F417429

General Info

Members Datasets Scaffolds Average Seq Length
348 176 696 615

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100030652|Ga0070714_1000306522
Length 700
Sequence MTLTHSGPQAAPLHAARLTLDRACEHLASLQHEPGWWQGELETNVTMDAEDLLLRQFLGVRTEADTAAAARWIRSKQRADGTWANFHGGPGDLSTTVEAYVALRLAGDAPDEPHMDTAARWIRAQGGIEATRVFTRIWLAMFGQWSWDDLPVIPPELIYLPAWFPLNVYDWACWARQTIVPLAVVASFRPSRPLGFSLNELFTGEKPQGKERDPWAMVFNGLDKVLHTYQNRALGARRHHSTAGLSAAPNGPRPTDAATPKQPASGATGFLRVSRLRAVTSASPGRRRAHNPAAVVRRAALRRCADWIIARQEQDGCWGGIQPPWVYSLIALHLLGYRLDHPVLARGIAGLERFMIREDGPDGPTRRMEACQSPVWDTVLAMVALGDAGLKPDDPVLTKAAEWVLDEEIPGPGDWQVRRPHLEPGGWAFEFDNDGYPDTDDTAEVILALRKVWPAGRDHSDPGRSAQPTGRRPSGGVPSAPSEDRAERAIDRGIRWLIGMQSKDGGWGAFDADNVTDLVNKLPFCDFGAVIDPPSADVTAHIVEALAGEGMADSEAARRGVVWLLKAQESDGSWFGRWGANYVYGTGAVVPALIAAGVGEDLRSYDDPGLAGQGESTASQTAWALLALLAADGSGSANSPAVQRGIGWLGTNQRADGGWDEPQYTGTGFPGDFYINYHLYRLVFPVSALGRYLRIAEGAA

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
81 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
82 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
83 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
88 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
91 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
92 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
95 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
96 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
100 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
107 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
116 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
117 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
118 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
119 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
120 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
121 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
133 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
134 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
135 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
141 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
142 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
145 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
146 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
147 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
148 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
149 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
150 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
157 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
158 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
159 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
160 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
168 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
169 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
170 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
176 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.99
Metatranscriptomes 2.01
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.29
Nodule 0
Rhizoplane 7.18
Rhizosphere 87.36
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100030652 3300005435 Bacteria 4479
2 Ga0070658_10004900 3300005327 Bacteria 10909
3 Ga0070658_10014140 3300005327 Bacteria 6407
4 Ga0070658_10133731 3300005327 Bacteria 2068
5 Ga0070683_100065618 3300005329 Bacteria 3380
6 Ga0070666_10052714 3300005335 Bacteria 2742
7 Ga0070680_100001649 3300005336 Bacteria 16309
8 Ga0070680_100005131 3300005336 Bacteria 9893
9 Ga0070680_100050960 3300005336 Bacteria 3377
10 Ga0070682_100053016 3300005337 Bacteria 2540
11 Ga0070659_100000331 3300005366 Bacteria 36451
12 Ga0070714_100000680 3300005435 Bacteria 23985
13 Ga0070714_100002589 3300005435 Bacteria 13329
14 Ga0070713_100091581 3300005436 Bacteria 2616
15 Ga0070711_100030894 3300005439 Bacteria 3551
16 Ga0070705_100042480 3300005440 Bacteria 2599
17 Ga0070708_100068401 3300005445 Bacteria 3192
18 Ga0070663_100007074 3300005455 Bacteria 6806
19 Ga0070681_10000025 3300005458 Bacteria 110322
20 Ga0070681_10027151 3300005458 Bacteria 5756
21 Ga0070706_100004389 3300005467 Bacteria 13622
22 Ga0070706_100025796 3300005467 Bacteria 5409
23 Ga0070707_100004574 3300005468 Bacteria 12953
24 Ga0070707_100049189 3300005468 Bacteria 4041
25 Ga0070707_100058245 3300005468 Bacteria 3706
26 Ga0070698_100000057 3300005471 Bacteria 79148
27 Ga0070698_100001287 3300005471 Bacteria 27980
28 Ga0070698_100002969 3300005471 Bacteria 18662
29 Ga0070698_100007877 3300005471 Bacteria 11534
30 Ga0070698_100007905 3300005471 Bacteria 11511
31 Ga0070679_100000071 3300005530 Bacteria 76030
32 Ga0070679_100029675 3300005530 Bacteria 5394
33 Ga0070679_100033070 3300005530 Bacteria 5119
34 Ga0070684_100026322 3300005535 Bacteria 4899
35 Ga0070684_100069621 3300005535 Bacteria 3094
36 Ga0070665_100041739 3300005548 Bacteria 4612
37 Ga0068855_100111767 3300005563 Bacteria 3136
38 Ga0070664_100031979 3300005564 Bacteria 4401
39 Ga0068856_100084696 3300005614 Bacteria 3149
40 Ga0068852_100050758 3300005616 Bacteria 3556
41 Ga0068859_100000488 3300005617 Bacteria 39249
42 Ga0068864_100019349 3300005618 Bacteria 5692
43 Ga0068864_100057304 3300005618 Bacteria 3366
44 Ga0081540_1000151 3300005983 Bacteria 71183
45 Ga0081540_1004184 3300005983 Bacteria 11101
46 Ga0070717_10002789 3300006028 Bacteria 12368
47 Ga0070717_10003201 3300006028 Bacteria 11693
48 Ga0070717_10006461 3300006028 Bacteria 8623
49 Ga0070717_10028131 3300006028 Bacteria 4496
50 Ga0070717_10066927 3300006028 Bacteria 2988
51 Ga0070716_100001145 3300006173 Bacteria 11690
52 Ga0070716_100005427 3300006173 Bacteria 6177
53 Ga0070716_100005935 3300006173 Bacteria 5944
54 Ga0068871_100107222 3300006358 Bacteria 2346
55 Ga0097620_100000488 3300006931 Bacteria 39249
56 Ga0111539_10118182 3300009094 Bacteria 3107
57 Ga0105247_10007069 3300009101 Bacteria 6899
58 Ga0114129_10006397 3300009147 Bacteria 16699
59 Ga0105238_10048939 3300009551 Bacteria 4259
60 Ga0105246_10015547 3300011119 Bacteria 4808
61 Ga0157369_10001126 3300013105 Bacteria 33440
62 Ga0157374_10075486 3300013296 Bacteria 3185
63 Ga0163162_10058387 3300013306 Bacteria 3887
64 Ga0163163_10012357 3300014325 Bacteria 7779
65 Ga0163163_10020338 3300014325 Bacteria 6249
66 Ga0157379_10004765 3300014968 Bacteria 11655
67 Ga0157376_10044587 3300014969 Bacteria 3646
68 Ga0197907_11016726 3300020069 Bacteria 3783
69 Ga0206351_10519679 3300020077 Bacteria 3678
70 Ga0206350_11137108 3300020080 Bacteria 2392
71 Ga0206354_10746971 3300020081 Bacteria 4907
72 Ga0206353_11506991 3300020082 Bacteria 13550
73 Ga0213875_10000727 3300021388 Bacteria 25103
74 Ga0213875_10002626 3300021388 Bacteria 10654
75 Ga0213875_10002831 3300021388 Bacteria 10172
76 Ga0224712_10002274 3300022467 Bacteria 4702
77 Ga0207426_1006820 3300025302 Bacteria 4886
78 Ga0207692_10016950 3300025898 Bacteria 3238
79 Ga0207710_10004755 3300025900 Bacteria 5887
80 Ga0207688_10005682 3300025901 Bacteria 6782
81 Ga0207699_10002468 3300025906 Bacteria 8726
82 Ga0207699_10006022 3300025906 Bacteria 5837
83 Ga0207699_10007800 3300025906 Bacteria 5246
84 Ga0207699_10014417 3300025906 Bacteria 4075
85 Ga0207705_10001134 3300025909 Bacteria 21687
86 Ga0207705_10004403 3300025909 Bacteria 10642
87 Ga0207684_10000495 3300025910 Bacteria 49988
88 Ga0207684_10002613 3300025910 Bacteria 18016
89 Ga0207684_10021865 3300025910 Bacteria 5461
90 Ga0207707_10000023 3300025912 Bacteria 183706
91 Ga0207707_10002917 3300025912 Bacteria 15257
92 Ga0207707_10027524 3300025912 Bacteria 4971
93 Ga0207693_10021320 3300025915 Bacteria 5150
94 Ga0207693_10036426 3300025915 Bacteria 3879
95 Ga0207663_10004555 3300025916 Bacteria 6907
96 Ga0207663_10006664 3300025916 Bacteria 5938
97 Ga0207663_10045323 3300025916 Bacteria 2704
98 Ga0207660_10001619 3300025917 Bacteria 15103
99 Ga0207660_10010837 3300025917 Bacteria 5925
100 Ga0207660_10030545 3300025917 Bacteria 3704
101 Ga0207662_10004308 3300025918 Bacteria 7470
102 Ga0207657_10008933 3300025919 Bacteria 10125
103 Ga0207657_10027975 3300025919 Bacteria 5152
104 Ga0207652_10000039 3300025921 Bacteria 131660
105 Ga0207652_10000618 3300025921 Bacteria 35358
106 Ga0207646_10001307 3300025922 Bacteria 30937
107 Ga0207646_10005205 3300025922 Bacteria 13745
108 Ga0207646_10032421 3300025922 Bacteria 4729
109 Ga0207700_10002040 3300025928 Bacteria 11551
110 Ga0207664_10000917 3300025929 Bacteria 19842
111 Ga0207664_10001098 3300025929 Bacteria 18046
112 Ga0207664_10006657 3300025929 Bacteria 7964
113 Ga0207664_10061142 3300025929 Bacteria 3004
114 Ga0207690_10000346 3300025932 Bacteria 30899
115 Ga0207704_10034308 3300025938 Bacteria 2894
116 Ga0207665_10000929 3300025939 Bacteria 19812
117 Ga0207665_10004518 3300025939 Bacteria 9227
118 Ga0207665_10009626 3300025939 Bacteria 6346
119 Ga0207711_10031340 3300025941 Bacteria 4487
120 Ga0207661_10056539 3300025944 Bacteria 3150
121 Ga0207678_10001413 3300026067 Bacteria 22041
122 Ga0207678_10015568 3300026067 Bacteria 6687
123 Ga0207708_10004677 3300026075 Bacteria 10069
124 Ga0207702_10019009 3300026078 Bacteria 5685
125 Ga0207702_10099368 3300026078 Bacteria 2565
126 Ga0207676_10024983 3300026095 Bacteria 4429
127 Ga0207674_10008612 3300026116 Bacteria 11759
128 Ga0207683_10004533 3300026121 Bacteria 11975
129 Ga0268266_10039708 3300028379 Bacteria 4009
130 Ga0265336_10006436 3300028666 Bacteria 4232
131 Ga0265338_10000596 3300028800 Bacteria 63688
132 Ga0307508_10012729 3300031616 Bacteria 7693
133 Ga0307508_10044594 3300031616 Bacteria 3965
134 Ga0373926_0000360 3300035083 Bacteria 11581
135 Ga0373926_0007973 3300035083 Bacteria 3528
136 Ga0373926_0016156 3300035083 Bacteria 2550
137 Ga0373928_0005335 3300035084 Bacteria 2455
138 Ga0373934_0000053 3300035086 Bacteria 39071
139 Ga0373944_0003727 3300035089 Bacteria 3938
140 Ga0373923_0010791 3300035111 Bacteria 3334
141 Ga0373936_0000384 3300035113 Bacteria 15010
142 Ga0373936_0022266 3300035113 Bacteria 2467
143 Ga0373945_0000075 3300035116 Bacteria 22557
144 Ga0373945_0000414 3300035116 Bacteria 12175
145 Ga0373953_0000470 3300035117 Bacteria 11115
146 Ga0373953_0021754 3300035117 Bacteria 2410
147 Ga0373956_0000325 3300035119 Bacteria 19198
148 Ga0373956_0002679 3300035119 Bacteria 7205
149 Ga0373956_0004267 3300035119 Bacteria 5745
150 Ga0373956_0004991 3300035119 Bacteria 5316
151 Ga0373956_0015660 3300035119 Bacteria 3177
152 Ga0373957_0000015 3300035120 Bacteria 43575
153 Ga0373957_0016187 3300035120 Bacteria 2578
154 Ga0373943_0000403 3300035170 Bacteria 18117
155 Ga0373943_0002115 3300035170 Bacteria 9026
156 Ga0373946_0000652 3300035171 Bacteria 11637
157 Ga0373946_0002223 3300035171 Bacteria 6842
158 Ga0373955_0000027 3300035172 Bacteria 58251
159 Ga0373955_0059957 3300035172 Bacteria 2097
160 Ga0373961_0006530 3300035241 Bacteria 2802
161 Ga0373924_0002181 3300035410 Bacteria 6557
162 Ga0373924_0005311 3300035410 Bacteria 4555
163 Ga0373931_0008381 3300035691 Bacteria 4900
164 Ga0373935_0000295 3300035692 Bacteria 24677
165 Ga0373935_0001063 3300035692 Bacteria 14965
166 Ga0373935_0039862 3300035692 Bacteria 2945
167 Ga0373927_0001319 3300035695 Bacteria 18747
168 Ga0373927_0013764 3300035695 Bacteria 5369
169 Ga0373933_0000025 3300035724 Bacteria 90735
170 Ga0373947_0000004 3300035725 Bacteria 248228
171 Ga0373947_0000444 3300035725 Bacteria 23515
172 Ga0373937_0000034 3300036401 Bacteria 116552
173 Ga0373937_0165188 3300036401 Bacteria 2075
174 Ga0372808_000137 3300036459 Bacteria 4037
175 Ga0373925_0002171 3300037068 Bacteria 15985
176 Ga0373925_0005928 3300037068 Bacteria 9056
177 Ga0373925_0012791 3300037068 Bacteria 6078
178 Ga0373925_0027210 3300037068 Bacteria 4187
179 Ga0373925_0028803 3300037068 Bacteria 4071
180 Ga0436364_0090078 3300037853 Bacteria 2947
181 Ga0436364_0395778 3300037853 Bacteria 30492
182 Ga0436364_0502444 3300037853 Bacteria 31198
183 Ga0436364_0720930 3300037853 Bacteria 12667
184 Ga0436364_1205714 3300037853 Bacteria 2654
185 Ga0436364_1457394 3300037853 Bacteria 6490
186 Ga0395901_0012973 3300038443 Bacteria 8456
187 Ga0466965_0011562 3300044683 Bacteria 4139
188 Ga0466966_0010046 3300044684 Bacteria 6274
189 Ga0466961_0010678 3300044693 Bacteria 5864
190 Ga0466961_0011970 3300044693 Bacteria 5545
191 Ga0466961_0022519 3300044693 Bacteria 4053
192 Ga0466961_0060690 3300044693 Bacteria 2404
193 Ga0466963_0008374 3300044694 Bacteria 6197
194 Ga0466963_0011189 3300044694 Bacteria 5460
195 Ga0466963_0013944 3300044694 Bacteria 4949
196 Ga0466963_0015217 3300044694 Bacteria 4759
197 Ga0466963_0024066 3300044694 Bacteria 3874
198 Ga0466963_0043539 3300044694 Bacteria 2952
199 Ga0466963_0070287 3300044694 Bacteria 2354
200 Ga0466964_0001149 3300044706 Bacteria 8941
201 Ga0466971_0015753 3300044719 Bacteria 3330
202 Ga0466957_0009180 3300044842 Bacteria 5641
203 Ga0466957_0041622 3300044842 Bacteria 2778
204 Ga0466958_0027766 3300045836 Bacteria 3350
205 Ga0466967_0002383 3300045976 Bacteria 11648
206 Ga0466967_0006404 3300045976 Bacteria 8323
207 Ga0466967_0012209 3300045976 Bacteria 6557
208 Ga0466967_0059285 3300045976 Bacteria 3387
209 Ga0466967_0102466 3300045976 Bacteria 2619
210 Ga0466967_0165428 3300045976 Bacteria 2078
211 Ga0495592_0000016 3300046454 Bacteria 144922
212 Ga0495592_0050592 3300046454 Bacteria 3087
213 Ga0495603_0053445 3300046455 Bacteria 2396
214 Ga0495629_0010407 3300046459 Bacteria 6768
215 Ga0495641_0005722 3300046461 Bacteria 8267
216 Ga0495641_0005832 3300046461 Bacteria 8161
217 Ga0495651_0000005 3300046462 Bacteria 173396
218 Ga0495651_0004700 3300046462 Bacteria 10451
219 Ga0495651_0006810 3300046462 Bacteria 8731
220 Ga0495651_0029136 3300046462 Bacteria 4305
221 Ga0495651_0043684 3300046462 Bacteria 3476
222 Ga0495651_0085228 3300046462 Bacteria 2379
223 Ga0495653_0001819 3300046463 Bacteria 16822
224 Ga0495653_0002589 3300046463 Bacteria 14397
225 Ga0495653_0081200 3300046463 Bacteria 2396
226 Ga0495580_0027733 3300046472 Bacteria 4119
227 Ga0495582_0028522 3300046473 Bacteria 3063
228 Ga0495582_0072711 3300046473 Bacteria 1903
229 Ga0495662_0002423 3300046476 Bacteria 9370
230 Ga0495664_0001359 3300046477 Bacteria 12905
231 Ga0495664_0006042 3300046477 Bacteria 6675
232 Ga0495664_0015654 3300046477 Bacteria 4314
233 Ga0495594_0005466 3300046499 Bacteria 6532
234 Ga0495608_0000057 3300046511 Bacteria 90735
235 Ga0495608_0024332 3300046511 Bacteria 4142
236 Ga0495608_0034861 3300046511 Bacteria 3397
237 Ga0495618_0006272 3300046514 Bacteria 7218
238 Ga0495628_0000073 3300046516 Bacteria 79628
239 Ga0495628_0020229 3300046516 Bacteria 5493
240 Ga0495628_0090337 3300046516 Bacteria 2371
241 Ga0495630_0006137 3300046517 Bacteria 8520
242 Ga0495630_0022159 3300046517 Bacteria 4693
243 Ga0495630_0032312 3300046517 Bacteria 3899
244 Ga0495666_0004711 3300046526 Bacteria 6899
245 Ga0495652_0000054 3300046529 Bacteria 116611
246 Ga0495652_0037423 3300046529 Bacteria 4210
247 Ga0495652_0048833 3300046529 Bacteria 3624
248 Ga0495652_0146093 3300046529 Bacteria 1853
249 Ga0495665_0015217 3300046531 Bacteria 4145
250 Ga0495665_0021404 3300046531 Bacteria 3474
251 Ga0495665_0063859 3300046531 Bacteria 1943
252 Ga0495640_0050237 3300046533 Bacteria 2874
253 Ga0495640_0054128 3300046533 Bacteria 2750
254 Ga0495586_0018392 3300046535 Bacteria 3720
255 Ga0495587_0000030 3300046536 Bacteria 135844
256 Ga0495587_0006967 3300046536 Bacteria 7340
257 Ga0495587_0007033 3300046536 Bacteria 7304
258 Ga0495587_0016858 3300046536 Bacteria 4543
259 Ga0495645_0131370 3300046543 Bacteria 1754
260 Ga0495667_0000025 3300046559 Bacteria 155090
261 Ga0495667_0002949 3300046559 Bacteria 11414
262 Ga0495667_0006594 3300046559 Bacteria 7880
263 Ga0495667_0012776 3300046559 Bacteria 5689
264 Ga0495667_0040929 3300046559 Bacteria 3074
265 Ga0495634_0006938 3300046642 Bacteria 8553
266 Ga0495634_0016534 3300046642 Bacteria 5274
267 Ga0495635_0009745 3300046663 Bacteria 6713
268 Ga0495635_0015251 3300046663 Bacteria 5376
269 Ga0495635_0019214 3300046663 Bacteria 4767
270 Ga0495635_0027029 3300046663 Bacteria 3991
271 Ga0495657_0000018 3300046675 Bacteria 173397
272 Ga0495657_0005226 3300046675 Bacteria 10278
273 Ga0495657_0017557 3300046675 Bacteria 5192
274 Ga0495657_0019185 3300046675 Bacteria 4936
275 Ga0495599_0000054 3300046678 Bacteria 79938
276 Ga0495599_0054666 3300046678 Bacteria 2501
277 Ga0495623_0003597 3300046679 Bacteria 10252
278 Ga0495646_0000719 3300046680 Bacteria 18344
279 Ga0495647_0005473 3300046681 Bacteria 4160
280 Ga0495624_0014168 3300046690 Bacteria 5419
281 Ga0495600_0011025 3300046809 Bacteria 5624
282 Ga0495581_0006085 3300047315 Bacteria 6996
283 Ga0495604_0000066 3300047317 Bacteria 90720
284 Ga0495604_0089488 3300047317 Bacteria 2288
285 Ga0495674_0000136 3300047319 Bacteria 56284
286 Ga0495674_0001743 3300047319 Bacteria 21400
287 Ga0495674_0012509 3300047319 Bacteria 7994
288 Ga0495674_0041681 3300047319 Bacteria 4099
289 Ga0495674_0079318 3300047319 Bacteria 2819
290 Ga0495674_0101951 3300047319 Bacteria 2441
291 Ga0495676_0001632 3300047321 Bacteria 19520
292 Ga0495676_0007633 3300047321 Bacteria 9918
293 Ga0495680_0000032 3300047322 Bacteria 108460
294 Ga0495680_0003683 3300047322 Bacteria 14969
295 Ga0495680_0008439 3300047322 Bacteria 9362
296 Ga0495680_0012027 3300047322 Bacteria 7636
297 Ga0495680_0022315 3300047322 Bacteria 5278
298 Ga0495680_0035956 3300047322 Bacteria 3982
299 Ga0495680_0043617 3300047322 Bacteria 3549
300 Ga0495675_0000334 3300047444 Bacteria 33190
301 Ga0495675_0006602 3300047444 Bacteria 7103
302 Ga0495684_0002859 3300047471 Bacteria 13589
303 Ga0495684_0003496 3300047471 Bacteria 12290
304 Ga0495684_0004756 3300047471 Bacteria 10608
305 Ga0495684_0031392 3300047471 Bacteria 4078
306 Ga0495684_0032256 3300047471 Bacteria 4020
307 Ga0495684_0045252 3300047471 Bacteria 3368
308 Ga0495593_0012703 3300047673 Bacteria 4808
309 Ga0495602_0000123 3300048088 Bacteria 72994
310 Ga0495602_0072483 3300048088 Bacteria 2936
311 Ga0495602_0091358 3300048088 Bacteria 2525
312 Ga0496101_0026467 3300048904 Bacteria 4033
313 Ga0496102_0000013 3300048905 Bacteria 311668
314 Ga0496102_0138675 3300048905 Bacteria 2279
315 Ga0496103_0000231 3300048906 Bacteria 54600
316 Ga0496103_0009109 3300048906 Bacteria 5878
317 Ga0496104_0000379 3300048907 Bacteria 39343
318 Ga0496104_0004919 3300048907 Bacteria 11654
319 Ga0496104_0009929 3300048907 Bacteria 8499
320 Ga0496104_0067102 3300048907 Bacteria 3407
321 Ga0496105_0001710 3300048908 Bacteria 15668
322 Ga0496105_0038006 3300048908 Bacteria 3965
323 Ga0496105_0038629 3300048908 Bacteria 3933
324 Ga0496108_0004987 3300048911 Bacteria 10729
325 Ga0496108_0045178 3300048911 Bacteria 3678
326 Ga0496109_0010124 3300048912 Bacteria 8044
327 Ga0496109_0097599 3300048912 Bacteria 2723
328 Ga0496109_0123881 3300048912 Bacteria 2409
329 Ga0496110_0056052 3300048913 Bacteria 3468
330 Ga0496111_0014171 3300048914 Bacteria 5440
331 Ga0496111_0041797 3300048914 Bacteria 3291
332 Ga0496112_0001030 3300048915 Bacteria 20510
333 Ga0496112_0001844 3300048915 Bacteria 16681
334 Ga0496112_0054860 3300048915 Bacteria 3916
335 Ga0496113_0058879 3300048916 Bacteria 2892
336 Ga0496115_0014147 3300048918 Bacteria 6037
337 Ga0496118_0015703 3300048921 Bacteria 6992
338 Ga0496119_0000276 3300048922 Bacteria 72490
339 Ga0496119_0064513 3300048922 Bacteria 2174
340 Ga0496121_0010804 3300048924 Bacteria 10228
341 Ga0496126_0015395 3300048929 Bacteria 7694
342 Ga0496126_0042071 3300048929 Bacteria 4222
343 Ga0501042_0005851 3300049578 Bacteria 7946
344 nmdc:mga05p37_108218_c1 3300050507 Bacteria 3420
345 nmdc:mga08x19_29601_c1 3300050514 Bacteria 3435
346 Ga0495612_0009490 3300053078 Bacteria 3946
347 Ga0466962_0001350 3300061719 Bacteria 11344
348 Ga0466962_0022980 3300061719 Bacteria 2997
349 Ga0070714_100030652
350 Ga0070658_10004900
351 Ga0070658_10014140
352 Ga0070658_10133731
353 Ga0070683_100065618
354 Ga0070666_10052714
355 Ga0070680_100001649
356 Ga0070680_100005131
357 Ga0070680_100050960
358 Ga0070682_100053016
359 Ga0070659_100000331
360 Ga0070714_100000680
361 Ga0070714_100002589
362 Ga0070713_100091581
363 Ga0070711_100030894
364 Ga0070705_100042480
365 Ga0070708_100068401
366 Ga0070663_100007074
367 Ga0070681_10000025
368 Ga0070681_10027151
369 Ga0070706_100004389
370 Ga0070706_100025796
371 Ga0070707_100004574
372 Ga0070707_100049189
373 Ga0070707_100058245
374 Ga0070698_100000057
375 Ga0070698_100001287
376 Ga0070698_100002969
377 Ga0070698_100007877
378 Ga0070698_100007905
379 Ga0070679_100000071
380 Ga0070679_100029675
381 Ga0070679_100033070
382 Ga0070684_100026322
383 Ga0070684_100069621
384 Ga0070665_100041739
385 Ga0068855_100111767
386 Ga0070664_100031979
387 Ga0068856_100084696
388 Ga0068852_100050758
389 Ga0068859_100000488
390 Ga0068864_100019349
391 Ga0068864_100057304
392 Ga0081540_1000151
393 Ga0081540_1004184
394 Ga0070717_10002789
395 Ga0070717_10003201
396 Ga0070717_10006461
397 Ga0070717_10028131
398 Ga0070717_10066927
399 Ga0070716_100001145
400 Ga0070716_100005427
401 Ga0070716_100005935
402 Ga0068871_100107222
403 Ga0097620_100000488
404 Ga0111539_10118182
405 Ga0105247_10007069
406 Ga0114129_10006397
407 Ga0105238_10048939
408 Ga0105246_10015547
409 Ga0157369_10001126
410 Ga0157374_10075486
411 Ga0163162_10058387
412 Ga0163163_10012357
413 Ga0163163_10020338
414 Ga0157379_10004765
415 Ga0157376_10044587
416 Ga0197907_11016726
417 Ga0206351_10519679
418 Ga0206350_11137108
419 Ga0206354_10746971
420 Ga0206353_11506991
421 Ga0213875_10000727
422 Ga0213875_10002626
423 Ga0213875_10002831
424 Ga0224712_10002274
425 Ga0207426_1006820
426 Ga0207692_10016950
427 Ga0207710_10004755
428 Ga0207688_10005682
429 Ga0207699_10002468
430 Ga0207699_10006022
431 Ga0207699_10007800
432 Ga0207699_10014417
433 Ga0207705_10001134
434 Ga0207705_10004403
435 Ga0207684_10000495
436 Ga0207684_10002613
437 Ga0207684_10021865
438 Ga0207707_10000023
439 Ga0207707_10002917
440 Ga0207707_10027524
441 Ga0207693_10021320
442 Ga0207693_10036426
443 Ga0207663_10004555
444 Ga0207663_10006664
445 Ga0207663_10045323
446 Ga0207660_10001619
447 Ga0207660_10010837
448 Ga0207660_10030545
449 Ga0207662_10004308
450 Ga0207657_10008933
451 Ga0207657_10027975
452 Ga0207652_10000039
453 Ga0207652_10000618
454 Ga0207646_10001307
455 Ga0207646_10005205
456 Ga0207646_10032421
457 Ga0207700_10002040
458 Ga0207664_10000917
459 Ga0207664_10001098
460 Ga0207664_10006657
461 Ga0207664_10061142
462 Ga0207690_10000346
463 Ga0207704_10034308
464 Ga0207665_10000929
465 Ga0207665_10004518
466 Ga0207665_10009626
467 Ga0207711_10031340
468 Ga0207661_10056539
469 Ga0207678_10001413
470 Ga0207678_10015568
471 Ga0207708_10004677
472 Ga0207702_10019009
473 Ga0207702_10099368
474 Ga0207676_10024983
475 Ga0207674_10008612
476 Ga0207683_10004533
477 Ga0268266_10039708
478 Ga0265336_10006436
479 Ga0265338_10000596
480 Ga0307508_10012729
481 Ga0307508_10044594
482 Ga0373926_0000360
483 Ga0373926_0007973
484 Ga0373926_0016156
485 Ga0373928_0005335
486 Ga0373934_0000053
487 Ga0373944_0003727
488 Ga0373923_0010791
489 Ga0373936_0000384
490 Ga0373936_0022266
491 Ga0373945_0000075
492 Ga0373945_0000414
493 Ga0373953_0000470
494 Ga0373953_0021754
495 Ga0373956_0000325
496 Ga0373956_0002679
497 Ga0373956_0004267
498 Ga0373956_0004991
499 Ga0373956_0015660
500 Ga0373957_0000015
501 Ga0373957_0016187
502 Ga0373943_0000403
503 Ga0373943_0002115
504 Ga0373946_0000652
505 Ga0373946_0002223
506 Ga0373955_0000027
507 Ga0373955_0059957
508 Ga0373961_0006530
509 Ga0373924_0002181
510 Ga0373924_0005311
511 Ga0373931_0008381
512 Ga0373935_0000295
513 Ga0373935_0001063
514 Ga0373935_0039862
515 Ga0373927_0001319
516 Ga0373927_0013764
517 Ga0373933_0000025
518 Ga0373947_0000004
519 Ga0373947_0000444
520 Ga0373937_0000034
521 Ga0373937_0165188
522 Ga0372808_000137
523 Ga0373925_0002171
524 Ga0373925_0005928
525 Ga0373925_0012791
526 Ga0373925_0027210
527 Ga0373925_0028803
528 Ga0436364_0090078
529 Ga0436364_0395778
530 Ga0436364_0502444
531 Ga0436364_0720930
532 Ga0436364_1205714
533 Ga0436364_1457394
534 Ga0395901_0012973
535 Ga0466965_0011562
536 Ga0466966_0010046
537 Ga0466961_0010678
538 Ga0466961_0011970
539 Ga0466961_0022519
540 Ga0466961_0060690
541 Ga0466963_0008374
542 Ga0466963_0011189
543 Ga0466963_0013944
544 Ga0466963_0015217
545 Ga0466963_0024066
546 Ga0466963_0043539
547 Ga0466963_0070287
548 Ga0466964_0001149
549 Ga0466971_0015753
550 Ga0466957_0009180
551 Ga0466957_0041622
552 Ga0466958_0027766
553 Ga0466967_0002383
554 Ga0466967_0006404
555 Ga0466967_0012209
556 Ga0466967_0059285
557 Ga0466967_0102466
558 Ga0466967_0165428
559 Ga0495592_0000016
560 Ga0495592_0050592
561 Ga0495603_0053445
562 Ga0495629_0010407
563 Ga0495641_0005722
564 Ga0495641_0005832
565 Ga0495651_0000005
566 Ga0495651_0004700
567 Ga0495651_0006810
568 Ga0495651_0029136
569 Ga0495651_0043684
570 Ga0495651_0085228
571 Ga0495653_0001819
572 Ga0495653_0002589
573 Ga0495653_0081200
574 Ga0495580_0027733
575 Ga0495582_0028522
576 Ga0495582_0072711
577 Ga0495662_0002423
578 Ga0495664_0001359
579 Ga0495664_0006042
580 Ga0495664_0015654
581 Ga0495594_0005466
582 Ga0495608_0000057
583 Ga0495608_0024332
584 Ga0495608_0034861
585 Ga0495618_0006272
586 Ga0495628_0000073
587 Ga0495628_0020229
588 Ga0495628_0090337
589 Ga0495630_0006137
590 Ga0495630_0022159
591 Ga0495630_0032312
592 Ga0495666_0004711
593 Ga0495652_0000054
594 Ga0495652_0037423
595 Ga0495652_0048833
596 Ga0495652_0146093
597 Ga0495665_0015217
598 Ga0495665_0021404
599 Ga0495665_0063859
600 Ga0495640_0050237
601 Ga0495640_0054128
602 Ga0495586_0018392
603 Ga0495587_0000030
604 Ga0495587_0006967
605 Ga0495587_0007033
606 Ga0495587_0016858
607 Ga0495645_0131370
608 Ga0495667_0000025
609 Ga0495667_0002949
610 Ga0495667_0006594
611 Ga0495667_0012776
612 Ga0495667_0040929
613 Ga0495634_0006938
614 Ga0495634_0016534
615 Ga0495635_0009745
616 Ga0495635_0015251
617 Ga0495635_0019214
618 Ga0495635_0027029
619 Ga0495657_0000018
620 Ga0495657_0005226
621 Ga0495657_0017557
622 Ga0495657_0019185
623 Ga0495599_0000054
624 Ga0495599_0054666
625 Ga0495623_0003597
626 Ga0495646_0000719
627 Ga0495647_0005473
628 Ga0495624_0014168
629 Ga0495600_0011025
630 Ga0495581_0006085
631 Ga0495604_0000066
632 Ga0495604_0089488
633 Ga0495674_0000136
634 Ga0495674_0001743
635 Ga0495674_0012509
636 Ga0495674_0041681
637 Ga0495674_0079318
638 Ga0495674_0101951
639 Ga0495676_0001632
640 Ga0495676_0007633
641 Ga0495680_0000032
642 Ga0495680_0003683
643 Ga0495680_0008439
644 Ga0495680_0012027
645 Ga0495680_0022315
646 Ga0495680_0035956
647 Ga0495680_0043617
648 Ga0495675_0000334
649 Ga0495675_0006602
650 Ga0495684_0002859
651 Ga0495684_0003496
652 Ga0495684_0004756
653 Ga0495684_0031392
654 Ga0495684_0032256
655 Ga0495684_0045252
656 Ga0495593_0012703
657 Ga0495602_0000123
658 Ga0495602_0072483
659 Ga0495602_0091358
660 Ga0496101_0026467
661 Ga0496102_0000013
662 Ga0496102_0138675
663 Ga0496103_0000231
664 Ga0496103_0009109
665 Ga0496104_0000379
666 Ga0496104_0004919
667 Ga0496104_0009929
668 Ga0496104_0067102
669 Ga0496105_0001710
670 Ga0496105_0038006
671 Ga0496105_0038629
672 Ga0496108_0004987
673 Ga0496108_0045178
674 Ga0496109_0010124
675 Ga0496109_0097599
676 Ga0496109_0123881
677 Ga0496110_0056052
678 Ga0496111_0014171
679 Ga0496111_0041797
680 Ga0496112_0001030
681 Ga0496112_0001844
682 Ga0496112_0054860
683 Ga0496113_0058879
684 Ga0496115_0014147
685 Ga0496118_0015703
686 Ga0496119_0000276
687 Ga0496119_0064513
688 Ga0496121_0010804
689 Ga0496126_0015395
690 Ga0496126_0042071
691 Ga0501042_0005851
692 nmdc:mga05p37_108218_c1
693 nmdc:mga08x19_29601_c1
694 Ga0495612_0009490
695 Ga0466962_0001350
696 Ga0466962_0022980

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13243

SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

594

694

0.95

PF13249

SQHop_cyclase_N

Squalene-hopene cyclase N-terminal domain

20

247

0.95

PF13243

SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

372

467

0.94

PF13243

SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

477

599

0.94

PF13249

SQHop_cyclase_N

Squalene-hopene cyclase N-terminal domain

258

360

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2sqc-assembly1.cif.gz_A squalene-hopene cyclase from alicyclobacillus acidocaldarius 0.9371 13 589
3sqc-assembly3.cif.gz_C squalene-hopene cyclase 0.9369 17 589
1gsz-assembly1.cif.gz_A crystal structure of a squalene cyclase in complex with the potential anticholesteremic drug ro48-8071 0.9179 18 589
2sqc-assembly1.cif.gz_A squalene-hopene cyclase from alicyclobacillus acidocaldarius 0.9138 13 589
3sqc-assembly3.cif.gz_C squalene-hopene cyclase 0.9075 17 589
ID Description Score Start End Superfamily
1h35A01 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9349 316 589 1.50.10.20
1gszB02 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.882 43 312 1.50.10.20
af_A0A1D6IYU4_123_320_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8807 44 195 1.50.10.20
af_A0A1D6KEK0_123_260_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8741 44 167 1.50.10.20
1gszB02 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8727 43 312 1.50.10.20
ID Description Score Start End GO Terms
AF-A0A7K3H9F5-F1-model_v4 Squalene--hopene cyclase 0.9724 27 202 GO:0005811
GO:0016104
GO:0016866
AF-A0A382B123-F1-model_v4 Squalene cyclase N-terminal domain-containing protein 0.968 13 187 GO:0005811
GO:0016104
GO:0016866
AF-A0A533YPU2-F1-model_v4 Squalene--hopene cyclase 0.9679 52 161 GO:0005811
GO:0016104
GO:0016866
AF-A0A352UAU8-F1-model_v4 Squalene cyclase N-terminal domain-containing protein 0.9662 16 182 GO:0005811
GO:0016104
GO:0016866
AF-A0A2S6ARU0-F1-model_v4 Squalene--hopene cyclase 0.964 14 588 GO:0005811
GO:0016104
GO:0016866

Map