F418355

General Info

Members Datasets Scaffolds Average Seq Length
350 199 700 189

Family's Representative Sequence

Representative Sequence 3300046453|Ga0495627_001389|Ga0495627_001389_6888_7538
Length 216
Sequence LVEIFPIPLKLSVSKGRPARPPERNFPVVRLNKIYTRTGDDGTTGLVDGSRLPKHAARMEAIGAVDETNSAIGLAVCALVGTPHAATLTRIQNDMFDLGADLATPGDDFAPGEMTLRMVPAQAAWLEAAIDAINEHLAPLRSFILPGGSEAAARVHVARASTRAAERRATALAQQDPINPAALAYLNRLSDYLFVLARAVNRDGADDVLWVPGQNR

Samples

Sample ID Description Type Environment
1 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
98 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
99 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
116 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
119 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
123 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
124 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
125 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
130 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
131 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
132 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
136 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
137 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
138 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
139 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
140 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
141 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
142 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
143 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
153 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
154 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
155 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
158 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
159 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
166 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
174 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
175 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
178 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
179 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
180 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
181 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
184 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
185 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
186 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
187 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
188 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
189 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
190 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
191 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
192 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
193 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
194 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
195 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
196 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
197 2882806704 Pelagerythrobacter rhizovicinus AY-3R Isolate Rhizosphere
198 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
199 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.14
Metatranscriptomes 0.29
Isolates 2.57

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20
Nodule 0.86
Rhizoplane 6
Rhizosphere 65.71
Stem 0
Stem Tuber 0
Unclassified 0.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495627_001389 3300046453 Bacteria 14342
2 SwRhRL2b_contig_2326630 2162886007 Bacteria 2431
3 SwRhRL2b_contig_3020513 2162886007 Bacteria 56863
4 JGI24751J29686_10001045 3300002459 Bacteria 6028
5 Ga0065704_10070157 3300005289 Bacteria 211668
6 Ga0065704_10089484 3300005289 Bacteria 2855
7 Ga0065704_10145428 3300005289 Bacteria 1476
8 Ga0065712_10216759 3300005290 Bacteria 1054
9 Ga0065707_10136544 3300005295 Bacteria 1833
10 Ga0070658_10095340 3300005327 Bacteria 2456
11 Ga0070658_10349862 3300005327 Bacteria 1265
12 Ga0070670_100781670 3300005331 Bacteria 861
13 Ga0070666_10054834 3300005335 Bacteria 2689
14 Ga0070660_100134225 3300005339 Bacteria 1982
15 Ga0070660_100373383 3300005339 Bacteria 1177
16 Ga0070671_100000067 3300005355 Bacteria 70750
17 Ga0070671_100037539 3300005355 Bacteria 4018
18 Ga0070659_100129221 3300005366 Bacteria 2051
19 Ga0070659_100882873 3300005366 Bacteria 781
20 Ga0070667_100000194 3300005367 Bacteria 72751
21 Ga0070667_100001283 3300005367 Bacteria 22714
22 Ga0070667_100031150 3300005367 Bacteria 4446
23 Ga0070667_100233632 3300005367 Bacteria 1640
24 Ga0070705_100042375 3300005440 Bacteria 2602
25 Ga0070708_100498291 3300005445 Bacteria 1149
26 Ga0070663_101174423 3300005455 Bacteria 673
27 Ga0070678_100138410 3300005456 Bacteria 1945
28 Ga0070678_100186987 3300005456 Bacteria 1700
29 Ga0070662_100005654 3300005457 Bacteria 7999
30 Ga0070662_100157135 3300005457 Bacteria 1776
31 Ga0070706_100977300 3300005467 Bacteria 781
32 Ga0070679_100104388 3300005530 Bacteria 2820
33 Ga0070679_100330657 3300005530 Bacteria 1472
34 Ga0070665_100000101 3300005548 Bacteria 159353
35 Ga0070665_100088374 3300005548 Bacteria 3105
36 Ga0070704_100299914 3300005549 Bacteria 1338
37 Ga0068855_100000994 3300005563 Bacteria 35284
38 Ga0068855_100126505 3300005563 Bacteria 2921
39 Ga0070664_100134658 3300005564 Bacteria 2172
40 Ga0068857_100029334 3300005577 Bacteria 4855
41 Ga0068854_100002459 3300005578 Bacteria 11468
42 Ga0068854_100036703 3300005578 Bacteria 3437
43 Ga0068854_100634930 3300005578 Bacteria 915
44 Ga0068856_100002487 3300005614 Bacteria 18972
45 Ga0068856_100153674 3300005614 Bacteria 2311
46 Ga0068852_100000122 3300005616 Bacteria 52368
47 Ga0068852_100006021 3300005616 Bacteria 8736
48 Ga0068852_100026583 3300005616 Bacteria 4707
49 Ga0068852_100273878 3300005616 Bacteria 1625
50 Ga0068859_100158293 3300005617 Bacteria 2343
51 Ga0068861_100735839 3300005719 Bacteria 920
52 Ga0068863_100000006 3300005841 Bacteria 265379
53 Ga0068863_100002945 3300005841 Bacteria 16820
54 Ga0068863_100293708 3300005841 Bacteria 1576
55 Ga0068858_100018018 3300005842 Bacteria 6614
56 Ga0068858_100021830 3300005842 Bacteria 5979
57 Ga0068858_100836950 3300005842 Bacteria 898
58 Ga0068860_100000093 3300005843 Bacteria 150034
59 Ga0068860_100052516 3300005843 Bacteria 3877
60 Ga0068860_100227715 3300005843 Bacteria 1811
61 Ga0068860_100437658 3300005843 Bacteria 1298
62 Ga0068862_100038982 3300005844 Bacteria 4034
63 Ga0068862_100061754 3300005844 Bacteria 3221
64 Ga0068862_100095892 3300005844 Bacteria 2589
65 Ga0075365_10299627 3300006038 Bacteria 1131
66 Ga0075368_10000132 3300006042 Bacteria 19662
67 Ga0075363_100002560 3300006048 Bacteria 7473
68 Ga0075363_100070015 3300006048 Bacteria 1904
69 Ga0075363_100116212 3300006048 Bacteria 1490
70 Ga0075364_10001711 3300006051 Bacteria 12065
71 Ga0075364_10121677 3300006051 Bacteria 1747
72 Ga0075364_10338583 3300006051 Bacteria 1025
73 Ga0075364_10384487 3300006051 Bacteria 957
74 Ga0070715_10200135 3300006163 Bacteria 1014
75 Ga0075362_10000132 3300006177 Bacteria 20486
76 Ga0075362_10000954 3300006177 Bacteria 8834
77 Ga0075362_10007660 3300006177 Bacteria 4101
78 Ga0075362_10127793 3300006177 Bacteria 1207
79 Ga0075367_10000792 3300006178 Bacteria 12441
80 Ga0075369_10012586 3300006186 Bacteria 3342
81 Ga0075369_10301399 3300006186 Bacteria 748
82 Ga0075366_10000070 3300006195 Bacteria 39329
83 Ga0075366_10012475 3300006195 Bacteria 4821
84 Ga0075366_10321932 3300006195 Bacteria 947
85 Ga0075370_10000009 3300006353 Bacteria 97850
86 Ga0075370_10045743 3300006353 Bacteria 2476
87 Ga0075370_10068154 3300006353 Bacteria 2032
88 Ga0075370_10126307 3300006353 Bacteria 1491
89 Ga0075370_10161768 3300006353 Bacteria 1314
90 Ga0075370_10181720 3300006353 Bacteria 1238
91 Ga0068871_100144106 3300006358 Bacteria 2027
92 Ga0097620_100158299 3300006931 Bacteria 2343
93 Ga0079104_1051631 3300006946 Bacteria 914
94 Ga0105251_10000958 3300009011 Bacteria 25704
95 Ga0105240_10007711 3300009093 Bacteria 15575
96 Ga0111539_11295692 3300009094 Bacteria 846
97 Ga0105243_10202813 3300009148 Bacteria 1741
98 Ga0105248_10034222 3300009177 Bacteria 5680
99 Ga0105248_10241158 3300009177 Bacteria 2035
100 Ga0105248_10406590 3300009177 Bacteria 1533
101 Ga0105248_11953183 3300009177 Bacteria 666
102 Ga0105238_10117993 3300009551 Bacteria 2634
103 Ga0105249_10126152 3300009553 Bacteria 2437
104 Ga0105249_10247385 3300009553 Bacteria 1766
105 Ga0105239_10688047 3300010375 Bacteria 1169
106 Ga0105246_10008037 3300011119 Bacteria 6474
107 Ga0157373_10090245 3300013100 Bacteria 2158
108 Ga0157373_10221443 3300013100 Bacteria 1335
109 Ga0157373_10373427 3300013100 Bacteria 1019
110 Ga0157371_10316858 3300013102 Bacteria 1131
111 Ga0157371_10326632 3300013102 Bacteria 1114
112 Ga0157374_11171262 3300013296 Bacteria 790
113 Ga0163162_10137746 3300013306 Bacteria 2552
114 Ga0163162_10157914 3300013306 Bacteria 2389
115 Ga0163162_10389647 3300013306 Bacteria 1526
116 Ga0157372_10180711 3300013307 Bacteria 2442
117 Ga0157375_10141800 3300013308 Bacteria 2530
118 Ga0163163_11222787 3300014325 Bacteria 814
119 Ga0163161_10000848 3300017792 Bacteria 23837
120 Ga0224712_10021874 3300022467 Bacteria 2196
121 Ga0209050_1000267 3300025298 Bacteria 111656
122 Ga0207697_10025265 3300025315 Bacteria 2429
123 Ga0207697_10081060 3300025315 Bacteria 1367
124 Ga0207713_1002357 3300025735 Bacteria 13838
125 Ga0207680_10208775 3300025903 Bacteria 1334
126 Ga0207647_10024745 3300025904 Bacteria 3956
127 Ga0207645_10213840 3300025907 Bacteria 1270
128 Ga0207705_10000037 3300025909 Bacteria 197951
129 Ga0207705_10045006 3300025909 Bacteria 3172
130 Ga0207705_10270650 3300025909 Bacteria 1299
131 Ga0207695_10008598 3300025913 Bacteria 12756
132 Ga0207657_10164513 3300025919 Bacteria 1800
133 Ga0207657_10563471 3300025919 Bacteria 890
134 Ga0207652_10047187 3300025921 Bacteria 3679
135 Ga0207652_10247497 3300025921 Bacteria 1607
136 Ga0207681_10000248 3300025923 Bacteria 41061
137 Ga0207681_10165347 3300025923 Bacteria 1672
138 Ga0207681_10400043 3300025923 Bacteria 1109
139 Ga0207694_10051962 3300025924 Bacteria 3177
140 Ga0207644_10000004 3300025931 Bacteria 566613
141 Ga0207644_10054175 3300025931 Bacteria 2888
142 Ga0207690_10711921 3300025932 Bacteria 826
143 Ga0207690_10876740 3300025932 Bacteria 744
144 Ga0207706_10013298 3300025933 Bacteria 7489
145 Ga0207706_10072170 3300025933 Bacteria 3036
146 Ga0207709_10137185 3300025935 Bacteria 1676
147 Ga0207670_10236221 3300025936 Bacteria 1406
148 Ga0207711_10254724 3300025941 Bacteria 1612
149 Ga0207711_10322775 3300025941 Bacteria 1427
150 Ga0207679_10120808 3300025945 Bacteria 2085
151 Ga0207667_10004486 3300025949 Bacteria 17094
152 Ga0207667_10129051 3300025949 Bacteria 2604
153 Ga0207667_10134437 3300025949 Bacteria 2547
154 Ga0207667_10262888 3300025949 Bacteria 1764
155 Ga0207667_10273778 3300025949 Bacteria 1726
156 Ga0207667_10598662 3300025949 Bacteria 1112
157 Ga0207668_10042554 3300025972 Bacteria 3077
158 Ga0207668_10894140 3300025972 Bacteria 790
159 Ga0207640_10002012 3300025981 Bacteria 10978
160 Ga0207640_10033177 3300025981 Bacteria 3210
161 Ga0207640_10154561 3300025981 Bacteria 1689
162 Ga0207640_10860154 3300025981 Bacteria 789
163 Ga0207658_10000519 3300025986 Bacteria 35139
164 Ga0207658_10001748 3300025986 Bacteria 16348
165 Ga0207658_10654449 3300025986 Bacteria 947
166 Ga0207658_10883184 3300025986 Bacteria 813
167 Ga0207703_10015141 3300026035 Bacteria 6020
168 Ga0207703_10117830 3300026035 Bacteria 2276
169 Ga0207639_10499608 3300026041 Bacteria 1111
170 Ga0207702_10009288 3300026078 Bacteria 8260
171 Ga0207702_10091093 3300026078 Bacteria 2669
172 Ga0207641_10000113 3300026088 Bacteria 119188
173 Ga0207641_10006052 3300026088 Bacteria 10251
174 Ga0207641_10056316 3300026088 Bacteria 3341
175 Ga0207641_10420073 3300026088 Bacteria 1287
176 Ga0207676_10207911 3300026095 Bacteria 1734
177 Ga0207674_10027298 3300026116 Bacteria 6042
178 Ga0207674_10286858 3300026116 Bacteria 1594
179 Ga0207683_10210769 3300026121 Bacteria 1768
180 Ga0207698_10000256 3300026142 Bacteria 32596
181 Ga0209281_1017494 3300027111 Bacteria 1452
182 Ga0209281_1020532 3300027111 Bacteria 1290
183 Ga0209813_10000106 3300027866 Bacteria 31286
184 Ga0268266_10000314 3300028379 Bacteria 76554
185 Ga0268266_10004880 3300028379 Bacteria 12724
186 Ga0268265_10019454 3300028380 Bacteria 4720
187 Ga0268265_10046421 3300028380 Bacteria 3247
188 Ga0268264_10000067 3300028381 Bacteria 284445
189 Ga0268264_10083274 3300028381 Bacteria 2740
190 Ga0268264_10190252 3300028381 Bacteria 1870
191 Ga0268264_10962094 3300028381 Bacteria 859
192 Ga0265327_10017409 3300031251 Bacteria 4511
193 Ga0307408_100358078 3300031548 Bacteria 1240
194 Ga0307508_10034605 3300031616 Bacteria 4554
195 Ga0316576_10035799 3300031727 Bacteria 3547
196 Ga0316578_10156138 3300031728 Bacteria 1375
197 Ga0316578_10413569 3300031728 Unclassified 799
198 Ga0307405_10002368 3300031731 Bacteria 8291
199 Ga0316577_10025846 3300031733 Bacteria 3266
200 Ga0316577_10394678 3300031733 Bacteria 786
201 Ga0307412_10097172 3300031911 Bacteria 2075
202 Ga0307412_10277806 3300031911 Bacteria 1313
203 Ga0307412_10485488 3300031911 Bacteria 1025
204 Ga0307412_10510962 3300031911 Bacteria 1002
205 Ga0307414_10360249 3300032004 Bacteria 1251
206 Ga0307411_10160773 3300032005 Bacteria 1682
207 Ga0307510_10305434 3300033180 Bacteria 1052
208 Ga0316574_0187334 3300035398 Unclassified 1331
209 Ga0373931_0107133 3300035691 Bacteria 1580
210 Ga0316582_0746203 3300036647 Bacteria 672
211 Ga0316584_0019725 3300036712 Bacteria 4876
212 Ga0316584_0180665 3300036712 Bacteria 1562
213 Ga0395898_0074480 3300037466 Bacteria 3279
214 Ga0400489_19380 3300039093 Bacteria 1743
215 Ga0451853_3766453 3300041512 Bacteria 1414
216 Ga0451576_0000024 3300045051 Bacteria 470499
217 Ga0451576_1028849 3300045051 Bacteria 863
218 Ga0495638_0070713 3300046460 Bacteria 2136
219 Ga0495638_0213058 3300046460 Bacteria 1084
220 Ga0495650_0000628 3300046471 Bacteria 47433
221 Ga0495594_0030826 3300046499 Bacteria 2905
222 Ga0495596_0000041 3300046500 Bacteria 93277
223 Ga0495607_0068451 3300046501 Bacteria 1991
224 Ga0495607_0171521 3300046501 Bacteria 1095
225 Ga0495583_0009436 3300046506 Bacteria 5827
226 Ga0495606_0010661 3300046507 Bacteria 7598
227 Ga0495606_0080727 3300046507 Bacteria 2023
228 Ga0495610_0000067 3300046512 Bacteria 123466
229 Ga0495610_0000303 3300046512 Bacteria 51903
230 Ga0495610_0049319 3300046512 Bacteria 2062
231 Ga0495620_0035088 3300046515 Bacteria 2259
232 Ga0495632_0034449 3300046519 Bacteria 2591
233 Ga0495632_0053277 3300046519 Bacteria 1987
234 Ga0495632_0290345 3300046519 Bacteria 727
235 Ga0495643_0000341 3300046522 Bacteria 63337
236 Ga0495643_0002459 3300046522 Bacteria 14660
237 Ga0495643_0064127 3300046522 Bacteria 1941
238 Ga0495609_0001625 3300046538 Bacteria 14655
239 Ga0495597_0028558 3300046542 Bacteria 2553
240 Ga0495668_0038567 3300046616 Bacteria 2669
241 Ga0495625_0013722 3300046660 Bacteria 6495
242 Ga0495625_0072193 3300046660 Bacteria 2421
243 Ga0495625_0119096 3300046660 Bacteria 1798
244 Ga0495671_0035939 3300046692 Bacteria 2513
245 Ga0495681_0000221 3300047470 Bacteria 47433
246 Ga0495615_0000231 3300048090 Bacteria 11802
247 Ga0495626_0000706 3300048091 Bacteria 31641
248 Ga0496100_0120826 3300048903 Bacteria 1832
249 Ga0496100_0175905 3300048903 Bacteria 1545
250 Ga0496101_0077576 3300048904 Bacteria 2448
251 Ga0496101_0194769 3300048904 Bacteria 1565
252 Ga0496102_0122674 3300048905 Bacteria 2428
253 Ga0496102_0397100 3300048905 Bacteria 1297
254 Ga0496102_0702300 3300048905 Bacteria 934
255 Ga0496103_0015514 3300048906 Bacteria 4536
256 Ga0496103_0216675 3300048906 Bacteria 1231
257 Ga0496104_0345458 3300048907 Bacteria 1401
258 Ga0496105_0011831 3300048908 Bacteria 6911
259 Ga0496105_0053675 3300048908 Bacteria 3328
260 Ga0496106_0004167 3300048909 Bacteria 10778
261 Ga0496106_0708898 3300048909 Bacteria 802
262 Ga0496107_0005493 3300048910 Bacteria 8674
263 Ga0496107_0595459 3300048910 Bacteria 817
264 Ga0496109_0645466 3300048912 Bacteria 995
265 Ga0496110_0050107 3300048913 Bacteria 3666
266 Ga0496110_0166108 3300048913 Bacteria 2001
267 Ga0496113_0000807 3300048916 Bacteria 16247
268 Ga0496114_0083660 3300048917 Bacteria 2700
269 Ga0496116_0000045 3300048919 Bacteria 324307
270 Ga0496117_0042491 3300048920 Bacteria 3316
271 Ga0496118_0067151 3300048921 Bacteria 2613
272 Ga0496119_0110559 3300048922 Bacteria 1526
273 Ga0496121_0001835 3300048924 Bacteria 34260
274 Ga0496121_0013329 3300048924 Bacteria 8846
275 Ga0496121_0260371 3300048924 Bacteria 1198
276 Ga0496122_0003948 3300048925 Bacteria 18957
277 Ga0496122_0004408 3300048925 Bacteria 17518
278 Ga0496123_0003066 3300048926 Bacteria 19202
279 Ga0496123_0009493 3300048926 Bacteria 8756
280 Ga0496124_0002656 3300048927 Bacteria 22944
281 Ga0496124_0103843 3300048927 Bacteria 2298
282 Ga0496124_0108725 3300048927 Bacteria 2236
283 Ga0496124_0193168 3300048927 Bacteria 1555
284 Ga0496125_0019374 3300048928 Bacteria 6419
285 Ga0496126_0000483 3300048929 Bacteria 78885
286 Ga0496126_0001006 3300048929 Bacteria 48036
287 Ga0496126_0069120 3300048929 Bacteria 3151
288 Ga0501034_0757736 3300049571 Bacteria 866
289 Ga0501037_0244862 3300049573 Bacteria 1256
290 Ga0501047_0085308 3300049581 Bacteria 3034
291 Ga0501047_0168645 3300049581 Bacteria 2059
292 Ga0501047_0170727 3300049581 Bacteria 2044
293 Ga0501067_0042746 3300049583 Bacteria 2516
294 Ga0501071_0653891 3300049587 Bacteria 809
295 Ga0501035_0188559 3300049822 Bacteria 1774
296 Ga0501044_0001652 3300049823 Bacteria 26175
297 Ga0501044_0473854 3300049823 Bacteria 1156
298 Ga0501044_1193492 3300049823 Bacteria 629
299 nmdc:mga03683_1293_c1 3300050489 Bacteria 4100
300 nmdc:mga03683_191639_c1 3300050489 Bacteria 935
301 nmdc:mga03683_51_c1 3300050489 Bacteria 50013
302 nmdc:mga03683_921_c1 3300050489 Bacteria 8498
303 nmdc:mga03n38_172_c1 3300050490 Bacteria 14385
304 nmdc:mga03n38_32063_c1 3300050490 Bacteria 2223
305 nmdc:mga00v17_107840_c1 3300050491 Bacteria 1764
306 nmdc:mga00v17_354_c3 3300050491 Bacteria 17618
307 nmdc:mga00v17_8353_c1 3300050491 Bacteria 5570
308 nmdc:mga0yw44_274070_c1 3300050492 Bacteria 1127
309 nmdc:mga0k408_11599_c1 3300050493 Bacteria 4803
310 nmdc:mga0k408_25644_c1 3300050493 Bacteria 3340
311 nmdc:mga0k408_3_c1 3300050493 Bacteria 243777
312 nmdc:mga0k408_444383_c1 3300050493 Bacteria 770
313 nmdc:mga06z11_77_c1 3300050494 Bacteria 41112
314 nmdc:mga04h51_238_c1 3300050495 Bacteria 14527
315 nmdc:mga07m45_17_c1 3300050496 Bacteria 140936
316 nmdc:mga07m45_199002_c1 3300050496 Bacteria 1165
317 nmdc:mga07m45_3166_c1 3300050496 Bacteria 7897
318 nmdc:mga07m45_53375_c1 3300050496 Bacteria 2283
319 nmdc:mga07m45_6_c1 3300050496 Bacteria 260521
320 nmdc:mga07m45_86674_c1 3300050496 Bacteria 1791
321 nmdc:mga07m45_92520_c1 3300050496 Bacteria 1733
322 nmdc:mga0sz30_119469_c1 3300050516 Bacteria 1158
323 nmdc:mga0sz30_3767_c1 3300050516 Bacteria 4001
324 nmdc:mga0sz30_73_c1 3300050516 Bacteria 38998
325 Ga0500556_0000088 3300053104 Bacteria 86055
326 Ga0500594_0005477 3300053118 Bacteria 2818
327 Ga0500607_000132 3300053121 Bacteria 61625
328 Ga0500607_001228 3300053121 Bacteria 23562
329 Ga0500608_155472 3300053122 Bacteria 997
330 Ga0500618_000844 3300053125 Bacteria 16595
331 Ga0500618_012377 3300053125 Bacteria 2236
332 Ga0500642_0000001 3300053130 Bacteria 1468402
333 Ga0500559_0001661 3300053136 Bacteria 12307
334 Ga0500559_0002706 3300053136 Bacteria 9004
335 Ga0500568_0110239 3300053139 Bacteria 1029
336 Ga0500590_011499 3300053148 Bacteria 4485
337 Ga0500622_0000166 3300053156 Bacteria 70429
338 Ga0500639_188225 3300053163 Bacteria 903
339 Ga0500637_0004247 3300053178 Bacteria 6767
340 Ga0500645_013821 3300053730 Bacteria 2584
341 Ga0500645_067162 3300053730 Bacteria 1032
342 2511130957 2510917021 Bacteria 5705459
343 2739650679 2739367664 Bacteria 4114334
344 2740029152 2739367865 Bacteria 4114482
345 2819551183 2818991438 Bacteria 5793701
346 2829746565 2829745981 Bacteria 5406054
347 2861691783 2861691609 Bacteria 5628931
348 2882809518 2882806704 Bacteria 3007728
349 2919143148 2919138771 Bacteria 5281312
350 8054306721 8054302542 Bacteria 5698134
351 Ga0495627_001389
352 SwRhRL2b_contig_2326630
353 SwRhRL2b_contig_3020513
354 JGI24751J29686_10001045
355 Ga0065704_10070157
356 Ga0065704_10089484
357 Ga0065704_10145428
358 Ga0065712_10216759
359 Ga0065707_10136544
360 Ga0070658_10095340
361 Ga0070658_10349862
362 Ga0070670_100781670
363 Ga0070666_10054834
364 Ga0070660_100134225
365 Ga0070660_100373383
366 Ga0070671_100000067
367 Ga0070671_100037539
368 Ga0070659_100129221
369 Ga0070659_100882873
370 Ga0070667_100000194
371 Ga0070667_100001283
372 Ga0070667_100031150
373 Ga0070667_100233632
374 Ga0070705_100042375
375 Ga0070708_100498291
376 Ga0070663_101174423
377 Ga0070678_100138410
378 Ga0070678_100186987
379 Ga0070662_100005654
380 Ga0070662_100157135
381 Ga0070706_100977300
382 Ga0070679_100104388
383 Ga0070679_100330657
384 Ga0070665_100000101
385 Ga0070665_100088374
386 Ga0070704_100299914
387 Ga0068855_100000994
388 Ga0068855_100126505
389 Ga0070664_100134658
390 Ga0068857_100029334
391 Ga0068854_100002459
392 Ga0068854_100036703
393 Ga0068854_100634930
394 Ga0068856_100002487
395 Ga0068856_100153674
396 Ga0068852_100000122
397 Ga0068852_100006021
398 Ga0068852_100026583
399 Ga0068852_100273878
400 Ga0068859_100158293
401 Ga0068861_100735839
402 Ga0068863_100000006
403 Ga0068863_100002945
404 Ga0068863_100293708
405 Ga0068858_100018018
406 Ga0068858_100021830
407 Ga0068858_100836950
408 Ga0068860_100000093
409 Ga0068860_100052516
410 Ga0068860_100227715
411 Ga0068860_100437658
412 Ga0068862_100038982
413 Ga0068862_100061754
414 Ga0068862_100095892
415 Ga0075365_10299627
416 Ga0075368_10000132
417 Ga0075363_100002560
418 Ga0075363_100070015
419 Ga0075363_100116212
420 Ga0075364_10001711
421 Ga0075364_10121677
422 Ga0075364_10338583
423 Ga0075364_10384487
424 Ga0070715_10200135
425 Ga0075362_10000132
426 Ga0075362_10000954
427 Ga0075362_10007660
428 Ga0075362_10127793
429 Ga0075367_10000792
430 Ga0075369_10012586
431 Ga0075369_10301399
432 Ga0075366_10000070
433 Ga0075366_10012475
434 Ga0075366_10321932
435 Ga0075370_10000009
436 Ga0075370_10045743
437 Ga0075370_10068154
438 Ga0075370_10126307
439 Ga0075370_10161768
440 Ga0075370_10181720
441 Ga0068871_100144106
442 Ga0097620_100158299
443 Ga0079104_1051631
444 Ga0105251_10000958
445 Ga0105240_10007711
446 Ga0111539_11295692
447 Ga0105243_10202813
448 Ga0105248_10034222
449 Ga0105248_10241158
450 Ga0105248_10406590
451 Ga0105248_11953183
452 Ga0105238_10117993
453 Ga0105249_10126152
454 Ga0105249_10247385
455 Ga0105239_10688047
456 Ga0105246_10008037
457 Ga0157373_10090245
458 Ga0157373_10221443
459 Ga0157373_10373427
460 Ga0157371_10316858
461 Ga0157371_10326632
462 Ga0157374_11171262
463 Ga0163162_10137746
464 Ga0163162_10157914
465 Ga0163162_10389647
466 Ga0157372_10180711
467 Ga0157375_10141800
468 Ga0163163_11222787
469 Ga0163161_10000848
470 Ga0224712_10021874
471 Ga0209050_1000267
472 Ga0207697_10025265
473 Ga0207697_10081060
474 Ga0207713_1002357
475 Ga0207680_10208775
476 Ga0207647_10024745
477 Ga0207645_10213840
478 Ga0207705_10000037
479 Ga0207705_10045006
480 Ga0207705_10270650
481 Ga0207695_10008598
482 Ga0207657_10164513
483 Ga0207657_10563471
484 Ga0207652_10047187
485 Ga0207652_10247497
486 Ga0207681_10000248
487 Ga0207681_10165347
488 Ga0207681_10400043
489 Ga0207694_10051962
490 Ga0207644_10000004
491 Ga0207644_10054175
492 Ga0207690_10711921
493 Ga0207690_10876740
494 Ga0207706_10013298
495 Ga0207706_10072170
496 Ga0207709_10137185
497 Ga0207670_10236221
498 Ga0207711_10254724
499 Ga0207711_10322775
500 Ga0207679_10120808
501 Ga0207667_10004486
502 Ga0207667_10129051
503 Ga0207667_10134437
504 Ga0207667_10262888
505 Ga0207667_10273778
506 Ga0207667_10598662
507 Ga0207668_10042554
508 Ga0207668_10894140
509 Ga0207640_10002012
510 Ga0207640_10033177
511 Ga0207640_10154561
512 Ga0207640_10860154
513 Ga0207658_10000519
514 Ga0207658_10001748
515 Ga0207658_10654449
516 Ga0207658_10883184
517 Ga0207703_10015141
518 Ga0207703_10117830
519 Ga0207639_10499608
520 Ga0207702_10009288
521 Ga0207702_10091093
522 Ga0207641_10000113
523 Ga0207641_10006052
524 Ga0207641_10056316
525 Ga0207641_10420073
526 Ga0207676_10207911
527 Ga0207674_10027298
528 Ga0207674_10286858
529 Ga0207683_10210769
530 Ga0207698_10000256
531 Ga0209281_1017494
532 Ga0209281_1020532
533 Ga0209813_10000106
534 Ga0268266_10000314
535 Ga0268266_10004880
536 Ga0268265_10019454
537 Ga0268265_10046421
538 Ga0268264_10000067
539 Ga0268264_10083274
540 Ga0268264_10190252
541 Ga0268264_10962094
542 Ga0265327_10017409
543 Ga0307408_100358078
544 Ga0307508_10034605
545 Ga0316576_10035799
546 Ga0316578_10156138
547 Ga0316578_10413569
548 Ga0307405_10002368
549 Ga0316577_10025846
550 Ga0316577_10394678
551 Ga0307412_10097172
552 Ga0307412_10277806
553 Ga0307412_10485488
554 Ga0307412_10510962
555 Ga0307414_10360249
556 Ga0307411_10160773
557 Ga0307510_10305434
558 Ga0316574_0187334
559 Ga0373931_0107133
560 Ga0316582_0746203
561 Ga0316584_0019725
562 Ga0316584_0180665
563 Ga0395898_0074480
564 Ga0400489_19380
565 Ga0451853_3766453
566 Ga0451576_0000024
567 Ga0451576_1028849
568 Ga0495638_0070713
569 Ga0495638_0213058
570 Ga0495650_0000628
571 Ga0495594_0030826
572 Ga0495596_0000041
573 Ga0495607_0068451
574 Ga0495607_0171521
575 Ga0495583_0009436
576 Ga0495606_0010661
577 Ga0495606_0080727
578 Ga0495610_0000067
579 Ga0495610_0000303
580 Ga0495610_0049319
581 Ga0495620_0035088
582 Ga0495632_0034449
583 Ga0495632_0053277
584 Ga0495632_0290345
585 Ga0495643_0000341
586 Ga0495643_0002459
587 Ga0495643_0064127
588 Ga0495609_0001625
589 Ga0495597_0028558
590 Ga0495668_0038567
591 Ga0495625_0013722
592 Ga0495625_0072193
593 Ga0495625_0119096
594 Ga0495671_0035939
595 Ga0495681_0000221
596 Ga0495615_0000231
597 Ga0495626_0000706
598 Ga0496100_0120826
599 Ga0496100_0175905
600 Ga0496101_0077576
601 Ga0496101_0194769
602 Ga0496102_0122674
603 Ga0496102_0397100
604 Ga0496102_0702300
605 Ga0496103_0015514
606 Ga0496103_0216675
607 Ga0496104_0345458
608 Ga0496105_0011831
609 Ga0496105_0053675
610 Ga0496106_0004167
611 Ga0496106_0708898
612 Ga0496107_0005493
613 Ga0496107_0595459
614 Ga0496109_0645466
615 Ga0496110_0050107
616 Ga0496110_0166108
617 Ga0496113_0000807
618 Ga0496114_0083660
619 Ga0496116_0000045
620 Ga0496117_0042491
621 Ga0496118_0067151
622 Ga0496119_0110559
623 Ga0496121_0001835
624 Ga0496121_0013329
625 Ga0496121_0260371
626 Ga0496122_0003948
627 Ga0496122_0004408
628 Ga0496123_0003066
629 Ga0496123_0009493
630 Ga0496124_0002656
631 Ga0496124_0103843
632 Ga0496124_0108725
633 Ga0496124_0193168
634 Ga0496125_0019374
635 Ga0496126_0000483
636 Ga0496126_0001006
637 Ga0496126_0069120
638 Ga0501034_0757736
639 Ga0501037_0244862
640 Ga0501047_0085308
641 Ga0501047_0168645
642 Ga0501047_0170727
643 Ga0501067_0042746
644 Ga0501071_0653891
645 Ga0501035_0188559
646 Ga0501044_0001652
647 Ga0501044_0473854
648 Ga0501044_1193492
649 nmdc:mga03683_1293_c1
650 nmdc:mga03683_191639_c1
651 nmdc:mga03683_51_c1
652 nmdc:mga03683_921_c1
653 nmdc:mga03n38_172_c1
654 nmdc:mga03n38_32063_c1
655 nmdc:mga00v17_107840_c1
656 nmdc:mga00v17_354_c3
657 nmdc:mga00v17_8353_c1
658 nmdc:mga0yw44_274070_c1
659 nmdc:mga0k408_11599_c1
660 nmdc:mga0k408_25644_c1
661 nmdc:mga0k408_3_c1
662 nmdc:mga0k408_444383_c1
663 nmdc:mga06z11_77_c1
664 nmdc:mga04h51_238_c1
665 nmdc:mga07m45_17_c1
666 nmdc:mga07m45_199002_c1
667 nmdc:mga07m45_3166_c1
668 nmdc:mga07m45_53375_c1
669 nmdc:mga07m45_6_c1
670 nmdc:mga07m45_86674_c1
671 nmdc:mga07m45_92520_c1
672 nmdc:mga0sz30_119469_c1
673 nmdc:mga0sz30_3767_c1
674 nmdc:mga0sz30_73_c1
675 Ga0500556_0000088
676 Ga0500594_0005477
677 Ga0500607_000132
678 Ga0500607_001228
679 Ga0500608_155472
680 Ga0500618_000844
681 Ga0500618_012377
682 Ga0500642_0000001
683 Ga0500559_0001661
684 Ga0500559_0002706
685 Ga0500568_0110239
686 Ga0500590_011499
687 Ga0500622_0000166
688 Ga0500639_188225
689 Ga0500637_0004247
690 Ga0500645_013821
691 Ga0500645_067162
692 2511130957
693 2739650679
694 2740029152
695 2819551183
696 2829746565
697 2861691783
698 2882809518
699 2919143148
700 8054306721

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01923

Cob_adeno_trans

Cobalamin adenosyltransferase

34

200

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g3k-assembly1.cif.gz_B cryo-em imaging scaffold subunits a and b used to display kras g12c complex with gdp 0.9629 29 175
8g3k-assembly1.cif.gz_A cryo-em imaging scaffold subunits a and b used to display kras g12c complex with gdp 0.9513 30 175
1wy1-assembly1.cif.gz_C crystal structure of the ph0671 protein from pyrococcus horikoshii ot3 0.95 29 173
6c9i-assembly1.cif.gz_C single-particle reconstruction of darp14 - a designed protein scaffold displaying ~17kda darpin proteins - scaffold 0.9471 27 175
4nwp-assembly1.cif.gz_C computationally designed two-component self-assembling tetrahedral cage, t33-21, crystallized in space group r32 0.9468 27 175
ID Description Score Start End Superfamily
5cy5A00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9438 30 175 1.20.1200.10
4nwpB00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.942 27 175 1.20.1200.10
5cy5B00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9397 29 183 1.20.1200.10
2zhzB01 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9387 16 184 1.20.1200.10
5cy5B00 Mainly Alpha;Up-down Bundle;Hypothetical Protein Ta1238; Chain: A;;Cobalamin adenosyltransferase-like 0.9336 29 183 1.20.1200.10
ID Description Score Start End GO Terms
AF-A0A2H6AX01-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9963 91 189 GO:0005524
GO:0008817
GO:0009236
AF-A0A4Q3XWD5-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9931 56 189 GO:0005524
GO:0008817
GO:0009236
AF-A0A4Q3XWD5-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9858 56 189 GO:0005524
GO:0008817
GO:0009236
AF-A0A3D2EC24-F1-model_v4 deleted 0.9853 77 189
AF-A0A2H6AX01-F1-model_v4 Corrinoid adenosyltransferase (EC 2.5.1.17) (Cob(II)alamin adenosyltransferase) (Cob(II)yrinic acid a,c-diamide adenosyltransferase) (Cobinamide/cobalamin adenosyltransferase) 0.9766 91 189 GO:0005524
GO:0008817
GO:0009236

Map