F417554

General Info

Members Datasets Scaffolds Average Seq Length
348 178 692 974

Family's Representative Sequence

Representative Sequence 3300025927|Ga0207687_10016961|Ga0207687_100169612
Length 1039
Sequence MPRWTFYLLFTVSGFAGLIYESIWTHYLKLFLGHAAYAQSLVLVVFMGGMAAGAAWCARLSERLERPLLGYALVEAVVGAAALVFHPVFVASTDWAYESLLPALGSESGALAAKLALSCLLIAPQSVLLGMTFPLMSAALVRAHPATPGESLAMLYFTNSLGAALGVLASGFLLIAPQSVLLGMTFPLVSAALVRAHPATPGESLAMLYFTNSLGAALGVLASGFLLIAWAGLPGTLRVAGWTNLALAAAVWLLARPLAVFPKISKTEEEGTSSLLLAVAFFTGLASFVYEIVWIRMLSLVLGASTHSFELMLSTFILGLALGGLAVRRRVDRAGSAERLLAWVQVAMGLAALATLPVYDLTFGLMETLMKGLARTQTGYVFFNLSGQAIAALVMLPAAFCAGTTLPLISAALLRRGAGEGAIGRVYAANTLGAIVGVVAAVHVGLPLVGLKGALISACTIDIALGLILLRVCRTTVWRAAAVACAGAILVVGLAVELDANKMTAGVFRYGDLAASRDAEILYRKDGKTATVHLVKYPEAVSLRTNGKSDGSINLDRDGVRGTDEITMVLTGALPLALRPDAKTAAVIGIGTGLTTHTLLQSLEIERVDTIEIEAAMAEAARGFMPRNVGAFADPRGAILIDDAKTFFSAHGRRYDVIVSEPSNPWVSGVSSLFTREFYQRIRRHLAPRGLLVQWIQLYEIDPSLVATVMRALGEAFPDYAVFAASEHDLLIVASEAPLPLPPRADVFEHPGVAQELLSVHILSAGDLDARYLGNRALLEPLFASYGMPANTDYAPVLDLNAARQRFMERSATELVALLDADVPLLELLDPGRSRRPVNPLYKGAYAFGRVEATRLAWYARNFLAGARPEPEAVPTQLQKDLELVQLRLLECREPRQLDVWLHSALRVARTVNPYLAPDDAGAVWRAIASTKCFSTLPQFQRRWIELFAAVAARDPARMARHARELLDTTPELAADAREYLVLAALSGSVAGRDKPAALELWRAQKSSLRAPAAPAFRLLRCHADAASCAAEFSLYAER

Samples

Sample ID Description Type Environment
1 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
88 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
100 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
101 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
102 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
103 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
114 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
172 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.44
Nodule 0
Rhizoplane 0
Rhizosphere 97.7
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207687_10016961 3300025927 Bacteria 4787
2 Ga0055540_1001161 3300003792 Bacteria 16398
3 Ga0055531_10000211 3300003794 Bacteria 64226
4 Ga0070683_100021069 3300005329 Bacteria 5814
5 Ga0070690_100000352 3300005330 Bacteria 23682
6 Ga0070690_100008314 3300005330 Bacteria 5971
7 Ga0068869_100000512 3300005334 Bacteria 21609
8 Ga0070680_100001459 3300005336 Bacteria 17140
9 Ga0068868_100000262 3300005338 Bacteria 35722
10 Ga0070689_100003157 3300005340 Bacteria 10898
11 Ga0070691_10004014 3300005341 Bacteria 6665
12 Ga0070692_10006581 3300005345 Bacteria 5055
13 Ga0070692_10016672 3300005345 Bacteria 3499
14 Ga0070668_100015344 3300005347 Bacteria 5725
15 Ga0070669_100001314 3300005353 Bacteria 17949
16 Ga0070701_10000307 3300005438 Bacteria 15985
17 Ga0070701_10001019 3300005438 Bacteria 10211
18 Ga0070705_100000343 3300005440 Bacteria 27460
19 Ga0070705_100002561 3300005440 Bacteria 9134
20 Ga0070700_100000221 3300005441 Bacteria 31693
21 Ga0070700_100000230 3300005441 Bacteria 30920
22 Ga0070700_100007137 3300005441 Bacteria 6013
23 Ga0070694_100000253 3300005444 Bacteria 28222
24 Ga0070694_100008113 3300005444 Bacteria 6413
25 Ga0070694_100025669 3300005444 Bacteria 3812
26 Ga0070694_100040491 3300005444 Bacteria 3106
27 Ga0070681_10000615 3300005458 Bacteria 29209
28 Ga0070681_10047443 3300005458 Bacteria 4293
29 Ga0068867_100001201 3300005459 Bacteria 17780
30 Ga0068867_100002103 3300005459 Bacteria 13951
31 Ga0070697_100001109 3300005536 Bacteria 20376
32 Ga0070686_100000370 3300005544 Bacteria 28593
33 Ga0070686_100003351 3300005544 Bacteria 8779
34 Ga0070695_100000423 3300005545 Bacteria 21846
35 Ga0070695_100004329 3300005545 Bacteria 8315
36 Ga0070696_100000073 3300005546 Bacteria 49104
37 Ga0070696_100003689 3300005546 Bacteria 10217
38 Ga0070696_100025869 3300005546 Bacteria 3992
39 Ga0070696_100030016 3300005546 Bacteria 3719
40 Ga0070693_100000443 3300005547 Bacteria 18673
41 Ga0070704_100001092 3300005549 Bacteria 14073
42 Ga0070704_100009570 3300005549 Bacteria 5866
43 Ga0068855_100004746 3300005563 Bacteria 16595
44 Ga0070702_100001247 3300005615 Bacteria 10320
45 Ga0068859_100001384 3300005617 Bacteria 24672
46 Ga0068866_10000217 3300005718 Bacteria 27279
47 Ga0068861_100000142 3300005719 Bacteria 36697
48 Ga0068861_100000311 3300005719 Bacteria 27225
49 Ga0068858_100003054 3300005842 Bacteria 16779
50 Ga0068858_100015029 3300005842 Bacteria 7283
51 Ga0068860_100001142 3300005843 Bacteria 29124
52 Ga0068862_100001915 3300005844 Bacteria 18896
53 Ga0068862_100002479 3300005844 Bacteria 16336
54 Ga0081539_10000004 3300005985 Bacteria 555600
55 Ga0081539_10000178 3300005985 Bacteria 149201
56 Ga0070716_100003846 3300006173 Bacteria 7126
57 Ga0070716_100010078 3300006173 Bacteria 4728
58 Ga0097621_100002277 3300006237 Bacteria 13146
59 Ga0097621_100002990 3300006237 Bacteria 11616
60 Ga0068871_100000331 3300006358 Bacteria 32799
61 Ga0068871_100001696 3300006358 Bacteria 14784
62 Ga0068871_100010333 3300006358 Bacteria 6805
63 Ga0075428_100002006 3300006844 Bacteria 21940
64 Ga0075428_100015062 3300006844 Bacteria 8590
65 Ga0075428_100037605 3300006844 Bacteria 5327
66 Ga0075430_100005926 3300006846 Bacteria 10322
67 Ga0075430_100014994 3300006846 Bacteria 6600
68 Ga0075430_100016113 3300006846 Bacteria 6365
69 Ga0075430_100026504 3300006846 Bacteria 4930
70 Ga0075431_100001787 3300006847 Bacteria 20288
71 Ga0075431_100021640 3300006847 Bacteria 6577
72 Ga0075431_100026646 3300006847 Bacteria 5929
73 Ga0075431_100078799 3300006847 Bacteria 3401
74 Ga0075433_10018143 3300006852 Bacteria 5844
75 Ga0075434_100000784 3300006871 Bacteria 25133
76 Ga0075434_100007320 3300006871 Bacteria 10215
77 Ga0075429_100000003 3300006880 Bacteria 130377
78 Ga0075429_100000167 3300006880 Bacteria 42008
79 Ga0068865_100000456 3300006881 Bacteria 22794
80 Ga0075436_100008333 3300006914 Bacteria 7088
81 Ga0075436_100010157 3300006914 Bacteria 6446
82 Ga0075436_100016238 3300006914 Bacteria 5096
83 Ga0097620_100001384 3300006931 Bacteria 24672
84 Ga0075435_100000429 3300007076 Bacteria 25739
85 Ga0111539_10001073 3300009094 Bacteria 36082
86 Ga0111539_10004725 3300009094 Bacteria 17800
87 Ga0111539_10005067 3300009094 Bacteria 17113
88 Ga0111539_10032660 3300009094 Bacteria 6320
89 Ga0111539_10040944 3300009094 Bacteria 5574
90 Ga0111539_10042819 3300009094 Bacteria 5433
91 Ga0111539_10111002 3300009094 Bacteria 3218
92 Ga0105245_10000576 3300009098 Bacteria 33328
93 Ga0114129_10007217 3300009147 Bacteria 15819
94 Ga0114129_10035845 3300009147 Bacteria 7006
95 Ga0105243_10000974 3300009148 Bacteria 26629
96 Ga0105243_10007202 3300009148 Bacteria 8548
97 Ga0105242_10001474 3300009176 Bacteria 18518
98 Ga0105242_10003211 3300009176 Bacteria 12730
99 Ga0105249_10003893 3300009553 Bacteria 12898
100 Ga0105249_10005297 3300009553 Bacteria 11138
101 Ga0157378_10000814 3300013297 Bacteria 28997
102 Ga0157378_10010650 3300013297 Bacteria 8036
103 Ga0163163_10033665 3300014325 Bacteria 4958
104 Ga0157380_10004547 3300014326 Bacteria 9629
105 Ga0157376_10001072 3300014969 Bacteria 17915
106 Ga0209051_1000115 3300025303 Bacteria 152010
107 Ga0209257_1000055 3300025304 Bacteria 415534
108 Ga0207660_10001194 3300025917 Bacteria 17424
109 Ga0207662_10000112 3300025918 Bacteria 38862
110 Ga0207681_10000523 3300025923 Bacteria 26591
111 Ga0207709_10001456 3300025935 Bacteria 16481
112 Ga0207709_10002770 3300025935 Bacteria 10808
113 Ga0207670_10002135 3300025936 Bacteria 10340
114 Ga0207704_10000301 3300025938 Bacteria 23320
115 Ga0207704_10000910 3300025938 Bacteria 13103
116 Ga0207691_10056690 3300025940 Bacteria 3568
117 Ga0207689_10001636 3300025942 Bacteria 21219
118 Ga0207667_10011562 3300025949 Bacteria 10251
119 Ga0207712_10010145 3300025961 Bacteria 5973
120 Ga0207668_10012468 3300025972 Bacteria 5204
121 Ga0207677_10000537 3300026023 Bacteria 23957
122 Ga0207703_10003759 3300026035 Bacteria 12627
123 Ga0207708_10000324 3300026075 Bacteria 37852
124 Ga0207708_10001056 3300026075 Bacteria 20639
125 Ga0207708_10014052 3300026075 Bacteria 5982
126 Ga0207641_10025037 3300026088 Bacteria 4921
127 Ga0207648_10000205 3300026089 Bacteria 62995
128 Ga0207648_10000680 3300026089 Bacteria 38152
129 Ga0207675_100000851 3300026118 Bacteria 30404
130 Ga0207675_100001096 3300026118 Bacteria 26828
131 Ga0209967_1000703 3300027364 Bacteria 4314
132 Ga0210000_1001384 3300027462 Bacteria 3424
133 Ga0207428_10002108 3300027907 Bacteria 20049
134 Ga0207428_10002931 3300027907 Bacteria 16910
135 Ga0207428_10003365 3300027907 Bacteria 15539
136 Ga0268265_10000691 3300028380 Bacteria 33178
137 Ga0268265_10002780 3300028380 Bacteria 12899
138 Ga0268264_10001774 3300028381 Bacteria 19721
139 Ga0307513_10066022 3300031456 Bacteria 3804
140 Ga0307406_10007847 3300031901 Bacteria 5938
141 Ga0373934_0000092 3300035086 Bacteria 31400
142 Ga0373934_0005043 3300035086 Bacteria 4891
143 Ga0373923_0000715 3300035111 Bacteria 8523
144 Ga0373936_0006148 3300035113 Bacteria 4523
145 Ga0373953_0003785 3300035117 Bacteria 4758
146 Ga0373954_0000523 3300035118 Bacteria 14407
147 Ga0373954_0001910 3300035118 Bacteria 8620
148 Ga0373954_0003515 3300035118 Bacteria 6657
149 Ga0373954_0004325 3300035118 Bacteria 6106
150 Ga0373956_0000029 3300035119 Bacteria 45843
151 Ga0373956_0005899 3300035119 Bacteria 4899
152 Ga0373957_0006228 3300035120 Bacteria 3749
153 Ga0373955_0001079 3300035172 Bacteria 11599
154 Ga0373955_0005060 3300035172 Bacteria 5896
155 Ga0373924_0010448 3300035410 Bacteria 3422
156 Ga0373931_0000108 3300035691 Bacteria 37813
157 Ga0373935_0008121 3300035692 Bacteria 6291
158 Ga0373933_0001487 3300035724 Bacteria 13722
159 Ga0373933_0002481 3300035724 Bacteria 10383
160 Ga0373933_0008644 3300035724 Bacteria 5555
161 Ga0373933_0008888 3300035724 Bacteria 5477
162 Ga0373947_0021135 3300035725 Bacteria 3765
163 Ga0373937_0000233 3300036401 Bacteria 54240
164 Ga0373937_0004813 3300036401 Bacteria 11472
165 Ga0373937_0026646 3300036401 Bacteria 5222
166 Ga0395905_0080332 3300037471 Bacteria 3056
167 Ga0400490_03529 3300038726 Bacteria 5286
168 Ga0400487_40193 3300039110 Bacteria 5257
169 Ga0439461_0000569 3300041410 Bacteria 5346
170 Ga0439434_0000446 3300042435 Bacteria 11789
171 Ga0439435_0000009 3300042436 Bacteria 21467
172 Ga0439435_0000030 3300042436 Bacteria 15777
173 Ga0451577_0000028 3300042876 Bacteria 395361
174 Ga0451577_0007401 3300042876 Bacteria 10777
175 Ga0451577_0008011 3300042876 Bacteria 10314
176 Ga0451577_0046689 3300042876 Unclassified 3874
177 Ga0453683_0000012 3300044673 Bacteria 376341
178 Ga0453683_0001746 3300044673 Bacteria 18032
179 Ga0453683_0008925 3300044673 Bacteria 6705
180 Ga0453683_0026244 3300044673 Unclassified 3700
181 Ga0453683_0028300 3300044673 Bacteria 3550
182 Ga0453684_0000281 3300044712 Bacteria 219577
183 Ga0453684_0000472 3300044712 Bacteria 159406
184 Ga0453684_0001149 3300044712 Bacteria 82600
185 Ga0453684_0001277 3300044712 Bacteria 75282
186 Ga0453684_0004969 3300044712 Bacteria 27055
187 Ga0453684_0009820 3300044712 Bacteria 16584
188 Ga0453684_0010231 3300044712 Bacteria 16073
189 Ga0453684_0025555 3300044712 Bacteria 8570
190 Ga0453684_0086554 3300044712 Bacteria 3888
191 Ga0451576_0000026 3300045051 Bacteria 427585
192 Ga0451576_0000490 3300045051 Bacteria 87626
193 Ga0451576_0003297 3300045051 Bacteria 22419
194 Ga0451576_0020726 3300045051 Bacteria 7155
195 Ga0495592_0007211 3300046454 Bacteria 8327
196 Ga0495592_0012567 3300046454 Bacteria 6434
197 Ga0495641_0002872 3300046461 Bacteria 13318
198 Ga0495651_0000178 3300046462 Bacteria 47161
199 Ga0495651_0001600 3300046462 Bacteria 17516
200 Ga0495651_0002367 3300046462 Bacteria 14567
201 Ga0495653_0011537 3300046463 Bacteria 7215
202 Ga0495653_0027606 3300046463 Bacteria 4542
203 Ga0495580_0020152 3300046472 Bacteria 4942
204 Ga0495582_0007552 3300046473 Bacteria 6014
205 Ga0495639_0004318 3300046475 Bacteria 6096
206 Ga0495662_0016602 3300046476 Bacteria 3567
207 Ga0495608_0019497 3300046511 Bacteria 4666
208 Ga0495608_0032251 3300046511 Bacteria 3541
209 Ga0495618_0008485 3300046514 Bacteria 6213
210 Ga0495618_0019807 3300046514 Bacteria 4141
211 Ga0495628_0004302 3300046516 Bacteria 12651
212 Ga0495628_0012241 3300046516 Bacteria 7232
213 Ga0495630_0001696 3300046517 Bacteria 15381
214 Ga0495630_0007741 3300046517 Bacteria 7688
215 Ga0495630_0038361 3300046517 Bacteria 3583
216 Ga0495652_0013632 3300046529 Bacteria 7315
217 Ga0495652_0021622 3300046529 Bacteria 5718
218 Ga0495665_0011739 3300046531 Bacteria 4747
219 Ga0495640_0010267 3300046533 Bacteria 7245
220 Ga0495587_0021492 3300046536 Bacteria 3979
221 Ga0495645_0002151 3300046543 Bacteria 13376
222 Ga0495667_0051023 3300046559 Unclassified 2729
223 Ga0495634_0003720 3300046642 Bacteria 12160
224 Ga0495657_0015677 3300046675 Bacteria 5538
225 Ga0495599_0004895 3300046678 Bacteria 7963
226 Ga0495623_0010279 3300046679 Bacteria 6056
227 Ga0495647_0003590 3300046681 Bacteria 4976
228 Ga0495658_0004022 3300046683 Bacteria 7248
229 Ga0495600_0004915 3300046809 Bacteria 8026
230 Ga0495604_0037557 3300047317 Bacteria 3813
231 Ga0495636_0001867 3300047318 Bacteria 8053
232 Ga0495674_0005529 3300047319 Bacteria 12121
233 Ga0495680_0004927 3300047322 Bacteria 12637
234 Ga0495675_0001531 3300047444 Bacteria 13954
235 Ga0495684_0043764 3300047471 Bacteria 3428
236 Ga0501033_0022270 3300049570 Bacteria 4781
237 Ga0501034_0003219 3300049571 Bacteria 18691
238 Ga0501036_0000101 3300049572 Bacteria 53813
239 Ga0501036_0021307 3300049572 Bacteria 5447
240 Ga0501037_0021476 3300049573 Bacteria 4772
241 Ga0501038_0001381 3300049574 Bacteria 22182
242 Ga0501038_0056769 3300049574 Bacteria 3363
243 Ga0501039_0000117 3300049575 Bacteria 54402
244 Ga0501039_0000129 3300049575 Bacteria 52452
245 Ga0501039_0000767 3300049575 Bacteria 23070
246 Ga0501040_0001539 3300049576 Bacteria 14666
247 Ga0501040_0003368 3300049576 Bacteria 10319
248 Ga0501041_0000040 3300049577 Bacteria 43977
249 Ga0501041_0000048 3300049577 Bacteria 42332
250 Ga0501041_0003178 3300049577 Bacteria 9445
251 Ga0501041_0003243 3300049577 Bacteria 9356
252 Ga0501041_0003728 3300049577 Bacteria 8761
253 Ga0501041_0026252 3300049577 Bacteria 3503
254 Ga0501041_0027748 3300049577 Bacteria 3413
255 Ga0501042_0000026 3300049578 Bacteria 48274
256 Ga0501042_0022660 3300049578 Bacteria 4388
257 Ga0501043_0003448 3300049579 Bacteria 12994
258 Ga0501043_0016022 3300049579 Bacteria 5877
259 Ga0501046_0000705 3300049580 Bacteria 32282
260 Ga0501046_0005604 3300049580 Bacteria 11206
261 Ga0501046_0021460 3300049580 Bacteria 5329
262 Ga0501048_0001332 3300049582 Bacteria 18718
263 Ga0501048_0006833 3300049582 Bacteria 8669
264 Ga0501048_0014211 3300049582 Bacteria 5897
265 Ga0501048_0032021 3300049582 Bacteria 3802
266 Ga0501071_0000133 3300049587 Bacteria 30216
267 Ga0501071_0004223 3300049587 Bacteria 9097
268 Ga0501071_0005450 3300049587 Bacteria 8181
269 Ga0501071_0016537 3300049587 Bacteria 5075
270 Ga0501072_0000528 3300049588 Bacteria 27443
271 Ga0501072_0003663 3300049588 Bacteria 11578
272 Ga0501072_0008146 3300049588 Bacteria 7954
273 Ga0501072_0029284 3300049588 Bacteria 4300
274 Ga0501074_0017163 3300049590 Bacteria 5251
275 Ga0501075_0000036 3300049591 Bacteria 55260
276 Ga0501075_0000204 3300049591 Bacteria 31579
277 Ga0501075_0001062 3300049591 Bacteria 17678
278 Ga0501075_0001945 3300049591 Bacteria 13626
279 Ga0501075_0013219 3300049591 Bacteria 5888
280 Ga0501075_0033535 3300049591 Bacteria 3820
281 Ga0501076_0000220 3300049592 Bacteria 34479
282 Ga0501076_0000445 3300049592 Bacteria 26163
283 Ga0501076_0001309 3300049592 Bacteria 16612
284 Ga0501076_0001733 3300049592 Bacteria 14751
285 Ga0501076_0004383 3300049592 Bacteria 10029
286 Ga0501077_0000855 3300049593 Bacteria 18401
287 Ga0501077_0004038 3300049593 Bacteria 8858
288 Ga0501079_0000807 3300049741 Bacteria 21328
289 Ga0501079_0000879 3300049741 Bacteria 20602
290 Ga0501079_0001228 3300049741 Bacteria 17937
291 Ga0501079_0010287 3300049741 Bacteria 7106
292 Ga0501079_0022470 3300049741 Bacteria 4837
293 Ga0501080_0003496 3300049742 Bacteria 13842
294 Ga0501080_0009588 3300049742 Bacteria 8840
295 Ga0501080_0018468 3300049742 Bacteria 6454
296 Ga0501080_0056144 3300049742 Bacteria 3668
297 Ga0501081_0000074 3300049743 Bacteria 39073
298 Ga0501081_0000160 3300049743 Bacteria 31010
299 Ga0501081_0001002 3300049743 Bacteria 16840
300 Ga0501081_0002137 3300049743 Bacteria 12374
301 Ga0501081_0007710 3300049743 Bacteria 6980
302 Ga0501081_0008051 3300049743 Bacteria 6839
303 Ga0501081_0014374 3300049743 Bacteria 5221
304 Ga0501044_0046616 3300049823 Bacteria 4487
305 Ga0501045_0000203 3300049824 Bacteria 33847
306 Ga0501045_0000438 3300049824 Bacteria 25526
307 Ga0501045_0041655 3300049824 Bacteria 3341
308 nmdc:mga05p37_10630_c1 3300050507 Bacteria 10919
309 nmdc:mga05p37_12883_c1 3300050507 Bacteria 9999
310 nmdc:mga05p37_976_c1 3300050507 Bacteria 32490
311 nmdc:mga09592_10_c1 3300050508 Bacteria 106937
312 nmdc:mga09592_355_c1 3300050508 Bacteria 33629
313 nmdc:mga09592_63597_c1 3300050508 Bacteria 3124
314 nmdc:mga0qj67_3867_c1 3300050509 Bacteria 10817
315 nmdc:mga06r32_1279_c1 3300050510 Bacteria 22640
316 nmdc:mga06r32_24155_c1 3300050510 Bacteria 5636
317 nmdc:mga06r32_42720_c1 3300050510 Bacteria 4312
318 nmdc:mga08y16_11063_c1 3300050511 Bacteria 9474
319 nmdc:mga08y16_2521_c1 3300050511 Bacteria 18816
320 nmdc:mga08y16_26507_c1 3300050511 Bacteria 6110
321 nmdc:mga08y16_3067_c1 3300050511 Bacteria 17268
322 nmdc:mga0n895_11306_c1 3300050512 Bacteria 7955
323 nmdc:mga0n895_3499_c1 3300050512 Bacteria 12688
324 nmdc:mga0rr50_2558_c1 3300050513 Bacteria 10305
325 nmdc:mga08x19_15105_c1 3300050514 Bacteria 4693
326 nmdc:mga08x19_8960_c1 3300050514 Bacteria 5971
327 nmdc:mga0a205_18977_c1 3300050515 Bacteria 6478
328 nmdc:mga0a205_19914_c1 3300050515 Bacteria 6329
329 Ga0495601_0001071 3300053077 Bacteria 14992
330 Ga0495601_0015240 3300053077 Bacteria 4644
331 Ga0495601_0028343 3300053077 Bacteria 3469
332 Ga0495595_0002613 3300053084 Bacteria 7060
333 Ga0495619_0001844 3300053085 Bacteria 14101
334 Ga0500616_0000212 3300053153 Bacteria 93017
335 Ga0501084_0000408 3300054114 Bacteria 33211
336 Ga0590071_003775 3300059421 Bacteria 3716
337 Ga0501082_0000215 3300060353 Bacteria 50556
338 Ga0501082_0000619 3300060353 Bacteria 31222
339 Ga0501082_0003041 3300060353 Bacteria 14659
340 Ga0501082_0004940 3300060353 Bacteria 11633
341 Ga0501082_0005685 3300060353 Bacteria 10819
342 Ga0501082_0007376 3300060353 Bacteria 9489
343 Ga0501082_0015417 3300060353 Bacteria 6578
344 Ga0530510_0000117 3300061734 Bacteria 45062
345 Ga0530510_0000257 3300061734 Bacteria 33336
346 Ga0530510_0034719 3300061734 Bacteria 3633
347 Ga0207687_10016961
348 Ga0055540_1001161
349 Ga0055531_10000211
350 Ga0070683_100021069
351 Ga0070690_100000352
352 Ga0070690_100008314
353 Ga0068869_100000512
354 Ga0070680_100001459
355 Ga0068868_100000262
356 Ga0070689_100003157
357 Ga0070691_10004014
358 Ga0070692_10006581
359 Ga0070692_10016672
360 Ga0070668_100015344
361 Ga0070669_100001314
362 Ga0070701_10000307
363 Ga0070701_10001019
364 Ga0070705_100000343
365 Ga0070705_100002561
366 Ga0070700_100000221
367 Ga0070700_100000230
368 Ga0070700_100007137
369 Ga0070694_100000253
370 Ga0070694_100008113
371 Ga0070694_100025669
372 Ga0070694_100040491
373 Ga0070681_10000615
374 Ga0070681_10047443
375 Ga0068867_100001201
376 Ga0068867_100002103
377 Ga0070697_100001109
378 Ga0070686_100000370
379 Ga0070686_100003351
380 Ga0070695_100000423
381 Ga0070695_100004329
382 Ga0070696_100000073
383 Ga0070696_100003689
384 Ga0070696_100025869
385 Ga0070696_100030016
386 Ga0070693_100000443
387 Ga0070704_100001092
388 Ga0070704_100009570
389 Ga0068855_100004746
390 Ga0070702_100001247
391 Ga0068859_100001384
392 Ga0068866_10000217
393 Ga0068861_100000142
394 Ga0068861_100000311
395 Ga0068858_100003054
396 Ga0068858_100015029
397 Ga0068860_100001142
398 Ga0068862_100001915
399 Ga0068862_100002479
400 Ga0081539_10000004
401 Ga0081539_10000178
402 Ga0070716_100003846
403 Ga0070716_100010078
404 Ga0097621_100002277
405 Ga0097621_100002990
406 Ga0068871_100000331
407 Ga0068871_100001696
408 Ga0068871_100010333
409 Ga0075428_100002006
410 Ga0075428_100015062
411 Ga0075428_100037605
412 Ga0075430_100005926
413 Ga0075430_100014994
414 Ga0075430_100016113
415 Ga0075430_100026504
416 Ga0075431_100001787
417 Ga0075431_100021640
418 Ga0075431_100026646
419 Ga0075431_100078799
420 Ga0075433_10018143
421 Ga0075434_100000784
422 Ga0075434_100007320
423 Ga0075429_100000003
424 Ga0075429_100000167
425 Ga0068865_100000456
426 Ga0075436_100008333
427 Ga0075436_100010157
428 Ga0075436_100016238
429 Ga0097620_100001384
430 Ga0075435_100000429
431 Ga0111539_10001073
432 Ga0111539_10004725
433 Ga0111539_10005067
434 Ga0111539_10032660
435 Ga0111539_10040944
436 Ga0111539_10042819
437 Ga0111539_10111002
438 Ga0105245_10000576
439 Ga0114129_10007217
440 Ga0114129_10035845
441 Ga0105243_10000974
442 Ga0105243_10007202
443 Ga0105242_10001474
444 Ga0105242_10003211
445 Ga0105249_10003893
446 Ga0105249_10005297
447 Ga0157378_10000814
448 Ga0157378_10010650
449 Ga0163163_10033665
450 Ga0157380_10004547
451 Ga0157376_10001072
452 Ga0209051_1000115
453 Ga0209257_1000055
454 Ga0207660_10001194
455 Ga0207662_10000112
456 Ga0207681_10000523
457 Ga0207709_10001456
458 Ga0207709_10002770
459 Ga0207670_10002135
460 Ga0207704_10000301
461 Ga0207704_10000910
462 Ga0207691_10056690
463 Ga0207689_10001636
464 Ga0207667_10011562
465 Ga0207712_10010145
466 Ga0207668_10012468
467 Ga0207677_10000537
468 Ga0207703_10003759
469 Ga0207708_10000324
470 Ga0207708_10001056
471 Ga0207708_10014052
472 Ga0207641_10025037
473 Ga0207648_10000205
474 Ga0207648_10000680
475 Ga0207675_100000851
476 Ga0207675_100001096
477 Ga0209967_1000703
478 Ga0210000_1001384
479 Ga0207428_10002108
480 Ga0207428_10002931
481 Ga0207428_10003365
482 Ga0268265_10000691
483 Ga0268265_10002780
484 Ga0268264_10001774
485 Ga0307513_10066022
486 Ga0307406_10007847
487 Ga0373934_0000092
488 Ga0373934_0005043
489 Ga0373923_0000715
490 Ga0373936_0006148
491 Ga0373953_0003785
492 Ga0373954_0000523
493 Ga0373954_0001910
494 Ga0373954_0003515
495 Ga0373954_0004325
496 Ga0373956_0000029
497 Ga0373956_0005899
498 Ga0373957_0006228
499 Ga0373955_0001079
500 Ga0373955_0005060
501 Ga0373924_0010448
502 Ga0373931_0000108
503 Ga0373935_0008121
504 Ga0373933_0001487
505 Ga0373933_0002481
506 Ga0373933_0008644
507 Ga0373933_0008888
508 Ga0373947_0021135
509 Ga0373937_0000233
510 Ga0373937_0004813
511 Ga0373937_0026646
512 Ga0395905_0080332
513 Ga0400490_03529
514 Ga0400487_40193
515 Ga0439461_0000569
516 Ga0439434_0000446
517 Ga0439435_0000009
518 Ga0439435_0000030
519 Ga0451577_0000028
520 Ga0451577_0007401
521 Ga0451577_0008011
522 Ga0451577_0046689
523 Ga0453683_0000012
524 Ga0453683_0001746
525 Ga0453683_0008925
526 Ga0453683_0026244
527 Ga0453683_0028300
528 Ga0453684_0000281
529 Ga0453684_0000472
530 Ga0453684_0001149
531 Ga0453684_0001277
532 Ga0453684_0004969
533 Ga0453684_0009820
534 Ga0453684_0010231
535 Ga0453684_0025555
536 Ga0453684_0086554
537 Ga0451576_0000026
538 Ga0451576_0000490
539 Ga0451576_0003297
540 Ga0451576_0020726
541 Ga0495592_0007211
542 Ga0495592_0012567
543 Ga0495641_0002872
544 Ga0495651_0000178
545 Ga0495651_0001600
546 Ga0495651_0002367
547 Ga0495653_0011537
548 Ga0495653_0027606
549 Ga0495580_0020152
550 Ga0495582_0007552
551 Ga0495639_0004318
552 Ga0495662_0016602
553 Ga0495608_0019497
554 Ga0495608_0032251
555 Ga0495618_0008485
556 Ga0495618_0019807
557 Ga0495628_0004302
558 Ga0495628_0012241
559 Ga0495630_0001696
560 Ga0495630_0007741
561 Ga0495630_0038361
562 Ga0495652_0013632
563 Ga0495652_0021622
564 Ga0495665_0011739
565 Ga0495640_0010267
566 Ga0495587_0021492
567 Ga0495645_0002151
568 Ga0495667_0051023
569 Ga0495634_0003720
570 Ga0495657_0015677
571 Ga0495599_0004895
572 Ga0495623_0010279
573 Ga0495647_0003590
574 Ga0495658_0004022
575 Ga0495600_0004915
576 Ga0495604_0037557
577 Ga0495636_0001867
578 Ga0495674_0005529
579 Ga0495680_0004927
580 Ga0495675_0001531
581 Ga0495684_0043764
582 Ga0501033_0022270
583 Ga0501034_0003219
584 Ga0501036_0000101
585 Ga0501036_0021307
586 Ga0501037_0021476
587 Ga0501038_0001381
588 Ga0501038_0056769
589 Ga0501039_0000117
590 Ga0501039_0000129
591 Ga0501039_0000767
592 Ga0501040_0001539
593 Ga0501040_0003368
594 Ga0501041_0000040
595 Ga0501041_0000048
596 Ga0501041_0003178
597 Ga0501041_0003243
598 Ga0501041_0003728
599 Ga0501041_0026252
600 Ga0501041_0027748
601 Ga0501042_0000026
602 Ga0501042_0022660
603 Ga0501043_0003448
604 Ga0501043_0016022
605 Ga0501046_0000705
606 Ga0501046_0005604
607 Ga0501046_0021460
608 Ga0501048_0001332
609 Ga0501048_0006833
610 Ga0501048_0014211
611 Ga0501048_0032021
612 Ga0501071_0000133
613 Ga0501071_0004223
614 Ga0501071_0005450
615 Ga0501071_0016537
616 Ga0501072_0000528
617 Ga0501072_0003663
618 Ga0501072_0008146
619 Ga0501072_0029284
620 Ga0501074_0017163
621 Ga0501075_0000036
622 Ga0501075_0000204
623 Ga0501075_0001062
624 Ga0501075_0001945
625 Ga0501075_0013219
626 Ga0501075_0033535
627 Ga0501076_0000220
628 Ga0501076_0000445
629 Ga0501076_0001309
630 Ga0501076_0001733
631 Ga0501076_0004383
632 Ga0501077_0000855
633 Ga0501077_0004038
634 Ga0501079_0000807
635 Ga0501079_0000879
636 Ga0501079_0001228
637 Ga0501079_0010287
638 Ga0501079_0022470
639 Ga0501080_0003496
640 Ga0501080_0009588
641 Ga0501080_0018468
642 Ga0501080_0056144
643 Ga0501081_0000074
644 Ga0501081_0000160
645 Ga0501081_0001002
646 Ga0501081_0002137
647 Ga0501081_0007710
648 Ga0501081_0008051
649 Ga0501081_0014374
650 Ga0501044_0046616
651 Ga0501045_0000203
652 Ga0501045_0000438
653 Ga0501045_0041655
654 nmdc:mga05p37_10630_c1
655 nmdc:mga05p37_12883_c1
656 nmdc:mga05p37_976_c1
657 nmdc:mga09592_10_c1
658 nmdc:mga09592_355_c1
659 nmdc:mga09592_63597_c1
660 nmdc:mga0qj67_3867_c1
661 nmdc:mga06r32_1279_c1
662 nmdc:mga06r32_24155_c1
663 nmdc:mga06r32_42720_c1
664 nmdc:mga08y16_11063_c1
665 nmdc:mga08y16_2521_c1
666 nmdc:mga08y16_26507_c1
667 nmdc:mga08y16_3067_c1
668 nmdc:mga0n895_11306_c1
669 nmdc:mga0n895_3499_c1
670 nmdc:mga0rr50_2558_c1
671 nmdc:mga08x19_15105_c1
672 nmdc:mga08x19_8960_c1
673 nmdc:mga0a205_18977_c1
674 nmdc:mga0a205_19914_c1
675 Ga0495601_0001071
676 Ga0495601_0015240
677 Ga0495601_0028343
678 Ga0495595_0002613
679 Ga0495619_0001844
680 Ga0500616_0000212
681 Ga0501084_0000408
682 Ga0590071_003775
683 Ga0501082_0000215
684 Ga0501082_0000619
685 Ga0501082_0003041
686 Ga0501082_0004940
687 Ga0501082_0005685
688 Ga0501082_0007376
689 Ga0501082_0015417
690 Ga0530510_0000117
691 Ga0530510_0000257
692 Ga0530510_0034719

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01564

Spermine_synth

Spermine/spermidine synthase domain

568

727

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xj5-assembly1.cif.gz_C x-ray structure of spermidine synthase from arabidopsis thaliana gene at1g23820 0.8713 457 680
6o64-assembly3.cif.gz_E crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8706 457 682
6o64-assembly2.cif.gz_D crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8625 457 682
6o63-assembly1.cif.gz_A crystal structure of arabidopsis thaliana spermidine synthase isoform 1 (atspds1) 0.8622 457 682
6o64-assembly2.cif.gz_C crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8603 454 682
ID Description Score Start End Superfamily
1jq3D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9 503 673 3.40.50.150
af_Q4CXJ6_69_296_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.887 501 678 3.40.50.150
af_B4E3X6_90_272_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8625 503 678 3.40.50.150
af_Q5AL17_111_343_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8491 503 678 3.40.50.150
af_Q57761_62_290_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8452 502 688 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A3C0TDG8-F1-model_v4 Spermidine synthase 0.9784 525 638 GO:0006596
GO:0016740
AF-A0A3C0TDG8-F1-model_v4 Spermidine synthase 0.9617 525 638 GO:0006596
GO:0016740
AF-X0Y7N1-F1-model_v4 PABS domain-containing protein 0.9297 506 687 GO:0006596
AF-A0A7W1PUN8-F1-model_v4 Fused MFS/spermidine synthase 0.9198 228 416 GO:0016020
AF-A0A7V4T4Z8-F1-model_v4 Spermidine synthase (EC 2.5.1.16) 0.9178 457 631 GO:0004766
GO:0005829
GO:0008295

Map