F417456

General Info

Members Datasets Scaffolds Average Seq Length
348 234 327 295

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100381652|Ga0070697_1003816521
Length 357
Sequence LSVGKSGRFSPDLKREFECGWAAGEVSRFLLISDYRLRPYAHRSDGLAKCSPVPYNPADLRITFPEAIDQFILYLATERGLSENYQLSTRRSLEEFAERISKERNGPDEIKIDDLTSYLAQRKTAGLAPASLKLIVVALKIFFRFLNTRKMISNDPAEVLVLPRLTRYLPETLNELEVSQLLSVDLKSRAFPLRDRAMLELLYASGLRISELAHARLEHLNLEERFIRVVGKGNKTRIIPVGREACQAIGRYLTAERPALVGRRTGSEIFLARHGRRLTTQRVWQIVKEIAELGGFGMNIYPHLLRHSFATHLLSNGADLRIIQELLGHADISTTEVYTHVDQGRLKSIHRRFHPRG

Samples

Sample ID Description Type Environment
1 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
2 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
3 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
4 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
5 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
6 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
7 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
8 2858438669 Leuconostoc mesenteroides YL48 Isolate Unclassified
9 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
10 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
11 2928519762 Leuconostoc citreum 1377 Isolate Rhizosphere
12 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
13 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
14 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
15 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
16 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
17 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
18 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
19 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
20 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
21 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
22 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
23 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
24 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
30 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
31 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
32 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
35 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
36 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
37 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
38 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
39 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
40 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
44 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
45 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
46 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
47 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
52 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
53 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
54 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
55 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
56 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
57 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
58 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
59 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
60 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
61 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
62 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
63 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
64 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
65 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
66 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
67 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
68 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
69 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
70 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
71 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
72 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
73 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
74 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
75 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
76 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
77 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
78 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
79 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
80 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
81 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
82 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
83 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
84 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
85 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
86 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
87 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
88 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
89 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
90 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
91 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
92 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
93 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
94 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
95 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
96 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
97 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
98 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
99 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
100 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
101 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
102 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
103 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
104 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
105 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
139 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
140 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
141 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
143 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
145 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
149 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
150 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
151 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
152 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
153 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
154 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
155 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
156 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
157 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
158 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
159 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
160 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
161 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
162 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
163 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
164 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
165 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
166 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
167 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
168 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
169 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
170 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
171 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
172 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
173 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
174 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
175 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
176 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
177 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
178 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
179 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
180 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
181 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
182 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
183 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
184 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
185 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
186 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
187 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
188 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
189 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
190 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
199 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
200 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
202 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
204 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
205 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
206 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
207 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
208 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
209 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
210 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
211 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
212 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
213 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
214 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
215 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
216 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
217 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
218 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
219 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
220 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
221 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
222 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
223 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
224 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
225 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
226 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
227 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
228 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
229 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
230 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
231 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
232 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
233 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
234 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.68
Metatranscriptomes 0.29
Isolates 6.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.76
Nodule 0
Rhizoplane 2.3
Rhizosphere 84.48
Stem 0
Stem Tuber 0
Unclassified 5.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1001529 3300000549 Bacteria 3439
2 JGI25151J46595_10003375 3300003187 Bacteria 8841
3 Ga0065704_10104122 3300005289 Bacteria 2151
4 Ga0070676_10046743 3300005328 Bacteria 2525
5 Ga0070670_100003438 3300005331 Bacteria 13136
6 Ga0068869_100024293 3300005334 Bacteria 4197
7 Ga0070680_100000745 3300005336 Bacteria 22728
8 Ga0070682_100000164 3300005337 Bacteria 50996
9 Ga0070660_100004382 3300005339 Bacteria 9749
10 Ga0070660_100014990 3300005339 Bacteria 5590
11 Ga0070689_100057583 3300005340 Bacteria 3017
12 Ga0070691_10012183 3300005341 Bacteria 3938
13 Ga0070691_10050449 3300005341 Bacteria 1985
14 Ga0070687_100024981 3300005343 Bacteria 2861
15 Ga0070661_100007943 3300005344 Bacteria 7327
16 Ga0070659_100002021 3300005366 Bacteria 14499
17 Ga0070703_10006912 3300005406 Bacteria 3181
18 Ga0070703_10045534 3300005406 Bacteria 1384
19 Ga0070701_10154743 3300005438 Bacteria 1323
20 Ga0070705_100001669 3300005440 Bacteria 11613
21 Ga0070700_100125808 3300005441 Bacteria 1723
22 Ga0070694_100000153 3300005444 Bacteria 35445
23 Ga0070694_100015372 3300005444 Bacteria 4807
24 Ga0070694_100114932 3300005444 Bacteria 1922
25 Ga0070708_100025866 3300005445 Bacteria 5019
26 Ga0070708_100092259 3300005445 Bacteria 2759
27 Ga0070663_100007334 3300005455 Bacteria 6705
28 Ga0070662_100003134 3300005457 Bacteria 10271
29 Ga0070662_100170453 3300005457 Bacteria 1709
30 Ga0070681_10014008 3300005458 Bacteria 7980
31 Ga0068867_100008244 3300005459 Bacteria 7359
32 Ga0070706_100035998 3300005467 Bacteria 4571
33 Ga0070706_100321353 3300005467 Bacteria 1443
34 Ga0070707_100053316 3300005468 Bacteria 3877
35 Ga0070707_100055168 3300005468 Bacteria 3809
36 Ga0070707_100156839 3300005468 Unclassified 2217
37 Ga0070707_100267584 3300005468 Bacteria 1662
38 Ga0070707_100344999 3300005468 Bacteria 1446
39 Ga0070698_100004001 3300005471 Bacteria 16220
40 Ga0070698_100004747 3300005471 Bacteria 14929
41 Ga0070698_100007635 3300005471 Bacteria 11704
42 Ga0070699_100000261 3300005518 Bacteria 50921
43 Ga0070699_100015519 3300005518 Bacteria 6547
44 Ga0070699_100016796 3300005518 Bacteria 6284
45 Ga0070699_100023335 3300005518 Bacteria 5328
46 Ga0070699_100056849 3300005518 Bacteria 3388
47 Ga0070679_100000882 3300005530 Bacteria 26065
48 Ga0070697_100010096 3300005536 Bacteria 7364
49 Ga0070697_100036241 3300005536 Bacteria 3983
50 Ga0070697_100043616 3300005536 Bacteria 3633
51 Ga0070697_100381652 3300005536 Bacteria 1220
52 Ga0068853_100000028 3300005539 Bacteria 126479
53 Ga0068853_100000850 3300005539 Bacteria 21319
54 Ga0068853_100525263 3300005539 Bacteria 1119
55 Ga0070695_100002222 3300005545 Bacteria 11121
56 Ga0070695_100016734 3300005545 Bacteria 4441
57 Ga0070695_100115345 3300005545 Bacteria 1830
58 Ga0070696_100001217 3300005546 Bacteria 16726
59 Ga0070696_100020509 3300005546 Bacteria 4478
60 Ga0070696_100186104 3300005546 Bacteria 1543
61 Ga0070693_100000018 3300005547 Bacteria 62344
62 Ga0070693_100055468 3300005547 Bacteria 2283
63 Ga0070704_100002573 3300005549 Bacteria 10232
64 Ga0068855_100000233 3300005563 Bacteria 70757
65 Ga0070664_100001518 3300005564 Bacteria 18521
66 Ga0068857_100088024 3300005577 Bacteria 2778
67 Ga0068854_100000372 3300005578 Bacteria 28633
68 Ga0068856_100000806 3300005614 Bacteria 33848
69 Ga0070702_100003464 3300005615 Bacteria 7062
70 Ga0068852_100148826 3300005616 Bacteria 2175
71 Ga0068859_100003308 3300005617 Bacteria 16381
72 Ga0068864_100008738 3300005618 Bacteria 8355
73 Ga0068861_100001947 3300005719 Bacteria 13314
74 Ga0068861_100008222 3300005719 Bacteria 7179
75 Ga0068870_10000059 3300005840 Bacteria 34564
76 Ga0068863_100045572 3300005841 Bacteria 4161
77 Ga0068858_100556868 3300005842 Bacteria 1110
78 Ga0068860_100056005 3300005843 Bacteria 3749
79 Ga0068860_100144889 3300005843 Bacteria 2285
80 Ga0068862_100010244 3300005844 Bacteria 7736
81 Ga0068862_100161898 3300005844 Bacteria 1998
82 Ga0081455_10001913 3300005937 Bacteria 25012
83 Ga0081538_10011695 3300005981 Bacteria 7091
84 Ga0075365_10005394 3300006038 Bacteria 6891
85 Ga0075365_10007954 3300006038 Bacteria 5980
86 Ga0075365_10056227 3300006038 Bacteria 2615
87 Ga0075363_100027895 3300006048 Bacteria 2899
88 Ga0075363_100044778 3300006048 Bacteria 2345
89 Ga0075364_10004108 3300006051 Bacteria 8353
90 Ga0075364_10095619 3300006051 Bacteria 1975
91 Ga0070716_100000002 3300006173 Bacteria 396037
92 Ga0070716_100003556 3300006173 Bacteria 7354
93 Ga0070712_100133744 3300006175 Bacteria 1883
94 Ga0075362_10000127 3300006177 Bacteria 21098
95 Ga0075362_10009115 3300006177 Bacteria 3822
96 Ga0075367_10056471 3300006178 Bacteria 2332
97 Ga0075366_10007265 3300006195 Bacteria 6107
98 Ga0075370_10082875 3300006353 Bacteria 1845
99 Ga0075370_10100829 3300006353 Bacteria 1671
100 Ga0075370_10102179 3300006353 Bacteria 1660
101 Ga0068871_100289670 3300006358 Unclassified 1434
102 Ga0075428_100061787 3300006844 Bacteria 4103
103 Ga0075430_100377648 3300006846 Bacteria 1170
104 Ga0075431_100000072 3300006847 Bacteria 58754
105 Ga0075431_100153436 3300006847 Bacteria 2371
106 Ga0075433_10027525 3300006852 Bacteria 4823
107 Ga0075433_10034194 3300006852 Bacteria 4363
108 Ga0075436_100000109 3300006914 Bacteria 48509
109 Ga0097620_100003308 3300006931 Bacteria 16381
110 Ga0075435_100000700 3300007076 Bacteria 20781
111 Ga0075435_100047596 3300007076 Bacteria 3443
112 Ga0099795_10105346 3300007788 Viruses 1111
113 Ga0105245_10151536 3300009098 Bacteria 2193
114 Ga0114129_10071287 3300009147 Bacteria 4845
115 Ga0114129_10459647 3300009147 Bacteria 1668
116 Ga0105243_10080922 3300009148 Bacteria 2651
117 Ga0105243_10214733 3300009148 Bacteria 1696
118 Ga0105241_10024063 3300009174 Bacteria 4522
119 Ga0105239_10700044 3300010375 Bacteria 1158
120 Ga0157373_10000292 3300013100 Bacteria 40273
121 Ga0157371_10218441 3300013102 Bacteria 1369
122 Ga0157369_10012416 3300013105 Bacteria 9668
123 Ga0157378_10318554 3300013297 Bacteria 1510
124 Ga0163162_10478146 3300013306 Bacteria 1377
125 Ga0157372_10001109 3300013307 Bacteria 29268
126 Ga0157375_10080759 3300013308 Bacteria 3291
127 Ga0157375_10857597 3300013308 Bacteria 1054
128 Ga0163163_10027862 3300014325 Bacteria 5417
129 Ga0157380_10071437 3300014326 Bacteria 2807
130 Ga0157376_10333428 3300014969 Bacteria 1446
131 Ga0209050_1002201 3300025298 Bacteria 17559
132 Ga0207653_10004027 3300025885 Bacteria 4624
133 Ga0207699_10082681 3300025906 Bacteria 1995
134 Ga0207645_10004732 3300025907 Bacteria 10018
135 Ga0207643_10000105 3300025908 Bacteria 57132
136 Ga0207684_10000782 3300025910 Bacteria 36914
137 Ga0207684_10013311 3300025910 Bacteria 7116
138 Ga0207684_10066959 3300025910 Bacteria 3051
139 Ga0207684_10312912 3300025910 Unclassified 1354
140 Ga0207654_10006377 3300025911 Bacteria 5934
141 Ga0207707_10000034 3300025912 Bacteria 152677
142 Ga0207693_10033253 3300025915 Bacteria 4070
143 Ga0207693_10248490 3300025915 Bacteria 1396
144 Ga0207663_10318793 3300025916 Bacteria 1167
145 Ga0207660_10001489 3300025917 Bacteria 15764
146 Ga0207662_10001268 3300025918 Bacteria 12147
147 Ga0207657_10000066 3300025919 Bacteria 98663
148 Ga0207649_10009553 3300025920 Bacteria 5311
149 Ga0207652_10000740 3300025921 Bacteria 31505
150 Ga0207646_10000819 3300025922 Bacteria 40434
151 Ga0207646_10040622 3300025922 Bacteria 4183
152 Ga0207646_10046936 3300025922 Bacteria 3875
153 Ga0207646_10099807 3300025922 Bacteria 2602
154 Ga0207646_10221373 3300025922 Unclassified 1710
155 Ga0207646_10270388 3300025922 Bacteria 1536
156 Ga0207690_10120857 3300025932 Bacteria 1902
157 Ga0207706_10205227 3300025933 Bacteria 1728
158 Ga0207709_10018843 3300025935 Bacteria 3871
159 Ga0207709_10159138 3300025935 Bacteria 1573
160 Ga0207665_10006659 3300025939 Bacteria 7665
161 Ga0207665_10149810 3300025939 Unclassified 1670
162 Ga0207691_10031579 3300025940 Bacteria 4942
163 Ga0207689_10000365 3300025942 Bacteria 42716
164 Ga0207661_10532741 3300025944 Bacteria 1075
165 Ga0207679_10000248 3300025945 Bacteria 41174
166 Ga0207667_10013626 3300025949 Bacteria 9294
167 Ga0207639_10000070 3300026041 Bacteria 95428
168 Ga0207678_10015227 3300026067 Bacteria 6766
169 Ga0207708_10272907 3300026075 Bacteria 1368
170 Ga0207702_10002703 3300026078 Bacteria 16651
171 Ga0207641_10084905 3300026088 Bacteria 2757
172 Ga0207648_10000856 3300026089 Bacteria 34281
173 Ga0207674_10000050 3300026116 Bacteria 116782
174 Ga0207675_100004499 3300026118 Bacteria 13467
175 Ga0207675_100020817 3300026118 Bacteria 6115
176 Ga0209995_1000777 3300027471 Bacteria 4900
177 Ga0209968_1001016 3300027526 Bacteria 4315
178 Ga0209982_1000065 3300027552 Bacteria 10000
179 Ga0209970_1003511 3300027614 Bacteria 2629
180 Ga0209971_1000137 3300027682 Bacteria 21896
181 Ga0209966_1000071 3300027695 Bacteria 45482
182 Ga0209998_10000113 3300027717 Bacteria 32266
183 Ga0209974_10002561 3300027876 Bacteria 6600
184 Ga0268265_10022970 3300028380 Bacteria 4390
185 Ga0268264_10092875 3300028381 Bacteria 2606
186 Ga0265327_10000425 3300031251 Bacteria 77143
187 Ga0265316_10186882 3300031344 Bacteria 1541
188 Ga0307513_10000004 3300031456 Bacteria 558931
189 Ga0316579_10000317 3300031691 Bacteria 14936
190 Ga0316579_10127422 3300031691 Bacteria 1225
191 Ga0316578_10008573 3300031728 Bacteria 5212
192 Ga0316578_10227957 3300031728 Bacteria 1119
193 Ga0307516_10006430 3300031730 Bacteria 13763
194 Ga0316577_10000683 3300031733 Bacteria 14274
195 Ga0316577_10033646 3300031733 Bacteria 2864
196 Ga0307409_100043524 3300031995 Bacteria 3373
197 Ga0316583_10019466 3300032133 Bacteria 2436
198 Ga0316585_10043158 3300032137 Bacteria 1439
199 Ga0373948_0002452 3300034817 Bacteria 2744
200 Ga0373959_0006230 3300034820 Bacteria 1974
201 Ga0373951_0022032 3300035091 Bacteria 1465
202 Ga0373941_0018555 3300035115 Bacteria 1924
203 Ga0373960_0020543 3300035121 Bacteria 1747
204 Ga0373961_0001472 3300035241 Bacteria 6923
205 Ga0373962_0020279 3300035242 Bacteria 1745
206 Ga0316574_0020687 3300035398 Bacteria 3897
207 Ga0316574_0066461 3300035398 Bacteria 2272
208 Ga0316582_0002348 3300036647 Bacteria 8857
209 Ga0316582_0031943 3300036647 Bacteria 3222
210 Ga0316582_0066403 3300036647 Bacteria 2325
211 Ga0316584_0004990 3300036712 Bacteria 8841
212 Ga0316584_0193169 3300036712 Bacteria 1504
213 Ga0316584_0366986 3300036712 Bacteria 1031
214 Ga0316581_0000778 3300037588 Bacteria 6582
215 Ga0436360_0708693 3300039438 Bacteria 3349
216 Ga0436361_0007045 3300039447 Bacteria 1448
217 Ga0436361_0159744 3300039447 Bacteria 1715
218 Ga0436361_0369136 3300039447 Bacteria 9050
219 Ga0436361_0421799 3300039447 Bacteria 1984
220 Ga0436361_1159590 3300039447 Bacteria 1916
221 Ga0451795_1505400 3300041456 Bacteria 3872
222 Ga0451851_0574117 3300041507 Bacteria 1298
223 Ga0439448_0009360 3300042005 Bacteria 2887
224 Ga0439464_0007048 3300042439 Bacteria 2937
225 Ga0451577_0018759 3300042876 Bacteria 6365
226 Ga0451577_0069501 3300042876 Bacteria 3140
227 Ga0451577_0102584 3300042876 Bacteria 2556
228 Ga0453683_0009395 3300044673 Bacteria 6530
229 Ga0453683_0009438 3300044673 Bacteria 6508
230 Ga0453684_0006902 3300044712 Bacteria 21290
231 Ga0453684_0025747 3300044712 Bacteria 8530
232 Ga0466959_0126657 3300045049 Bacteria 1812
233 Ga0451576_0005487 3300045051 Bacteria 15871
234 Ga0451576_0049709 3300045051 Bacteria 4401
235 Ga0451576_0136480 3300045051 Bacteria 2558
236 Ga0466958_0316418 3300045836 Bacteria 1003
237 Ga0495585_0000068 3300046492 Bacteria 106866
238 Ga0495656_0078082 3300046615 Bacteria 1487
239 Ga0495672_0015535 3300047320 Bacteria 5164
240 Ga0496104_0002437 3300048907 Bacteria 16026
241 Ga0496107_0001005 3300048910 Bacteria 16847
242 Ga0496107_0270754 3300048910 Bacteria 1264
243 Ga0496108_0360554 3300048911 Bacteria 1269
244 Ga0496111_0126342 3300048914 Bacteria 1891
245 Ga0496112_0083916 3300048915 Bacteria 3151
246 Ga0496113_0037365 3300048916 Bacteria 3563
247 Ga0496116_0010632 3300048919 Bacteria 7694
248 Ga0496116_0031649 3300048919 Bacteria 3783
249 Ga0496116_0040596 3300048919 Bacteria 3203
250 Ga0496118_0000366 3300048921 Bacteria 76070
251 Ga0496119_0000122 3300048922 Bacteria 109048
252 Ga0496120_0000045 3300048923 Bacteria 191663
253 Ga0496123_0112976 3300048926 Bacteria 1548
254 Ga0496124_0002697 3300048927 Bacteria 22700
255 Ga0501312_020151 3300049528 Bacteria 985
256 Ga0501036_0352668 3300049572 Bacteria 1229
257 Ga0501039_0010429 3300049575 Bacteria 7081
258 Ga0501039_0243194 3300049575 Bacteria 1415
259 Ga0501040_0006389 3300049576 Bacteria 7651
260 Ga0501040_0019012 3300049576 Bacteria 4566
261 Ga0501040_0029949 3300049576 Bacteria 3674
262 Ga0501040_0040581 3300049576 Bacteria 3167
263 Ga0501040_0215967 3300049576 Bacteria 1364
264 Ga0501042_0001236 3300049578 Bacteria 14879
265 Ga0501042_0200748 3300049578 Bacteria 1438
266 Ga0501043_0188445 3300049579 Bacteria 1605
267 Ga0501043_0302796 3300049579 Bacteria 1221
268 Ga0501047_0017611 3300049581 Bacteria 6846
269 Ga0501068_0035040 3300049584 Bacteria 2995
270 Ga0501068_0134936 3300049584 Bacteria 1545
271 Ga0501071_0177055 3300049587 Bacteria 1597
272 Ga0501071_0400426 3300049587 Bacteria 1048
273 Ga0501072_0045232 3300049588 Bacteria 3461
274 Ga0501072_0121561 3300049588 Bacteria 2080
275 Ga0501074_0002500 3300049590 Bacteria 12812
276 Ga0501075_0036749 3300049591 Bacteria 3657
277 Ga0501075_0094806 3300049591 Bacteria 2265
278 Ga0501075_0338026 3300049591 Bacteria 1147
279 Ga0501076_0001404 3300049592 Bacteria 16137
280 Ga0501076_0017190 3300049592 Bacteria 5494
281 Ga0501076_0037737 3300049592 Bacteria 3791
282 Ga0501076_0219897 3300049592 Bacteria 1552
283 Ga0501077_0018720 3300049593 Bacteria 4381
284 Ga0501077_0080786 3300049593 Bacteria 2059
285 Ga0501077_0148741 3300049593 Bacteria 1486
286 Ga0501079_0007067 3300049741 Bacteria 8471
287 Ga0501079_0016240 3300049741 Bacteria 5690
288 Ga0501079_0065479 3300049741 Bacteria 2803
289 Ga0501079_0077825 3300049741 Bacteria 2565
290 Ga0501080_0026265 3300049742 Bacteria 5411
291 Ga0501081_0079303 3300049743 Bacteria 2296
292 Ga0501081_0088366 3300049743 Bacteria 2177
293 Ga0501081_0295022 3300049743 Bacteria 1189
294 Ga0501083_0016258 3300049744 Bacteria 5210
295 Ga0501045_0003188 3300049824 Bacteria 11220
296 Ga0501045_0056901 3300049824 Bacteria 2861
297 Ga0501045_0235258 3300049824 Bacteria 1364
298 Ga0501045_0372535 3300049824 Bacteria 1063
299 nmdc:mga03683_571_c1 3300050489 Bacteria 10574
300 nmdc:mga03n38_16897_c1 3300050490 Bacteria 2847
301 nmdc:mga0yw44_147489_c1 3300050492 Bacteria 1533
302 nmdc:mga07m45_44614_c1 3300050496 Bacteria 2488
303 nmdc:mga07m45_49071_c1 3300050496 Bacteria 2375
304 nmdc:mga05p37_114243_c1 3300050507 Bacteria 3319
305 nmdc:mga05p37_394854_c1 3300050507 Bacteria 1617
306 nmdc:mga06r32_202167_c1 3300050510 Bacteria 1974
307 nmdc:mga0rr50_281_c1 3300050513 Bacteria 27548
308 nmdc:mga0rr50_86956_c1 3300050513 Bacteria 2426
309 nmdc:mga08x19_44_c1 3300050514 Bacteria 147889
310 nmdc:mga0a205_8100_c1 3300050515 Bacteria 9550
311 Ga0500610_0008874 3300053079 Bacteria 4411
312 Ga0500651_0001519 3300053093 Bacteria 11727
313 Ga0500555_000351 3300053103 Bacteria 19483
314 Ga0500556_0000156 3300053104 Bacteria 57165
315 Ga0500616_0013525 3300053153 Bacteria 4735
316 Ga0500638_034719 3300053162 Bacteria 2442
317 Ga0501084_0000494 3300054114 Bacteria 30250
318 Ga0501084_0068054 3300054114 Bacteria 2981
319 Ga0501084_0410710 3300054114 Bacteria 1144
320 Ga0501082_0000376 3300060353 Bacteria 39540
321 Ga0501082_0149499 3300060353 Bacteria 2028
322 Ga0501082_0173573 3300060353 Bacteria 1874
323 Ga0530510_0000498 3300061734 Bacteria 24979
324 Ga0530510_0040418 3300061734 Bacteria 3365
325 Ga0530510_0043672 3300061734 Bacteria 3238
326 Ga0530510_0181845 3300061734 Bacteria 1559
327 Ga0530510_0259184 3300061734 Bacteria 1296

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036712 Ga0316584_0366986 Ga0316584_0366986_187_936 248
2 3300005445 Ga0070708_100025866 Ga0070708_1000258664 257
3 3300005468 Ga0070707_100053316 Ga0070707_1000533164 257
4 3300005471 Ga0070698_100004747 Ga0070698_1000047473 257
5 3300005536 Ga0070697_100043616 Ga0070697_1000436162 257
6 3300025910 Ga0207684_10000782 Ga0207684_1000078232 257
7 3300025922 Ga0207646_10000819 Ga0207646_1000081935 257
8 3300042876 Ga0451577_0018759 Ga0451577_0018759_4294_5166 257
9 3300044673 Ga0453683_0009438 Ga0453683_0009438_5316_6188 257
10 3300044712 Ga0453684_0025747 Ga0453684_0025747_2819_3691 257
11 3300006038 Ga0075365_10007954 Ga0075365_100079543 263
12 3300049576 Ga0501040_0215967 Ga0501040_0215967_532_1323 263
13 3300061734 Ga0530510_0259184 Ga0530510_0259184_308_1099 263
14 3300005546 Ga0070696_100186104 Ga0070696_1001861042 264
15 3300050492 nmdc:mga0yw44_147489_c1 nmdc:mga0yw44_147489_c1_233_1162 264
16 3300061734 Ga0530510_0000498 Ga0530510_0000498_7271_8074 267
17 3300048910 Ga0496107_0270754 Ga0496107_0270754_154_1047 268
18 3300048916 Ga0496113_0037365 Ga0496113_0037365_2487_3380 268
19 3300049528 Ga0501312_020151 Ga0501312_020151_40_951 272
20 3300006178 Ga0075367_10056471 Ga0075367_100564713 279
21 3300014326 Ga0157380_10071437 Ga0157380_100714373 279
22 3300006051 Ga0075364_10004108 Ga0075364_100041089 280
23 3300050490 nmdc:mga03n38_16897_c1 nmdc:mga03n38_16897_c1_378_1307 280
24 3300010375 Ga0105239_10700044 Ga0105239_107000441 281
25 3300041507 Ga0451851_0574117 Ga0451851_0574117_16_861 281
26 3300042876 Ga0451577_0102584 Ga0451577_0102584_1562_2473 281
27 3300044712 Ga0453684_0006902 Ga0453684_0006902_15346_16257 281
28 3300006038 Ga0075365_10005394 Ga0075365_100053946 283
29 3300006051 Ga0075364_10095619 Ga0075364_100956192 283
30 3300006177 Ga0075362_10009115 Ga0075362_100091154 283
31 3300006353 Ga0075370_10082875 Ga0075370_100828752 283
32 3300041456 Ga0451795_1505400 Ga0451795_1505400_1286_2209 283
33 3300005981 Ga0081538_10011695 Ga0081538_100116952 284
34 3300046492 Ga0495585_0000068 Ga0495585_0000068_45265_46200 284
35 3300005289 Ga0065704_10104122 Ga0065704_101041222 286
36 3300048919 Ga0496116_0031649 Ga0496116_0031649_1002_1871 287
37 3300005328 Ga0070676_10046743 Ga0070676_100467432 288
38 3300005331 Ga0070670_100003438 Ga0070670_10000343811 288
39 3300005334 Ga0068869_100024293 Ga0068869_1000242932 288
40 3300005336 Ga0070680_100000745 Ga0070680_10000074510 288
41 3300005337 Ga0070682_100000164 Ga0070682_10000016447 288
42 3300005339 Ga0070660_100004382 Ga0070660_1000043827 288
43 3300005340 Ga0070689_100057583 Ga0070689_1000575833 288
44 3300005341 Ga0070691_10012183 Ga0070691_100121832 288
45 3300005341 Ga0070691_10050449 Ga0070691_100504492 288
46 3300005343 Ga0070687_100024981 Ga0070687_1000249812 288
47 3300005344 Ga0070661_100007943 Ga0070661_1000079433 288
48 3300005366 Ga0070659_100002021 Ga0070659_10000202116 288
49 3300005406 Ga0070703_10006912 Ga0070703_100069122 288
50 3300005438 Ga0070701_10154743 Ga0070701_101547432 288
51 3300005440 Ga0070705_100001669 Ga0070705_1000016695 288
52 3300005441 Ga0070700_100125808 Ga0070700_1001258082 288
53 3300005444 Ga0070694_100000153 Ga0070694_10000015324 288
54 3300005444 Ga0070694_100015372 Ga0070694_1000153722 288
55 3300005444 Ga0070694_100114932 Ga0070694_1001149323 288
56 3300005455 Ga0070663_100007334 Ga0070663_1000073344 288
57 3300005457 Ga0070662_100003134 Ga0070662_1000031342 288
58 3300005457 Ga0070662_100170453 Ga0070662_1001704532 288
59 3300005458 Ga0070681_10014008 Ga0070681_100140085 288
60 3300005459 Ga0068867_100008244 Ga0068867_1000082446 288
61 3300005467 Ga0070706_100035998 Ga0070706_1000359983 288
62 3300005467 Ga0070706_100321353 Ga0070706_1003213532 288
63 3300005468 Ga0070707_100055168 Ga0070707_1000551683 288
64 3300005468 Ga0070707_100344999 Ga0070707_1003449992 288
65 3300005471 Ga0070698_100007635 Ga0070698_1000076353 288
66 3300005518 Ga0070699_100015519 Ga0070699_1000155195 288
67 3300005518 Ga0070699_100023335 Ga0070699_1000233352 288
68 3300005530 Ga0070679_100000882 Ga0070679_10000088225 288
69 3300005536 Ga0070697_100036241 Ga0070697_1000362413 288
70 3300005539 Ga0068853_100000850 Ga0068853_10000085021 288
71 3300005539 Ga0068853_100525263 Ga0068853_1005252632 288
72 3300005545 Ga0070695_100002222 Ga0070695_1000022225 288
73 3300005545 Ga0070695_100016734 Ga0070695_1000167342 288
74 3300005545 Ga0070695_100115345 Ga0070695_1001153452 288
75 3300005546 Ga0070696_100001217 Ga0070696_1000012175 288
76 3300005546 Ga0070696_100020509 Ga0070696_1000205092 288
77 3300005547 Ga0070693_100000018 Ga0070693_10000001825 288
78 3300005547 Ga0070693_100055468 Ga0070693_1000554682 288
79 3300005549 Ga0070704_100002573 Ga0070704_1000025734 288
80 3300005563 Ga0068855_100000233 Ga0068855_10000023338 288
81 3300005564 Ga0070664_100001518 Ga0070664_1000015188 288
82 3300005577 Ga0068857_100088024 Ga0068857_1000880242 288
83 3300005578 Ga0068854_100000372 Ga0068854_10000037224 288
84 3300005614 Ga0068856_100000806 Ga0068856_10000080616 288
85 3300005615 Ga0070702_100003464 Ga0070702_1000034642 288
86 3300005616 Ga0068852_100148826 Ga0068852_1001488262 288
87 3300005617 Ga0068859_100003308 Ga0068859_1000033086 288
88 3300005618 Ga0068864_100008738 Ga0068864_1000087386 288
89 3300005719 Ga0068861_100001947 Ga0068861_1000019472 288
90 3300005840 Ga0068870_10000059 Ga0068870_100000593 288
91 3300005841 Ga0068863_100045572 Ga0068863_1000455722 288
92 3300005842 Ga0068858_100556868 Ga0068858_1005568682 288
93 3300005843 Ga0068860_100056005 Ga0068860_1000560054 288
94 3300005844 Ga0068862_100010244 Ga0068862_1000102445 288
95 3300005844 Ga0068862_100161898 Ga0068862_1001618983 288
96 3300005937 Ga0081455_10001913 Ga0081455_1000191324 288
97 3300006173 Ga0070716_100003556 Ga0070716_1000035564 288
98 3300006175 Ga0070712_100133744 Ga0070712_1001337442 288
99 3300006852 Ga0075433_10027525 Ga0075433_100275254 288
100 3300006852 Ga0075433_10034194 Ga0075433_100341945 288
101 3300006931 Ga0097620_100003308 Ga0097620_1000033086 288
102 3300007076 Ga0075435_100047596 Ga0075435_1000475962 288
103 3300009147 Ga0114129_10071287 Ga0114129_100712875 288
104 3300009147 Ga0114129_10459647 Ga0114129_104596472 288
105 3300009148 Ga0105243_10080922 Ga0105243_100809222 288
106 3300009148 Ga0105243_10214733 Ga0105243_102147332 288
107 3300009174 Ga0105241_10024063 Ga0105241_100240633 288
108 3300013100 Ga0157373_10000292 Ga0157373_1000029237 288
109 3300013102 Ga0157371_10218441 Ga0157371_102184412 288
110 3300013105 Ga0157369_10012416 Ga0157369_100124168 288
111 3300013307 Ga0157372_10001109 Ga0157372_1000110925 288
112 3300013308 Ga0157375_10080759 Ga0157375_100807592 288
113 3300014325 Ga0163163_10027862 Ga0163163_100278622 288
114 3300025885 Ga0207653_10004027 Ga0207653_100040273 288
115 3300025907 Ga0207645_10004732 Ga0207645_100047324 288
116 3300025908 Ga0207643_10000105 Ga0207643_100001059 288
117 3300025910 Ga0207684_10013311 Ga0207684_100133113 288
118 3300025910 Ga0207684_10066959 Ga0207684_100669592 288
119 3300025911 Ga0207654_10006377 Ga0207654_100063773 288
120 3300025912 Ga0207707_10000034 Ga0207707_10000034153 288
121 3300025915 Ga0207693_10033253 Ga0207693_100332532 288
122 3300025917 Ga0207660_10001489 Ga0207660_1000148912 288
123 3300025918 Ga0207662_10001268 Ga0207662_100012685 288
124 3300025919 Ga0207657_10000066 Ga0207657_1000006689 288
125 3300025920 Ga0207649_10009553 Ga0207649_100095534 288
126 3300025921 Ga0207652_10000740 Ga0207652_1000074016 288
127 3300025922 Ga0207646_10046936 Ga0207646_100469364 288
128 3300025922 Ga0207646_10099807 Ga0207646_100998072 288
129 3300025922 Ga0207646_10270388 Ga0207646_102703882 288
130 3300025932 Ga0207690_10120857 Ga0207690_101208573 288
131 3300025933 Ga0207706_10205227 Ga0207706_102052272 288
132 3300025935 Ga0207709_10159138 Ga0207709_101591382 288
133 3300025939 Ga0207665_10006659 Ga0207665_100066595 288
134 3300025942 Ga0207689_10000365 Ga0207689_1000036539 288
135 3300025944 Ga0207661_10532741 Ga0207661_105327411 288
136 3300025945 Ga0207679_10000248 Ga0207679_1000024838 288
137 3300025949 Ga0207667_10013626 Ga0207667_100136262 288
138 3300026067 Ga0207678_10015227 Ga0207678_100152274 288
139 3300026075 Ga0207708_10272907 Ga0207708_102729072 288
140 3300026078 Ga0207702_10002703 Ga0207702_100027033 288
141 3300026088 Ga0207641_10084905 Ga0207641_100849052 288
142 3300026089 Ga0207648_10000856 Ga0207648_1000085617 288
143 3300026116 Ga0207674_10000050 Ga0207674_10000050108 288
144 3300026118 Ga0207675_100004499 Ga0207675_1000044992 288
145 3300027471 Ga0209995_1000777 Ga0209995_10007773 288
146 3300027526 Ga0209968_1001016 Ga0209968_10010162 288
147 3300027552 Ga0209982_1000065 Ga0209982_10000658 288
148 3300027614 Ga0209970_1003511 Ga0209970_10035112 288
149 3300027682 Ga0209971_1000137 Ga0209971_10001375 288
150 3300027695 Ga0209966_1000071 Ga0209966_100007140 288
151 3300027717 Ga0209998_10000113 Ga0209998_1000011328 288
152 3300027876 Ga0209974_10002561 Ga0209974_100025613 288
153 3300028380 Ga0268265_10022970 Ga0268265_100229703 288
154 3300028381 Ga0268264_10092875 Ga0268264_100928752 288
155 3300034817 Ga0373948_0002452 Ga0373948_0002452_33_905 288
156 3300034820 Ga0373959_0006230 Ga0373959_0006230_359_1231 288
157 3300035091 Ga0373951_0022032 Ga0373951_0022032_368_1240 288
158 3300035115 Ga0373941_0018555 Ga0373941_0018555_830_1702 288
159 3300035121 Ga0373960_0020543 Ga0373960_0020543_98_970 288
160 3300035241 Ga0373961_0001472 Ga0373961_0001472_3491_4363 288
161 3300035242 Ga0373962_0020279 Ga0373962_0020279_832_1704 288
162 3300042005 Ga0439448_0009360 Ga0439448_0009360_1890_2762 288
163 3300042439 Ga0439464_0007048 Ga0439464_0007048_1463_2335 288
164 3300042876 Ga0451577_0069501 Ga0451577_0069501_1488_2360 288
165 3300044673 Ga0453683_0009395 Ga0453683_0009395_277_1149 288
166 3300045051 Ga0451576_0005487 Ga0451576_0005487_4306_5178 288
167 3300045051 Ga0451576_0049709 Ga0451576_0049709_1407_2288 288
168 3300045051 Ga0451576_0136480 Ga0451576_0136480_1411_2283 288
169 3300048911 Ga0496108_0360554 Ga0496108_0360554_151_1023 288
170 3300048914 Ga0496111_0126342 Ga0496111_0126342_474_1346 288
171 3300048915 Ga0496112_0083916 Ga0496112_0083916_612_1484 288
172 3300049572 Ga0501036_0352668 Ga0501036_0352668_33_905 288
173 3300049575 Ga0501039_0010429 Ga0501039_0010429_2104_2976 288
174 3300049576 Ga0501040_0019012 Ga0501040_0019012_270_1142 288
175 3300049576 Ga0501040_0029949 Ga0501040_0029949_2688_3560 288
176 3300049578 Ga0501042_0200748 Ga0501042_0200748_45_917 288
177 3300049579 Ga0501043_0188445 Ga0501043_0188445_711_1583 288
178 3300049581 Ga0501047_0017611 Ga0501047_0017611_2835_3707 288
179 3300049584 Ga0501068_0035040 Ga0501068_0035040_341_1213 288
180 3300049584 Ga0501068_0134936 Ga0501068_0134936_456_1328 288
181 3300049587 Ga0501071_0177055 Ga0501071_0177055_29_901 288
182 3300049588 Ga0501072_0121561 Ga0501072_0121561_309_1181 288
183 3300049590 Ga0501074_0002500 Ga0501074_0002500_10645_11517 288
184 3300049591 Ga0501075_0036749 Ga0501075_0036749_1408_2280 288
185 3300049591 Ga0501075_0094806 Ga0501075_0094806_645_1517 288
186 3300049592 Ga0501076_0001404 Ga0501076_0001404_5235_6107 288
187 3300049592 Ga0501076_0037737 Ga0501076_0037737_1689_2561 288
188 3300049593 Ga0501077_0018720 Ga0501077_0018720_2004_2876 288
189 3300049593 Ga0501077_0148741 Ga0501077_0148741_497_1369 288
190 3300049741 Ga0501079_0007067 Ga0501079_0007067_6904_7776 288
191 3300049741 Ga0501079_0016240 Ga0501079_0016240_449_1321 288
192 3300049741 Ga0501079_0077825 Ga0501079_0077825_119_991 288
193 3300049742 Ga0501080_0026265 Ga0501080_0026265_2826_3698 288
194 3300049743 Ga0501081_0079303 Ga0501081_0079303_1072_1944 288
195 3300049743 Ga0501081_0295022 Ga0501081_0295022_152_1024 288
196 3300049744 Ga0501083_0016258 Ga0501083_0016258_3336_4208 288
197 3300049824 Ga0501045_0003188 Ga0501045_0003188_5308_6180 288
198 3300049824 Ga0501045_0056901 Ga0501045_0056901_1471_2343 288
199 3300049824 Ga0501045_0235258 Ga0501045_0235258_337_1209 288
200 3300049824 Ga0501045_0372535 Ga0501045_0372535_20_892 288
201 3300050507 nmdc:mga05p37_114243_c1 nmdc:mga05p37_114243_c1_2334_3206 288
202 3300050507 nmdc:mga05p37_394854_c1 nmdc:mga05p37_394854_c1_733_1605 288
203 3300050510 nmdc:mga06r32_202167_c1 nmdc:mga06r32_202167_c1_483_1355 288
204 3300050513 nmdc:mga0rr50_86956_c1 nmdc:mga0rr50_86956_c1_432_1304 288
205 3300050515 nmdc:mga0a205_8100_c1 nmdc:mga0a205_8100_c1_2492_3364 288
206 3300054114 Ga0501084_0000494 Ga0501084_0000494_18762_19634 288
207 3300054114 Ga0501084_0068054 Ga0501084_0068054_583_1455 288
208 3300060353 Ga0501082_0000376 Ga0501082_0000376_11062_11934 288
209 3300060353 Ga0501082_0149499 Ga0501082_0149499_76_948 288
210 3300061734 Ga0530510_0181845 Ga0530510_0181845_565_1437 288
211 3300005406 Ga0070703_10045534 Ga0070703_100455341 289
212 3300049588 Ga0501072_0045232 Ga0501072_0045232_1739_2623 289
213 3300005719 Ga0068861_100008222 Ga0068861_1000082228 290
214 3300013308 Ga0157375_10857597 Ga0157375_108575971 290
215 3300014969 Ga0157376_10333428 Ga0157376_103334281 290
216 3300025940 Ga0207691_10031579 Ga0207691_100315798 290
217 3300026118 Ga0207675_100020817 Ga0207675_1000208178 290
218 iso_pu_bacteria 2919414237 2919415308 290
219 iso_pu_bacteria 2977254563 2977256737 290
220 iso_pu_bacteria 2990275345 2990277611 290
221 3300048921 Ga0496118_0000366 Ga0496118_0000366_32748_33641 291
222 iso_pu_bacteria 2548877040 2550901710 291
223 iso_pu_bacteria 2571042143 2571532952 291
224 iso_pu_bacteria 2571042588 2573038421 291
225 iso_pu_bacteria 2579778775 2580934558 291
226 iso_pu_bacteria 2619619294 2621276136 291
227 iso_pu_bacteria 2728368933 2728530930 291
228 iso_pu_bacteria 2881636855 2881639068 291
229 iso_pu_bacteria 2938649242 2938651704 291
230 iso_pu_bacteria 2968558590 2968562630 291
231 iso_pu_bacteria 2971511577 2971512415 291
232 iso_pu_bacteria 2980176882 2980178065 291
233 iso_pu_bacteria 2996632988 2996638057 291
234 iso_pu_bacteria 8054465665 8054469713 291
235 3300005445 Ga0070708_100092259 Ga0070708_1000922591 292
236 3300005468 Ga0070707_100267584 Ga0070707_1002675842 292
237 3300005471 Ga0070698_100004001 Ga0070698_10000400114 292
238 3300005518 Ga0070699_100016796 Ga0070699_1000167965 292
239 3300005518 Ga0070699_100056849 Ga0070699_1000568492 292
240 3300006914 Ga0075436_100000109 Ga0075436_10000010924 292
241 3300007076 Ga0075435_100000700 Ga0075435_10000070011 292
242 3300007788 Ga0099795_10105346 Ga0099795_101053462 292
243 3300050513 nmdc:mga0rr50_281_c1 nmdc:mga0rr50_281_c1_7329_8249 292
244 3300050514 nmdc:mga08x19_44_c1 nmdc:mga08x19_44_c1_121709_122629 292
245 iso_pu_bacteria 2971403814 2971407950 292
246 3300013306 Ga0163162_10478146 Ga0163162_104781461 293
247 3300031456 Ga0307513_10000004 Ga0307513_10000004321 293
248 3300031730 Ga0307516_10006430 Ga0307516_100064309 293
249 3300045836 Ga0466958_0316418 Ga0466958_0316418_39_920 293
250 3300053079 Ga0500610_0008874 Ga0500610_0008874_915_1835 293
251 3300053093 Ga0500651_0001519 Ga0500651_0001519_6737_7654 293
252 3300053162 Ga0500638_034719 Ga0500638_034719_433_1359 293
253 iso_pu_bacteria 2858438669 2858439597 293
254 3300003187 JGI25151J46595_10003375 JGI25151J46595_1000337510 294
255 3300005539 Ga0068853_100000028 Ga0068853_10000002897 294
256 3300006048 Ga0075363_100027895 Ga0075363_1000278952 294
257 3300006177 Ga0075362_10000127 Ga0075362_100001272 294
258 3300006195 Ga0075366_10007265 Ga0075366_100072657 294
259 3300006353 Ga0075370_10102179 Ga0075370_101021792 294
260 3300025298 Ga0209050_1002201 Ga0209050_10022012 294
261 3300025935 Ga0207709_10018843 Ga0207709_100188433 294
262 3300026041 Ga0207639_10000070 Ga0207639_100000703 294
263 3300031251 Ga0265327_10000425 Ga0265327_1000042571 294
264 3300031344 Ga0265316_10186882 Ga0265316_101868822 294
265 3300031728 Ga0316578_10227957 Ga0316578_102279572 294
266 3300031733 Ga0316577_10000683 Ga0316577_100006835 294
267 3300031733 Ga0316577_10033646 Ga0316577_100336462 294
268 3300036647 Ga0316582_0031943 Ga0316582_0031943_1322_2212 294
269 3300036712 Ga0316584_0193169 Ga0316584_0193169_125_1015 294
270 3300039447 Ga0436361_0007045 Ga0436361_0007045_241_1143 294
271 3300039447 Ga0436361_0159744 Ga0436361_0159744_520_1422 294
272 3300039447 Ga0436361_0369136 Ga0436361_0369136_5712_6614 294
273 3300039447 Ga0436361_0421799 Ga0436361_0421799_658_1560 294
274 3300039447 Ga0436361_1159590 Ga0436361_1159590_683_1585 294
275 3300045049 Ga0466959_0126657 Ga0466959_0126657_381_1310 294
276 3300048907 Ga0496104_0002437 Ga0496104_0002437_8912_9805 294
277 3300048910 Ga0496107_0001005 Ga0496107_0001005_7042_7935 294
278 3300048919 Ga0496116_0040596 Ga0496116_0040596_324_1217 294
279 3300050489 nmdc:mga03683_571_c1 nmdc:mga03683_571_c1_9049_9951 294
280 3300050496 nmdc:mga07m45_49071_c1 nmdc:mga07m45_49071_c1_525_1427 294
281 3300053103 Ga0500555_000351 Ga0500555_000351_1515_2417 294
282 3300053104 Ga0500556_0000156 Ga0500556_0000156_47171_48073 294
283 3300053153 Ga0500616_0013525 Ga0500616_0013525_534_1478 294
284 iso_pu_bacteria 2928519762 2928520341 294
285 3300005518 Ga0070699_100000261 Ga0070699_1000002618 295
286 3300006847 Ga0075431_100000072 Ga0075431_10000007211 295
287 3300025916 Ga0207663_10318793 Ga0207663_103187931 295
288 3300036647 Ga0316582_0066403 Ga0316582_0066403_1005_1943 295
289 3300039438 Ga0436360_0708693 Ga0436360_0708693_308_1210 295
290 3300046615 Ga0495656_0078082 Ga0495656_0078082_336_1295 295
291 iso_pu_bacteria 8055037949 8055039203 295
292 3300005536 Ga0070697_100010096 Ga0070697_1000100965 296
293 3300005843 Ga0068860_100144889 Ga0068860_1001448892 296
294 3300006038 Ga0075365_10056227 Ga0075365_100562273 296
295 3300006048 Ga0075363_100044778 Ga0075363_1000447784 296
296 3300006353 Ga0075370_10100829 Ga0075370_101008292 296
297 3300025922 Ga0207646_10040622 Ga0207646_100406223 296
298 3300048919 Ga0496116_0010632 Ga0496116_0010632_6240_7157 296
299 3300048922 Ga0496119_0000122 Ga0496119_0000122_54107_55024 296
300 3300048923 Ga0496120_0000045 Ga0496120_0000045_160358_161275 296
301 3300048926 Ga0496123_0112976 Ga0496123_0112976_356_1273 296
302 3300048927 Ga0496124_0002697 Ga0496124_0002697_15296_16213 296
303 3300050496 nmdc:mga07m45_44614_c1 nmdc:mga07m45_44614_c1_515_1444 296
304 iso_pu_bacteria 2523231044 2523384799 297
305 3300005339 Ga0070660_100014990 Ga0070660_1000149904 299
306 3300006358 Ga0068871_100289670 Ga0068871_1002896701 299
307 3300009098 Ga0105245_10151536 Ga0105245_101515363 299
308 3300013297 Ga0157378_10318554 Ga0157378_103185542 299
309 3300006173 Ga0070716_100000002 Ga0070716_100000002283 301
310 3300006844 Ga0075428_100061787 Ga0075428_1000617873 302
311 3300006846 Ga0075430_100377648 Ga0075430_1003776481 302
312 3300006847 Ga0075431_100153436 Ga0075431_1001534362 302
313 3300031691 Ga0316579_10000317 Ga0316579_1000031714 302
314 3300031691 Ga0316579_10127422 Ga0316579_101274221 302
315 3300031728 Ga0316578_10008573 Ga0316578_100085737 302
316 3300031995 Ga0307409_100043524 Ga0307409_1000435244 302
317 3300032133 Ga0316583_10019466 Ga0316583_100194662 302
318 3300032137 Ga0316585_10043158 Ga0316585_100431582 302
319 3300035398 Ga0316574_0020687 Ga0316574_0020687_1385_2347 302
320 3300035398 Ga0316574_0066461 Ga0316574_0066461_553_1515 302
321 3300036647 Ga0316582_0002348 Ga0316582_0002348_2631_3554 302
322 3300036712 Ga0316584_0004990 Ga0316584_0004990_7013_7936 302
323 3300037588 Ga0316581_0000778 Ga0316581_0000778_413_1336 302
324 3300049576 Ga0501040_0006389 Ga0501040_0006389_2968_3885 302
325 3300049578 Ga0501042_0001236 Ga0501042_0001236_4451_5368 302
326 3300054114 Ga0501084_0410710 Ga0501084_0410710_149_1087 302
327 3300005468 Ga0070707_100156839 Ga0070707_1001568392 303
328 3300025910 Ga0207684_10312912 Ga0207684_103129121 303
329 3300025915 Ga0207693_10248490 Ga0207693_102484901 303
330 3300025922 Ga0207646_10221373 Ga0207646_102213732 303
331 3300025939 Ga0207665_10149810 Ga0207665_101498101 303
332 3300049575 Ga0501039_0243194 Ga0501039_0243194_292_1257 303
333 3300049576 Ga0501040_0040581 Ga0501040_0040581_1632_2597 303
334 3300049579 Ga0501043_0302796 Ga0501043_0302796_105_1070 303
335 3300049587 Ga0501071_0400426 Ga0501071_0400426_62_1027 303
336 3300049591 Ga0501075_0338026 Ga0501075_0338026_22_987 303
337 3300049592 Ga0501076_0017190 Ga0501076_0017190_2676_3641 303
338 3300049592 Ga0501076_0219897 Ga0501076_0219897_462_1427 303
339 3300049593 Ga0501077_0080786 Ga0501077_0080786_266_1231 303
340 3300049741 Ga0501079_0065479 Ga0501079_0065479_571_1536 303
341 3300060353 Ga0501082_0173573 Ga0501082_0173573_829_1794 303
342 3300061734 Ga0530510_0040418 Ga0530510_0040418_1589_2554 303
343 3300061734 Ga0530510_0043672 Ga0530510_0043672_1354_2319 303
344 3300005536 Ga0070697_100381652 Ga0070697_1003816521 304
345 3300025906 Ga0207699_10082681 Ga0207699_100826812 304
346 3300049743 Ga0501081_0088366 Ga0501081_0088366_929_1885 305
347 3300000549 LJQas_1001529 LJQas_10015293 311
348 3300047320 Ga0495672_0015535 Ga0495672_0015535_17_958 311

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02899

Phage_int_SAM_1

Phage integrase, N-terminal SAM-like domain

68

150

0.98

PF00589

Phage_integrase

Phage integrase family

171

345

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.8392 11 115
3nrw-assembly1.cif.gz_A crystal structure of the n-terminal domain of phage integrase/site-specific recombinase (tnp) from haloarcula marismortui, northeast structural genomics consortium target hmr208a 0.832 11 115
1aih-assembly2.cif.gz_C catalytic domain of bacteriophage hp1 integrase 0.8019 124 280
5dcf-assembly1.cif.gz_A c-terminal domain of xerd recombinase in complex with gamma domain of ftsk 0.7695 125 300
2kd1-assembly1.cif.gz_A solution nmr structure of the integrase-like domain from bacillus cereus ordered locus bc_1272. northeast structural genomics consortium target bcr268f 0.7669 6 112
ID Description Score Start End Superfamily
af_P9WF35_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9626 15 110 1.10.150.130
1a0pA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9428 12 112 1.10.150.130
af_Q2FY74_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.94 15 109 1.10.150.130
af_P9WF35_2_96_1.10.150.130 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9334 15 110 1.10.150.130
1a0pA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;Tyrosine recombinase, N-terminal domain 0.9328 12 112 1.10.150.130
ID Description Score Start End GO Terms
AF-A0A7W0S333-F1-model_v4 Tyrosine-type recombinase/integrase 0.9494 120 309 GO:0003677
GO:0006310
GO:0015074
AF-A0A3E2TRW6-F1-model_v4 Integrase 0.9472 121 307 GO:0003677
GO:0005737
GO:0006310
GO:0015074
AF-A0A3N5TSL5-F1-model_v4 deleted 0.9457 120 306
AF-A0A0R2QCX0-F1-model_v4 Tyr recombinase domain-containing protein 0.9406 125 309 GO:0003677
GO:0006310
GO:0015074
AF-A0A2E8UT12-F1-model_v4 Site-specific recombinase 0.9398 152 308 GO:0003677
GO:0006310
GO:0015074

Feature Viewer

pLDDT pTM Quality
83.01 0.64 Medium
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Predicted Structure (AlphaFold2)

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