacteria 1515
64 Ga0105246_10094291 3300011119 Bacteria 2164
65 Ga0157371_10001820 3300013102 Bacteria 21485
66 Ga0157370_10583871 3300013104 Bacteria 1024
67 Ga0157369_10822566 3300013105 Bacteria 954
68 Ga0157372_10109187 3300013307 Bacteria 3168
69 Ga0157380_10009134 3300014326 Bacteria 7089
70 Ga0197907_10504249 3300020069 Bacteria 702
71 Ga0206351_10208762 3300020077 Bacteria 678
72 Ga0206350_10963145 3300020080 Bacteria 1304
73 Ga0206354_11673819 3300020081 Bacteria 2176
74 Ga0206353_10586218 3300020082 Bacteria 6002
75 Ga0206353_11579696 3300020082 Bacteria 770
76 Ga0224712_10391998 3300022467 Bacteria 661
77 Ga0209566_100455 3300025225 Bacteria 30192
78 Ga0209674_100001 3300025226 Bacteria 4013750
79 Ga0209672_100006 3300025228 Bacteria 1004497
80 Ga0209147_100505 3300025229 Bacteria 22687
81 Ga0209563_100001 3300025230 Bacteria 4013775
82 Ga0209563_100220 3300025230 Bacteria 28430
83 Ga0207427_100052 3300025231 Bacteria 218228
84 Ga0209437_100816 3300025233 Bacteria 13979
85 Ga0209258_103542 3300025242 Bacteria 3322
86 Ga0209646_1029599 3300025246 Bacteria 742
87 Ga0209677_100001 3300025253 Bacteria 4013787
88 Ga0209677_102125 3300025253 Bacteria 7774
89 Ga0209148_1000015 3300025254 Bacteria 850103
90 Ga0209148_1003486 3300025254 Bacteria 4322
91 Ga0209233_1000001 3300025261 Bacteria 2992747
92 Ga0209455_1000013 3300025272 Bacteria 850103
93 Ga0209455_1009800 3300025272 Bacteria 2485
94 Ga0209051_1069153 3300025303 Bacteria 1071
95 Ga0207656_10000002 3300025321 Bacteria 792178
96 Ga0207710_10126578 3300025900 Bacteria 1224
97 Ga0207688_10132300 3300025901 Bacteria 1463
98 Ga0207647_10047913 3300025904 Bacteria 2656
99 Ga0207643_10096037 3300025908 Bacteria 1733
100 Ga0207705_10036676 3300025909 Bacteria 3508
101 Ga0207654_10000001 3300025911 Bacteria 1816198
102 Ga0207695_10002367 3300025913 Bacteria 28011
103 Ga0207695_10049459 3300025913 Bacteria 4431
104 Ga0207671_10000002 3300025914 Bacteria 1144816
105 Ga0207657_10008307 3300025919 Bacteria 10562
106 Ga0207694_10000092 3300025924 Bacteria 100605
107 Ga0207659_10328509 3300025926 Bacteria 1263
108 Ga0207687_10155360 3300025927 Bacteria 1750
109 Ga0207687_10277595 3300025927 Bacteria 1342
110 Ga0207700_10956998 3300025928 Bacteria 766
111 Ga0207644_10462501 3300025931 Bacteria 1043
112 Ga0207690_10000972 3300025932 Bacteria 18349
113 Ga0207709_10142265 3300025935 Bacteria 1650
114 Ga0207691_10148815 3300025940 Bacteria 2060
115 Ga0207711_10000354 3300025941 Bacteria 48744
116 Ga0207689_10264800 3300025942 Bacteria 1422
117 Ga0207667_10005363 3300025949 Bacteria 15633
118 Ga0207667_10006093 3300025949 Bacteria 14658
119 Ga0207667_10007363 3300025949 Bacteria 13242
120 Ga0207667_11241338 3300025949 Bacteria 723
121 Ga0207651_10384834 3300025960 Bacteria 1190
122 Ga0207640_10487822 3300025981 Bacteria 1023
123 Ga0207658_10004577 3300025986 Bacteria 9598
124 Ga0207703_10000315 3300026035 Bacteria 52633
125 Ga0207639_10011048 3300026041 Bacteria 6262
126 Ga0207639_10074890 3300026041 Bacteria 2660
127 Ga0207639_10111779 3300026041 Bacteria 2228
128 Ga0207678_10056414 3300026067 Bacteria 3381
129 Ga0207678_10222385 3300026067 Bacteria 1616
130 Ga0207702_10078023 3300026078 Bacteria 2866
131 Ga0207702_10142879 3300026078 Bacteria 2168
132 Ga0207702_10286872 3300026078 Bacteria 1558
133 Ga0207702_10325957 3300026078 Bacteria 1464
134 Ga0207702_11448954 3300026078 Bacteria 680
135 Ga0207676_10569514 3300026095 Bacteria 1084
136 Ga0207674_10013255 3300026116 Bacteria 9159
137 Ga0207675_100162108 3300026118 Bacteria 2133
138 Ga0207698_10000255 3300026142 Bacteria 32639
139 Ga0207698_10003348 3300026142 Bacteria 9650
140 Ga0207698_10038510 3300026142 Bacteria 3533
141 Ga0207428_10388465 3300027907 Bacteria 1023
142 Ga0268266_10749586 3300028379 Bacteria 942
143 Ga0307513_10571216 3300031456 Bacteria 842
144 Ga0307408_100469910 3300031548 Bacteria 1095
145 Ga0307514_10006904 3300031649 Bacteria 9831
146 Ga0307514_10106074 3300031649 Bacteria 2005
147 Ga0307413_10746744 3300031824 Bacteria 817
148 Ga0307518_10085899 3300031838 Bacteria 2268
149 Ga0307410_10362481 3300031852 Bacteria 1161
150 Ga0307406_10014583 3300031901 Bacteria 4525
151 Ga0307406_10492120 3300031901 Bacteria 993
152 Ga0307412_10381215 3300031911 Bacteria 1142
153 Ga0307412_11022193 3300031911 Bacteria 731
154 Ga0307409_100238469 3300031995 Bacteria 1654
155 Ga0307409_100399757 3300031995 Bacteria 1312
156 Ga0307409_100442609 3300031995 Bacteria 1252
157 Ga0307409_101501487 3300031995 Bacteria 701
158 Ga0307416_100178772 3300032002 Bacteria 1986
159 Ga0307416_102107960 3300032002 Bacteria 666
160 Ga0307414_10452736 3300032004 Bacteria 1126
161 Ga0307414_10590564 3300032004 Bacteria 995
162 Ga0307414_10671180 3300032004 Bacteria 936
163 Ga0307411_10396658 3300032005 Bacteria 1139
164 Ga0307411_10810877 3300032005 Bacteria 825
165 Ga0395900_0126976 3300037418 Bacteria 2616
166 Ga0451789_0909460 3300041443 Bacteria 1728
167 Ga0451791_0624250 3300041451 Bacteria 1655
168 Ga0451793_0019243 3300041452 Bacteria 923
169 Ga0451807_1375408 3300041486 Bacteria 798
170 Ga0451853_2064150 3300041512 Bacteria 691
171 Ga0466972_0060151 3300044658 Bacteria 1823
172 Ga0466972_0323255 3300044658 Bacteria 721
173 Ga0466965_0024195 3300044683 Bacteria 2936
174 Ga0466965_0062113 3300044683 Bacteria 1868
175 Ga0466965_0148314 3300044683 Bacteria 1225
176 Ga0466965_0167173 3300044683 Bacteria 1155
177 Ga0466965_0334832 3300044683 Bacteria 826
178 Ga0466966_0085729 3300044684 Bacteria 1958
179 Ga0466966_0179980 3300044684 Bacteria 1283
180 Ga0466961_0099107 3300044693 Bacteria 1837
181 Ga0466961_0267660 3300044693 Bacteria 1047
182 Ga0466961_0747990 3300044693 Bacteria 584
183 Ga0466963_0471686 3300044694 Bacteria 886
184 Ga0466970_0055494 3300044765 Bacteria 2115
185 Ga0466970_0078190 3300044765 Bacteria 1784
186 Ga0466970_0093965 3300044765 Bacteria 1629
187 Ga0466970_0147940 3300044765 Bacteria 1296
188 Ga0466970_0374817 3300044765 Bacteria 810
189 Ga0466970_0655739 3300044765 Bacteria 610
190 Ga0466957_0160278 3300044842 Bacteria 1461
191 Ga0466957_0658222 3300044842 Bacteria 737
192 Ga0466960_0036661 3300044901 Bacteria 2297
193 Ga0466960_0037993 3300044901 Bacteria 2261
194 Ga0466959_0797723 3300045049 Bacteria 631
195 Ga0466958_0257921 3300045836 Bacteria 1116
196 Ga0466958_0400309 3300045836 Bacteria 886
197 Ga0495590_0000848 3300046457 Bacteria 13824
198 Ga0495638_0283395 3300046460 Bacteria 899
199 Ga0495633_0365537 3300046558 Bacteria 653
200 Ga0495672_0015065 3300047320 Bacteria 5262
201 Ga0495672_0050751 3300047320 Bacteria 2447
202 Ga0495686_0119948 3300047472 Bacteria 1569
203 Ga0495686_0368095 3300047472 Bacteria 778
204 Ga0496101_0022285 3300048904 Bacteria 4359
205 Ga0496102_0504995 3300048905 Bacteria 1131
206 Ga0496102_1009690 3300048905 Bacteria 752
207 Ga0496103_0037021 3300048906 Bacteria 2990
208 Ga0496104_0009242 3300048907 Bacteria 8765
209 Ga0496107_0662830 3300048910 Bacteria 769
210 Ga0496113_0116609 3300048916 Bacteria 2084
211 Ga0496114_0091376 3300048917 Bacteria 2585
212 Ga0496114_0112785 3300048917 Bacteria 2330
213 Ga0496115_0141169 3300048918 Bacteria 1987
214 Ga0496117_0000235 3300048920 Bacteria 104830
215 Ga0496117_0004371 3300048920 Bacteria 15671
216 Ga0496118_0000601 3300048921 Bacteria 59471
217 Ga0496118_0021202 3300048921 Bacteria 5729
218 Ga0496119_0003731 3300048922 Bacteria 15600
219 Ga0496119_0032933 3300048922 Bacteria 3447
220 Ga0496120_0005582 3300048923 Bacteria 9986
221 Ga0496120_0022334 3300048923 Bacteria 3982
222 Ga0496120_0273187 3300048923 Bacteria 784
223 Ga0496120_0323434 3300048923 Bacteria 700
224 Ga0496121_0121328 3300048924 Bacteria 1974
225 Ga0496122_0006733 3300048925 Bacteria 13080
226 Ga0496122_0024839 3300048925 Bacteria 5231
227 Ga0496123_0004086 3300048926 Bacteria 15707
228 Ga0496123_0008629 3300048926 Bacteria 9322
229 Ga0496124_0002211 3300048927 Bacteria 25901
230 Ga0496124_0127658 3300048927 Bacteria 2024
231 Ga0496125_0128302 3300048928 Bacteria 1792
232 Ga0496125_0134555 3300048928 Bacteria 1732
233 Ga0496125_0498028 3300048928 Bacteria 686
234 Ga0496126_0176059 3300048929 Bacteria 1819
235 Ga0496126_0207584 3300048929 Bacteria 1651
236 Ga0496126_0210244 3300048929 Bacteria 1638
237 Ga0496126_0855701 3300048929 Bacteria 693
238 Ga0501032_0014897 3300049569 Bacteria 5503
239 Ga0501034_0031357 3300049571 Bacteria 5399
240 Ga0501034_0055291 3300049571 Bacteria 3994
241 Ga0501034_0061453 3300049571 Bacteria 3772
242 Ga0501034_0115073 3300049571 Bacteria 2678
243 Ga0501034_0176515 3300049571 Bacteria 2102
244 Ga0501034_0203398 3300049571 Bacteria 1937
245 Ga0501034_0228027 3300049571 Bacteria 1813
246 Ga0501034_0444185 3300049571 Bacteria 1215
247 Ga0501034_0453343 3300049571 Bacteria 1200
248 Ga0501036_0358670 3300049572 Bacteria 1217
249 Ga0501037_0045466 3300049573 Bacteria 3223
250 Ga0501037_0054477 3300049573 Bacteria 2925
251 Ga0501038_0063622 3300049574 Bacteria 3148
252 Ga0501038_0152005 3300049574 Bacteria 1887
253 Ga0501043_0001520 3300049579 Bacteria 20261
254 Ga0501046_0620550 3300049580 Bacteria 766
255 Ga0501047_0003895 3300049581 Bacteria 14029
256 Ga0501047_0014376 3300049581 Bacteria 7526
257 Ga0501067_0025559 3300049583 Bacteria 3273
258 Ga0501068_0218457 3300049584 Bacteria 1211
259 Ga0501070_0000088 3300049586 Bacteria 77423
260 Ga0501070_0008879 3300049586 Bacteria 8495
261 Ga0501070_0162738 3300049586 Bacteria 1839
262 Ga0501070_0167403 3300049586 Bacteria 1811
263 Ga0501070_1277001 3300049586 Bacteria 561
264 Ga0501071_0024351 3300049587 Bacteria 4233
265 Ga0501073_0000075 3300049589 Bacteria 61808
266 Ga0501073_0024474 3300049589 Bacteria 4336
267 Ga0501073_0156706 3300049589 Bacteria 1578
268 Ga0501074_0050621 3300049590 Bacteria 2999
269 Ga0501074_0246732 3300049590 Bacteria 1270
270 Ga0501074_0393684 3300049590 Bacteria 983
271 Ga0501080_0000271 3300049742 Bacteria 39284
272 Ga0501080_0549547 3300049742 Bacteria 1029
273 Ga0501083_0030070 3300049744 Bacteria 3732
274 Ga0501083_0862135 3300049744 Bacteria 589
275 Ga0501044_0017210 3300049823 Bacteria 7754
276 Ga0501044_0128481 3300049823 Bacteria 2530
277 Ga0501044_0140106 3300049823 Bacteria 2408
278 nmdc:mga00v17_209878_c1 3300050491 Bacteria 1260
279 nmdc:mga00v17_437464_c1 3300050491 Bacteria 849
280 nmdc:mga0yw44_527352_c1 3300050492 Bacteria 802
281 nmdc:mga0yw44_78468_c1 3300050492 Bacteria 2065
282 nmdc:mga08y16_677469_c1 3300050511 Bacteria 1033
283 nmdc:mga0sz30_129729_c1 3300050516 Bacteria 1110
284 Ga0500651_0000791 3300053093 Bacteria 15456
285 Ga0500650_0100482 3300053098 Bacteria 1353
286 Ga0500556_0287061 3300053104 Bacteria 644
287 Ga0500562_000419 3300053108 Bacteria 10335
288 Ga0500593_038145 3300053117 Bacteria 2150
289 Ga0500655_030847 3300053133 Bacteria 1032
290 Ga0500559_0000765 3300053136 Bacteria 21074
291 Ga0500559_0023234 3300053136 Bacteria 2632
292 Ga0500559_0053844 3300053136 Bacteria 1782
293 Ga0500568_0000172 3300053139 Bacteria 56463
294 Ga0500568_0009909 3300053139 Bacteria 4499
295 Ga0500573_0000013 3300053140 Bacteria 196637
296 Ga0500573_0057308 3300053140 Bacteria 2235
297 Ga0500573_0117030 3300053140 Bacteria 1487
298 Ga0500573_0133968 3300053140 Bacteria 1370
299 Ga0500573_0200407 3300053140 Bacteria 1060
300 Ga0500577_0011140 3300053142 Bacteria 2672
301 Ga0500616_0001005 3300053153 Bacteria 30333
302 Ga0500620_015853 3300053155 Bacteria 2140
303 Ga0501084_1421396 3300054114 Bacteria 581
304 Ga0466962_0155381 3300061719 Bacteria 1111
305 Ga0466962_0312322 3300061719 Bacteria 779
306 2587862628 2585428094 Bacteria 3604039
307 2643767542 2643221549 Bacteria 4042819
308 2643875395 2643221572 Bacteria 3614809
309 2644095991 2643221616 Bacteria 4066575
310 2644110816 2643221619 Bacteria 4158469
311 2644183325 2643221632 Bacteria 3406696
312 2644199147 2643221635 Bacteria 2632343
313 2644279509 2643221649 Bacteria 3867359
314 2644382450 2643221669 Bacteria 3611286
315 2644666060 2643221721 Bacteria 4486924
316 2723642189 2721755702 Bacteria 4373124
317 2753301749 2751185788 Bacteria 4541048
318 2808902267 2808606372 Bacteria 4649509
319 2844842398 2844841374 Bacteria 3917147
320 2848552557 2848551377 Bacteria 3720646
321 2852645640 2852643534 Bacteria 3013378
322 2852679169 2852677369 Bacteria 3768884
323 2857735827 2857733635 Bacteria 3532004
324 2857738053 2857737099 Bacteria 3104305
325 2862996035 2862993130 Bacteria 3860849
326 2884765351 2884763398 Bacteria 4091164
327 2895661487 2895660088 Bacteria 3782833
328 2897563226 2897561785 Bacteria 3256946
329 2904502777 2904501621 Bacteria 3401437
330 2908677540 2908674828 Bacteria 3382763
331 2909075108 2909074476 Bacteria 3436050
332 2919043692 2919042368 Bacteria 3905917
333 2919058047 2919055335 Bacteria 3875751
334 2919446051 2919443155 Bacteria 4072969
335 2919524440 2919523602 Bacteria 3788128
336 2928106534 2928104781 Bacteria 3877447
337 2928123201 2928121344 Bacteria 3972376
338 2928155938 2928153084 Bacteria 4020257
339 2928501650 2928500415 Bacteria 3384541
340 2935411558 2935409751 Bacteria 4179611
341 2935891792 2935890801 Bacteria 4593001
342 2964329515 2964326757 Bacteria 3290868
343 2966922306 2966921586 Bacteria 3092803
344 2966924995 2966924647 Bacteria 3268643
345 2984553912 2984551494 Bacteria 3877562
346 8046356259 8046352972 Bacteria 3613806
347 8056039494 8056037122 Bacteria 3854319
348 8057348858 8057345674 Bacteria 4160394
349 Ga0070690_100575150
350 JGI24735J21928_10012475
351 JGI25164J39214_1001094
352 JGI25165J46597_1000002
353 Ga0006562J51391_1027042
354 Ga0055539_1000008
355 Ga0055533_1000001
356 Ga0055525_1000221
357 Ga0055542_1016291
358 Ga0055529_1000065
359 Ga0070658_10155081
360 Ga0070658_10222704
361 Ga0070661_100035779
362 Ga0070675_100265877
363 Ga0070671_100273090
364 Ga0070659_100001568
365 Ga0070667_100066194
366 Ga0070710_10680206
367 Ga0070663_101708403
368 Ga0070685_10083480
369 Ga0070684_100753263
370 Ga0068853_100032977
371 Ga0068853_100326689
372 Ga0068853_100417897
373 Ga0070672_100033639
374 Ga0070665_101039487
375 Ga0068855_100290713
376 Ga0068855_100428173
377 Ga0068857_100004851
378 Ga0068856_100130987
379 Ga0068856_100210071
380 Ga0068856_101031805
381 Ga0070702_100556903
382 Ga0068852_100008003
383 Ga0068852_100008759
384 Ga0068852_100069332
385 Ga0068864_100530780
386 Ga0068861_100090677
387 Ga0068851_10000003
388 Ga0068860_100444624
389 Ga0075365_10203791
390 Ga0075365_10298933
391 Ga0075365_10337048
392 Ga0075365_10995731
393 Ga0075364_10189682
394 Ga0075369_10135877
395 Ga0075369_10202092
396 Ga0075370_10302717
397 Ga0075370_10405390
398 Ga0105240_10001674
399 Ga0105240_10143225
400 Ga0105240_11754371
401 Ga0111539_10317890
402 Ga0105245_10073229
403 Ga0105245_10405736
404 Ga0105247_10174406
405 Ga0105247_10326806
406 Ga0105243_10030944
407 Ga0105241_10000670
408 Ga0105237_10009880
409 Ga0105237_10031067
410 Ga0105238_10003197
411 Ga0105239_10419960
412 Ga0105246_10094291
413 Ga0157371_10001820
414 Ga0157370_10583871
415 Ga0157369_10822566
416 Ga0157372_10109187
417 Ga0157380_10009134
418 Ga0197907_10504249
419 Ga0206351_10208762
420 Ga0206350_10963145
421 Ga0206354_11673819
422 Ga0206353_10586218
423 Ga0206353_11579696
424 Ga0224712_10391998
425 Ga0209566_100455
426 Ga0209674_100001
427 Ga0209672_100006
428 Ga0209147_100505
429 Ga0209563_100001
430 Ga0209563_100220
431 Ga0207427_100052
432 Ga0209437_100816
433 Ga0209258_103542
434 Ga0209646_1029599
435 Ga0209677_100001
436 Ga0209677_102125
437 Ga0209148_1000015
438 Ga0209148_1003486
439 Ga0209233_1000001
440 Ga0209455_1000013
441 Ga0209455_1009800
442 Ga0209051_1069153
443 Ga0207656_10000002
444 Ga0207710_10126578
445 Ga0207688_10132300
446 Ga0207647_10047913
447 Ga0207643_10096037
448 Ga0207705_10036676
449 Ga0207654_10000001
450 Ga0207695_10002367
451 Ga0207695_10049459
452 Ga0207671_10000002
453 Ga0207657_10008307
454 Ga0207694_10000092
455 Ga0207659_10328509
456 Ga0207687_10155360
457 Ga0207687_10277595
458 Ga0207700_10956998
459 Ga0207644_10462501
460 Ga0207690_10000972
461 Ga0207709_10142265
462 Ga0207691_10148815
463 Ga0207711_10000354
464 Ga0207689_10264800
465 Ga0207667_10005363
466 Ga0207667_10006093
467 Ga0207667_10007363
468 Ga0207667_11241338
469 Ga0207651_10384834
470 Ga0207640_10487822
471 Ga0207658_10004577
472 Ga0207703_10000315
473 Ga0207639_10011048
474 Ga0207639_10074890
475 Ga0207639_10111779
476 Ga0207678_10056414
477 Ga0207678_10222385
478 Ga0207702_10078023
479 Ga0207702_10142879
480 Ga0207702_10286872
481 Ga0207702_10325957
482 Ga0207702_11448954
483 Ga0207676_10569514
484 Ga0207674_10013255
485 Ga0207675_100162108
486 Ga0207698_10000255
487 Ga0207698_10003348
488 Ga0207698_10038510
489 Ga0207428_10388465
490 Ga0268266_10749586
491 Ga0307513_10571216
492 Ga0307408_100469910
493 Ga0307514_10006904
494 Ga0307514_10106074
495 Ga0307413_10746744
496 Ga0307518_10085899
497 Ga0307410_10362481
498 Ga0307406_10014583
499 Ga0307406_10492120
500 Ga0307412_10381215
501 Ga0307412_11022193
502 Ga0307409_100238469
503 Ga0307409_100399757
504 Ga0307409_100442609
505 Ga0307409_101501487
506 Ga0307416_100178772
507 Ga0307416_102107960
508 Ga0307414_10452736
509 Ga0307414_10590564
510 Ga0307414_10671180
511 Ga0307411_10396658
512 Ga0307411_10810877
513 Ga0395900_0126976
514 Ga0451789_0909460
515 Ga0451791_0624250
516 Ga0451793_0019243
517 Ga0451807_1375408
518 Ga0451853_2064150
519 Ga0466972_0060151
520 Ga0466972_0323255
521 Ga0466965_0024195
522 Ga0466965_0062113
523 Ga0466965_0148314
524 Ga0466965_0167173
525 Ga0466965_0334832
526 Ga0466966_0085729
527 Ga0466966_0179980
528 Ga0466961_0099107
529 Ga0466961_0267660
530 Ga0466961_0747990
531 Ga0466963_0471686
532 Ga0466970_0055494
533 Ga0466970_0078190
534 Ga0466970_0093965
535 Ga0466970_0147940
536 Ga0466970_0374817
537 Ga0466970_0655739
538 Ga0466957_0160278
539 Ga0466957_0658222
540 Ga0466960_0036661
541 Ga0466960_0037993
542 Ga0466959_0797723
543 Ga0466958_0257921
544 Ga0466958_0400309
545 Ga0495590_0000848
546 Ga0495638_0283395
547 Ga0495633_0365537
548 Ga0495672_0015065
549 Ga0495672_0050751
550 Ga0495686_0119948
551 Ga0495686_0368095
552 Ga0496101_0022285
553 Ga0496102_0504995
554 Ga0496102_1009690
555 Ga0496103_0037021
556 Ga0496104_0009242
557 Ga0496107_0662830
558 Ga0496113_0116609
559 Ga0496114_0091376
560 Ga0496114_0112785
561 Ga0496115_0141169
562 Ga0496117_0000235
563 Ga0496117_0004371
564 Ga0496118_0000601
565 Ga0496118_0021202
566 Ga0496119_0003731
567 Ga0496119_0032933
568 Ga0496120_0005582
569 Ga0496120_0022334
570 Ga0496120_0273187
571 Ga0496120_0323434
572 Ga0496121_0121328
573 Ga0496122_0006733
574 Ga0496122_0024839
575 Ga0496123_0004086
576 Ga0496123_0008629
577 Ga0496124_0002211
578 Ga0496124_0127658
579 Ga0496125_0128302
580 Ga0496125_0134555
581 Ga0496125_0498028
582 Ga0496126_0176059
583 Ga0496126_0207584
584 Ga0496126_0210244
585 Ga0496126_0855701
586 Ga0501032_0014897
587 Ga0501034_0031357
588 Ga0501034_0055291
589 Ga0501034_0061453
590 Ga0501034_0115073
591 Ga0501034_0176515
592 Ga0501034_0203398
593 Ga0501034_0228027
594 Ga0501034_0444185
595 Ga0501034_0453343
596 Ga0501036_0358670
597 Ga0501037_0045466
598 Ga0501037_0054477
599 Ga0501038_0063622
600 Ga0501038_0152005
601 Ga0501043_0001520
602 Ga0501046_0620550
603 Ga0501047_0003895
604 Ga0501047_0014376
605 Ga0501067_0025559
606 Ga0501068_0218457
607 Ga0501070_0000088
608 Ga0501070_0008879
609 Ga0501070_0162738
610 Ga0501070_0167403
611 Ga0501070_1277001
612 Ga0501071_0024351
613 Ga0501073_0000075
614 Ga0501073_0024474
615 Ga0501073_0156706
616 Ga0501074_0050621
617 Ga0501074_0246732
618 Ga0501074_0393684
619 Ga0501080_0000271
620 Ga0501080_0549547
621 Ga0501083_0030070
622 Ga0501083_0862135
623 Ga0501044_0017210
624 Ga0501044_0128481
625 Ga0501044_0140106
626 nmdc:mga00v17_209878_c1
627 nmdc:mga00v17_437464_c1
628 nmdc:mga0yw44_527352_c1
629 nmdc:mga0yw44_78468_c1
630 nmdc:mga08y16_677469_c1
631 nmdc:mga0sz30_129729_c1
632 Ga0500651_0000791
633 Ga0500650_0100482
634 Ga0500556_0287061
635 Ga0500562_000419
636 Ga0500593_038145
637 Ga0500655_030847
638 Ga0500559_0000765
639 Ga0500559_0023234
640 Ga0500559_0053844
641 Ga0500568_0000172
642 Ga0500568_0009909
643 Ga0500573_0000013
644 Ga0500573_0057308
645 Ga0500573_0117030
646 Ga0500573_0133968
647 Ga0500573_0200407
648 Ga0500577_0011140
649 Ga0500616_0001005
650 Ga0500620_015853
651 Ga0501084_1421396
652 Ga0466962_0155381
653 Ga0466962_0312322
654 2587862628
655 2643767542
656 2643875395
657 2644095991
658 2644110816
659 2644183325
660 2644199147
661 2644279509
662 2644382450
663 2644666060
664 2723642189
665 2753301749
666 2808902267
667 2844842398
668 2848552557
669 2852645640
670 2852679169
671 2857735827
672 2857738053
673 2862996035
674 2884765351
675 2895661487
676 2897563226
677 2904502777
678 2908677540
679 2909075108
680 2919043692
681 2919058047
682 2919446051
683 2919524440
684 2928106534
685 2928123201
686 2928155938
687 2928501650
688 2935411558
689 2935891792
690 2964329515
691 2966922306
692 2966924995
693 2984553912
694 8046356259
695 8056039494
696 8057348858

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11343

DUF3145

Protein of unknown function (DUF3145)

30

186

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2caj-assembly1.cif.gz_A-2 nikr from helicobacter pylori in closed trans-conformation and nickel bound to 4 intermediary sites 0.7313 2 81
2wvb-assembly1.cif.gz_A structural and mechanistic insights into helicobacter pylori nikr function 0.7147 2 83
2wvc-assembly1.cif.gz_A structural and mechanistic insights into helicobacter pylori nikr function 0.7043 2 83
2ca9-assembly1.cif.gz_A apo-nikr from helicobacter pylori in closed trans-conformation 0.7012 2 84
4yb6-assembly1.cif.gz_E adenosine triphosphate phosphoribosyltransferase from campylobacter jejuni in complex with the inhibitors amp and histidine 0.6997 7 69
ID Description Score Start End Superfamily
af_Q60386_31_124_3.30.70.1150 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT-like. Chain A, domain 2 0.764 7 75 3.30.70.1150
af_B6TXK4_310_390_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.7443 4 69 3.30.70.260
2cajA02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT-like. Chain A, domain 2 0.7313 2 81 3.30.70.1150
af_C6TJY5_99_186_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.7167 1 77 3.30.70.260
af_Q58601_216_288_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.6938 7 52 3.30.70.120
ID Description Score Start End GO Terms
AF-A0A3D5ATK2-F1-model_v4 DUF3145 domain-containing protein 0.9845 4 76
AF-A0A6B3FHU4-F1-model_v4 DUF3145 family protein 0.9842 4 99
AF-Q83GL3-F1-model_v4 DUF3145 domain-containing protein 0.9826 2 154
AF-A0A838H529-F1-model_v4 DUF3145 family protein 0.9688 1 123
AF-A0A2T5X987-F1-model_v4 Uncharacterized protein DUF3145 0.9672 4 152

Map