F417598

General Info

Members Datasets Scaffolds Average Seq Length
348 223 696 1016

Family's Representative Sequence

Representative Sequence 3300032004|Ga0307414_10002841|Ga0307414_100028412
Length 1118
Sequence MIRPGNEASIDMNSSFPRRRESLWAFDLGATDDHRQSGNPRRAIPAFAGMTSLFLVAAFMGLISFGAHAQNEPTILDNFNNASAWRVVTSNQVSGNLRQVDGTQGKAVCLDYDFNGVSGYAGIQRDLQIAYPQNYRFDFRLRGDSPENDLQFKLVDASGDNVWWVNKPKYDYPHAWTAVAYKKRHIDKAWGPDPDRVLRNSAKLEFTIYNNAGGKGSVCFDELTFSELPAEDRSPLAATASASVANGSGVAANAVDGDAATAWYADFVAQTQPRLTLDMGKLREFGGLKLAWKDGESASDYLLQLSDDGVRWRDVRTVVGGNGGTDYLALPESEARYLRLSPAAGSGKSFGLAEATVQPLEFAVTPNDFIKSVAKEAPRGWYPRGFTGEQPYWTIVGLDGGSEQALIGEDGAVEVAKGGFSIEPFVIADGKLVTWADVETSQSLQDGYLPIPSVDWKHELFDLQVTAFAQGTPEHSHLVSRYRLTNTGKTPGRFALALAVRPLQVNPPTQFLSTVGGVSEIHGLTVREGNVSVDGVQRVRANSKPLAAFASTFDSGDVVQRLADSEWTSFLDQAETTGVDYPGLDKGEDTVDDQTGLASGALLYRAWLAPGESWEVDLVAPMTGGFDGGLAPPSPLDPAEVLQARVAKQWRDKLDRVHIEVPPQGPALVDTLRTATAHMLISRIGPRLQPGTRSYARSWIRDGAMISEGLLRMGREDVVRDYVEFYAPYQFENGKVPCCVDDRGSDPVPENDSHGELIFNIAELYRYDGDKAFLAKMWPHVLGAYNYMEKLRLSERTDANRALNPAFYGMMPASISHEGYSAKPMHSYWDNFWALRGYKDAVEVAQWLGKAEEAKRFAISRDQFRKDLDDSLRAAAKLHGIDFLPGSAELGDFDATSTTIGLAPGGEQGRLPKDLLGNTFERYWREFEQRRDGKREWKDYTPYEWRNVAAFVRLGWRERAWEAVQFFFKDRAPQPWNQWAEVVSHTPRKPFFVGDLPHAWVASDFVRSALDMFAYTREVDDSIVLAAGIPAGWLEGEGIAIRGLRTPNGKLDYSLRRVDGKLELQVGEGLKLPAGGLVLPWPYASAPGKATVNGKPIPWKEDELRILSLPAKVSIEAK

Samples

Sample ID Description Type Environment
1 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
14 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300012500 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610 Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
54 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
55 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
59 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
66 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
84 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
85 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
90 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
91 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
92 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
95 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
96 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
97 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
98 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
99 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
102 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
103 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
104 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
107 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
108 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
109 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
113 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
114 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
115 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
116 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
117 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
118 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
119 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
120 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
121 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
122 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
123 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
124 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
131 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
132 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
143 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
144 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
145 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
146 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
147 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
148 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
149 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
150 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
151 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
152 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
153 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
160 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
161 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
164 2593339238 Luteibacter sp. UNCMF366Tsu5.1 Isolate Unclassified
165 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
166 2643221559 Lysobacter sp. Root559 Isolate Unclassified
167 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
168 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
169 2643221586 Lysobacter sp. Root667 Isolate Unclassified
170 2643221612 Lysobacter sp. Root76 Isolate Unclassified
171 2643221727 Lysobacter sp. Root96 Isolate Unclassified
172 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
173 2734482264 Dyella sp. AD052 Isolate Unclassified
174 2738541297 Duganella sp. GV083 Isolate Unclassified
175 2738541357 Duganella sp. GV053 Isolate Unclassified
176 2738543003 Duganella sp. GV066 Isolate Unclassified
177 2738543009 Luteibacter sp. OK325 Isolate Unclassified
178 2738543026 Duganella sp. GV089 Isolate Unclassified
179 2738543029 Duganella sp. GV039 Isolate Unclassified
180 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
181 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
182 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
183 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
184 2818991457 Xanthomonas translucens 569 Isolate Unclassified
185 2821131069 Duganella sp. 1224 Isolate Unclassified
186 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
187 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
188 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
189 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
190 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
191 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
192 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
193 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
194 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
195 2885429604 Sphingomonas sp. WZY 27 Isolate Rhizosphere
196 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
197 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
198 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
199 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
200 2904424332 Duganella sp. 1411 Isolate Rhizosphere
201 2919085039 Luteibacter sp. 1214 Isolate Unclassified
202 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
203 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
204 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
205 2919404418 Luteibacter sp. 3190 Isolate Unclassified
206 2919513703 Luteimonas sp. 3794 Isolate Unclassified
207 2919675420 Luteimonas terrae 4099 Isolate Unclassified
208 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
209 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
210 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
211 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
212 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
213 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
214 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
215 2953994433 Luteibacter sp. W1I16 Isolate Rhizosphere
216 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
217 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
218 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
219 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
220 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
221 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
222 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
223 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.32
Metatranscriptomes 1.15
Isolates 17.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.79
Nodule 0.86
Rhizoplane 2.87
Rhizosphere 57.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307414_10002841 3300032004 Bacteria 9136
2 JGI24738J21930_10000004 3300002075 Bacteria 45087
3 JGI25154J39366_1000387 3300002738 Bacteria 24027
4 JGI25152J39213_1000035 3300002773 Bacteria 93806
5 JGI25150J39212_1000111 3300002774 Bacteria 47663
6 JGI25151J46595_10000057 3300003187 Bacteria 151052
7 JGI25153J46596_10000041 3300003215 Bacteria 162103
8 rootH1_10044790 3300003316 Bacteria 4040
9 rootL2_10047765 3300003322 Bacteria 4750
10 Ga0006562J51391_1026446 3300003578 Bacteria 9710
11 Ga0006562J51391_1026448 3300003578 Bacteria 6120
12 Ga0006562J51391_1049726 3300003578 Bacteria 12430
13 Ga0055524_1000025 3300003775 Bacteria 216427
14 Ga0055524_1002665 3300003775 Bacteria 9038
15 Ga0055536_1000659 3300003781 Bacteria 23340
16 Ga0055531_10002769 3300003794 Bacteria 11509
17 Ga0055531_10006126 3300003794 Bacteria 6885
18 Ga0058692_1000006 3300003856 Bacteria 398109
19 Ga0058692_1000012 3300003856 Bacteria 318930
20 Ga0065165_1000035 3300005262 Bacteria 214086
21 Ga0065165_1005133 3300005262 Bacteria 7581
22 Ga0065704_10070355 3300005289 Bacteria 30536
23 Ga0065704_10070494 3300005289 Bacteria 22543
24 Ga0070683_100034286 3300005329 Bacteria 4635
25 Ga0070670_100018153 3300005331 Bacteria 6037
26 Ga0070670_100018426 3300005331 Bacteria 5990
27 Ga0070709_10002889 3300005434 Bacteria 9264
28 Ga0070714_100004155 3300005435 Bacteria 10885
29 Ga0070713_100000148 3300005436 Bacteria 46770
30 Ga0070681_10024935 3300005458 Bacteria 6017
31 Ga0070684_100009746 3300005535 Bacteria 7582
32 Ga0068853_100032985 3300005539 Bacteria 4390
33 Ga0070696_100011025 3300005546 Bacteria 6053
34 Ga0070665_100008988 3300005548 Bacteria 10121
35 Ga0068855_100011586 3300005563 Bacteria 10650
36 Ga0070664_100005148 3300005564 Bacteria 10494
37 Ga0068857_100000777 3300005577 Bacteria 23785
38 Ga0068854_100001127 3300005578 Bacteria 16058
39 Ga0068854_100004740 3300005578 Bacteria 8574
40 Ga0068854_100010432 3300005578 Bacteria 6025
41 Ga0068852_100031307 3300005616 Bacteria 4388
42 Ga0068852_100039768 3300005616 Bacteria 3962
43 Ga0068851_10000226 3300005834 Bacteria 27072
44 Ga0068851_10002104 3300005834 Bacteria 8758
45 Ga0075364_10000329 3300006051 Bacteria 23531
46 Ga0099826_10000005 3300006948 Bacteria 465206
47 Ga0105251_10000261 3300009011 Bacteria 52880
48 Ga0105244_10001315 3300009036 Bacteria 20312
49 Ga0105240_10000197 3300009093 Bacteria 123221
50 Ga0105240_10000199 3300009093 Bacteria 122191
51 Ga0105240_10004124 3300009093 Bacteria 22303
52 Ga0105240_10016502 3300009093 Bacteria 9996
53 Ga0105240_10016657 3300009093 Bacteria 9941
54 Ga0105240_10021739 3300009093 Bacteria 8525
55 Ga0114129_10020665 3300009147 Bacteria 9359
56 Ga0105243_10013090 3300009148 Bacteria 6270
57 Ga0105241_10013582 3300009174 Bacteria 5969
58 Ga0105237_10000212 3300009545 Bacteria 82465
59 Ga0105237_10004560 3300009545 Bacteria 15996
60 Ga0105238_10040924 3300009551 Bacteria 4695
61 Ga0105239_10000054 3300010375 Bacteria 159216
62 Ga0157314_1000043 3300012500 Bacteria 12648
63 Ga0157373_10002118 3300013100 Bacteria 15024
64 Ga0157371_10003827 3300013102 Bacteria 13434
65 Ga0157371_10012445 3300013102 Bacteria 6502
66 Ga0157371_10015468 3300013102 Bacteria 5722
67 Ga0157370_10000114 3300013104 Bacteria 92643
68 Ga0157370_10006412 3300013104 Bacteria 12977
69 Ga0157370_10024251 3300013104 Bacteria 6009
70 Ga0157369_10037862 3300013105 Bacteria 5277
71 Ga0157374_10022659 3300013296 Bacteria 5605
72 Ga0157375_10017904 3300013308 Bacteria 6409
73 Ga0157376_10015154 3300014969 Bacteria 5813
74 Ga0182006_1000036 3300015261 Bacteria 226098
75 Ga0182006_1000167 3300015261 Bacteria 69601
76 Ga0182005_1000019 3300015265 Bacteria 296232
77 Ga0182005_1000311 3300015265 Bacteria 29429
78 Ga0206353_11267361 3300020082 Bacteria 3682
79 Ga0207425_1000044 3300025245 Bacteria 195202
80 Ga0207425_1000179 3300025245 Bacteria 52215
81 Ga0209646_1000010 3300025246 Bacteria 573803
82 Ga0209148_1000968 3300025254 Bacteria 18698
83 Ga0209129_1000044 3300025258 Bacteria 298971
84 Ga0209129_1000422 3300025258 Bacteria 32451
85 Ga0209676_1000024 3300025292 Bacteria 578839
86 Ga0209676_1000279 3300025292 Bacteria 106358
87 Ga0209676_1000886 3300025292 Bacteria 38327
88 Ga0209676_1002562 3300025292 Bacteria 12576
89 Ga0209676_1003326 3300025292 Bacteria 10040
90 Ga0209676_1004578 3300025292 Bacteria 7643
91 Ga0209025_1000012 3300025294 Bacteria 924362
92 Ga0209025_1002534 3300025294 Bacteria 19108
93 Ga0209025_1003133 3300025294 Bacteria 16173
94 Ga0209025_1003229 3300025294 Bacteria 15783
95 Ga0209025_1017018 3300025294 Bacteria 4234
96 Ga0209758_1000018 3300025297 Bacteria 753320
97 Ga0209758_1000408 3300025297 Bacteria 73642
98 Ga0209050_1002042 3300025298 Bacteria 18608
99 Ga0209256_1000040 3300025299 Bacteria 366839
100 Ga0209256_1002071 3300025299 Bacteria 17657
101 Ga0209256_1002825 3300025299 Bacteria 13266
102 Ga0209256_1004651 3300025299 Bacteria 8448
103 Ga0209051_1010249 3300025303 Bacteria 4756
104 Ga0209257_1000251 3300025304 Bacteria 123796
105 Ga0209257_1000693 3300025304 Bacteria 52279
106 Ga0209257_1001098 3300025304 Bacteria 35264
107 Ga0209257_1001477 3300025304 Bacteria 27623
108 Ga0209257_1003684 3300025304 Bacteria 12784
109 Ga0209257_1006069 3300025304 Bacteria 8035
110 Ga0207656_10003628 3300025321 Bacteria 5328
111 Ga0207713_1000598 3300025735 Bacteria 35526
112 Ga0207695_10000207 3300025913 Bacteria 160390
113 Ga0207695_10000746 3300025913 Bacteria 62682
114 Ga0207695_10003455 3300025913 Bacteria 22266
115 Ga0207695_10026577 3300025913 Bacteria 6460
116 Ga0207695_10029898 3300025913 Bacteria 6009
117 Ga0207695_10076231 3300025913 Bacteria 3410
118 Ga0207671_10000009 3300025914 Bacteria 724862
119 Ga0207663_10012965 3300025916 Bacteria 4521
120 Ga0207657_10000428 3300025919 Bacteria 44668
121 Ga0207649_10004989 3300025920 Bacteria 7171
122 Ga0207664_10002862 3300025929 Bacteria 11466
123 Ga0207709_10005407 3300025935 Bacteria 7262
124 Ga0207691_10000928 3300025940 Bacteria 29105
125 Ga0207661_10008625 3300025944 Bacteria 7283
126 Ga0207667_10000063 3300025949 Bacteria 188281
127 Ga0207667_10000359 3300025949 Bacteria 61926
128 Ga0207667_10016262 3300025949 Bacteria 8406
129 Ga0207640_10000198 3300025981 Bacteria 43162
130 Ga0207640_10001043 3300025981 Bacteria 15345
131 Ga0207640_10006727 3300025981 Bacteria 6318
132 Ga0207678_10026479 3300026067 Bacteria 5058
133 Ga0207674_10000123 3300026116 Bacteria 89456
134 Ga0207674_10001026 3300026116 Bacteria 36426
135 Ga0207698_10003455 3300026142 Bacteria 9512
136 Ga0207698_10030989 3300026142 Bacteria 3855
137 Ga0209371_1000007 3300027312 Bacteria 1050654
138 Ga0209371_1000016 3300027312 Bacteria 646301
139 Ga0209282_1000003 3300027666 Bacteria 856377
140 Ga0268256_1000008 3300030500 Bacteria 1050654
141 Ga0268256_1000015 3300030500 Bacteria 646300
142 Ga0307412_10005496 3300031911 Bacteria 7117
143 Ga0307414_10004117 3300032004 Bacteria 7853
144 Ga0307414_10013874 3300032004 Bacteria 4811
145 Ga0395898_0002106 3300037466 Bacteria 24666
146 Ga0395905_0001900 3300037471 Bacteria 24051
147 Ga0395901_0002116 3300038443 Bacteria 20357
148 Ga0395901_0004446 3300038443 Bacteria 14137
149 Ga0395901_0085231 3300038443 Bacteria 3303
150 Ga0237819_00164 3300038705 Bacteria 24369
151 Ga0439436_0000002 3300041404 Bacteria 248787
152 Ga0439465_0000911 3300041413 Bacteria 9347
153 Ga0439465_0003162 3300041413 Bacteria 5374
154 Ga0451791_0151064 3300041451 Bacteria 4243
155 Ga0451793_0170607 3300041452 Bacteria 10562
156 Ga0451793_0755812 3300041452 Bacteria 3688
157 Ga0451797_0623832 3300041453 Bacteria 4487
158 Ga0451800_0555476 3300041459 Bacteria 10541
159 Ga0451806_118632 3300041462 Bacteria 12513
160 Ga0439449_0000009 3300042007 Bacteria 58579
161 Ga0439449_0010690 3300042007 Bacteria 3468
162 Ga0450908_000001 3300042184 Bacteria 100479
163 Ga0466982_0000006 3300044672 Bacteria 333931
164 Ga0466982_0000031 3300044672 Bacteria 48664
165 Ga0466966_0022612 3300044684 Bacteria 4124
166 Ga0466964_0001656 3300044706 Bacteria 7697
167 Ga0495617_000036 3300046452 Bacteria 138126
168 Ga0495617_000050 3300046452 Bacteria 109761
169 Ga0495590_0000032 3300046457 Bacteria 139575
170 Ga0495638_0000217 3300046460 Bacteria 79891
171 Ga0495638_0000562 3300046460 Bacteria 42310
172 Ga0495653_0000081 3300046463 Bacteria 80385
173 Ga0495650_0000479 3300046471 Bacteria 61103
174 Ga0495650_0002890 3300046471 Bacteria 13063
175 Ga0495650_0003511 3300046471 Bacteria 11369
176 Ga0495639_0004429 3300046475 Bacteria 6020
177 Ga0495585_0000134 3300046492 Bacteria 80529
178 Ga0495585_0000782 3300046492 Bacteria 28092
179 Ga0495585_0002069 3300046492 Bacteria 14752
180 Ga0495607_0000002 3300046501 Bacteria 414833
181 Ga0495607_0000039 3300046501 Bacteria 133875
182 Ga0495607_0020299 3300046501 Bacteria 4203
183 Ga0495583_0000145 3300046506 Bacteria 119890
184 Ga0495606_0000107 3300046507 Bacteria 140948
185 Ga0495606_0000310 3300046507 Bacteria 84133
186 Ga0495606_0001037 3300046507 Bacteria 40238
187 Ga0495606_0002407 3300046507 Bacteria 21853
188 Ga0495610_0000003 3300046512 Bacteria 1203910
189 Ga0495610_0001641 3300046512 Bacteria 19663
190 Ga0495616_0000005 3300046513 Bacteria 260589
191 Ga0495620_0000248 3300046515 Bacteria 40332
192 Ga0495620_0002630 3300046515 Bacteria 10382
193 Ga0495631_0000037 3300046518 Bacteria 81401
194 Ga0495631_0000041 3300046518 Bacteria 78909
195 Ga0495632_0000015 3300046519 Bacteria 237713
196 Ga0495632_0018459 3300046519 Bacteria 3828
197 Ga0495637_0013666 3300046520 Bacteria 3848
198 Ga0495643_0001240 3300046522 Bacteria 24490
199 Ga0495648_0000125 3300046524 Bacteria 90565
200 Ga0495648_0000157 3300046524 Bacteria 80874
201 Ga0495648_0008537 3300046524 Bacteria 8047
202 Ga0495663_0001474 3300046525 Bacteria 7412
203 Ga0495642_0000562 3300046528 Bacteria 18766
204 Ga0495597_0000499 3300046542 Bacteria 32860
205 Ga0495622_0000403 3300046557 Bacteria 29141
206 Ga0495633_0000120 3300046558 Bacteria 105485
207 Ga0495633_0006296 3300046558 Bacteria 7070
208 Ga0495668_0000827 3300046616 Bacteria 35377
209 Ga0495668_0001157 3300046616 Bacteria 26970
210 Ga0495668_0001996 3300046616 Bacteria 17845
211 Ga0495611_0000002 3300046648 Bacteria 705677
212 Ga0495611_0000069 3300046648 Bacteria 71918
213 Ga0495625_0000002 3300046660 Bacteria 813323
214 Ga0495625_0000151 3300046660 Bacteria 105938
215 Ga0495625_0024131 3300046660 Bacteria 4634
216 Ga0495661_0000656 3300046665 Bacteria 34794
217 Ga0495671_0000113 3300046692 Bacteria 72284
218 Ga0495589_0000014 3300046794 Bacteria 246197
219 Ga0495660_0000066 3300046810 Bacteria 119694
220 Ga0495660_0000084 3300046810 Bacteria 100402
221 Ga0495660_0013742 3300046810 Bacteria 4692
222 Ga0495683_0000609 3300047323 Bacteria 26771
223 Ga0495683_0010336 3300047323 Bacteria 4936
224 Ga0495687_001044 3300047443 Bacteria 27512
225 Ga0495679_000003 3300047446 Bacteria 787868
226 Ga0495673_0000043 3300047469 Bacteria 284984
227 Ga0495673_0000049 3300047469 Bacteria 265878
228 Ga0495673_0000161 3300047469 Bacteria 115632
229 Ga0495673_0001054 3300047469 Bacteria 24270
230 Ga0495686_0000176 3300047472 Bacteria 121953
231 Ga0495686_0007066 3300047472 Bacteria 8463
232 Ga0495686_0010290 3300047472 Bacteria 6662
233 Ga0496104_0004230 3300048907 Bacteria 12469
234 Ga0496105_0000540 3300048908 Bacteria 24945
235 Ga0496106_0001018 3300048909 Bacteria 20566
236 Ga0496114_0024414 3300048917 Bacteria 4935
237 Ga0496116_0006836 3300048919 Bacteria 10255
238 Ga0496116_0013973 3300048919 Bacteria 6432
239 Ga0496117_0002609 3300048920 Bacteria 22400
240 Ga0496117_0007748 3300048920 Bacteria 10371
241 Ga0496117_0051030 3300048920 Bacteria 2928
242 Ga0496118_0000653 3300048921 Bacteria 56666
243 Ga0496118_0003257 3300048921 Bacteria 20694
244 Ga0496118_0013190 3300048921 Bacteria 7838
245 Ga0496119_0000029 3300048922 Bacteria 243194
246 Ga0496119_0000495 3300048922 Bacteria 53700
247 Ga0496119_0002457 3300048922 Bacteria 20349
248 Ga0496120_0000039 3300048923 Bacteria 202237
249 Ga0496120_0000523 3300048923 Bacteria 59431
250 Ga0496120_0000685 3300048923 Bacteria 49749
251 Ga0496121_0000543 3300048924 Bacteria 71696
252 Ga0496121_0001545 3300048924 Bacteria 38511
253 Ga0496121_0002001 3300048924 Bacteria 32372
254 Ga0496122_0000372 3300048925 Bacteria 96314
255 Ga0496122_0002465 3300048925 Bacteria 26173
256 Ga0496122_0017104 3300048925 Bacteria 6804
257 Ga0496122_0018874 3300048925 Bacteria 6338
258 Ga0496122_0029545 3300048925 Bacteria 4621
259 Ga0496123_0000436 3300048926 Bacteria 74963
260 Ga0496123_0002295 3300048926 Bacteria 24011
261 Ga0496123_0026218 3300048926 Bacteria 4373
262 Ga0496124_0000087 3300048927 Bacteria 200697
263 Ga0496124_0001418 3300048927 Bacteria 35568
264 Ga0496124_0003645 3300048927 Bacteria 18680
265 Ga0496124_0006648 3300048927 Bacteria 12541
266 Ga0496124_0016509 3300048927 Bacteria 7012
267 Ga0496124_0017721 3300048927 Bacteria 6700
268 Ga0496125_0000251 3300048928 Bacteria 110300
269 Ga0496125_0015873 3300048928 Bacteria 7256
270 Ga0496125_0018083 3300048928 Bacteria 6698
271 Ga0496125_0028112 3300048928 Bacteria 5085
272 Ga0496126_0000259 3300048929 Bacteria 113443
273 Ga0496126_0002496 3300048929 Bacteria 24724
274 Ga0495678_000044 3300049459 Bacteria 172592
275 Ga0495682_0000246 3300049460 Bacteria 43120
276 Ga0501034_0000431 3300049571 Bacteria 69520
277 Ga0501034_0000498 3300049571 Bacteria 63644
278 Ga0501034_0029987 3300049571 Bacteria 5529
279 Ga0501043_0001452 3300049579 Bacteria 20714
280 Ga0501269_000079 3300049766 Bacteria 30112
281 nmdc:mga00v17_2107_c1 3300050491 Bacteria 10238
282 nmdc:mga00v17_4104_c1 3300050491 Bacteria 7538
283 Ga0500643_000024 3300053087 Bacteria 265935
284 Ga0500555_001011 3300053103 Bacteria 9594
285 Ga0500634_0000198 3300053161 Bacteria 19488
286 Ga0500645_001879 3300053730 Bacteria 10035
287 Ga0466962_0013149 3300061719 Bacteria 3981
288 2547499972 2547132130 Bacteria 4660562
289 2595448622 2593339238 Bacteria 4182970
290 2595450871 2593339239 Bacteria 4124669
291 2643815160 2643221559 Bacteria 4424915
292 2643908572 2643221579 Bacteria 4443405
293 2643916370 2643221581 Bacteria 3893603
294 2643938047 2643221586 Bacteria 4446529
295 2644076896 2643221612 Bacteria 4361984
296 2644695211 2643221727 Bacteria 4415595
297 2721029550 2718218334 Bacteria 4765486
298 2735834851 2734482264 Unclassified 5014763
299 2738829536 2738541297 Bacteria 6549566
300 2739153332 2738541357 Bacteria 6549408
301 2739195252 2738543003 Bacteria 6549560
302 2739228011 2738543009 Bacteria 4944499
303 2739321728 2738543026 Bacteria 6549408
304 2739339716 2738543029 Bacteria 6549249
305 2747949134 2747842428 Bacteria 4689383
306 2748016081 2747842501 Bacteria 5293829
307 2765579712 2765235840 Bacteria 4663337
308 2816517790 2816332141 Bacteria 4436036
309 2819659883 2818991457 Bacteria 5323295
310 2821131292 2821131069 Bacteria 6108407
311 2842391971 2842391507 Bacteria 4486072
312 2842760085 2842757796 Bacteria 3981385
313 2842783785 2842780639 Bacteria 4337790
314 2842915967 2842914999 Bacteria 4419378
315 2842921241 2842918807 Bacteria 4289178
316 2848297731 2848297114 Bacteria 3608511
317 2852650223 2852649853 Bacteria 4036942
318 2852685288 2852684882 Bacteria 5463342
319 2874222403 2874220319 Bacteria 4594709
320 2885429654 2885429604 Bacteria 3642894
321 2895498900 2895498888 Bacteria 5283788
322 2895511939 2895511927 Bacteria 6802080
323 2895524995 2895522137 Bacteria 3284416
324 2895527882 2895525241 Bacteria 3388457
325 2904426352 2904424332 Bacteria 7633521
326 2919088679 2919085039 Bacteria 4532964
327 2919090341 2919089067 Bacteria 4560942
328 2919131407 2919130084 Bacteria 5301837
329 2919138507 2919134579 Bacteria 4480386
330 2919407294 2919404418 Bacteria 4232372
331 2919516938 2919513703 Bacteria 3844312
332 2919677104 2919675420 Bacteria 3969095
333 2923518152 2923516293 Bacteria 3716336
334 2928497728 2928496128 Bacteria 4631123
335 2929198171 2929195423 Bacteria 5325372
336 2931384139 2931380184 Bacteria 4455911
337 2937614697 2937610967 Bacteria 4618818
338 2939630618 2939626828 Bacteria 4695272
339 2941476475 2941475908 Bacteria 4145589
340 2953996483 2953994433 Bacteria 4303959
341 2961049168 2961047084 Bacteria 4594415
342 2961066133 2961064222 Bacteria 4749990
343 2987606274 2987605356 Bacteria 4187822
344 8002871809 8002869464 Bacteria 3588529
345 8003014474 8003014200 Bacteria 4059994
346 8021624776 8021622325 Bacteria 4844743
347 8021629990 8021626552 Bacteria 4665214
348 8021651381 8021648035 Bacteria 4772378
349 Ga0307414_10002841
350 JGI24738J21930_10000004
351 JGI25154J39366_1000387
352 JGI25152J39213_1000035
353 JGI25150J39212_1000111
354 JGI25151J46595_10000057
355 JGI25153J46596_10000041
356 rootH1_10044790
357 rootL2_10047765
358 Ga0006562J51391_1026446
359 Ga0006562J51391_1026448
360 Ga0006562J51391_1049726
361 Ga0055524_1000025
362 Ga0055524_1002665
363 Ga0055536_1000659
364 Ga0055531_10002769
365 Ga0055531_10006126
366 Ga0058692_1000006
367 Ga0058692_1000012
368 Ga0065165_1000035
369 Ga0065165_1005133
370 Ga0065704_10070355
371 Ga0065704_10070494
372 Ga0070683_100034286
373 Ga0070670_100018153
374 Ga0070670_100018426
375 Ga0070709_10002889
376 Ga0070714_100004155
377 Ga0070713_100000148
378 Ga0070681_10024935
379 Ga0070684_100009746
380 Ga0068853_100032985
381 Ga0070696_100011025
382 Ga0070665_100008988
383 Ga0068855_100011586
384 Ga0070664_100005148
385 Ga0068857_100000777
386 Ga0068854_100001127
387 Ga0068854_100004740
388 Ga0068854_100010432
389 Ga0068852_100031307
390 Ga0068852_100039768
391 Ga0068851_10000226
392 Ga0068851_10002104
393 Ga0075364_10000329
394 Ga0099826_10000005
395 Ga0105251_10000261
396 Ga0105244_10001315
397 Ga0105240_10000197
398 Ga0105240_10000199
399 Ga0105240_10004124
400 Ga0105240_10016502
401 Ga0105240_10016657
402 Ga0105240_10021739
403 Ga0114129_10020665
404 Ga0105243_10013090
405 Ga0105241_10013582
406 Ga0105237_10000212
407 Ga0105237_10004560
408 Ga0105238_10040924
409 Ga0105239_10000054
410 Ga0157314_1000043
411 Ga0157373_10002118
412 Ga0157371_10003827
413 Ga0157371_10012445
414 Ga0157371_10015468
415 Ga0157370_10000114
416 Ga0157370_10006412
417 Ga0157370_10024251
418 Ga0157369_10037862
419 Ga0157374_10022659
420 Ga0157375_10017904
421 Ga0157376_10015154
422 Ga0182006_1000036
423 Ga0182006_1000167
424 Ga0182005_1000019
425 Ga0182005_1000311
426 Ga0206353_11267361
427 Ga0207425_1000044
428 Ga0207425_1000179
429 Ga0209646_1000010
430 Ga0209148_1000968
431 Ga0209129_1000044
432 Ga0209129_1000422
433 Ga0209676_1000024
434 Ga0209676_1000279
435 Ga0209676_1000886
436 Ga0209676_1002562
437 Ga0209676_1003326
438 Ga0209676_1004578
439 Ga0209025_1000012
440 Ga0209025_1002534
441 Ga0209025_1003133
442 Ga0209025_1003229
443 Ga0209025_1017018
444 Ga0209758_1000018
445 Ga0209758_1000408
446 Ga0209050_1002042
447 Ga0209256_1000040
448 Ga0209256_1002071
449 Ga0209256_1002825
450 Ga0209256_1004651
451 Ga0209051_1010249
452 Ga0209257_1000251
453 Ga0209257_1000693
454 Ga0209257_1001098
455 Ga0209257_1001477
456 Ga0209257_1003684
457 Ga0209257_1006069
458 Ga0207656_10003628
459 Ga0207713_1000598
460 Ga0207695_10000207
461 Ga0207695_10000746
462 Ga0207695_10003455
463 Ga0207695_10026577
464 Ga0207695_10029898
465 Ga0207695_10076231
466 Ga0207671_10000009
467 Ga0207663_10012965
468 Ga0207657_10000428
469 Ga0207649_10004989
470 Ga0207664_10002862
471 Ga0207709_10005407
472 Ga0207691_10000928
473 Ga0207661_10008625
474 Ga0207667_10000063
475 Ga0207667_10000359
476 Ga0207667_10016262
477 Ga0207640_10000198
478 Ga0207640_10001043
479 Ga0207640_10006727
480 Ga0207678_10026479
481 Ga0207674_10000123
482 Ga0207674_10001026
483 Ga0207698_10003455
484 Ga0207698_10030989
485 Ga0209371_1000007
486 Ga0209371_1000016
487 Ga0209282_1000003
488 Ga0268256_1000008
489 Ga0268256_1000015
490 Ga0307412_10005496
491 Ga0307414_10004117
492 Ga0307414_10013874
493 Ga0395898_0002106
494 Ga0395905_0001900
495 Ga0395901_0002116
496 Ga0395901_0004446
497 Ga0395901_0085231
498 Ga0237819_00164
499 Ga0439436_0000002
500 Ga0439465_0000911
501 Ga0439465_0003162
502 Ga0451791_0151064
503 Ga0451793_0170607
504 Ga0451793_0755812
505 Ga0451797_0623832
506 Ga0451800_0555476
507 Ga0451806_118632
508 Ga0439449_0000009
509 Ga0439449_0010690
510 Ga0450908_000001
511 Ga0466982_0000006
512 Ga0466982_0000031
513 Ga0466966_0022612
514 Ga0466964_0001656
515 Ga0495617_000036
516 Ga0495617_000050
517 Ga0495590_0000032
518 Ga0495638_0000217
519 Ga0495638_0000562
520 Ga0495653_0000081
521 Ga0495650_0000479
522 Ga0495650_0002890
523 Ga0495650_0003511
524 Ga0495639_0004429
525 Ga0495585_0000134
526 Ga0495585_0000782
527 Ga0495585_0002069
528 Ga0495607_0000002
529 Ga0495607_0000039
530 Ga0495607_0020299
531 Ga0495583_0000145
532 Ga0495606_0000107
533 Ga0495606_0000310
534 Ga0495606_0001037
535 Ga0495606_0002407
536 Ga0495610_0000003
537 Ga0495610_0001641
538 Ga0495616_0000005
539 Ga0495620_0000248
540 Ga0495620_0002630
541 Ga0495631_0000037
542 Ga0495631_0000041
543 Ga0495632_0000015
544 Ga0495632_0018459
545 Ga0495637_0013666
546 Ga0495643_0001240
547 Ga0495648_0000125
548 Ga0495648_0000157
549 Ga0495648_0008537
550 Ga0495663_0001474
551 Ga0495642_0000562
552 Ga0495597_0000499
553 Ga0495622_0000403
554 Ga0495633_0000120
555 Ga0495633_0006296
556 Ga0495668_0000827
557 Ga0495668_0001157
558 Ga0495668_0001996
559 Ga0495611_0000002
560 Ga0495611_0000069
561 Ga0495625_0000002
562 Ga0495625_0000151
563 Ga0495625_0024131
564 Ga0495661_0000656
565 Ga0495671_0000113
566 Ga0495589_0000014
567 Ga0495660_0000066
568 Ga0495660_0000084
569 Ga0495660_0013742
570 Ga0495683_0000609
571 Ga0495683_0010336
572 Ga0495687_001044
573 Ga0495679_000003
574 Ga0495673_0000043
575 Ga0495673_0000049
576 Ga0495673_0000161
577 Ga0495673_0001054
578 Ga0495686_0000176
579 Ga0495686_0007066
580 Ga0495686_0010290
581 Ga0496104_0004230
582 Ga0496105_0000540
583 Ga0496106_0001018
584 Ga0496114_0024414
585 Ga0496116_0006836
586 Ga0496116_0013973
587 Ga0496117_0002609
588 Ga0496117_0007748
589 Ga0496117_0051030
590 Ga0496118_0000653
591 Ga0496118_0003257
592 Ga0496118_0013190
593 Ga0496119_0000029
594 Ga0496119_0000495
595 Ga0496119_0002457
596 Ga0496120_0000039
597 Ga0496120_0000523
598 Ga0496120_0000685
599 Ga0496121_0000543
600 Ga0496121_0001545
601 Ga0496121_0002001
602 Ga0496122_0000372
603 Ga0496122_0002465
604 Ga0496122_0017104
605 Ga0496122_0018874
606 Ga0496122_0029545
607 Ga0496123_0000436
608 Ga0496123_0002295
609 Ga0496123_0026218
610 Ga0496124_0000087
611 Ga0496124_0001418
612 Ga0496124_0003645
613 Ga0496124_0006648
614 Ga0496124_0016509
615 Ga0496124_0017721
616 Ga0496125_0000251
617 Ga0496125_0015873
618 Ga0496125_0018083
619 Ga0496125_0028112
620 Ga0496126_0000259
621 Ga0496126_0002496
622 Ga0495678_000044
623 Ga0495682_0000246
624 Ga0501034_0000431
625 Ga0501034_0000498
626 Ga0501034_0029987
627 Ga0501043_0001452
628 Ga0501269_000079
629 nmdc:mga00v17_2107_c1
630 nmdc:mga00v17_4104_c1
631 Ga0500643_000024
632 Ga0500555_001011
633 Ga0500634_0000198
634 Ga0500645_001879
635 Ga0466962_0013149
636 2547499972
637 2595448622
638 2595450871
639 2643815160
640 2643908572
641 2643916370
642 2643938047
643 2644076896
644 2644695211
645 2721029550
646 2735834851
647 2738829536
648 2739153332
649 2739195252
650 2739228011
651 2739321728
652 2739339716
653 2747949134
654 2748016081
655 2765579712
656 2816517790
657 2819659883
658 2821131292
659 2842391971
660 2842760085
661 2842783785
662 2842915967
663 2842921241
664 2848297731
665 2852650223
666 2852685288
667 2874222403
668 2885429654
669 2895498900
670 2895511939
671 2895524995
672 2895527882
673 2904426352
674 2919088679
675 2919090341
676 2919131407
677 2919138507
678 2919407294
679 2919516938
680 2919677104
681 2923518152
682 2928497728
683 2929198171
684 2931384139
685 2937614697
686 2939630618
687 2941476475
688 2953996483
689 2961049168
690 2961066133
691 2987606274
692 8002871809
693 8003014474
694 8021624776
695 8021629990
696 8021651381

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22633

F5_F8_type_C_2

NedA-like, galactose-binding domain

253

340

0.97

PF24607

233

322

0.9

PF00754

F5_F8_type_C

F5/8 type C domain

237

355

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6r31-assembly1.cif.gz_A family 11 carbohydrate-binding module from clostridium thermocellum in complex with beta-1,3-1,4-mixed-linked tetrasaccharide 0.7881 48 253
1v0a-assembly1.cif.gz_A family 11 carbohydrate-binding module of cellulosomal cellulase lic26a-cel5e of clostridium thermocellum 0.7646 45 254
6r31-assembly1.cif.gz_A family 11 carbohydrate-binding module from clostridium thermocellum in complex with beta-1,3-1,4-mixed-linked tetrasaccharide 0.7502 48 253
1v0a-assembly1.cif.gz_A family 11 carbohydrate-binding module of cellulosomal cellulase lic26a-cel5e of clostridium thermocellum 0.7365 45 254
7qsj-assembly2.cif.gz_B methylmannose polysaccharide hydrolase mmph from m. hassiacum 0.7141 536 892
ID Description Score Start End Superfamily
1v0aA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding lectin 0.7578 45 255 2.60.120.430
1v0aA01 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding lectin 0.7495 45 255 2.60.120.430
af_Q59005_266_613_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.7233 553 889 1.50.10.10
af_Q9NA93_425_554_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.7167 52 250 2.60.120.200
af_Q59005_266_613_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.6988 553 889 1.50.10.10
ID Description Score Start End GO Terms
AF-A0A1F8IRM6-F1-model_v4 deleted 0.9774 294 980
AF-A0A536U4I8-F1-model_v4 Discoidin domain-containing protein 0.9726 631 743 GO:0005975
AF-A0A1G7SVT9-F1-model_v4 Uncharacterized protein 0.9723 26 981 GO:0005975
AF-A0A1J5FGG1-F1-model_v4 Uncharacterized protein 0.9712 286 981 GO:0005975
AF-A0A2J6HJ58-F1-model_v4 Coagulation factor 5/8 type domain-containing protein 0.9703 568 981 GO:0005975

Map