F417671

General Info

Members Datasets Scaffolds Average Seq Length
348 201 696 291

Family's Representative Sequence

Representative Sequence 3300046525|Ga0495663_0010298|Ga0495663_0010298_1496_2488
Length 330
Sequence MAGPDRPNSSRHLDGITEGTMRVDPLGNQQAAPQRRGFGFGGMRWLILILFAGYAAWSWFGSAKTDPYTGETAHYGASPEEEVELGAQAYQQVQSDASAQGALLPPNSQVSQQIREIASRLVNRVPQVTADLAAMNQQQAPTDYQNFQWDVSVIQSEEANAFCLPGGKMAVYTGLIPIAENQNGMAVVMGHEIAHALLRHGSQRMAQQKLVQVGQMAAGVALGGMDPQQQQAVMAALGAGAQYGFILPYGRNHETQADKVGLMLAAAACYDPREAIPLWERMAQLGGGERPPEFASTHPDPANRIQTLQSLMPTALEFYSKYCPGQPPLK

Samples

Sample ID Description Type Environment
1 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
10 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
13 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
38 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
41 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
42 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
48 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
50 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
52 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
59 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
60 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
61 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
62 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
63 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
64 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
65 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
66 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
69 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
70 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
76 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
77 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
78 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
79 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
80 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
81 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
82 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
83 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
84 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
85 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
86 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
87 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
88 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
89 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
90 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
91 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
92 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
93 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
94 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
95 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
96 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
97 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
100 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
103 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
108 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
109 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
110 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
113 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
114 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
115 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
116 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
117 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
118 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
119 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
120 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
121 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
122 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
123 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
124 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
125 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
126 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
142 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
143 2524614729 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
144 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
145 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
146 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
147 2627854209 Arenimonas oryziterrae YC6267, DSM 21050 Isolate Rhizosphere
148 2643221559 Lysobacter sp. Root559 Isolate Unclassified
149 2643221573 Lysobacter sp. Root604 Isolate Unclassified
150 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
151 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
152 2643221586 Lysobacter sp. Root667 Isolate Unclassified
153 2643221593 Lysobacter sp. Root690 Isolate Unclassified
154 2643221612 Lysobacter sp. Root76 Isolate Unclassified
155 2643221695 Lysobacter sp. Root494 Isolate Unclassified
156 2643221720 Lysobacter sp. Root916 Isolate Unclassified
157 2643221727 Lysobacter sp. Root96 Isolate Unclassified
158 2643221728 Lysobacter sp. Root983 Isolate Unclassified
159 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
160 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
161 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
162 2818991457 Xanthomonas translucens 569 Isolate Unclassified
163 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
164 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
165 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
166 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
167 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
168 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
169 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
170 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
171 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
172 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
173 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
174 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
175 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
176 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
177 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
178 2919513703 Luteimonas sp. 3794 Isolate Unclassified
179 2919675420 Luteimonas terrae 4099 Isolate Unclassified
180 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
181 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
182 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
183 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
184 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
185 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
186 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
187 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
188 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
189 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
190 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
191 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
192 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
193 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
194 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
195 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
196 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
197 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified
198 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
199 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
200 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
201 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.05
Metatranscriptomes 0
Isolates 16.95

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 18.68
Nodule 0.29
Rhizoplane 4.6
Rhizosphere 46.26
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495663_0010298 3300046525 Bacteria 2599
2 SwRhRL2b_contig_1068643 2162886007 Bacteria 2128
3 SwRhRL2b_contig_729783 2162886007 Bacteria 1775
4 JGI25152J39213_1000074 3300002773 Bacteria 66463
5 JGI25150J39212_1000056 3300002774 Bacteria 66462
6 JGI25151J46595_10000032 3300003187 Bacteria 195408
7 JGI25151J46595_10000178 3300003187 Bacteria 80734
8 JGI25153J46596_10000131 3300003215 Bacteria 80734
9 rootH2_10002262 3300003320 Bacteria 1966
10 rootH2_10002263 3300003320 Bacteria 5621
11 rootH1_10193337 3300003323 Bacteria 5510
12 Ga0055526_1000038 3300003771 Bacteria 131858
13 Ga0055526_1000482 3300003771 Bacteria 31587
14 Ga0055537_1000057 3300003773 Bacteria 81507
15 Ga0055537_1002160 3300003773 Bacteria 6864
16 Ga0055524_1000066 3300003775 Bacteria 131691
17 Ga0055536_1002753 3300003781 Bacteria 9731
18 Ga0055536_1006700 3300003781 Bacteria 5295
19 Ga0055536_1006779 3300003781 Bacteria 5244
20 Ga0055534_1000082 3300003784 Bacteria 75351
21 Ga0055534_1000472 3300003784 Bacteria 22716
22 Ga0055528_1000023 3300003790 Bacteria 131856
23 Ga0055528_1000274 3300003790 Bacteria 43734
24 Ga0055530_10001207 3300003791 Bacteria 19998
25 Ga0055530_10001566 3300003791 Bacteria 16381
26 Ga0055531_10008600 3300003794 Bacteria 5352
27 Ga0055531_10008723 3300003794 Bacteria 5295
28 Ga0055531_10008830 3300003794 Bacteria 5244
29 Ga0055531_10011681 3300003794 Bacteria 4206
30 Ga0055531_10014045 3300003794 Bacteria 3639
31 Ga0058692_1000006 3300003856 Bacteria 398109
32 Ga0058692_1000012 3300003856 Bacteria 318930
33 Ga0065704_10071826 3300005289 Bacteria 9817
34 Ga0065704_10104689 3300005289 Bacteria 2132
35 Ga0070676_10127081 3300005328 Bacteria 1608
36 Ga0070668_100013596 3300005347 Bacteria 6077
37 Ga0070668_100225916 3300005347 Bacteria 1546
38 Ga0070667_100143034 3300005367 Bacteria 2096
39 Ga0070665_100148580 3300005548 Bacteria 2346
40 Ga0070665_100480704 3300005548 Bacteria 1253
41 Ga0068854_100102888 3300005578 Bacteria 2143
42 Ga0068862_100265024 3300005844 Bacteria 1570
43 Ga0075365_10124046 3300006038 Bacteria 1784
44 Ga0075364_10000327 3300006051 Bacteria 23551
45 Ga0075364_10054416 3300006051 Bacteria 2617
46 Ga0075364_10144248 3300006051 Bacteria 1602
47 Ga0075364_10209813 3300006051 Bacteria 1321
48 Ga0075367_10004212 3300006178 Bacteria 6981
49 Ga0105251_10000390 3300009011 Bacteria 42936
50 Ga0105251_10013732 3300009011 Bacteria 4514
51 Ga0105243_10007468 3300009148 Bacteria 8400
52 Ga0105243_10014071 3300009148 Bacteria 6054
53 Ga0157373_10242086 3300013100 Bacteria 1275
54 Ga0157371_10000344 3300013102 Bacteria 59668
55 Ga0157371_10007349 3300013102 Bacteria 8931
56 Ga0157371_10041315 3300013102 Bacteria 3292
57 Ga0157370_10032318 3300013104 Bacteria 5111
58 Ga0157370_10058905 3300013104 Bacteria 3650
59 Ga0157370_10084238 3300013104 Bacteria 2989
60 Ga0157370_10130121 3300013104 Bacteria 2348
61 Ga0157369_10159275 3300013105 Bacteria 2383
62 Ga0182008_10000339 3300014497 Bacteria 36578
63 Ga0182008_10005802 3300014497 Bacteria 6980
64 Ga0182006_1042328 3300015261 Bacteria 1785
65 Ga0182007_10000081 3300015262 Bacteria 73360
66 Ga0182005_1000687 3300015265 Bacteria 15827
67 Ga0183360_10001 3300015689 Bacteria 3943671
68 Ga0163161_10000633 3300017792 Bacteria 28051
69 Ga0163161_10021363 3300017792 Bacteria 4550
70 Ga0163161_10064023 3300017792 Bacteria 2681
71 Ga0207425_1000108 3300025245 Bacteria 77709
72 Ga0209129_1000178 3300025258 Bacteria 92006
73 Ga0209565_1000005 3300025263 Bacteria 947317
74 Ga0209565_1000022 3300025263 Bacteria 390888
75 Ga0209673_1000027 3300025273 Bacteria 360561
76 Ga0209673_1000110 3300025273 Bacteria 181173
77 Ga0209130_1009916 3300025284 Bacteria 2667
78 Ga0209675_1000004 3300025291 Bacteria 947166
79 Ga0209675_1000165 3300025291 Bacteria 81556
80 Ga0209676_1000034 3300025292 Bacteria 460125
81 Ga0209676_1000219 3300025292 Bacteria 125330
82 Ga0209676_1000603 3300025292 Bacteria 53099
83 Ga0209676_1000888 3300025292 Bacteria 38155
84 Ga0209025_1000005 3300025294 Bacteria 1272149
85 Ga0209025_1000012 3300025294 Bacteria 924362
86 Ga0209564_1000050 3300025295 Bacteria 360560
87 Ga0209564_1000541 3300025295 Bacteria 61140
88 Ga0209758_1000018 3300025297 Bacteria 753320
89 Ga0209758_1008022 3300025297 Bacteria 6979
90 Ga0209050_1000578 3300025298 Bacteria 59363
91 Ga0209050_1000850 3300025298 Bacteria 41582
92 Ga0209050_1013921 3300025298 Bacteria 3521
93 Ga0209050_1023031 3300025298 Bacteria 2207
94 Ga0209256_1000031 3300025299 Bacteria 410189
95 Ga0209256_1003460 3300025299 Bacteria 11048
96 Ga0209256_1021833 3300025299 Bacteria 1953
97 Ga0209051_1059656 3300025303 Bacteria 1208
98 Ga0209257_1000263 3300025304 Bacteria 120530
99 Ga0209257_1000839 3300025304 Bacteria 44159
100 Ga0209257_1000879 3300025304 Bacteria 42464
101 Ga0209257_1001220 3300025304 Bacteria 32205
102 Ga0209257_1008532 3300025304 Bacteria 5790
103 Ga0207713_1010061 3300025735 Bacteria 5269
104 Ga0207709_10002504 3300025935 Bacteria 11496
105 Ga0207709_10010258 3300025935 Bacteria 5159
106 Ga0207668_10121687 3300025972 Bacteria 1977
107 Ga0207668_10349824 3300025972 Bacteria 1235
108 Ga0207675_100711649 3300026118 Bacteria 1014
109 Ga0209371_1000007 3300027312 Bacteria 1050654
110 Ga0209371_1000016 3300027312 Bacteria 646301
111 Ga0268256_1000008 3300030500 Bacteria 1050654
112 Ga0268256_1000015 3300030500 Bacteria 646300
113 Ga0316177_1153696 3300030731 Bacteria 3228
114 Ga0316176_1138828 3300030732 Bacteria 1268
115 Ga0314311_1114800 3300030733 Bacteria 1717
116 Ga0316178_1070511 3300030735 Bacteria 2436
117 Ga0316183_1098000 3300030742 Bacteria 2555
118 Ga0316181_1034504 3300030744 Bacteria 5799
119 Ga0307513_10025731 3300031456 Bacteria 6808
120 Ga0307513_10115720 3300031456 Bacteria 2663
121 Ga0307408_100336955 3300031548 Bacteria 1275
122 Ga0307413_10068426 3300031824 Bacteria 2224
123 Ga0307410_10341224 3300031852 Bacteria 1194
124 Ga0307406_10012803 3300031901 Bacteria 4789
125 Ga0307412_10015356 3300031911 Bacteria 4538
126 Ga0307412_10216141 3300031911 Bacteria 1466
127 Ga0307412_10323862 3300031911 Bacteria 1227
128 Ga0307412_10366886 3300031911 Bacteria 1161
129 Ga0307416_100133800 3300032002 Bacteria 2238
130 Ga0307414_10001369 3300032004 Bacteria 12607
131 Ga0307414_10003434 3300032004 Bacteria 8453
132 Ga0307414_10083422 3300032004 Bacteria 2347
133 Ga0307414_10096242 3300032004 Bacteria 2214
134 Ga0307414_10108203 3300032004 Bacteria 2108
135 Ga0307414_10158359 3300032004 Bacteria 1795
136 Ga0307414_10173352 3300032004 Bacteria 1727
137 Ga0307414_10287944 3300032004 Bacteria 1383
138 Ga0307411_10018092 3300032005 Bacteria 4034
139 Ga0307411_10341731 3300032005 Bacteria 1217
140 Ga0237819_00505 3300038705 Bacteria 13123
141 Ga0237819_01766 3300038705 Bacteria 5085
142 Ga0439436_0005013 3300041404 Bacteria 4057
143 Ga0439436_0008524 3300041404 Bacteria 3153
144 Ga0439436_0014194 3300041404 Bacteria 2407
145 Ga0439436_0015332 3300041404 Bacteria 2305
146 Ga0439465_0001813 3300041413 Bacteria 6991
147 Ga0439465_0003508 3300041413 Bacteria 5110
148 Ga0451791_0482406 3300041451 Bacteria 3427
149 Ga0451791_0680636 3300041451 Bacteria 2153
150 Ga0451791_0855226 3300041451 Bacteria 1393
151 Ga0451793_0463907 3300041452 Bacteria 2059
152 Ga0451793_1487343 3300041452 Bacteria 2168
153 Ga0451797_0517037 3300041453 Bacteria 1571
154 Ga0451797_0592484 3300041453 Bacteria 2701
155 Ga0451797_0634329 3300041453 Bacteria 2868
156 Ga0451800_0670067 3300041459 Bacteria 3559
157 Ga0451802_1551064 3300041460 Bacteria 3054
158 Ga0451802_1967912 3300041460 Bacteria 1105
159 Ga0451806_674837 3300041462 Bacteria 2202
160 Ga0451804_0881144 3300041463 Bacteria 2195
161 Ga0451807_0419311 3300041486 Bacteria 2212
162 Ga0451807_0861891 3300041486 Bacteria 2021
163 Ga0451837_0456949 3300041494 Bacteria 3651
164 Ga0451837_0837592 3300041494 Bacteria 1250
165 Ga0451837_0862812 3300041494 Bacteria 1512
166 Ga0451837_1191502 3300041494 Bacteria 1688
167 Ga0451837_1233180 3300041494 Bacteria 1773
168 Ga0451843_0775264 3300041509 Bacteria 3774
169 Ga0439445_0018207 3300042004 Bacteria 1741
170 Ga0439432_010728 3300042006 Bacteria 3168
171 Ga0439432_012262 3300042006 Bacteria 2937
172 Ga0439449_0000032 3300042007 Bacteria 41302
173 Ga0439449_0017664 3300042007 Bacteria 2678
174 Ga0439449_0105134 3300042007 Bacteria 1044
175 Ga0439449_0107692 3300042007 Bacteria 1031
176 Ga0439434_0022738 3300042435 Bacteria 1885
177 Ga0451577_0061953 3300042876 Bacteria 3336
178 Ga0451577_0087094 3300042876 Bacteria 2786
179 Ga0453684_0233760 3300044712 Bacteria 2120
180 Ga0495627_007598 3300046453 Bacteria 4138
181 Ga0495638_0001327 3300046460 Bacteria 22763
182 Ga0495638_0201858 3300046460 Bacteria 1122
183 Ga0495605_0070279 3300046474 Bacteria 1656
184 Ga0495607_0035127 3300046501 Bacteria 3035
185 Ga0495606_0041779 3300046507 Bacteria 3072
186 Ga0495610_0003727 3300046512 Bacteria 11664
187 Ga0495631_0002482 3300046518 Bacteria 10382
188 Ga0495643_0001083 3300046522 Bacteria 27159
189 Ga0495663_0000897 3300046525 Bacteria 10032
190 Ga0495663_0001909 3300046525 Bacteria 6412
191 Ga0495663_0002409 3300046525 Bacteria 5623
192 Ga0495654_0064257 3300046530 Bacteria 1755
193 Ga0495654_0142481 3300046530 Bacteria 1067
194 Ga0495633_0001984 3300046558 Bacteria 14817
195 Ga0495656_0042286 3300046615 Bacteria 1907
196 Ga0495668_0002733 3300046616 Bacteria 14134
197 Ga0495625_0112451 3300046660 Bacteria 1860
198 Ga0495659_0071759 3300046664 Bacteria 1298
199 Ga0495671_0017960 3300046692 Bacteria 3761
200 Ga0495636_0000111 3300047318 Bacteria 34245
201 Ga0495636_0000237 3300047318 Bacteria 21836
202 Ga0495672_0002120 3300047320 Bacteria 18599
203 Ga0495672_0013576 3300047320 Bacteria 5613
204 Ga0495672_0038193 3300047320 Bacteria 2931
205 Ga0495685_056075 3300047447 Bacteria 1332
206 Ga0495681_0052415 3300047470 Bacteria 1915
207 Ga0495686_0003608 3300047472 Bacteria 13272
208 Ga0495686_0070612 3300047472 Bacteria 2151
209 Ga0496114_0001003 3300048917 Bacteria 21163
210 Ga0496116_0003621 3300048919 Bacteria 15184
211 Ga0496116_0008289 3300048919 Bacteria 9034
212 Ga0496116_0009243 3300048919 Bacteria 8432
213 Ga0496116_0048130 3300048919 Bacteria 2863
214 Ga0496117_0000845 3300048920 Bacteria 47376
215 Ga0496117_0001015 3300048920 Bacteria 42934
216 Ga0496117_0006501 3300048920 Bacteria 11788
217 Ga0496117_0016756 3300048920 Bacteria 6160
218 Ga0496117_0039727 3300048920 Bacteria 3468
219 Ga0496117_0101975 3300048920 Bacteria 1812
220 Ga0496118_0001060 3300048921 Bacteria 42963
221 Ga0496118_0002044 3300048921 Bacteria 28528
222 Ga0496118_0004869 3300048921 Bacteria 15632
223 Ga0496118_0012271 3300048921 Bacteria 8246
224 Ga0496118_0037753 3300048921 Bacteria 3882
225 Ga0496118_0037932 3300048921 Bacteria 3870
226 Ga0496118_0075621 3300048921 Bacteria 2400
227 Ga0496118_0160092 3300048921 Bacteria 1393
228 Ga0496119_0001961 3300048922 Bacteria 23396
229 Ga0496119_0002881 3300048922 Bacteria 18359
230 Ga0496119_0020138 3300048922 Bacteria 4877
231 Ga0496120_0000618 3300048923 Bacteria 53642
232 Ga0496120_0000870 3300048923 Bacteria 42759
233 Ga0496121_0001093 3300048924 Bacteria 47915
234 Ga0496121_0007113 3300048924 Bacteria 13584
235 Ga0496121_0007181 3300048924 Bacteria 13494
236 Ga0496121_0040753 3300048924 Bacteria 4069
237 Ga0496122_0000468 3300048925 Bacteria 84377
238 Ga0496122_0001135 3300048925 Bacteria 45756
239 Ga0496122_0003191 3300048925 Bacteria 21871
240 Ga0496122_0007823 3300048925 Bacteria 11745
241 Ga0496122_0017772 3300048925 Bacteria 6616
242 Ga0496122_0019678 3300048925 Bacteria 6153
243 Ga0496123_0000226 3300048926 Bacteria 113889
244 Ga0496123_0000497 3300048926 Bacteria 68228
245 Ga0496123_0003463 3300048926 Bacteria 17650
246 Ga0496123_0037514 3300048926 Bacteria 3420
247 Ga0496123_0180640 3300048926 Bacteria 1102
248 Ga0496124_0000009 3300048927 Bacteria 734820
249 Ga0496124_0000785 3300048927 Bacteria 51854
250 Ga0496124_0000930 3300048927 Bacteria 47209
251 Ga0496124_0006244 3300048927 Bacteria 13052
252 Ga0496124_0006459 3300048927 Bacteria 12768
253 Ga0496124_0006913 3300048927 Bacteria 12193
254 Ga0496124_0018185 3300048927 Bacteria 6593
255 Ga0496124_0043551 3300048927 Bacteria 3858
256 Ga0496124_0065475 3300048927 Bacteria 3030
257 Ga0496124_0247878 3300048927 Bacteria 1319
258 Ga0496124_0248890 3300048927 Bacteria 1316
259 Ga0496124_0280288 3300048927 Bacteria 1215
260 Ga0496125_0001212 3300048928 Bacteria 38782
261 Ga0496125_0009225 3300048928 Bacteria 10191
262 Ga0496125_0016250 3300048928 Bacteria 7154
263 Ga0496125_0023852 3300048928 Bacteria 5638
264 Ga0496125_0036827 3300048928 Bacteria 4262
265 Ga0496126_0000352 3300048929 Bacteria 96433
266 Ga0496126_0010871 3300048929 Bacteria 9486
267 Ga0496126_0031705 3300048929 Bacteria 4988
268 Ga0496126_0374109 3300048929 Bacteria 1161
269 Ga0501290_002218 3300049513 Bacteria 2527
270 Ga0501031_0017425 3300049568 Bacteria 4667
271 Ga0501033_0143483 3300049570 Bacteria 1726
272 Ga0501034_0000261 3300049571 Bacteria 95451
273 Ga0501034_0000545 3300049571 Bacteria 59955
274 Ga0501034_0002420 3300049571 Bacteria 22586
275 Ga0501034_0275525 3300049571 Bacteria 1622
276 Ga0501036_0008361 3300049572 Bacteria 8479
277 Ga0501037_0004462 3300049573 Bacteria 10166
278 Ga0501039_0036131 3300049575 Bacteria 3812
279 Ga0501043_0019479 3300049579 Bacteria 5325
280 Ga0501068_0065688 3300049584 Bacteria 2209
281 Ga0501070_0027428 3300049586 Bacteria 4778
282 Ga0501073_0053171 3300049589 Bacteria 2835
283 Ga0501225_0002471 3300049705 Bacteria 5715
284 Ga0501080_0010549 3300049742 Bacteria 8462
285 Ga0501035_0032020 3300049822 Bacteria 4787
286 Ga0501044_0013407 3300049823 Bacteria 8864
287 nmdc:mga00v17_124259_c1 3300050491 Bacteria 1646
288 nmdc:mga00v17_130421_c2 3300050491 Bacteria 1284
289 Ga0500577_0055740 3300053142 Bacteria 1502
290 2525556732 2524614729 Bacteria 3091755
291 2547500373 2547132130 Bacteria 4660562
292 2572253648 2571042365 Bacteria 3289345
293 2578457695 2576861471 Bacteria 4648976
294 2630648328 2627854209 Bacteria 3093011
295 2643818796 2643221559 Bacteria 4424915
296 2643878460 2643221573 Bacteria 4784121
297 2643908063 2643221579 Bacteria 4443405
298 2643915732 2643221581 Bacteria 3893603
299 2643941049 2643221586 Bacteria 4446529
300 2643975900 2643221593 Bacteria 6296053
301 2644079912 2643221612 Bacteria 4361984
302 2644528954 2643221695 Bacteria 3441323
303 2644659768 2643221720 Bacteria 4694283
304 2644695507 2643221727 Bacteria 4415595
305 2644700491 2643221728 Bacteria 4797149
306 2747948198 2747842428 Bacteria 4689383
307 2765579799 2765235840 Bacteria 4663337
308 2816519149 2816332141 Bacteria 4436036
309 2819660034 2818991457 Bacteria 5323295
310 2842394768 2842391507 Bacteria 4486072
311 2842760034 2842757796 Bacteria 3981385
312 2842780844 2842780639 Bacteria 4337790
313 2852650143 2852649853 Bacteria 4036942
314 2852685150 2852684882 Bacteria 5463342
315 2857445453 2857442823 Bacteria 4562550
316 2874222485 2874220319 Bacteria 4594709
317 2894415425 2894414249 Bacteria 4405451
318 2895504065 2895498888 Bacteria 5283788
319 2895515419 2895511927 Bacteria 6802080
320 2895525070 2895522137 Bacteria 3284416
321 2895527779 2895525241 Bacteria 3388457
322 2919090424 2919089067 Bacteria 4560942
323 2919130690 2919130084 Bacteria 5301837
324 2919137641 2919134579 Bacteria 4480386
325 2919514795 2919513703 Bacteria 3844312
326 2919677419 2919675420 Bacteria 3969095
327 2923518711 2923516293 Bacteria 3716336
328 2928498261 2928496128 Bacteria 4631123
329 2929198307 2929195423 Bacteria 5325372
330 2931384059 2931380184 Bacteria 4455911
331 2937614779 2937610967 Bacteria 4618818
332 2939591021 2939589442 Bacteria 4214238
333 2939625624 2939622612 Bacteria 4698046
334 2939628406 2939626828 Bacteria 4695272
335 2941476557 2941475908 Bacteria 4145589
336 2941491516 2941489479 Bacteria 6313767
337 2961049250 2961047084 Bacteria 4594415
338 2961066051 2961064222 Bacteria 4749990
339 2974308305 2974307012 Bacteria 4172388
340 2977249063 2977247770 Bacteria 4160543
341 2984516485 2984514374 Bacteria 4172479
342 2987606186 2987605356 Bacteria 4187822
343 2995952378 2995948881 Bacteria 6358104
344 8002872370 8002869464 Bacteria 3588529
345 8003016258 8003014200 Bacteria 4059994
346 8021626451 8021622325 Bacteria 4844743
347 8021630180 8021626552 Bacteria 4665214
348 8021650376 8021648035 Bacteria 4772378
349 Ga0495663_0010298
350 SwRhRL2b_contig_1068643
351 SwRhRL2b_contig_729783
352 JGI25152J39213_1000074
353 JGI25150J39212_1000056
354 JGI25151J46595_10000032
355 JGI25151J46595_10000178
356 JGI25153J46596_10000131
357 rootH2_10002262
358 rootH2_10002263
359 rootH1_10193337
360 Ga0055526_1000038
361 Ga0055526_1000482
362 Ga0055537_1000057
363 Ga0055537_1002160
364 Ga0055524_1000066
365 Ga0055536_1002753
366 Ga0055536_1006700
367 Ga0055536_1006779
368 Ga0055534_1000082
369 Ga0055534_1000472
370 Ga0055528_1000023
371 Ga0055528_1000274
372 Ga0055530_10001207
373 Ga0055530_10001566
374 Ga0055531_10008600
375 Ga0055531_10008723
376 Ga0055531_10008830
377 Ga0055531_10011681
378 Ga0055531_10014045
379 Ga0058692_1000006
380 Ga0058692_1000012
381 Ga0065704_10071826
382 Ga0065704_10104689
383 Ga0070676_10127081
384 Ga0070668_100013596
385 Ga0070668_100225916
386 Ga0070667_100143034
387 Ga0070665_100148580
388 Ga0070665_100480704
389 Ga0068854_100102888
390 Ga0068862_100265024
391 Ga0075365_10124046
392 Ga0075364_10000327
393 Ga0075364_10054416
394 Ga0075364_10144248
395 Ga0075364_10209813
396 Ga0075367_10004212
397 Ga0105251_10000390
398 Ga0105251_10013732
399 Ga0105243_10007468
400 Ga0105243_10014071
401 Ga0157373_10242086
402 Ga0157371_10000344
403 Ga0157371_10007349
404 Ga0157371_10041315
405 Ga0157370_10032318
406 Ga0157370_10058905
407 Ga0157370_10084238
408 Ga0157370_10130121
409 Ga0157369_10159275
410 Ga0182008_10000339
411 Ga0182008_10005802
412 Ga0182006_1042328
413 Ga0182007_10000081
414 Ga0182005_1000687
415 Ga0183360_10001
416 Ga0163161_10000633
417 Ga0163161_10021363
418 Ga0163161_10064023
419 Ga0207425_1000108
420 Ga0209129_1000178
421 Ga0209565_1000005
422 Ga0209565_1000022
423 Ga0209673_1000027
424 Ga0209673_1000110
425 Ga0209130_1009916
426 Ga0209675_1000004
427 Ga0209675_1000165
428 Ga0209676_1000034
429 Ga0209676_1000219
430 Ga0209676_1000603
431 Ga0209676_1000888
432 Ga0209025_1000005
433 Ga0209025_1000012
434 Ga0209564_1000050
435 Ga0209564_1000541
436 Ga0209758_1000018
437 Ga0209758_1008022
438 Ga0209050_1000578
439 Ga0209050_1000850
440 Ga0209050_1013921
441 Ga0209050_1023031
442 Ga0209256_1000031
443 Ga0209256_1003460
444 Ga0209256_1021833
445 Ga0209051_1059656
446 Ga0209257_1000263
447 Ga0209257_1000839
448 Ga0209257_1000879
449 Ga0209257_1001220
450 Ga0209257_1008532
451 Ga0207713_1010061
452 Ga0207709_10002504
453 Ga0207709_10010258
454 Ga0207668_10121687
455 Ga0207668_10349824
456 Ga0207675_100711649
457 Ga0209371_1000007
458 Ga0209371_1000016
459 Ga0268256_1000008
460 Ga0268256_1000015
461 Ga0316177_1153696
462 Ga0316176_1138828
463 Ga0314311_1114800
464 Ga0316178_1070511
465 Ga0316183_1098000
466 Ga0316181_1034504
467 Ga0307513_10025731
468 Ga0307513_10115720
469 Ga0307408_100336955
470 Ga0307413_10068426
471 Ga0307410_10341224
472 Ga0307406_10012803
473 Ga0307412_10015356
474 Ga0307412_10216141
475 Ga0307412_10323862
476 Ga0307412_10366886
477 Ga0307416_100133800
478 Ga0307414_10001369
479 Ga0307414_10003434
480 Ga0307414_10083422
481 Ga0307414_10096242
482 Ga0307414_10108203
483 Ga0307414_10158359
484 Ga0307414_10173352
485 Ga0307414_10287944
486 Ga0307411_10018092
487 Ga0307411_10341731
488 Ga0237819_00505
489 Ga0237819_01766
490 Ga0439436_0005013
491 Ga0439436_0008524
492 Ga0439436_0014194
493 Ga0439436_0015332
494 Ga0439465_0001813
495 Ga0439465_0003508
496 Ga0451791_0482406
497 Ga0451791_0680636
498 Ga0451791_0855226
499 Ga0451793_0463907
500 Ga0451793_1487343
501 Ga0451797_0517037
502 Ga0451797_0592484
503 Ga0451797_0634329
504 Ga0451800_0670067
505 Ga0451802_1551064
506 Ga0451802_1967912
507 Ga0451806_674837
508 Ga0451804_0881144
509 Ga0451807_0419311
510 Ga0451807_0861891
511 Ga0451837_0456949
512 Ga0451837_0837592
513 Ga0451837_0862812
514 Ga0451837_1191502
515 Ga0451837_1233180
516 Ga0451843_0775264
517 Ga0439445_0018207
518 Ga0439432_010728
519 Ga0439432_012262
520 Ga0439449_0000032
521 Ga0439449_0017664
522 Ga0439449_0105134
523 Ga0439449_0107692
524 Ga0439434_0022738
525 Ga0451577_0061953
526 Ga0451577_0087094
527 Ga0453684_0233760
528 Ga0495627_007598
529 Ga0495638_0001327
530 Ga0495638_0201858
531 Ga0495605_0070279
532 Ga0495607_0035127
533 Ga0495606_0041779
534 Ga0495610_0003727
535 Ga0495631_0002482
536 Ga0495643_0001083
537 Ga0495663_0000897
538 Ga0495663_0001909
539 Ga0495663_0002409
540 Ga0495654_0064257
541 Ga0495654_0142481
542 Ga0495633_0001984
543 Ga0495656_0042286
544 Ga0495668_0002733
545 Ga0495625_0112451
546 Ga0495659_0071759
547 Ga0495671_0017960
548 Ga0495636_0000111
549 Ga0495636_0000237
550 Ga0495672_0002120
551 Ga0495672_0013576
552 Ga0495672_0038193
553 Ga0495685_056075
554 Ga0495681_0052415
555 Ga0495686_0003608
556 Ga0495686_0070612
557 Ga0496114_0001003
558 Ga0496116_0003621
559 Ga0496116_0008289
560 Ga0496116_0009243
561 Ga0496116_0048130
562 Ga0496117_0000845
563 Ga0496117_0001015
564 Ga0496117_0006501
565 Ga0496117_0016756
566 Ga0496117_0039727
567 Ga0496117_0101975
568 Ga0496118_0001060
569 Ga0496118_0002044
570 Ga0496118_0004869
571 Ga0496118_0012271
572 Ga0496118_0037753
573 Ga0496118_0037932
574 Ga0496118_0075621
575 Ga0496118_0160092
576 Ga0496119_0001961
577 Ga0496119_0002881
578 Ga0496119_0020138
579 Ga0496120_0000618
580 Ga0496120_0000870
581 Ga0496121_0001093
582 Ga0496121_0007113
583 Ga0496121_0007181
584 Ga0496121_0040753
585 Ga0496122_0000468
586 Ga0496122_0001135
587 Ga0496122_0003191
588 Ga0496122_0007823
589 Ga0496122_0017772
590 Ga0496122_0019678
591 Ga0496123_0000226
592 Ga0496123_0000497
593 Ga0496123_0003463
594 Ga0496123_0037514
595 Ga0496123_0180640
596 Ga0496124_0000009
597 Ga0496124_0000785
598 Ga0496124_0000930
599 Ga0496124_0006244
600 Ga0496124_0006459
601 Ga0496124_0006913
602 Ga0496124_0018185
603 Ga0496124_0043551
604 Ga0496124_0065475
605 Ga0496124_0247878
606 Ga0496124_0248890
607 Ga0496124_0280288
608 Ga0496125_0001212
609 Ga0496125_0009225
610 Ga0496125_0016250
611 Ga0496125_0023852
612 Ga0496125_0036827
613 Ga0496126_0000352
614 Ga0496126_0010871
615 Ga0496126_0031705
616 Ga0496126_0374109
617 Ga0501290_002218
618 Ga0501031_0017425
619 Ga0501033_0143483
620 Ga0501034_0000261
621 Ga0501034_0000545
622 Ga0501034_0002420
623 Ga0501034_0275525
624 Ga0501036_0008361
625 Ga0501037_0004462
626 Ga0501039_0036131
627 Ga0501043_0019479
628 Ga0501068_0065688
629 Ga0501070_0027428
630 Ga0501073_0053171
631 Ga0501225_0002471
632 Ga0501080_0010549
633 Ga0501035_0032020
634 Ga0501044_0013407
635 nmdc:mga00v17_124259_c1
636 nmdc:mga00v17_130421_c2
637 Ga0500577_0055740
638 2525556732
639 2547500373
640 2572253648
641 2578457695
642 2630648328
643 2643818796
644 2643878460
645 2643908063
646 2643915732
647 2643941049
648 2643975900
649 2644079912
650 2644528954
651 2644659768
652 2644695507
653 2644700491
654 2747948198
655 2765579799
656 2816519149
657 2819660034
658 2842394768
659 2842760034
660 2842780844
661 2852650143
662 2852685150
663 2857445453
664 2874222485
665 2894415425
666 2895504065
667 2895515419
668 2895525070
669 2895527779
670 2919090424
671 2919130690
672 2919137641
673 2919514795
674 2919677419
675 2923518711
676 2928498261
677 2929198307
678 2931384059
679 2937614779
680 2939591021
681 2939625624
682 2939628406
683 2941476557
684 2941491516
685 2961049250
686 2961066051
687 2974308305
688 2977249063
689 2984516485
690 2987606186
691 2995952378
692 8002872370
693 8003016258
694 8021626451
695 8021630180
696 8021650376

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01435

Peptidase_M48

Peptidase family M48

120

312

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sar-assembly1.cif.gz_A e coli bepa/yfgc 0.7007 69 267
6ait-assembly1.cif.gz_F crystal structure of e. coli bepa 0.6486 70 267
6ait-assembly1.cif.gz_E crystal structure of e. coli bepa 0.6475 72 271
6ait-assembly1.cif.gz_A crystal structure of e. coli bepa 0.6415 70 267
6ait-assembly1.cif.gz_B crystal structure of e. coli bepa 0.6314 71 267
ID Description Score Start End Superfamily
af_K7KY12_259_325_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9584 134 191 3.30.2010.10
af_Q9FLI5_288_365_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9471 133 191 3.30.2010.10
af_Q54HN7_412_496_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9165 92 192 3.30.2010.10
af_Q5A663_136_197_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9151 133 190 3.30.2010.10
af_Q96E52_254_341_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9098 93 192 3.30.2010.10
ID Description Score Start End GO Terms
AF-A0A7C6TCS9-F1-model_v4 M48 family metalloprotease 0.918 69 192 GO:0004222
GO:0016020
GO:0046872
GO:0051603
AF-A0A349RGR1-F1-model_v4 deleted 0.8956 69 200
AF-A0A7Y5RHY9-F1-model_v4 M48 family metalloprotease 0.8938 65 198 GO:0004222
GO:0016020
GO:0046872
GO:0051603
AF-A0A357J493-F1-model_v4 Peptidase 0.8927 71 189 GO:0004222
GO:0016020
GO:0046872
GO:0051603
AF-A0A382XC21-F1-model_v4 Peptidase M48 domain-containing protein 0.8895 70 193 GO:0004222
GO:0005743
GO:0046872
GO:0051603

Map