F417404

General Info

Members Datasets Scaffolds Average Seq Length
348 176 691 220

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100172604|Ga0068869_1001726041
Length 239
Sequence MTLPTPSAPEISPAKANGSKQYTVALADDHVLIRNGLAGLINSFDEYEVVFQAANGQDFIDQLPLHTAPTVALLDINMPKKNGYETAHFIRHNYPTIKILALSMYDNENYIIRMLKNGARGYILKDAEPAELKMALDSIIQKGYHYSELVTGHLINTINKFDEDVKTKTTMLLSEREIEFLQYVCTELSYKEIADKMYLSPRTIDGYRDAMFEKLNIKTRVGLALYAVRNGIVNLNNKS

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
16 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
29 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
30 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
31 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
32 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
33 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
34 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
35 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
61 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
83 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
84 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
85 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
88 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
89 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
90 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
91 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
93 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
94 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
134 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
135 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
136 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
137 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
138 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
139 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
140 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
141 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
144 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
147 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
148 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
149 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
150 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
151 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
152 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
153 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
154 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
155 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
156 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
157 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
158 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
159 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
160 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
165 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
168 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
169 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
170 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
171 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
172 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
173 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
176 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.71
Metatranscriptomes 0.29
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.2
Nodule 0
Rhizoplane 0.57
Rhizosphere 79.6
Stem 0
Stem Tuber 0
Unclassified 11.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100172604 3300005334 Bacteria 1690
2 JGI24751J29686_10000738 3300002459 Bacteria 7846
3 JGI25154J39366_1000005 3300002738 Bacteria 345115
4 JGI25158J39367_1010169 3300002739 Unclassified 1275
5 JGI25157J39369_1006904 3300002741 Unclassified 1684
6 JGI25406J46586_10002382 3300003203 Bacteria 8887
7 JGI25153J46596_10012670 3300003215 Bacteria 3616
8 rootH1_10019214 3300003316 Bacteria 3245
9 rootH1_10046400 3300003316 Bacteria 9928
10 rootH1_10046400 3300003323 Bacteria 2981
11 rootH1_10049235 3300003316 Bacteria 2354
12 rootH2_10000115 3300003320 Bacteria 133613
13 rootH2_10001712 3300003320 Bacteria 2690
14 rootH2_10031060 3300003320 Bacteria 8831
15 rootH2_10054152 3300003320 Bacteria 4181
16 rootH2_10056897 3300003320 Bacteria 2161
17 rootH2_10138051 3300003320 Bacteria 3598
18 rootL2_10003870 3300003322 Bacteria 5729
19 rootL2_10041996 3300003322 Bacteria 11692
20 rootL2_10059972 3300003322 Bacteria 8503
21 rootL2_10086454 3300003322 Bacteria 1686
22 rootL2_10108085 3300003322 Bacteria 3800
23 rootL2_10123120 3300003322 Bacteria 1863
24 rootL2_10158774 3300003322 Bacteria 5560
25 rootL2_10182924 3300003322 Bacteria 3540
26 rootL2_10190498 3300003322 Bacteria 2432
27 rootH1_10064799 3300003323 Bacteria 4546
28 rootH1_10087887 3300003323 Bacteria 3790
29 JGI25160J50197_1003850 3300003354 Bacteria 6592
30 JGI25160J50197_1003900 3300003354 Bacteria 6538
31 Ga0055531_10000178 3300003794 Bacteria 72147
32 Ga0065714_10158270 3300005288 Bacteria 1066
33 Ga0065704_10108073 3300005289 Bacteria 2039
34 Ga0065712_10010424 3300005290 Bacteria 2709
35 Ga0065712_10302929 3300005290 Bacteria 857
36 Ga0065707_10435081 3300005295 Bacteria 816
37 Ga0070658_10209334 3300005327 Bacteria 1647
38 Ga0070690_100073516 3300005330 Bacteria 2224
39 Ga0070670_100065247 3300005331 Bacteria 3124
40 Ga0070670_100134413 3300005331 Bacteria 2137
41 Ga0070670_100774953 3300005331 Bacteria 865
42 Ga0068869_100019454 3300005334 Bacteria 4640
43 Ga0068869_100034895 3300005334 Bacteria 3562
44 Ga0068869_100720509 3300005334 Bacteria 852
45 Ga0070680_100085114 3300005336 Bacteria 2612
46 Ga0068868_100020730 3300005338 Bacteria 4945
47 Ga0068868_100296902 3300005338 Bacteria 1371
48 Ga0070660_100037818 3300005339 Bacteria 3659
49 Ga0070691_10053333 3300005341 Bacteria 1934
50 Ga0070661_100102161 3300005344 Bacteria 2134
51 Ga0070669_100204204 3300005353 Unclassified 1556
52 Ga0070675_100501845 3300005354 Bacteria 1093
53 Ga0070674_100014800 3300005356 Bacteria 4854
54 Ga0070673_100027735 3300005364 Bacteria 4201
55 Ga0070688_100132224 3300005365 Unclassified 1685
56 Ga0070659_100078454 3300005366 Bacteria 2634
57 Ga0070659_100443569 3300005366 Bacteria 1100
58 Ga0070667_100053180 3300005367 Unclassified 3417
59 Ga0070667_100167471 3300005367 Unclassified 1938
60 Ga0070667_100555709 3300005367 Bacteria 1055
61 Ga0070678_100218053 3300005456 Bacteria 1585
62 Ga0070662_100023806 3300005457 Bacteria 4211
63 Ga0070662_100069684 3300005457 Bacteria 2589
64 Ga0068867_100085616 3300005459 Unclassified 2383
65 Ga0068867_100747554 3300005459 Bacteria 867
66 Ga0070685_10212102 3300005466 Bacteria 1264
67 Ga0070698_100015828 3300005471 Bacteria 7966
68 Ga0068853_100012776 3300005539 Bacteria 6839
69 Ga0070672_100509216 3300005543 Bacteria 1042
70 Ga0070686_100232174 3300005544 Bacteria 1339
71 Ga0070665_100000014 3300005548 Bacteria 484881
72 Ga0070665_100229144 3300005548 Unclassified 1858
73 Ga0070704_100240957 3300005549 Bacteria 1480
74 Ga0068855_100010436 3300005563 Bacteria 11207
75 Ga0068855_100018009 3300005563 Bacteria 8488
76 Ga0068855_100031130 3300005563 Bacteria 6373
77 Ga0068855_101097461 3300005563 Bacteria 832
78 Ga0070664_100040886 3300005564 Bacteria 3911
79 Ga0068857_100041200 3300005577 Bacteria 4096
80 Ga0068857_100085463 3300005577 Bacteria 2820
81 Ga0068857_100215607 3300005577 Unclassified 1752
82 Ga0068857_100822460 3300005577 Bacteria 888
83 Ga0068854_100031890 3300005578 Bacteria 3664
84 Ga0068854_100035201 3300005578 Bacteria 3503
85 Ga0068854_100192374 3300005578 Unclassified 1599
86 Ga0068856_100023637 3300005614 Bacteria 5976
87 Ga0068856_100219986 3300005614 Bacteria 1914
88 Ga0068856_100251079 3300005614 Bacteria 1784
89 Ga0068852_100218152 3300005616 Bacteria 1813
90 Ga0068852_100228124 3300005616 Bacteria 1774
91 Ga0068852_100922096 3300005616 Unclassified 891
92 Ga0068852_101175164 3300005616 Bacteria 788
93 Ga0068859_100013034 3300005617 Bacteria 8353
94 Ga0068859_100014217 3300005617 Bacteria 7983
95 Ga0068859_100020838 3300005617 Bacteria 6580
96 Ga0068859_100087594 3300005617 Bacteria 3162
97 Ga0068859_100544645 3300005617 Bacteria 1255
98 Ga0068859_100628062 3300005617 Bacteria 1167
99 Ga0068864_100681260 3300005618 Unclassified 1003
100 Ga0068861_100383012 3300005719 Unclassified 1243
101 Ga0068861_100586402 3300005719 Bacteria 1021
102 Ga0068851_10040436 3300005834 Bacteria 2343
103 Ga0068851_10428569 3300005834 Unclassified 782
104 Ga0068858_100561179 3300005842 Bacteria 1106
105 Ga0068860_100000061 3300005843 Bacteria 192548
106 Ga0068860_100001945 3300005843 Bacteria 21858
107 Ga0068860_100009259 3300005843 Bacteria 9792
108 Ga0068860_100156883 3300005843 Bacteria 2193
109 Ga0068862_100179044 3300005844 Bacteria 1902
110 Ga0081539_10000816 3300005985 Bacteria 60353
111 Ga0075366_10031793 3300006195 Bacteria 3106
112 Ga0075366_10159303 3300006195 Unclassified 1368
113 Ga0075366_10498682 3300006195 Bacteria 753
114 Ga0097621_100002688 3300006237 Bacteria 12170
115 Ga0097621_100154587 3300006237 Bacteria 1968
116 Ga0097621_100425803 3300006237 Unclassified 1192
117 Ga0097621_100988557 3300006237 Bacteria 787
118 Ga0068871_100029753 3300006358 Bacteria 4293
119 Ga0068871_100317008 3300006358 Unclassified 1372
120 Ga0068871_100860303 3300006358 Bacteria 839
121 Ga0075428_100437298 3300006844 Bacteria 1401
122 Ga0068865_100142994 3300006881 Bacteria 1806
123 Ga0068865_100475672 3300006881 Unclassified 1037
124 Ga0097620_100013034 3300006931 Bacteria 8353
125 Ga0097620_100014217 3300006931 Bacteria 7983
126 Ga0097620_100020838 3300006931 Bacteria 6580
127 Ga0097620_100087600 3300006931 Bacteria 3162
128 Ga0097620_100544644 3300006931 Bacteria 1255
129 Ga0097620_100628050 3300006931 Bacteria 1167
130 Ga0105240_10000674 3300009093 Bacteria 62689
131 Ga0105240_10052360 3300009093 Bacteria 5133
132 Ga0105240_10089003 3300009093 Bacteria 3777
133 Ga0105240_10180772 3300009093 Bacteria 2489
134 Ga0105240_10307751 3300009093 Bacteria 1811
135 Ga0105247_10002375 3300009101 Bacteria 12826
136 Ga0105241_10004785 3300009174 Bacteria 9968
137 Ga0105241_10037374 3300009174 Bacteria 3657
138 Ga0105241_10310778 3300009174 Bacteria 1356
139 Ga0105242_10468471 3300009176 Unclassified 1191
140 Ga0105237_10005661 3300009545 Bacteria 14059
141 Ga0105237_10013613 3300009545 Bacteria 8523
142 Ga0105237_10017888 3300009545 Bacteria 7348
143 Ga0105237_10062942 3300009545 Unclassified 3709
144 Ga0105237_10073854 3300009545 Bacteria 3402
145 Ga0105237_10416888 3300009545 Unclassified 1348
146 Ga0105237_10418069 3300009545 Bacteria 1346
147 Ga0105238_10003055 3300009551 Bacteria 16687
148 Ga0105238_10005558 3300009551 Bacteria 12454
149 Ga0105238_10071432 3300009551 Bacteria 3469
150 Ga0105238_10370156 3300009551 Bacteria 1423
151 Ga0105249_10001164 3300009553 Bacteria 23267
152 Ga0105249_10015985 3300009553 Bacteria 6652
153 Ga0105249_10025816 3300009553 Bacteria 5291
154 Ga0105249_10030363 3300009553 Bacteria 4886
155 Ga0105249_10074041 3300009553 Bacteria 3151
156 Ga0105239_10002459 3300010375 Bacteria 23594
157 Ga0105239_10024986 3300010375 Bacteria 6580
158 Ga0105239_10039290 3300010375 Bacteria 5184
159 Ga0105239_10075040 3300010375 Bacteria 3718
160 Ga0105239_10230668 3300010375 Bacteria 2077
161 Ga0105239_10870617 3300010375 Bacteria 1033
162 Ga0105246_10747447 3300011119 Bacteria 862
163 Ga0157373_10023071 3300013100 Bacteria 4512
164 Ga0157371_10105456 3300013102 Bacteria 2000
165 Ga0157371_10175649 3300013102 Unclassified 1531
166 Ga0157370_10003400 3300013104 Bacteria 18691
167 Ga0157370_10126825 3300013104 Bacteria 2382
168 Ga0157370_10441963 3300013104 Bacteria 1196
169 Ga0157369_10013951 3300013105 Bacteria 9080
170 Ga0157369_10211864 3300013105 Bacteria 2031
171 Ga0157369_10237900 3300013105 Bacteria 1902
172 Ga0157369_11038993 3300013105 Unclassified 838
173 Ga0157374_10053052 3300013296 Bacteria 3779
174 Ga0157374_10117063 3300013296 Bacteria 2568
175 Ga0157374_10578595 3300013296 Bacteria 1132
176 Ga0157378_10005192 3300013297 Bacteria 11431
177 Ga0157378_10030440 3300013297 Bacteria 4769
178 Ga0157378_10068309 3300013297 Bacteria 3187
179 Ga0157378_10207199 3300013297 Bacteria 1857
180 Ga0157378_10221875 3300013297 Unclassified 1797
181 Ga0163162_10000432 3300013306 Bacteria 38691
182 Ga0163162_10000735 3300013306 Bacteria 30396
183 Ga0163162_10007128 3300013306 Bacteria 10849
184 Ga0163162_10186297 3300013306 Bacteria 2202
185 Ga0157372_10001947 3300013307 Bacteria 22414
186 Ga0157372_10008108 3300013307 Bacteria 11174
187 Ga0157372_10065265 3300013307 Bacteria 4087
188 Ga0157372_10244759 3300013307 Bacteria 2081
189 Ga0157372_10409820 3300013307 Unclassified 1579
190 Ga0157372_10600138 3300013307 Unclassified 1283
191 Ga0157372_10652233 3300013307 Bacteria 1226
192 Ga0157375_10013720 3300013308 Bacteria 7223
193 Ga0157375_10832997 3300013308 Bacteria 1070
194 Ga0163163_11209810 3300014325 Bacteria 818
195 Ga0157380_10005424 3300014326 Bacteria 8909
196 Ga0157380_10326547 3300014326 Bacteria 1425
197 Ga0157377_10020705 3300014745 Bacteria 3450
198 Ga0157377_10036763 3300014745 Bacteria 2695
199 Ga0157379_10389079 3300014968 Unclassified 1280
200 Ga0157379_10529347 3300014968 Bacteria 1095
201 Ga0157376_10060720 3300014969 Bacteria 3176
202 Ga0157376_10485738 3300014969 Bacteria 1211
203 Ga0157376_10795988 3300014969 Bacteria 958
204 Ga0163161_10098189 3300017792 Unclassified 2176
205 Ga0163161_10192010 3300017792 Bacteria 1570
206 Ga0206356_10432597 3300020070 Bacteria 1220
207 Ga0209436_100460 3300025208 Bacteria 18120
208 Ga0209646_1000017 3300025246 Bacteria 488265
209 Ga0209646_1003541 3300025246 Bacteria 3057
210 Ga0209026_1000272 3300025250 Bacteria 61806
211 Ga0209130_1005521 3300025284 Unclassified 4359
212 Ga0209758_1000547 3300025297 Bacteria 59706
213 Ga0209758_1000854 3300025297 Bacteria 42427
214 Ga0207426_1000104 3300025302 Bacteria 249464
215 Ga0207426_1000412 3300025302 Bacteria 71401
216 Ga0209257_1000004 3300025304 Bacteria 1678347
217 Ga0207656_10026452 3300025321 Bacteria 2366
218 Ga0207688_10247936 3300025901 Unclassified 1078
219 Ga0207680_10573192 3300025903 Bacteria 806
220 Ga0207647_10021544 3300025904 Bacteria 4301
221 Ga0207705_10240592 3300025909 Bacteria 1379
222 Ga0207654_10179608 3300025911 Bacteria 1380
223 Ga0207695_10039865 3300025913 Bacteria 5044
224 Ga0207695_10081805 3300025913 Bacteria 3267
225 Ga0207695_10121146 3300025913 Bacteria 2584
226 Ga0207695_10302290 3300025913 Bacteria 1491
227 Ga0207671_10001999 3300025914 Bacteria 22454
228 Ga0207671_10004154 3300025914 Bacteria 13998
229 Ga0207671_10007163 3300025914 Bacteria 9725
230 Ga0207671_10071755 3300025914 Bacteria 2583
231 Ga0207671_10205423 3300025914 Bacteria 1539
232 Ga0207657_10040450 3300025919 Bacteria 4130
233 Ga0207649_10045563 3300025920 Bacteria 2689
234 Ga0207681_10232904 3300025923 Unclassified 1430
235 Ga0207694_10074088 3300025924 Bacteria 2665
236 Ga0207650_10165495 3300025925 Unclassified 1755
237 Ga0207659_10686958 3300025926 Bacteria 876
238 Ga0207690_10076139 3300025932 Bacteria 2329
239 Ga0207690_10113798 3300025932 Bacteria 1953
240 Ga0207706_10001917 3300025933 Bacteria 20439
241 Ga0207686_10540275 3300025934 Unclassified 910
242 Ga0207669_10299278 3300025937 Bacteria 1222
243 Ga0207691_10416467 3300025940 Bacteria 1145
244 Ga0207689_10027586 3300025942 Bacteria 4751
245 Ga0207689_10082382 3300025942 Bacteria 2645
246 Ga0207689_10673615 3300025942 Bacteria 872
247 Ga0207679_10021828 3300025945 Bacteria 4348
248 Ga0207667_10000098 3300025949 Bacteria 140051
249 Ga0207667_10122872 3300025949 Bacteria 2675
250 Ga0207667_10550245 3300025949 Bacteria 1167
251 Ga0207651_10026238 3300025960 Bacteria 3635
252 Ga0207651_10089734 3300025960 Bacteria 2245
253 Ga0207712_10002084 3300025961 Bacteria 13090
254 Ga0207712_10077302 3300025961 Bacteria 2412
255 Ga0207712_10151380 3300025961 Bacteria 1792
256 Ga0207712_10426943 3300025961 Bacteria 1119
257 Ga0207640_10068402 3300025981 Bacteria 2380
258 Ga0207640_10084445 3300025981 Bacteria 2180
259 Ga0207640_10336513 3300025981 Bacteria 1207
260 Ga0207658_10036595 3300025986 Bacteria 3520
261 Ga0207658_10041701 3300025986 Unclassified 3325
262 Ga0207677_10011446 3300026023 Bacteria 5061
263 Ga0207677_10033367 3300026023 Bacteria 3321
264 Ga0207703_10490883 3300026035 Bacteria 1152
265 Ga0207639_10036168 3300026041 Bacteria 3658
266 Ga0207639_10068291 3300026041 Bacteria 2769
267 Ga0207702_10176965 3300026078 Bacteria 1961
268 Ga0207702_10368577 3300026078 Bacteria 1378
269 Ga0207702_10420428 3300026078 Unclassified 1292
270 Ga0207641_10384315 3300026088 Bacteria 1345
271 Ga0207648_10011124 3300026089 Bacteria 8489
272 Ga0207648_10434933 3300026089 Unclassified 1193
273 Ga0207674_10014242 3300026116 Bacteria 8788
274 Ga0207674_10099646 3300026116 Bacteria 2888
275 Ga0207675_100037642 3300026118 Bacteria 4512
276 Ga0207675_100703097 3300026118 Bacteria 1020
277 Ga0207698_10015565 3300026142 Bacteria 5097
278 Ga0207698_10167263 3300026142 Bacteria 1931
279 Ga0207698_10320533 3300026142 Bacteria 1451
280 Ga0268266_10000068 3300028379 Bacteria 241100
281 Ga0268265_10649447 3300028380 Bacteria 1014
282 Ga0268264_10000079 3300028381 Bacteria 249516
283 Ga0268264_10003063 3300028381 Bacteria 14479
284 Ga0268264_10008167 3300028381 Bacteria 8696
285 Ga0268264_10183750 3300028381 Unclassified 1901
286 Ga0307515_10000001 3300028794 Bacteria 4259510
287 Ga0307515_10000010 3300028794 Bacteria 651586
288 Ga0307511_10000201 3300030521 Bacteria 60079
289 Ga0265327_10024663 3300031251 Bacteria 3525
290 Ga0265327_10054662 3300031251 Bacteria 2066
291 Ga0307513_10277306 3300031456 Bacteria 1456
292 Ga0307516_10104216 3300031730 Bacteria 2649
293 Ga0307415_100353606 3300032126 Bacteria 1238
294 Ga0436365_1394647 3300039437 Bacteria 1834
295 Ga0436365_1621384 3300039437 Bacteria 2716
296 Ga0451807_0229088 3300041486 Unclassified 795
297 Ga0451853_1880095 3300041512 Bacteria 1990
298 Ga0451577_0003987 3300042876 Bacteria 15905
299 Ga0466969_0163413 3300044656 Bacteria 1023
300 Ga0466972_0016582 3300044658 Bacteria 3683
301 Ga0466972_0031196 3300044658 Bacteria 2622
302 Ga0466961_0023412 3300044693 Bacteria 3974
303 Ga0466963_0247831 3300044694 Bacteria 1250
304 Ga0466970_0086254 3300044765 Bacteria 1701
305 Ga0466957_0000068 3300044842 Bacteria 40031
306 Ga0466957_0011945 3300044842 Bacteria 5021
307 Ga0466957_0170065 3300044842 Bacteria 1419
308 Ga0466959_0046186 3300045049 Bacteria 3205
309 Ga0466958_0104277 3300045836 Bacteria 1766
310 Ga0495629_0338619 3300046459 Bacteria 1027
311 Ga0495585_0000572 3300046492 Bacteria 34663
312 Ga0495631_0106018 3300046518 Bacteria 1209
313 Ga0495648_0006442 3300046524 Bacteria 9584
314 Ga0495648_0019590 3300046524 Bacteria 4751
315 Ga0495654_0133725 3300046530 Bacteria 1111
316 Ga0495668_0000017 3300046616 Bacteria 434025
317 Ga0495668_0003210 3300046616 Bacteria 12489
318 Ga0495625_0000783 3300046660 Bacteria 44183
319 Ga0495661_0275568 3300046665 Bacteria 850
320 Ga0495649_0065088 3300046694 Bacteria 1957
321 Ga0495687_000711 3300047443 Bacteria 36891
322 Ga0495686_0007187 3300047472 Bacteria 8383
323 Ga0495686_0039964 3300047472 Bacteria 2994
324 Ga0495686_0054275 3300047472 Bacteria 2509
325 Ga0495614_0001666 3300048089 Bacteria 9686
326 Ga0496115_0012389 3300048918 Bacteria 6415
327 Ga0496126_0006279 3300048929 Bacteria 13270
328 Ga0501034_0110210 3300049571 Bacteria 2744
329 Ga0501044_0436041 3300049823 Unclassified 1219
330 nmdc:mga0k408_3233_c1 3300050493 Bacteria 8623
331 nmdc:mga0k408_424131_c1 3300050493 Bacteria 791
332 nmdc:mga0k408_69386_c1 3300050493 Bacteria 2057
333 Ga0500578_0000060 3300053086 Bacteria 118274
334 Ga0500578_0175754 3300053086 Bacteria 1322
335 Ga0500646_0016204 3300053090 Bacteria 1945
336 Ga0500646_0140190 3300053090 Bacteria 793
337 Ga0500583_0005214 3300053092 Bacteria 4331
338 Ga0500583_0022209 3300053092 Bacteria 2655
339 Ga0500642_0014555 3300053130 Bacteria 2931
340 Ga0500655_010629 3300053133 Bacteria 1663
341 Ga0500604_0000667 3300053151 Bacteria 9414
342 Ga0500616_0010605 3300053153 Bacteria 5503
343 Ga0500616_0155621 3300053153 Bacteria 1053
344 Ga0500622_0000398 3300053156 Bacteria 41643
345 Ga0500622_0009155 3300053156 Bacteria 5497
346 Ga0500611_000008 3300053727 Bacteria 198346
347 Ga0068869_100172604
348 JGI24751J29686_10000738
349 JGI25154J39366_1000005
350 JGI25158J39367_1010169
351 JGI25157J39369_1006904
352 JGI25406J46586_10002382
353 JGI25153J46596_10012670
354 rootH1_10019214
355 rootH1_10046400
356 rootH1_10049235
357 rootH2_10000115
358 rootH2_10001712
359 rootH2_10031060
360 rootH2_10054152
361 rootH2_10056897
362 rootH2_10138051
363 rootL2_10003870
364 rootL2_10041996
365 rootL2_10059972
366 rootL2_10086454
367 rootL2_10108085
368 rootL2_10123120
369 rootL2_10158774
370 rootL2_10182924
371 rootL2_10190498
372 rootH1_10064799
373 rootH1_10087887
374 JGI25160J50197_1003850
375 JGI25160J50197_1003900
376 Ga0055531_10000178
377 Ga0065714_10158270
378 Ga0065704_10108073
379 Ga0065712_10010424
380 Ga0065712_10302929
381 Ga0065707_10435081
382 Ga0070658_10209334
383 Ga0070690_100073516
384 Ga0070670_100065247
385 Ga0070670_100134413
386 Ga0070670_100774953
387 Ga0068869_100019454
388 Ga0068869_100034895
389 Ga0068869_100720509
390 Ga0070680_100085114
391 Ga0068868_100020730
392 Ga0068868_100296902
393 Ga0070660_100037818
394 Ga0070691_10053333
395 Ga0070661_100102161
396 Ga0070669_100204204
397 Ga0070675_100501845
398 Ga0070674_100014800
399 Ga0070673_100027735
400 Ga0070688_100132224
401 Ga0070659_100078454
402 Ga0070659_100443569
403 Ga0070667_100053180
404 Ga0070667_100167471
405 Ga0070667_100555709
406 Ga0070678_100218053
407 Ga0070662_100023806
408 Ga0070662_100069684
409 Ga0068867_100085616
410 Ga0068867_100747554
411 Ga0070685_10212102
412 Ga0070698_100015828
413 Ga0068853_100012776
414 Ga0070672_100509216
415 Ga0070686_100232174
416 Ga0070665_100000014
417 Ga0070665_100229144
418 Ga0070704_100240957
419 Ga0068855_100010436
420 Ga0068855_100018009
421 Ga0068855_100031130
422 Ga0068855_101097461
423 Ga0070664_100040886
424 Ga0068857_100041200
425 Ga0068857_100085463
426 Ga0068857_100215607
427 Ga0068857_100822460
428 Ga0068854_100031890
429 Ga0068854_100035201
430 Ga0068854_100192374
431 Ga0068856_100023637
432 Ga0068856_100219986
433 Ga0068856_100251079
434 Ga0068852_100218152
435 Ga0068852_100228124
436 Ga0068852_100922096
437 Ga0068852_101175164
438 Ga0068859_100013034
439 Ga0068859_100014217
440 Ga0068859_100020838
441 Ga0068859_100087594
442 Ga0068859_100544645
443 Ga0068859_100628062
444 Ga0068864_100681260
445 Ga0068861_100383012
446 Ga0068861_100586402
447 Ga0068851_10040436
448 Ga0068851_10428569
449 Ga0068858_100561179
450 Ga0068860_100000061
451 Ga0068860_100001945
452 Ga0068860_100009259
453 Ga0068860_100156883
454 Ga0068862_100179044
455 Ga0081539_10000816
456 Ga0075366_10031793
457 Ga0075366_10159303
458 Ga0075366_10498682
459 Ga0097621_100002688
460 Ga0097621_100154587
461 Ga0097621_100425803
462 Ga0097621_100988557
463 Ga0068871_100029753
464 Ga0068871_100317008
465 Ga0068871_100860303
466 Ga0075428_100437298
467 Ga0068865_100142994
468 Ga0068865_100475672
469 Ga0097620_100013034
470 Ga0097620_100014217
471 Ga0097620_100020838
472 Ga0097620_100087600
473 Ga0097620_100544644
474 Ga0097620_100628050
475 Ga0105240_10000674
476 Ga0105240_10052360
477 Ga0105240_10089003
478 Ga0105240_10180772
479 Ga0105240_10307751
480 Ga0105247_10002375
481 Ga0105241_10004785
482 Ga0105241_10037374
483 Ga0105241_10310778
484 Ga0105242_10468471
485 Ga0105237_10005661
486 Ga0105237_10013613
487 Ga0105237_10017888
488 Ga0105237_10062942
489 Ga0105237_10073854
490 Ga0105237_10416888
491 Ga0105237_10418069
492 Ga0105238_10003055
493 Ga0105238_10005558
494 Ga0105238_10071432
495 Ga0105238_10370156
496 Ga0105249_10001164
497 Ga0105249_10015985
498 Ga0105249_10025816
499 Ga0105249_10030363
500 Ga0105249_10074041
501 Ga0105239_10002459
502 Ga0105239_10024986
503 Ga0105239_10039290
504 Ga0105239_10075040
505 Ga0105239_10230668
506 Ga0105239_10870617
507 Ga0105246_10747447
508 Ga0157373_10023071
509 Ga0157371_10105456
510 Ga0157371_10175649
511 Ga0157370_10003400
512 Ga0157370_10126825
513 Ga0157370_10441963
514 Ga0157369_10013951
515 Ga0157369_10211864
516 Ga0157369_10237900
517 Ga0157369_11038993
518 Ga0157374_10053052
519 Ga0157374_10117063
520 Ga0157374_10578595
521 Ga0157378_10005192
522 Ga0157378_10030440
523 Ga0157378_10068309
524 Ga0157378_10207199
525 Ga0157378_10221875
526 Ga0163162_10000432
527 Ga0163162_10000735
528 Ga0163162_10007128
529 Ga0163162_10186297
530 Ga0157372_10001947
531 Ga0157372_10008108
532 Ga0157372_10065265
533 Ga0157372_10244759
534 Ga0157372_10409820
535 Ga0157372_10600138
536 Ga0157372_10652233
537 Ga0157375_10013720
538 Ga0157375_10832997
539 Ga0163163_11209810
540 Ga0157380_10005424
541 Ga0157380_10326547
542 Ga0157377_10020705
543 Ga0157377_10036763
544 Ga0157379_10389079
545 Ga0157379_10529347
546 Ga0157376_10060720
547 Ga0157376_10485738
548 Ga0157376_10795988
549 Ga0163161_10098189
550 Ga0163161_10192010
551 Ga0206356_10432597
552 Ga0209436_100460
553 Ga0209646_1000017
554 Ga0209646_1003541
555 Ga0209026_1000272
556 Ga0209130_1005521
557 Ga0209758_1000547
558 Ga0209758_1000854
559 Ga0207426_1000104
560 Ga0207426_1000412
561 Ga0209257_1000004
562 Ga0207656_10026452
563 Ga0207688_10247936
564 Ga0207680_10573192
565 Ga0207647_10021544
566 Ga0207705_10240592
567 Ga0207654_10179608
568 Ga0207695_10039865
569 Ga0207695_10081805
570 Ga0207695_10121146
571 Ga0207695_10302290
572 Ga0207671_10001999
573 Ga0207671_10004154
574 Ga0207671_10007163
575 Ga0207671_10071755
576 Ga0207671_10205423
577 Ga0207657_10040450
578 Ga0207649_10045563
579 Ga0207681_10232904
580 Ga0207694_10074088
581 Ga0207650_10165495
582 Ga0207659_10686958
583 Ga0207690_10076139
584 Ga0207690_10113798
585 Ga0207706_10001917
586 Ga0207686_10540275
587 Ga0207669_10299278
588 Ga0207691_10416467
589 Ga0207689_10027586
590 Ga0207689_10082382
591 Ga0207689_10673615
592 Ga0207679_10021828
593 Ga0207667_10000098
594 Ga0207667_10122872
595 Ga0207667_10550245
596 Ga0207651_10026238
597 Ga0207651_10089734
598 Ga0207712_10002084
599 Ga0207712_10077302
600 Ga0207712_10151380
601 Ga0207712_10426943
602 Ga0207640_10068402
603 Ga0207640_10084445
604 Ga0207640_10336513
605 Ga0207658_10036595
606 Ga0207658_10041701
607 Ga0207677_10011446
608 Ga0207677_10033367
609 Ga0207703_10490883
610 Ga0207639_10036168
611 Ga0207639_10068291
612 Ga0207702_10176965
613 Ga0207702_10368577
614 Ga0207702_10420428
615 Ga0207641_10384315
616 Ga0207648_10011124
617 Ga0207648_10434933
618 Ga0207674_10014242
619 Ga0207674_10099646
620 Ga0207675_100037642
621 Ga0207675_100703097
622 Ga0207698_10015565
623 Ga0207698_10167263
624 Ga0207698_10320533
625 Ga0268266_10000068
626 Ga0268265_10649447
627 Ga0268264_10000079
628 Ga0268264_10003063
629 Ga0268264_10008167
630 Ga0268264_10183750
631 Ga0307515_10000001
632 Ga0307515_10000010
633 Ga0307511_10000201
634 Ga0265327_10024663
635 Ga0265327_10054662
636 Ga0307513_10277306
637 Ga0307516_10104216
638 Ga0307415_100353606
639 Ga0436365_1394647
640 Ga0436365_1621384
641 Ga0451807_0229088
642 Ga0451853_1880095
643 Ga0451577_0003987
644 Ga0466969_0163413
645 Ga0466972_0016582
646 Ga0466972_0031196
647 Ga0466961_0023412
648 Ga0466963_0247831
649 Ga0466970_0086254
650 Ga0466957_0000068
651 Ga0466957_0011945
652 Ga0466957_0170065
653 Ga0466959_0046186
654 Ga0466958_0104277
655 Ga0495629_0338619
656 Ga0495585_0000572
657 Ga0495631_0106018
658 Ga0495648_0006442
659 Ga0495648_0019590
660 Ga0495654_0133725
661 Ga0495668_0000017
662 Ga0495668_0003210
663 Ga0495625_0000783
664 Ga0495661_0275568
665 Ga0495649_0065088
666 Ga0495687_000711
667 Ga0495686_0007187
668 Ga0495686_0039964
669 Ga0495686_0054275
670 Ga0495614_0001666
671 Ga0496115_0012389
672 Ga0496126_0006279
673 Ga0501034_0110210
674 Ga0501044_0436041
675 nmdc:mga0k408_3233_c1
676 nmdc:mga0k408_424131_c1
677 nmdc:mga0k408_69386_c1
678 Ga0500578_0000060
679 Ga0500578_0175754
680 Ga0500646_0016204
681 Ga0500646_0140190
682 Ga0500583_0005214
683 Ga0500583_0022209
684 Ga0500642_0014555
685 Ga0500655_010629
686 Ga0500604_0000667
687 Ga0500616_0010605
688 Ga0500616_0155621
689 Ga0500622_0000398
690 Ga0500622_0009155
691 Ga0500611_000008

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

171

227

0.97

PF00072

Response_reg

Response regulator receiver domain

24

137

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ulq-assembly1.cif.gz_B crystal structure of the anti-activator rapf complexed with the response regulator coma dna binding domain 0.9507 156 211
4qyw-assembly1.cif.gz_A structure of phosphono-chey from t.maritima 0.9468 8 123
6c40-assembly1.cif.gz_D-2 chey41pytyrd54k from thermotoga maritima 0.9455 8 123
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9412 157 217
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9408 156 217
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9523 155 211 1.10.10.10
af_Q2FVQ9_2_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9516 7 87 3.40.50.2300
4tmyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9514 7 123 3.40.50.2300
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9507 156 211 1.10.10.10
3cloA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9488 157 211 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4Q5QLG2-F1-model_v4 Response regulator transcription factor 0.9531 1 123 GO:0000160
AF-A0A4Q5RT77-F1-model_v4 Response regulator transcription factor 0.9524 1 126 GO:0000160
AF-A0A0C1KQW3-F1-model_v4 Response regulatory domain-containing protein 0.9389 1 125 GO:0000160
AF-A0A4Q5QLG2-F1-model_v4 Response regulator transcription factor 0.9382 1 123 GO:0000160
AF-A0A4Q3THI9-F1-model_v4 deleted 0.917 1 135

Map