F418490

General Info

Members Datasets Scaffolds Average Seq Length
351 221 702 199

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10073205|Ga0065704_100732052
Length 222
Sequence MAKRNYVSNSTESTRMFKNDFLESLTKVHWSVPLIFYVPVVVFFSYKALVWGEISLMTYLGYFVFGLAFWTAFEYALHRWVFHFHPTSEWGKRIAFIFHGVHHDYPRDRMRLVMPLSASIPLAALVYFGFTLFFSNEFILACFFSGFMIGYLIYDECHYAMHHANFKSGIFKRIKQHHMLHHYSDPEKGFGVSSSLWDEILRSGFEEKEPKKETSTLKEEKA

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
8 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
9 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
10 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
11 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
12 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
22 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
24 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
25 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
28 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
51 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
52 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
53 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
54 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
55 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
56 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
57 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
73 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
76 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
77 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
78 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
79 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
80 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
81 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
82 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
83 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
84 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
85 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
86 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
87 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
88 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
89 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
90 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
93 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
95 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
97 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
139 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
140 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
141 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
142 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
143 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
144 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
145 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
146 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
147 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
148 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
149 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
150 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
151 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
152 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
153 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
154 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
155 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
156 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
157 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
158 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
159 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
160 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
163 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
164 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
165 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
166 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
167 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
168 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
171 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
172 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
173 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
174 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
177 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
178 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
179 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
180 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
181 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
182 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
183 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
184 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
185 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
186 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
187 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
190 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
191 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
192 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
193 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
194 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
195 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
196 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
197 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
198 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
199 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
200 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
201 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
202 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
203 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
204 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
205 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
206 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
207 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
208 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
209 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
210 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
211 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
212 2914759650 Rhizosphaericola mali Isolate Rhizosphere
213 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
214 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
215 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
216 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
217 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
218 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
219 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
220 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
221 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.59
Metatranscriptomes 1.42
Isolates 5.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.68
Nodule 0
Rhizoplane 0.28
Rhizosphere 77.78
Stem 0
Stem Tuber 0
Unclassified 3.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10073205 3300005289 Bacteria 7436
2 JGI24736J21556_1002894 3300001904 Bacteria 3008
3 JGI24740J21852_10026052 3300001979 Bacteria 1963
4 JGI24740J21852_10029325 3300001979 Bacteria 1807
5 JGI24739J22299_10000110 3300001989 Bacteria 25280
6 JGI24739J22299_10019935 3300001989 Bacteria 2398
7 JGI24737J22298_10000110 3300001990 Bacteria 24863
8 JGI24735J21928_10000004 3300002067 Bacteria 381713
9 JGI24744J21845_10006353 3300002077 Bacteria 2453
10 JGI25162J39368_1000017 3300002737 Bacteria 281385
11 JGI25162J39368_1000342 3300002737 Bacteria 40311
12 JGI25157J39369_1007407 3300002741 Bacteria 1586
13 JGI25164J39214_1001206 3300002772 Bacteria 7002
14 JGI25165J46597_1001336 3300003214 Bacteria 13864
15 JGI25153J46596_10043166 3300003215 Bacteria 1369
16 rootH1_10018005 3300003316 Bacteria 14041
17 rootH2_10001334 3300003320 Bacteria 238709
18 rootH2_10016716 3300003320 Bacteria 3207
19 rootH2_10016717 3300003320 Bacteria 1534
20 rootH2_10220308 3300003320 Bacteria 1157
21 rootL2_10113060 3300003322 Bacteria 4785
22 rootL2_10113067 3300003322 Bacteria 1324
23 rootH1_10069372 3300003323 Bacteria 5679
24 rootH1_10210781 3300003323 Bacteria 2621
25 JGI25160J50197_1002302 3300003354 Bacteria 8955
26 Ga0055526_1021090 3300003771 Bacteria 2282
27 Ga0055526_1034007 3300003771 Bacteria 1401
28 Ga0055526_1034799 3300003771 Bacteria 1369
29 Ga0055528_1002314 3300003790 Bacteria 10320
30 Ga0055530_10000813 3300003791 Bacteria 25917
31 Ga0055543_1019215 3300004625 Bacteria 1266
32 Ga0058863_11655734 3300004799 Unclassified 1050
33 Ga0058861_10362865 3300004800 Unclassified 866
34 Ga0058862_11855584 3300004803 Bacteria 707
35 Ga0058862_11871750 3300004803 Bacteria 1761
36 Ga0065165_1000053 3300005262 Bacteria 189081
37 Ga0070658_10150187 3300005327 Bacteria 1950
38 Ga0070658_10229165 3300005327 Bacteria 1573
39 Ga0070676_10000038 3300005328 Bacteria 39143
40 Ga0070666_10000052 3300005335 Bacteria 99095
41 Ga0070680_100286001 3300005336 Bacteria 1397
42 Ga0070680_100526498 3300005336 Bacteria 1012
43 Ga0068868_100051321 3300005338 Bacteria 3244
44 Ga0070660_101054309 3300005339 Bacteria 687
45 Ga0070671_100083648 3300005355 Bacteria 2668
46 Ga0070673_100700577 3300005364 Bacteria 930
47 Ga0070659_100248856 3300005366 Bacteria 1472
48 Ga0070667_100003555 3300005367 Bacteria 13278
49 Ga0070678_100001488 3300005456 Bacteria 12517
50 Ga0070662_100000464 3300005457 Bacteria 24077
51 Ga0070681_10032316 3300005458 Bacteria 5251
52 Ga0068867_100000255 3300005459 Bacteria 35036
53 Ga0068867_100124387 3300005459 Bacteria 1997
54 Ga0070679_100614307 3300005530 Bacteria 1030
55 Ga0068853_100023249 3300005539 Bacteria 5186
56 Ga0068853_100423864 3300005539 Bacteria 1248
57 Ga0070672_100108708 3300005543 Unclassified 2258
58 Ga0070665_100000003 3300005548 Bacteria 811857
59 Ga0068855_100000086 3300005563 Bacteria 111462
60 Ga0068855_100005249 3300005563 Bacteria 15806
61 Ga0068855_100035862 3300005563 Bacteria 5906
62 Ga0068855_100087490 3300005563 Bacteria 3601
63 Ga0068857_100224658 3300005577 Bacteria 1716
64 Ga0068856_100001137 3300005614 Bacteria 27953
65 Ga0068856_100018866 3300005614 Bacteria 6688
66 Ga0068856_100066617 3300005614 Bacteria 3558
67 Ga0068852_100001089 3300005616 Bacteria 17919
68 Ga0068852_100003824 3300005616 Bacteria 10574
69 Ga0068859_100000227 3300005617 Bacteria 55148
70 Ga0068864_100015397 3300005618 Bacteria 6359
71 Ga0068864_100524454 3300005618 Bacteria 1142
72 Ga0068866_10082142 3300005718 Bacteria 1733
73 Ga0068851_10047954 3300005834 Bacteria 2164
74 Ga0068870_10143044 3300005840 Bacteria 1401
75 Ga0068863_100018813 3300005841 Bacteria 6609
76 Ga0068858_100003299 3300005842 Bacteria 16064
77 Ga0068858_100231394 3300005842 Bacteria 1752
78 Ga0070716_100178368 3300006173 Bacteria 1392
79 Ga0075366_10000577 3300006195 Bacteria 17211
80 Ga0075366_10002035 3300006195 Bacteria 10260
81 Ga0075366_10022885 3300006195 Bacteria 3638
82 Ga0097621_100000241 3300006237 Bacteria 36577
83 Ga0068871_100000499 3300006358 Bacteria 26769
84 Ga0068865_100000022 3300006881 Bacteria 102976
85 Ga0097620_100000227 3300006931 Bacteria 55148
86 Ga0105240_10012660 3300009093 Bacteria 11631
87 Ga0105240_10018980 3300009093 Bacteria 9208
88 Ga0105240_10085206 3300009093 Bacteria 3872
89 Ga0105240_10093485 3300009093 Bacteria 3670
90 Ga0105240_10120097 3300009093 Bacteria 3166
91 Ga0105240_10128146 3300009093 Bacteria 3047
92 Ga0105240_10212849 3300009093 Bacteria 2257
93 Ga0105240_10294676 3300009093 Bacteria 1858
94 Ga0105240_11661385 3300009093 Bacteria 667
95 Ga0105245_10039886 3300009098 Bacteria 4181
96 Ga0105247_10006908 3300009101 Bacteria 6987
97 Ga0105243_10000006 3300009148 Bacteria 465541
98 Ga0105243_10040383 3300009148 Bacteria 3644
99 Ga0105243_11076873 3300009148 Unclassified 811
100 Ga0105241_10003853 3300009174 Bacteria 11119
101 Ga0105241_10005285 3300009174 Bacteria 9536
102 Ga0105241_10014101 3300009174 Bacteria 5856
103 Ga0105241_10091343 3300009174 Bacteria 2402
104 Ga0105242_10100788 3300009176 Bacteria 2446
105 Ga0105242_10550491 3300009176 Bacteria 1106
106 Ga0105237_10001288 3300009545 Bacteria 33371
107 Ga0105237_10001545 3300009545 Bacteria 30045
108 Ga0105237_10001855 3300009545 Bacteria 27072
109 Ga0105237_10026574 3300009545 Bacteria 5916
110 Ga0105237_10028382 3300009545 Bacteria 5701
111 Ga0105237_10040020 3300009545 Bacteria 4730
112 Ga0105237_10041643 3300009545 Bacteria 4632
113 Ga0105237_10073090 3300009545 Bacteria 3421
114 Ga0105238_10019950 3300009551 Bacteria 6824
115 Ga0105238_11086159 3300009551 Bacteria 822
116 Ga0105249_10001331 3300009553 Bacteria 21632
117 Ga0105239_10000005 3300010375 Bacteria 496066
118 Ga0105239_10000042 3300010375 Bacteria 199662
119 Ga0105239_10001594 3300010375 Bacteria 29975
120 Ga0105239_10006813 3300010375 Bacteria 13177
121 Ga0105239_10046424 3300010375 Bacteria 4760
122 Ga0105239_10124360 3300010375 Bacteria 2866
123 Ga0105239_10195883 3300010375 Unclassified 2263
124 Ga0105246_10005012 3300011119 Bacteria 8052
125 Ga0157373_10031210 3300013100 Bacteria 3835
126 Ga0157373_10116013 3300013100 Bacteria 1882
127 Ga0157371_10003944 3300013102 Bacteria 13179
128 Ga0157371_10019972 3300013102 Bacteria 4934
129 Ga0157371_10037577 3300013102 Bacteria 3464
130 Ga0157370_10116178 3300013104 Bacteria 2499
131 Ga0157370_10275730 3300013104 Bacteria 1554
132 Ga0157370_10333098 3300013104 Bacteria 1399
133 Ga0157369_10060955 3300013105 Unclassified 4068
134 Ga0157369_10378853 3300013105 Bacteria 1468
135 Ga0157374_10000130 3300013296 Bacteria 68718
136 Ga0157374_10001204 3300013296 Bacteria 22127
137 Ga0157374_10213849 3300013296 Bacteria 1891
138 Ga0157374_10275587 3300013296 Unclassified 1660
139 Ga0157374_10327405 3300013296 Bacteria 1519
140 Ga0157378_10011920 3300013297 Bacteria 7613
141 Ga0157378_10036379 3300013297 Bacteria 4357
142 Ga0157378_10124468 3300013297 Bacteria 2380
143 Ga0163162_10000064 3300013306 Bacteria 103542
144 Ga0163162_10005622 3300013306 Bacteria 12113
145 Ga0163162_10008988 3300013306 Bacteria 9717
146 Ga0163162_10632974 3300013306 Bacteria 1194
147 Ga0157372_10001064 3300013307 Bacteria 30014
148 Ga0157372_10006859 3300013307 Bacteria 12119
149 Ga0157372_10533154 3300013307 Bacteria 1368
150 Ga0157372_10630587 3300013307 Bacteria 1249
151 Ga0157375_10015709 3300013308 Bacteria 6783
152 Ga0157375_10464694 3300013308 Bacteria 1431
153 Ga0163163_10210196 3300014325 Bacteria 1995
154 Ga0182008_10000275 3300014497 Bacteria 40323
155 Ga0182008_10005048 3300014497 Bacteria 7582
156 Ga0157379_10056041 3300014968 Bacteria 3523
157 Ga0157376_10045152 3300014969 Bacteria 3626
158 Ga0182006_1000160 3300015261 Bacteria 71698
159 Ga0182007_10002140 3300015262 Bacteria 10073
160 Ga0182007_10003583 3300015262 Bacteria 7297
161 Ga0163161_10002011 3300017792 Bacteria 14710
162 Ga0163161_10013631 3300017792 Bacteria 5660
163 Ga0206351_10135888 3300020077 Bacteria 1960
164 Ga0213872_10017552 3300021361 Bacteria 3306
165 Ga0209563_103327 3300025230 Bacteria 3355
166 Ga0207427_100208 3300025231 Bacteria 53345
167 Ga0209437_100024 3300025233 Bacteria 592878
168 Ga0209437_100052 3300025233 Bacteria 380548
169 Ga0209258_100311 3300025242 Bacteria 76151
170 Ga0209026_1000305 3300025250 Bacteria 53618
171 Ga0209026_1004883 3300025250 Bacteria 3798
172 Ga0209148_1000163 3300025254 Bacteria 137449
173 Ga0209233_1000067 3300025261 Bacteria 380554
174 Ga0209673_1000034 3300025273 Bacteria 328788
175 Ga0209564_1002599 3300025295 Bacteria 13842
176 Ga0209564_1033801 3300025295 Bacteria 1513
177 Ga0209758_1005816 3300025297 Bacteria 9238
178 Ga0209758_1015876 3300025297 Bacteria 3867
179 Ga0209050_1000353 3300025298 Bacteria 88509
180 Ga0207426_1000558 3300025302 Bacteria 51284
181 Ga0209257_1000974 3300025304 Bacteria 39098
182 Ga0207680_10000035 3300025903 Bacteria 73889
183 Ga0207647_10000093 3300025904 Bacteria 68094
184 Ga0207645_10005282 3300025907 Bacteria 9404
185 Ga0207705_10000069 3300025909 Bacteria 133094
186 Ga0207705_10021655 3300025909 Bacteria 4586
187 Ga0207654_10002822 3300025911 Bacteria 8815
188 Ga0207654_10006927 3300025911 Bacteria 5708
189 Ga0207654_10009083 3300025911 Bacteria 5041
190 Ga0207707_10011067 3300025912 Bacteria 7846
191 Ga0207695_10001318 3300025913 Bacteria 42076
192 Ga0207695_10002972 3300025913 Bacteria 24457
193 Ga0207695_10025631 3300025913 Bacteria 6596
194 Ga0207695_10054334 3300025913 Bacteria 4183
195 Ga0207695_10142357 3300025913 Bacteria 2345
196 Ga0207695_10166846 3300025913 Bacteria 2129
197 Ga0207671_10000502 3300025914 Bacteria 53150
198 Ga0207671_10001714 3300025914 Bacteria 24751
199 Ga0207671_10003844 3300025914 Bacteria 14692
200 Ga0207671_10004886 3300025914 Bacteria 12600
201 Ga0207671_10009440 3300025914 Bacteria 8155
202 Ga0207671_10018244 3300025914 Bacteria 5389
203 Ga0207671_10091416 3300025914 Bacteria 2293
204 Ga0207671_10274768 3300025914 Bacteria 1328
205 Ga0207671_10494703 3300025914 Bacteria 975
206 Ga0207657_10012800 3300025919 Bacteria 8257
207 Ga0207652_10541220 3300025921 Bacteria 1047
208 Ga0207687_10266266 3300025927 Bacteria 1368
209 Ga0207644_10007945 3300025931 Bacteria 6938
210 Ga0207644_10191790 3300025931 Bacteria 1607
211 Ga0207690_10256184 3300025932 Bacteria 1354
212 Ga0207706_10000243 3300025933 Bacteria 59842
213 Ga0207709_10000007 3300025935 Bacteria 752025
214 Ga0207704_10000011 3300025938 Bacteria 180140
215 Ga0207691_10059744 3300025940 Bacteria 3466
216 Ga0207689_10001620 3300025942 Bacteria 21317
217 Ga0207667_10000229 3300025949 Bacteria 78821
218 Ga0207667_10009882 3300025949 Bacteria 11196
219 Ga0207667_10268123 3300025949 Bacteria 1745
220 Ga0207667_10402990 3300025949 Bacteria 1393
221 Ga0207651_10079630 3300025960 Bacteria 2354
222 Ga0207712_10132806 3300025961 Bacteria 1899
223 Ga0207668_11084458 3300025972 Unclassified 717
224 Ga0207658_10020705 3300025986 Bacteria 4556
225 Ga0207677_10199817 3300026023 Unclassified 1588
226 Ga0207703_10002779 3300026035 Bacteria 14978
227 Ga0207639_10091672 3300026041 Bacteria 2433
228 Ga0207639_10108730 3300026041 Bacteria 2255
229 Ga0207639_10212579 3300026041 Bacteria 1666
230 Ga0207639_10275809 3300026041 Bacteria 1477
231 Ga0207639_11198989 3300026041 Bacteria 712
232 Ga0207702_10004829 3300026078 Bacteria 11875
233 Ga0207641_10000454 3300026088 Bacteria 46782
234 Ga0207648_10001014 3300026089 Bacteria 31612
235 Ga0207676_10023949 3300026095 Bacteria 4512
236 Ga0207674_10406455 3300026116 Bacteria 1316
237 Ga0207683_10008234 3300026121 Bacteria 8919
238 Ga0207698_10001995 3300026142 Bacteria 12019
239 Ga0207698_10008397 3300026142 Bacteria 6530
240 Ga0268266_10000078 3300028379 Bacteria 213632
241 Ga0268264_10001805 3300028381 Bacteria 19566
242 Ga0307517_10026740 3300028786 Bacteria 6970
243 Ga0265338_10325617 3300028800 Bacteria 1111
244 Ga0265338_10359086 3300028800 Unclassified 1046
245 Ga0316177_1077878 3300030731 Bacteria 6190
246 Ga0316176_1021983 3300030732 Bacteria 15027
247 Ga0314311_1105581 3300030733 Bacteria 1865
248 Ga0316183_1083168 3300030742 Bacteria 31711
249 Ga0316181_1101548 3300030744 Bacteria 29976
250 Ga0265327_10050604 3300031251 Bacteria 2173
251 Ga0307414_10038714 3300032004 Bacteria 3205
252 Ga0307414_10074842 3300032004 Unclassified 2455
253 Ga0307510_10001439 3300033180 Bacteria 26186
254 Ga0307510_10277327 3300033180 Bacteria 1149
255 Ga0395899_0001870 3300037312 Bacteria 17378
256 Ga0395900_0000014 3300037418 Bacteria 386513
257 Ga0395900_0000358 3300037418 Bacteria 66350
258 Ga0395898_0002626 3300037466 Bacteria 20893
259 Ga0395898_0155021 3300037466 Bacteria 2191
260 Ga0395905_0000037 3300037471 Bacteria 261808
261 Ga0395905_0003177 3300037471 Bacteria 17687
262 Ga0395901_0000117 3300038443 Bacteria 105071
263 Ga0395901_0024869 3300038443 Bacteria 6147
264 Ga0436361_0530498 3300039447 Bacteria 9055
265 Ga0439448_0039191 3300042005 Bacteria 1527
266 Ga0439455_0054254 3300042012 Bacteria 1052
267 Ga0466965_0098705 3300044683 Bacteria 1492
268 Ga0495638_0196161 3300046460 Bacteria 1143
269 Ga0495650_0000087 3300046471 Bacteria 234870
270 Ga0495585_0000448 3300046492 Bacteria 39402
271 Ga0495585_0283016 3300046492 Bacteria 819
272 Ga0495583_0117672 3300046506 Bacteria 1121
273 Ga0495606_0000052 3300046507 Bacteria 201529
274 Ga0495606_0025337 3300046507 Bacteria 4250
275 Ga0495610_0002055 3300046512 Bacteria 17197
276 Ga0495616_0006186 3300046513 Bacteria 7281
277 Ga0495616_0009584 3300046513 Bacteria 5652
278 Ga0495618_0212663 3300046514 Bacteria 1222
279 Ga0495631_0084718 3300046518 Bacteria 1366
280 Ga0495609_0072982 3300046538 Bacteria 1506
281 Ga0495622_0252762 3300046557 Bacteria 775
282 Ga0495633_0003630 3300046558 Bacteria 10200
283 Ga0495668_0182640 3300046616 Bacteria 1149
284 Ga0495625_0000008 3300046660 Bacteria 536165
285 Ga0495625_0000791 3300046660 Bacteria 43870
286 Ga0495625_0034327 3300046660 Bacteria 3745
287 Ga0495625_0042410 3300046660 Bacteria 3307
288 Ga0495625_0134042 3300046660 Bacteria 1676
289 Ga0495625_0162002 3300046660 Bacteria 1498
290 Ga0495661_0008385 3300046665 Bacteria 7150
291 Ga0495669_0059807 3300046684 Bacteria 1722
292 Ga0495671_0218073 3300046692 Bacteria 924
293 Ga0495649_0000018 3300046694 Bacteria 220586
294 Ga0495649_0033488 3300046694 Bacteria 2828
295 Ga0495660_0011188 3300046810 Bacteria 5209
296 Ga0495687_001584 3300047443 Bacteria 20599
297 Ga0495687_001870 3300047443 Bacteria 18236
298 Ga0495673_0019254 3300047469 Bacteria 3422
299 Ga0495686_0000052 3300047472 Bacteria 262622
300 Ga0495686_0006150 3300047472 Bacteria 9282
301 Ga0495686_0061394 3300047472 Bacteria 2334
302 Ga0495686_0078419 3300047472 Bacteria 2021
303 Ga0496116_0001311 3300048919 Bacteria 28354
304 Ga0496117_0012996 3300048920 Bacteria 7293
305 Ga0496118_0051971 3300048921 Bacteria 3131
306 Ga0496122_0025662 3300048925 Bacteria 5109
307 Ga0496123_0005598 3300048926 Bacteria 12559
308 Ga0496123_0029446 3300048926 Bacteria 4042
309 Ga0496124_0027917 3300048927 Bacteria 5055
310 Ga0496125_0057641 3300048928 Bacteria 3144
311 Ga0496125_0162439 3300048928 Bacteria 1515
312 Ga0495678_015437 3300049459 Bacteria 3514
313 Ga0501238_027571 3300049671 Bacteria 816
314 nmdc:mga0k408_242225_c1 3300050493 Bacteria 1077
315 nmdc:mga0k408_256_c2 3300050493 Bacteria 19110
316 nmdc:mga0k408_7035_c1 3300050493 Bacteria 6005
317 nmdc:mga0k408_884_c1 3300050493 Bacteria 16424
318 nmdc:mga0sz30_156386_c1 3300050516 Bacteria 1009
319 Ga0500644_0000344 3300053088 Bacteria 23446
320 Ga0500608_030663 3300053122 Bacteria 2549
321 Ga0500618_000124 3300053125 Bacteria 63455
322 Ga0500618_036495 3300053125 Bacteria 1139
323 Ga0500658_0005956 3300053134 Bacteria 4534
324 Ga0500561_0075072 3300053137 Bacteria 975
325 Ga0500577_0001852 3300053142 Bacteria 5417
326 Ga0500590_103212 3300053148 Bacteria 1366
327 Ga0500616_0010292 3300053153 Bacteria 5605
328 Ga0500624_000486 3300053157 Bacteria 11714
329 Ga0500633_0000305 3300053160 Bacteria 7239
330 Ga0500636_0014528 3300053177 Bacteria 4632
331 2599478213 2599185184 Bacteria 6430550
332 2722730320 2721755487 Bacteria 6357185
333 2842906879 2842903701 Bacteria 6986368
334 2852623359 2852623160 Bacteria 4376875
335 2884937764 2884933994 Bacteria 4535041
336 2887380017 2887375801 Bacteria 5334027
337 2890740500 2890737413 Bacteria 4269751
338 2896319529 2896317667 Bacteria 4606601
339 2896345367 2896344016 Bacteria 3811746
340 2898714806 2898713307 Bacteria 4110805
341 2904783948 2904780799 Bacteria 5840761
342 2914760032 2914759650 Bacteria 4701441
343 2919181886 2919177583 Bacteria 5641607
344 2919187446 2919186247 Bacteria 6244071
345 2919438915 2919437846 Bacteria 6199444
346 2928080736 2928078545 Bacteria 6534839
347 2928150961 2928147474 Bacteria 6512076
348 2929158005 2929154850 Bacteria 6753285
349 2932082881 2932082852 Bacteria 6563563
350 2939665287 2939664404 Bacteria 6364494
351 3003235868 3003233435 Bacteria 4458031
352 Ga0065704_10073205
353 JGI24736J21556_1002894
354 JGI24740J21852_10026052
355 JGI24740J21852_10029325
356 JGI24739J22299_10000110
357 JGI24739J22299_10019935
358 JGI24737J22298_10000110
359 JGI24735J21928_10000004
360 JGI24744J21845_10006353
361 JGI25162J39368_1000017
362 JGI25162J39368_1000342
363 JGI25157J39369_1007407
364 JGI25164J39214_1001206
365 JGI25165J46597_1001336
366 JGI25153J46596_10043166
367 rootH1_10018005
368 rootH2_10001334
369 rootH2_10016716
370 rootH2_10016717
371 rootH2_10220308
372 rootL2_10113060
373 rootL2_10113067
374 rootH1_10069372
375 rootH1_10210781
376 JGI25160J50197_1002302
377 Ga0055526_1021090
378 Ga0055526_1034007
379 Ga0055526_1034799
380 Ga0055528_1002314
381 Ga0055530_10000813
382 Ga0055543_1019215
383 Ga0058863_11655734
384 Ga0058861_10362865
385 Ga0058862_11855584
386 Ga0058862_11871750
387 Ga0065165_1000053
388 Ga0070658_10150187
389 Ga0070658_10229165
390 Ga0070676_10000038
391 Ga0070666_10000052
392 Ga0070680_100286001
393 Ga0070680_100526498
394 Ga0068868_100051321
395 Ga0070660_101054309
396 Ga0070671_100083648
397 Ga0070673_100700577
398 Ga0070659_100248856
399 Ga0070667_100003555
400 Ga0070678_100001488
401 Ga0070662_100000464
402 Ga0070681_10032316
403 Ga0068867_100000255
404 Ga0068867_100124387
405 Ga0070679_100614307
406 Ga0068853_100023249
407 Ga0068853_100423864
408 Ga0070672_100108708
409 Ga0070665_100000003
410 Ga0068855_100000086
411 Ga0068855_100005249
412 Ga0068855_100035862
413 Ga0068855_100087490
414 Ga0068857_100224658
415 Ga0068856_100001137
416 Ga0068856_100018866
417 Ga0068856_100066617
418 Ga0068852_100001089
419 Ga0068852_100003824
420 Ga0068859_100000227
421 Ga0068864_100015397
422 Ga0068864_100524454
423 Ga0068866_10082142
424 Ga0068851_10047954
425 Ga0068870_10143044
426 Ga0068863_100018813
427 Ga0068858_100003299
428 Ga0068858_100231394
429 Ga0070716_100178368
430 Ga0075366_10000577
431 Ga0075366_10002035
432 Ga0075366_10022885
433 Ga0097621_100000241
434 Ga0068871_100000499
435 Ga0068865_100000022
436 Ga0097620_100000227
437 Ga0105240_10012660
438 Ga0105240_10018980
439 Ga0105240_10085206
440 Ga0105240_10093485
441 Ga0105240_10120097
442 Ga0105240_10128146
443 Ga0105240_10212849
444 Ga0105240_10294676
445 Ga0105240_11661385
446 Ga0105245_10039886
447 Ga0105247_10006908
448 Ga0105243_10000006
449 Ga0105243_10040383
450 Ga0105243_11076873
451 Ga0105241_10003853
452 Ga0105241_10005285
453 Ga0105241_10014101
454 Ga0105241_10091343
455 Ga0105242_10100788
456 Ga0105242_10550491
457 Ga0105237_10001288
458 Ga0105237_10001545
459 Ga0105237_10001855
460 Ga0105237_10026574
461 Ga0105237_10028382
462 Ga0105237_10040020
463 Ga0105237_10041643
464 Ga0105237_10073090
465 Ga0105238_10019950
466 Ga0105238_11086159
467 Ga0105249_10001331
468 Ga0105239_10000005
469 Ga0105239_10000042
470 Ga0105239_10001594
471 Ga0105239_10006813
472 Ga0105239_10046424
473 Ga0105239_10124360
474 Ga0105239_10195883
475 Ga0105246_10005012
476 Ga0157373_10031210
477 Ga0157373_10116013
478 Ga0157371_10003944
479 Ga0157371_10019972
480 Ga0157371_10037577
481 Ga0157370_10116178
482 Ga0157370_10275730
483 Ga0157370_10333098
484 Ga0157369_10060955
485 Ga0157369_10378853
486 Ga0157374_10000130
487 Ga0157374_10001204
488 Ga0157374_10213849
489 Ga0157374_10275587
490 Ga0157374_10327405
491 Ga0157378_10011920
492 Ga0157378_10036379
493 Ga0157378_10124468
494 Ga0163162_10000064
495 Ga0163162_10005622
496 Ga0163162_10008988
497 Ga0163162_10632974
498 Ga0157372_10001064
499 Ga0157372_10006859
500 Ga0157372_10533154
501 Ga0157372_10630587
502 Ga0157375_10015709
503 Ga0157375_10464694
504 Ga0163163_10210196
505 Ga0182008_10000275
506 Ga0182008_10005048
507 Ga0157379_10056041
508 Ga0157376_10045152
509 Ga0182006_1000160
510 Ga0182007_10002140
511 Ga0182007_10003583
512 Ga0163161_10002011
513 Ga0163161_10013631
514 Ga0206351_10135888
515 Ga0213872_10017552
516 Ga0209563_103327
517 Ga0207427_100208
518 Ga0209437_100024
519 Ga0209437_100052
520 Ga0209258_100311
521 Ga0209026_1000305
522 Ga0209026_1004883
523 Ga0209148_1000163
524 Ga0209233_1000067
525 Ga0209673_1000034
526 Ga0209564_1002599
527 Ga0209564_1033801
528 Ga0209758_1005816
529 Ga0209758_1015876
530 Ga0209050_1000353
531 Ga0207426_1000558
532 Ga0209257_1000974
533 Ga0207680_10000035
534 Ga0207647_10000093
535 Ga0207645_10005282
536 Ga0207705_10000069
537 Ga0207705_10021655
538 Ga0207654_10002822
539 Ga0207654_10006927
540 Ga0207654_10009083
541 Ga0207707_10011067
542 Ga0207695_10001318
543 Ga0207695_10002972
544 Ga0207695_10025631
545 Ga0207695_10054334
546 Ga0207695_10142357
547 Ga0207695_10166846
548 Ga0207671_10000502
549 Ga0207671_10001714
550 Ga0207671_10003844
551 Ga0207671_10004886
552 Ga0207671_10009440
553 Ga0207671_10018244
554 Ga0207671_10091416
555 Ga0207671_10274768
556 Ga0207671_10494703
557 Ga0207657_10012800
558 Ga0207652_10541220
559 Ga0207687_10266266
560 Ga0207644_10007945
561 Ga0207644_10191790
562 Ga0207690_10256184
563 Ga0207706_10000243
564 Ga0207709_10000007
565 Ga0207704_10000011
566 Ga0207691_10059744
567 Ga0207689_10001620
568 Ga0207667_10000229
569 Ga0207667_10009882
570 Ga0207667_10268123
571 Ga0207667_10402990
572 Ga0207651_10079630
573 Ga0207712_10132806
574 Ga0207668_11084458
575 Ga0207658_10020705
576 Ga0207677_10199817
577 Ga0207703_10002779
578 Ga0207639_10091672
579 Ga0207639_10108730
580 Ga0207639_10212579
581 Ga0207639_10275809
582 Ga0207639_11198989
583 Ga0207702_10004829
584 Ga0207641_10000454
585 Ga0207648_10001014
586 Ga0207676_10023949
587 Ga0207674_10406455
588 Ga0207683_10008234
589 Ga0207698_10001995
590 Ga0207698_10008397
591 Ga0268266_10000078
592 Ga0268264_10001805
593 Ga0307517_10026740
594 Ga0265338_10325617
595 Ga0265338_10359086
596 Ga0316177_1077878
597 Ga0316176_1021983
598 Ga0314311_1105581
599 Ga0316183_1083168
600 Ga0316181_1101548
601 Ga0265327_10050604
602 Ga0307414_10038714
603 Ga0307414_10074842
604 Ga0307510_10001439
605 Ga0307510_10277327
606 Ga0395899_0001870
607 Ga0395900_0000014
608 Ga0395900_0000358
609 Ga0395898_0002626
610 Ga0395898_0155021
611 Ga0395905_0000037
612 Ga0395905_0003177
613 Ga0395901_0000117
614 Ga0395901_0024869
615 Ga0436361_0530498
616 Ga0439448_0039191
617 Ga0439455_0054254
618 Ga0466965_0098705
619 Ga0495638_0196161
620 Ga0495650_0000087
621 Ga0495585_0000448
622 Ga0495585_0283016
623 Ga0495583_0117672
624 Ga0495606_0000052
625 Ga0495606_0025337
626 Ga0495610_0002055
627 Ga0495616_0006186
628 Ga0495616_0009584
629 Ga0495618_0212663
630 Ga0495631_0084718
631 Ga0495609_0072982
632 Ga0495622_0252762
633 Ga0495633_0003630
634 Ga0495668_0182640
635 Ga0495625_0000008
636 Ga0495625_0000791
637 Ga0495625_0034327
638 Ga0495625_0042410
639 Ga0495625_0134042
640 Ga0495625_0162002
641 Ga0495661_0008385
642 Ga0495669_0059807
643 Ga0495671_0218073
644 Ga0495649_0000018
645 Ga0495649_0033488
646 Ga0495660_0011188
647 Ga0495687_001584
648 Ga0495687_001870
649 Ga0495673_0019254
650 Ga0495686_0000052
651 Ga0495686_0006150
652 Ga0495686_0061394
653 Ga0495686_0078419
654 Ga0496116_0001311
655 Ga0496117_0012996
656 Ga0496118_0051971
657 Ga0496122_0025662
658 Ga0496123_0005598
659 Ga0496123_0029446
660 Ga0496124_0027917
661 Ga0496125_0057641
662 Ga0496125_0162439
663 Ga0495678_015437
664 Ga0501238_027571
665 nmdc:mga0k408_242225_c1
666 nmdc:mga0k408_256_c2
667 nmdc:mga0k408_7035_c1
668 nmdc:mga0k408_884_c1
669 nmdc:mga0sz30_156386_c1
670 Ga0500644_0000344
671 Ga0500608_030663
672 Ga0500618_000124
673 Ga0500618_036495
674 Ga0500658_0005956
675 Ga0500561_0075072
676 Ga0500577_0001852
677 Ga0500590_103212
678 Ga0500616_0010292
679 Ga0500624_000486
680 Ga0500633_0000305
681 Ga0500636_0014528
682 2599478213
683 2722730320
684 2842906879
685 2852623359
686 2884937764
687 2887380017
688 2890740500
689 2896319529
690 2896345367
691 2898714806
692 2904783948
693 2914760032
694 2919181886
695 2919187446
696 2919438915
697 2928080736
698 2928150961
699 2929158005
700 2932082881
701 2939665287
702 3003235868

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04116

FA_hydroxylase

Fatty acid hydroxylase

63

203

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zr0-assembly1.cif.gz_A full length scs7p (only hydroxylase domain visible) 0.8451 19 206
4zr0-assembly1.cif.gz_A full length scs7p (only hydroxylase domain visible) 0.763 19 206
8pd9-assembly1.cif.gz_A camp-bound spslc9c1 in lipid nanodiscs, protomer state 1 0.3755 17 199
8pd3-assembly1.cif.gz_A ligand-free spslc9c1 in lipid nanodiscs, protomer state 2 0.3505 24 199
8pd9-assembly1.cif.gz_A camp-bound spslc9c1 in lipid nanodiscs, protomer state 1 0.3145 17 199
ID Description Score Start End Superfamily
af_C0HHN4_355_518_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4283 13 202 1.20.1250.20
af_C0HHN4_355_518_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4234 13 202 1.20.1250.20
af_P02921_8_203_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3964 21 203 1.20.1250.20
af_Q8BGC3_251_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3878 20 203 1.20.1250.20
af_Q54E68_44_188_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3806 29 206 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4V4H2M0-F1-model_v4 Fatty acid hydroxylase domain-containing protein 0.9086 16 174 GO:0005789
GO:0006631
GO:0080132
AF-A0A453LYL1-F1-model_v4 Aldehyde oxygenase (deformylating) 0.9076 37 174 GO:0005789
GO:0006631
GO:0080132
AF-A0A7S1STF9-F1-model_v4 Fatty acid hydroxylase domain-containing protein 0.9006 37 154 GO:0005789
GO:0006631
GO:0080132
AF-A0A7Y3ARA3-F1-model_v4 Fatty acid hydroxylase 0.8976 13 150 GO:0006631
GO:0016020
GO:0080132
AF-K3Z8H2-F1-model_v4 Aldehyde oxygenase (deformylating) 0.897 16 175 GO:0005789
GO:0006629
GO:0080132

Map