F418558

General Info

Members Datasets Scaffolds Average Seq Length
351 185 702 626

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100000001|Ga0068855_100000001135
Length 689
Sequence MQGIWLRGVYSVIIIDMTAQQIRSLYLDFYKKRGHKVIPRALLVPQNDPSTLFTGSGMQPMIPYLLGEEHPDGVRLVDSQTCLRAQDISDVGDNRHTTFFEMIGNWSLGDYFKNEQIAWMFEFLTEVVRLDAAKLYVTCFIGAPEYNVPKDTEAAELWKKLFAKKGIEADVADIGSEEDGYKRGVKPGERIFYYDGSKNWWSRNGGPQTTPIGDPCGPDSEMFYDFDDLTIHPAWVDTLVSLRKSDESEEEIRENYKYCHPNCDCGRFMEVGNNVFMAYRKVAEGKFELLEKPNIDHGSGLERIAAAAINDPDVFKISLLWPIVQKLESISGKKYDSNTQSMRVIADHIRAAVFLAVDGVVPSNKEQGYVMRRLVRRAIRFAFDLGVEQNFLEQIVPVVADLYHEDMPDVAENRDRVIEVLVKEEKVFRQTLRKGLNEFVSWSRPFTIGQSIIGGPDTIGESVPSNIPILRGDILFKLYDTYGFPVELTKEEAFKRGIALSPDADVEFGRLMQEQRQRSQTAAKGVFKGGLGGQTMQHKKYHTATHLMYQALRQTLGDHVIQHGSNITEERLRFDFSHPEKVTSEQLKQVEDIVNEQIDKDLKVSYAEYPTDVARGELGALGAFGDRYGDTVKVYKMIADGAEKPFSFEICGGPHVDHTGQLAEDGKRFKIIKEEASSAGIRRIKAVLA

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
45 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
46 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
47 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
60 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
61 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
62 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
63 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
64 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
65 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
66 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
67 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
107 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
108 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
109 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
110 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
111 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
112 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
113 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
114 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
115 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
116 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
117 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
118 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
119 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
120 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
121 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
122 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
123 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
124 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
125 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
126 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
131 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
144 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
145 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
148 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
151 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
152 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
153 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
162 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
163 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
167 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
168 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
169 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
170 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
171 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
172 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
173 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
174 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
175 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
176 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
177 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
178 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
179 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
180 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
181 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
182 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
183 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
184 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
185 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.92
Nodule 0
Rhizoplane 0
Rhizosphere 70.66
Stem 0
Stem Tuber 0
Unclassified 1.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100000001 3300005563 Bacteria 818777
2 JGI24741J21665_1000243 3300001915 Bacteria 16188
3 JGI24740J21852_10001643 3300001979 Bacteria 10275
4 JGI24740J21852_10010102 3300001979 Bacteria 3653
5 JGI24737J22298_10000030 3300001990 Bacteria 42783
6 JGI24737J22298_10000232 3300001990 Bacteria 18410
7 JGI24735J21928_10000064 3300002067 Bacteria 43570
8 JGI24735J21928_10000102 3300002067 Bacteria 31648
9 JGI24738J21930_10000555 3300002075 Bacteria 10675
10 JGI24742J22300_10000092 3300002244 Bacteria 13209
11 rootH2_10000244 3300003320 Bacteria 697651
12 rootL2_10158957 3300003322 Bacteria 8100
13 rootH1_10052692 3300003323 Bacteria 2600
14 rootH1_10137221 3300003323 Bacteria 11034
15 Ga0065715_10089076 3300005293 Bacteria 14898
16 Ga0070658_10000015 3300005327 Bacteria 230579
17 Ga0070658_10000020 3300005327 Bacteria 188851
18 Ga0070658_10000024 3300005327 Bacteria 175873
19 Ga0070658_10000403 3300005327 Bacteria 37465
20 Ga0070676_10002540 3300005328 Bacteria 9377
21 Ga0070683_100095170 3300005329 Bacteria 2800
22 Ga0070666_10053245 3300005335 Bacteria 2729
23 Ga0070680_100008972 3300005336 Bacteria 7667
24 Ga0070682_100001227 3300005337 Bacteria 14605
25 Ga0070682_100043659 3300005337 Bacteria 2773
26 Ga0070660_100000121 3300005339 Bacteria 49401
27 Ga0070660_100001371 3300005339 Bacteria 16539
28 Ga0070660_100037448 3300005339 Bacteria 3677
29 Ga0070661_100006110 3300005344 Bacteria 8293
30 Ga0070661_100015998 3300005344 Bacteria 5295
31 Ga0070671_100000001 3300005355 Bacteria 1228151
32 Ga0070671_100009373 3300005355 Bacteria 7863
33 Ga0070674_100016820 3300005356 Bacteria 4589
34 Ga0070674_100018540 3300005356 Bacteria 4402
35 Ga0070673_100000033 3300005364 Bacteria 60744
36 Ga0070659_100004161 3300005366 Bacteria 10316
37 Ga0070659_100005304 3300005366 Bacteria 9246
38 Ga0070659_100014773 3300005366 Bacteria 5840
39 Ga0070667_100000001 3300005367 Bacteria 1108638
40 Ga0070667_100007183 3300005367 Bacteria 9255
41 Ga0070713_100025428 3300005436 Bacteria 4629
42 Ga0070681_10000608 3300005458 Bacteria 29517
43 Ga0070685_10000864 3300005466 Bacteria 16457
44 Ga0070685_10000870 3300005466 Bacteria 16346
45 Ga0070706_100000179 3300005467 Bacteria 80520
46 Ga0070679_100000459 3300005530 Bacteria 34603
47 Ga0068853_100077540 3300005539 Bacteria 2903
48 Ga0070672_100007741 3300005543 Bacteria 7320
49 Ga0068855_100000005 3300005563 Bacteria 337711
50 Ga0068855_100000136 3300005563 Bacteria 93608
51 Ga0070664_100000517 3300005564 Bacteria 29256
52 Ga0070664_100011907 3300005564 Bacteria 7060
53 Ga0068857_100000002 3300005577 Bacteria 241401
54 Ga0068857_100055233 3300005577 Unclassified 3525
55 Ga0068854_100023589 3300005578 Bacteria 4205
56 Ga0068856_100000027 3300005614 Bacteria 133290
57 Ga0068856_100000029 3300005614 Bacteria 130205
58 Ga0068856_100000037 3300005614 Bacteria 120033
59 Ga0068856_100054301 3300005614 Bacteria 3951
60 Ga0068852_100000108 3300005616 Bacteria 55450
61 Ga0068852_100013748 3300005616 Bacteria 6204
62 Ga0068858_100009086 3300005842 Bacteria 9506
63 Ga0068860_100026426 3300005843 Bacteria 5596
64 Ga0081455_10000008 3300005937 Bacteria 256558
65 Ga0081539_10003847 3300005985 Bacteria 17603
66 Ga0075365_10000008 3300006038 Bacteria 114620
67 Ga0075365_10000010 3300006038 Bacteria 111824
68 Ga0075365_10000137 3300006038 Bacteria 22743
69 Ga0075365_10000293 3300006038 Bacteria 17345
70 Ga0075365_10031331 3300006038 Bacteria 3411
71 Ga0075368_10000643 3300006042 Bacteria 10620
72 Ga0075363_100000063 3300006048 Bacteria 21867
73 Ga0075364_10000100 3300006051 Bacteria 35471
74 Ga0075364_10000236 3300006051 Bacteria 26316
75 Ga0075364_10004729 3300006051 Bacteria 7862
76 Ga0075364_10012379 3300006051 Bacteria 5216
77 Ga0075364_10012755 3300006051 Bacteria 5154
78 Ga0075364_10028217 3300006051 Bacteria 3592
79 Ga0075364_10031505 3300006051 Bacteria 3407
80 Ga0075362_10000153 3300006177 Bacteria 18652
81 Ga0075367_10000072 3300006178 Bacteria 25736
82 Ga0075367_10005271 3300006178 Bacteria 6394
83 Ga0075369_10000001 3300006186 Bacteria 299616
84 Ga0075369_10000433 3300006186 Bacteria 12720
85 Ga0075366_10000059 3300006195 Bacteria 40344
86 Ga0075366_10000067 3300006195 Bacteria 39443
87 Ga0075366_10000069 3300006195 Bacteria 39389
88 Ga0075366_10000132 3300006195 Bacteria 31135
89 Ga0075366_10000728 3300006195 Bacteria 15646
90 Ga0075366_10012124 3300006195 Bacteria 4883
91 Ga0097621_100000001 3300006237 Bacteria 632268
92 Ga0097621_100015881 3300006237 Bacteria 5678
93 Ga0075370_10000628 3300006353 Bacteria 13663
94 Ga0068871_100000002 3300006358 Bacteria 152322
95 Ga0068865_100000726 3300006881 Bacteria 18552
96 Ga0105240_10000003 3300009093 Bacteria 1183681
97 Ga0105240_10000050 3300009093 Bacteria 236144
98 Ga0105240_10105661 3300009093 Bacteria 3418
99 Ga0105245_10000001 3300009098 Bacteria 939270
100 Ga0105245_10000200 3300009098 Bacteria 57196
101 Ga0105245_10003448 3300009098 Bacteria 14171
102 Ga0105243_10000001 3300009148 Bacteria 1156578
103 Ga0105243_10005590 3300009148 Bacteria 9792
104 Ga0105242_10000001 3300009176 Bacteria 574039
105 Ga0105242_10003164 3300009176 Bacteria 12858
106 Ga0105242_10135433 3300009176 Bacteria 2131
107 Ga0105237_10017172 3300009545 Bacteria 7506
108 Ga0105238_10000721 3300009551 Bacteria 34481
109 Ga0105238_10017531 3300009551 Bacteria 7281
110 Ga0105238_10055121 3300009551 Bacteria 3991
111 Ga0105032_100015 3300009979 Bacteria 54103
112 Ga0105028_100017 3300009993 Bacteria 21566
113 Ga0105028_100064 3300009993 Bacteria 10770
114 Ga0105239_10000301 3300010375 Bacteria 73122
115 Ga0105246_10000105 3300011119 Bacteria 36849
116 Ga0105246_10002817 3300011119 Bacteria 10535
117 Ga0105246_10019030 3300011119 Bacteria 4380
118 Ga0157373_10002357 3300013100 Bacteria 14342
119 Ga0157373_10006748 3300013100 Bacteria 8548
120 Ga0157373_10026065 3300013100 Bacteria 4225
121 Ga0157371_10000105 3300013102 Bacteria 126728
122 Ga0157371_10001903 3300013102 Bacteria 20870
123 Ga0157371_10004076 3300013102 Bacteria 12915
124 Ga0157371_10054802 3300013102 Bacteria 2831
125 Ga0157370_10000520 3300013104 Bacteria 48163
126 Ga0157369_10000003 3300013105 Bacteria 507337
127 Ga0157369_10000075 3300013105 Bacteria 136520
128 Ga0157369_10000832 3300013105 Bacteria 39454
129 Ga0157369_10001459 3300013105 Bacteria 28989
130 Ga0157369_10016781 3300013105 Bacteria 8230
131 Ga0157369_10031671 3300013105 Bacteria 5820
132 Ga0157374_10000096 3300013296 Bacteria 82179
133 Ga0157372_10000090 3300013307 Bacteria 93559
134 Ga0157372_10050033 3300013307 Bacteria 4649
135 Ga0163163_10001538 3300014325 Bacteria 19429
136 Ga0157377_10009382 3300014745 Bacteria 4799
137 Ga0157376_10000001 3300014969 Bacteria 842910
138 Ga0157376_10000083 3300014969 Bacteria 71608
139 Ga0207680_10039610 3300025903 Bacteria 2736
140 Ga0207647_10000338 3300025904 Bacteria 38215
141 Ga0207647_10001068 3300025904 Bacteria 21102
142 Ga0207645_10005423 3300025907 Bacteria 9247
143 Ga0207705_10000011 3300025909 Bacteria 517768
144 Ga0207705_10000047 3300025909 Bacteria 175887
145 Ga0207705_10000115 3300025909 Bacteria 89955
146 Ga0207705_10000202 3300025909 Bacteria 60086
147 Ga0207705_10005521 3300025909 Bacteria 9456
148 Ga0207684_10000250 3300025910 Bacteria 80526
149 Ga0207654_10016857 3300025911 Bacteria 3811
150 Ga0207707_10095591 3300025912 Bacteria 2597
151 Ga0207695_10000005 3300025913 Bacteria 1196715
152 Ga0207695_10006558 3300025913 Bacteria 15068
153 Ga0207695_10107318 3300025913 Bacteria 2777
154 Ga0207671_10005485 3300025914 Bacteria 11667
155 Ga0207660_10010199 3300025917 Bacteria 6090
156 Ga0207657_10000125 3300025919 Bacteria 76937
157 Ga0207657_10003549 3300025919 Bacteria 16661
158 Ga0207657_10007688 3300025919 Bacteria 11016
159 Ga0207649_10009573 3300025920 Bacteria 5306
160 Ga0207652_10007743 3300025921 Bacteria 8627
161 Ga0207652_10023350 3300025921 Bacteria 5123
162 Ga0207694_10007085 3300025924 Bacteria 8516
163 Ga0207687_10000001 3300025927 Bacteria 1130810
164 Ga0207687_10000004 3300025927 Bacteria 841177
165 Ga0207687_10004516 3300025927 Bacteria 9259
166 Ga0207687_10038343 3300025927 Bacteria 3274
167 Ga0207644_10000001 3300025931 Bacteria 1243214
168 Ga0207644_10007503 3300025931 Bacteria 7112
169 Ga0207690_10000679 3300025932 Bacteria 21792
170 Ga0207690_10006074 3300025932 Bacteria 7154
171 Ga0207706_10000090 3300025933 Bacteria 93774
172 Ga0207686_10000001 3300025934 Bacteria 1169580
173 Ga0207686_10006199 3300025934 Bacteria 6429
174 Ga0207709_10000002 3300025935 Bacteria 1171536
175 Ga0207691_10040250 3300025940 Bacteria 4320
176 Ga0207661_10067531 3300025944 Bacteria 2908
177 Ga0207679_10000186 3300025945 Bacteria 50492
178 Ga0207667_10000003 3300025949 Bacteria 822935
179 Ga0207667_10000060 3300025949 Bacteria 192320
180 Ga0207667_10000196 3300025949 Bacteria 88101
181 Ga0207651_10000255 3300025960 Bacteria 22940
182 Ga0207658_10000003 3300025986 Bacteria 1151934
183 Ga0207658_10005100 3300025986 Bacteria 9039
184 Ga0207703_10013321 3300026035 Bacteria 6407
185 Ga0207639_10058436 3300026041 Bacteria 2966
186 Ga0207702_10000001 3300026078 Bacteria 895738
187 Ga0207702_10002541 3300026078 Bacteria 17175
188 Ga0207674_10000001 3300026116 Bacteria 616581
189 Ga0207674_10001624 3300026116 Bacteria 28924
190 Ga0207674_10034552 3300026116 Bacteria 5282
191 Ga0207674_10086407 3300026116 Bacteria 3131
192 Ga0207683_10040332 3300026121 Bacteria 4073
193 Ga0207698_10002144 3300026142 Bacteria 11653
194 Ga0207698_10014210 3300026142 Bacteria 5284
195 Ga0209813_10000001 3300027866 Bacteria 280406
196 Ga0209813_10001456 3300027866 Bacteria 5335
197 Ga0268264_10022424 3300028381 Bacteria 5157
198 Ga0265337_1001633 3300028556 Bacteria 10907
199 Ga0265337_1010443 3300028556 Unclassified 3252
200 Ga0265326_10000495 3300028558 Bacteria 15206
201 Ga0265319_1006559 3300028563 Bacteria 5374
202 Ga0265334_10006606 3300028573 Bacteria 4989
203 Ga0265318_10009247 3300028577 Bacteria 4345
204 Ga0265323_10008925 3300028653 Bacteria 4118
205 Ga0265322_10000981 3300028654 Bacteria 9915
206 Ga0265338_10000313 3300028800 Bacteria 87846
207 Ga0265338_10001475 3300028800 Bacteria 38085
208 Ga0265338_10009489 3300028800 Bacteria 11592
209 Ga0265338_10016554 3300028800 Bacteria 8008
210 Ga0265338_10033383 3300028800 Bacteria 4996
211 Ga0265338_10038253 3300028800 Bacteria 4549
212 Ga0265338_10047712 3300028800 Bacteria 3908
213 Ga0265338_10051766 3300028800 Bacteria 3693
214 Ga0265324_10001456 3300029957 Bacteria 13495
215 Ga0265324_10001830 3300029957 Bacteria 11539
216 Ga0265324_10010382 3300029957 Bacteria 3592
217 Ga0316182_1162671 3300030745 Bacteria 5732
218 Ga0316182_1324665 3300030745 Bacteria 8735
219 Ga0265330_10000889 3300031235 Bacteria 18598
220 Ga0265332_10013167 3300031238 Bacteria 3666
221 Ga0265328_10001432 3300031239 Bacteria 10982
222 Ga0265320_10005063 3300031240 Bacteria 8524
223 Ga0265320_10006706 3300031240 Bacteria 7234
224 Ga0265320_10018126 3300031240 Unclassified 3886
225 Ga0265325_10019069 3300031241 Bacteria 3796
226 Ga0265329_10006463 3300031242 Bacteria 4645
227 Ga0265339_10014878 3300031249 Bacteria 4678
228 Ga0265339_10039660 3300031249 Unclassified 2621
229 Ga0265331_10001265 3300031250 Bacteria 18908
230 Ga0265327_10000025 3300031251 Bacteria 380054
231 Ga0265327_10002613 3300031251 Bacteria 18624
232 Ga0265327_10006268 3300031251 Bacteria 9582
233 Ga0265327_10052062 3300031251 Bacteria 2133
234 Ga0265316_10061198 3300031344 Unclassified 2924
235 Ga0265316_10065828 3300031344 Unclassified 2805
236 Ga0265313_10008615 3300031595 Bacteria 6748
237 Ga0265314_10033106 3300031711 Bacteria 3794
238 Ga0265342_10004616 3300031712 Bacteria 10747
239 Ga0307406_10000001 3300031901 Bacteria 638191
240 Ga0307406_10000145 3300031901 Bacteria 42161
241 Ga0307412_10014008 3300031911 Bacteria 4721
242 Ga0373959_0000343 3300034820 Bacteria 9484
243 Ga0395899_0053095 3300037312 Bacteria 3002
244 Ga0395900_0000001 3300037418 Bacteria 931146
245 Ga0395900_0000305 3300037418 Bacteria 73205
246 Ga0395900_0005726 3300037418 Bacteria 12989
247 Ga0395900_0026302 3300037418 Bacteria 5959
248 Ga0395900_0093033 3300037418 Bacteria 3097
249 Ga0395898_0000002 3300037466 Bacteria 931013
250 Ga0395898_0010622 3300037466 Bacteria 9618
251 Ga0395898_0030664 3300037466 Bacteria 5380
252 Ga0395905_0007614 3300037471 Bacteria 10752
253 Ga0395905_0044214 3300037471 Bacteria 4180
254 Ga0395901_0000006 3300038443 Bacteria 514112
255 Ga0395901_0002382 3300038443 Bacteria 19127
256 Ga0395901_0028691 3300038443 Bacteria 5725
257 Ga0395901_0052925 3300038443 Bacteria 4220
258 Ga0395901_0075530 3300038443 Bacteria 3515
259 Ga0395901_0132394 3300038443 Bacteria 2620
260 Ga0439464_0000096 3300042439 Bacteria 13017
261 Ga0453683_0013369 3300044673 Bacteria 5362
262 Ga0453683_0040934 3300044673 Unclassified 2909
263 Ga0466965_0000229 3300044683 Bacteria 17865
264 Ga0453684_0000652 3300044712 Bacteria 125090
265 Ga0453684_0001189 3300044712 Bacteria 80442
266 Ga0453684_0001957 3300044712 Bacteria 53082
267 Ga0453684_0003639 3300044712 Bacteria 34251
268 Ga0453684_0030570 3300044712 Bacteria 7604
269 Ga0451576_0140151 3300045051 Bacteria 2522
270 Ga0495638_0000132 3300046460 Bacteria 120039
271 Ga0495622_0000049 3300046557 Bacteria 108606
272 Ga0495658_0004104 3300046683 Bacteria 7171
273 Ga0495649_0003928 3300046694 Bacteria 9827
274 Ga0495660_0000005 3300046810 Bacteria 574567
275 Ga0495660_0007885 3300046810 Bacteria 6251
276 Ga0495672_0000010 3300047320 Bacteria 545038
277 Ga0496118_0031909 3300048921 Bacteria 4353
278 Ga0501034_0001632 3300049571 Bacteria 29045
279 Ga0501034_0003872 3300049571 Bacteria 16844
280 Ga0501080_0003543 3300049742 Bacteria 13753
281 Ga0501083_0002397 3300049744 Bacteria 12839
282 nmdc:mga03683_49_c4 3300050489 Bacteria 19085
283 nmdc:mga03n38_72_c1 3300050490 Bacteria 21488
284 nmdc:mga00v17_10024_c1 3300050491 Bacteria 5157
285 nmdc:mga00v17_169_c1 3300050491 Bacteria 38312
286 nmdc:mga00v17_211_c1 3300050491 Bacteria 35324
287 nmdc:mga00v17_5049_c1 3300050491 Bacteria 6928
288 nmdc:mga00v17_5654_c1 3300050491 Bacteria 6596
289 nmdc:mga0yw44_131_c1 3300050492 Bacteria 25689
290 nmdc:mga0yw44_1_c1 3300050492 Bacteria 702221
291 nmdc:mga0yw44_22433_c1 3300050492 Bacteria 3540
292 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
293 nmdc:mga0yw44_3_c1 3300050492 Bacteria 561857
294 nmdc:mga0yw44_4_c1 3300050492 Bacteria 450247
295 nmdc:mga0yw44_59343_c1 3300050492 Bacteria 2340
296 nmdc:mga0k408_107_c1 3300050493 Bacteria 40466
297 nmdc:mga0k408_159_c1 3300050493 Bacteria 35027
298 nmdc:mga0k408_16387_c1 3300050493 Bacteria 4112
299 nmdc:mga0k408_1_c1 3300050493 Bacteria 1089059
300 nmdc:mga0k408_2987_c2 3300050493 Bacteria 7400
301 nmdc:mga0k408_645_c1 3300050493 Bacteria 19198
302 nmdc:mga06z11_12_c1 3300050494 Bacteria 100611
303 nmdc:mga06z11_99_c1 3300050494 Bacteria 36699
304 nmdc:mga04h51_1556_c1 3300050495 Bacteria 5335
305 nmdc:mga04h51_1_c1 3300050495 Bacteria 273320
306 nmdc:mga07m45_5280_c2 3300050496 Bacteria 5966
307 nmdc:mga07m45_98839_c1 3300050496 Bacteria 1675
308 nmdc:mga0sz30_2_c1 3300050516 Bacteria 626403
309 nmdc:mga0sz30_3_c8 3300050516 Bacteria 110150
310 Ga0500610_0000103 3300053079 Bacteria 25503
311 Ga0500643_000043 3300053087 Bacteria 157905
312 Ga0500643_000776 3300053087 Bacteria 20748
313 Ga0500643_001279 3300053087 Bacteria 14856
314 Ga0500644_0000419 3300053088 Bacteria 19939
315 Ga0500644_0000867 3300053088 Bacteria 9895
316 Ga0500583_0000145 3300053092 Bacteria 30109
317 Ga0500583_0002080 3300053092 Bacteria 5927
318 Ga0500583_0002702 3300053092 Bacteria 5406
319 Ga0500651_0000001 3300053093 Bacteria 529808
320 Ga0500651_0000036 3300053093 Bacteria 104352
321 Ga0500651_0000225 3300053093 Bacteria 35223
322 Ga0500651_0001368 3300053093 Bacteria 12225
323 Ga0500566_0000001 3300053094 Bacteria 1101031
324 Ga0500641_0000001 3300053096 Bacteria 1115973
325 Ga0500650_0009271 3300053098 Bacteria 3941
326 Ga0500555_000001 3300053103 Bacteria 1353713
327 Ga0500555_000002 3300053103 Bacteria 1314346
328 Ga0500562_000001 3300053108 Bacteria 1178987
329 Ga0500562_000002 3300053108 Bacteria 977234
330 Ga0500593_000001 3300053117 Bacteria 784404
331 Ga0500594_0000001 3300053118 Bacteria 1178472
332 Ga0500594_0000074 3300053118 Bacteria 31465
333 Ga0500614_000001 3300053123 Bacteria 1274484
334 Ga0500614_004043 3300053123 Bacteria 3122
335 Ga0500628_000042 3300053129 Bacteria 46597
336 Ga0500642_0001735 3300053130 Bacteria 6287
337 Ga0500652_000001 3300053131 Bacteria 946868
338 Ga0500652_000028 3300053131 Bacteria 92605
339 Ga0500655_001094 3300053133 Bacteria 5197
340 Ga0500655_005039 3300053133 Bacteria 2378
341 Ga0500561_0000001 3300053137 Bacteria 957685
342 Ga0500577_0000069 3300053142 Bacteria 23367
343 Ga0500577_0000100 3300053142 Bacteria 20548
344 Ga0500577_0000725 3300053142 Bacteria 8436
345 Ga0500579_002613 3300053143 Bacteria 10695
346 Ga0500589_000028 3300053147 Bacteria 63762
347 Ga0500616_0000005 3300053153 Bacteria 961725
348 Ga0500649_000011 3300053722 Bacteria 87970
349 Ga0500570_000004 3300053724 Bacteria 133101
350 Ga0500570_000030 3300053724 Bacteria 35041
351 Ga0500611_000754 3300053727 Bacteria 3339
352 Ga0068855_100000001
353 JGI24741J21665_1000243
354 JGI24740J21852_10001643
355 JGI24740J21852_10010102
356 JGI24737J22298_10000030
357 JGI24737J22298_10000232
358 JGI24735J21928_10000064
359 JGI24735J21928_10000102
360 JGI24738J21930_10000555
361 JGI24742J22300_10000092
362 rootH2_10000244
363 rootL2_10158957
364 rootH1_10052692
365 rootH1_10137221
366 Ga0065715_10089076
367 Ga0070658_10000015
368 Ga0070658_10000020
369 Ga0070658_10000024
370 Ga0070658_10000403
371 Ga0070676_10002540
372 Ga0070683_100095170
373 Ga0070666_10053245
374 Ga0070680_100008972
375 Ga0070682_100001227
376 Ga0070682_100043659
377 Ga0070660_100000121
378 Ga0070660_100001371
379 Ga0070660_100037448
380 Ga0070661_100006110
381 Ga0070661_100015998
382 Ga0070671_100000001
383 Ga0070671_100009373
384 Ga0070674_100016820
385 Ga0070674_100018540
386 Ga0070673_100000033
387 Ga0070659_100004161
388 Ga0070659_100005304
389 Ga0070659_100014773
390 Ga0070667_100000001
391 Ga0070667_100007183
392 Ga0070713_100025428
393 Ga0070681_10000608
394 Ga0070685_10000864
395 Ga0070685_10000870
396 Ga0070706_100000179
397 Ga0070679_100000459
398 Ga0068853_100077540
399 Ga0070672_100007741
400 Ga0068855_100000005
401 Ga0068855_100000136
402 Ga0070664_100000517
403 Ga0070664_100011907
404 Ga0068857_100000002
405 Ga0068857_100055233
406 Ga0068854_100023589
407 Ga0068856_100000027
408 Ga0068856_100000029
409 Ga0068856_100000037
410 Ga0068856_100054301
411 Ga0068852_100000108
412 Ga0068852_100013748
413 Ga0068858_100009086
414 Ga0068860_100026426
415 Ga0081455_10000008
416 Ga0081539_10003847
417 Ga0075365_10000008
418 Ga0075365_10000010
419 Ga0075365_10000137
420 Ga0075365_10000293
421 Ga0075365_10031331
422 Ga0075368_10000643
423 Ga0075363_100000063
424 Ga0075364_10000100
425 Ga0075364_10000236
426 Ga0075364_10004729
427 Ga0075364_10012379
428 Ga0075364_10012755
429 Ga0075364_10028217
430 Ga0075364_10031505
431 Ga0075362_10000153
432 Ga0075367_10000072
433 Ga0075367_10005271
434 Ga0075369_10000001
435 Ga0075369_10000433
436 Ga0075366_10000059
437 Ga0075366_10000067
438 Ga0075366_10000069
439 Ga0075366_10000132
440 Ga0075366_10000728
441 Ga0075366_10012124
442 Ga0097621_100000001
443 Ga0097621_100015881
444 Ga0075370_10000628
445 Ga0068871_100000002
446 Ga0068865_100000726
447 Ga0105240_10000003
448 Ga0105240_10000050
449 Ga0105240_10105661
450 Ga0105245_10000001
451 Ga0105245_10000200
452 Ga0105245_10003448
453 Ga0105243_10000001
454 Ga0105243_10005590
455 Ga0105242_10000001
456 Ga0105242_10003164
457 Ga0105242_10135433
458 Ga0105237_10017172
459 Ga0105238_10000721
460 Ga0105238_10017531
461 Ga0105238_10055121
462 Ga0105032_100015
463 Ga0105028_100017
464 Ga0105028_100064
465 Ga0105239_10000301
466 Ga0105246_10000105
467 Ga0105246_10002817
468 Ga0105246_10019030
469 Ga0157373_10002357
470 Ga0157373_10006748
471 Ga0157373_10026065
472 Ga0157371_10000105
473 Ga0157371_10001903
474 Ga0157371_10004076
475 Ga0157371_10054802
476 Ga0157370_10000520
477 Ga0157369_10000003
478 Ga0157369_10000075
479 Ga0157369_10000832
480 Ga0157369_10001459
481 Ga0157369_10016781
482 Ga0157369_10031671
483 Ga0157374_10000096
484 Ga0157372_10000090
485 Ga0157372_10050033
486 Ga0163163_10001538
487 Ga0157377_10009382
488 Ga0157376_10000001
489 Ga0157376_10000083
490 Ga0207680_10039610
491 Ga0207647_10000338
492 Ga0207647_10001068
493 Ga0207645_10005423
494 Ga0207705_10000011
495 Ga0207705_10000047
496 Ga0207705_10000115
497 Ga0207705_10000202
498 Ga0207705_10005521
499 Ga0207684_10000250
500 Ga0207654_10016857
501 Ga0207707_10095591
502 Ga0207695_10000005
503 Ga0207695_10006558
504 Ga0207695_10107318
505 Ga0207671_10005485
506 Ga0207660_10010199
507 Ga0207657_10000125
508 Ga0207657_10003549
509 Ga0207657_10007688
510 Ga0207649_10009573
511 Ga0207652_10007743
512 Ga0207652_10023350
513 Ga0207694_10007085
514 Ga0207687_10000001
515 Ga0207687_10000004
516 Ga0207687_10004516
517 Ga0207687_10038343
518 Ga0207644_10000001
519 Ga0207644_10007503
520 Ga0207690_10000679
521 Ga0207690_10006074
522 Ga0207706_10000090
523 Ga0207686_10000001
524 Ga0207686_10006199
525 Ga0207709_10000002
526 Ga0207691_10040250
527 Ga0207661_10067531
528 Ga0207679_10000186
529 Ga0207667_10000003
530 Ga0207667_10000060
531 Ga0207667_10000196
532 Ga0207651_10000255
533 Ga0207658_10000003
534 Ga0207658_10005100
535 Ga0207703_10013321
536 Ga0207639_10058436
537 Ga0207702_10000001
538 Ga0207702_10002541
539 Ga0207674_10000001
540 Ga0207674_10001624
541 Ga0207674_10034552
542 Ga0207674_10086407
543 Ga0207683_10040332
544 Ga0207698_10002144
545 Ga0207698_10014210
546 Ga0209813_10000001
547 Ga0209813_10001456
548 Ga0268264_10022424
549 Ga0265337_1001633
550 Ga0265337_1010443
551 Ga0265326_10000495
552 Ga0265319_1006559
553 Ga0265334_10006606
554 Ga0265318_10009247
555 Ga0265323_10008925
556 Ga0265322_10000981
557 Ga0265338_10000313
558 Ga0265338_10001475
559 Ga0265338_10009489
560 Ga0265338_10016554
561 Ga0265338_10033383
562 Ga0265338_10038253
563 Ga0265338_10047712
564 Ga0265338_10051766
565 Ga0265324_10001456
566 Ga0265324_10001830
567 Ga0265324_10010382
568 Ga0316182_1162671
569 Ga0316182_1324665
570 Ga0265330_10000889
571 Ga0265332_10013167
572 Ga0265328_10001432
573 Ga0265320_10005063
574 Ga0265320_10006706
575 Ga0265320_10018126
576 Ga0265325_10019069
577 Ga0265329_10006463
578 Ga0265339_10014878
579 Ga0265339_10039660
580 Ga0265331_10001265
581 Ga0265327_10000025
582 Ga0265327_10002613
583 Ga0265327_10006268
584 Ga0265327_10052062
585 Ga0265316_10061198
586 Ga0265316_10065828
587 Ga0265313_10008615
588 Ga0265314_10033106
589 Ga0265342_10004616
590 Ga0307406_10000001
591 Ga0307406_10000145
592 Ga0307412_10014008
593 Ga0373959_0000343
594 Ga0395899_0053095
595 Ga0395900_0000001
596 Ga0395900_0000305
597 Ga0395900_0005726
598 Ga0395900_0026302
599 Ga0395900_0093033
600 Ga0395898_0000002
601 Ga0395898_0010622
602 Ga0395898_0030664
603 Ga0395905_0007614
604 Ga0395905_0044214
605 Ga0395901_0000006
606 Ga0395901_0002382
607 Ga0395901_0028691
608 Ga0395901_0052925
609 Ga0395901_0075530
610 Ga0395901_0132394
611 Ga0439464_0000096
612 Ga0453683_0013369
613 Ga0453683_0040934
614 Ga0466965_0000229
615 Ga0453684_0000652
616 Ga0453684_0001189
617 Ga0453684_0001957
618 Ga0453684_0003639
619 Ga0453684_0030570
620 Ga0451576_0140151
621 Ga0495638_0000132
622 Ga0495622_0000049
623 Ga0495658_0004104
624 Ga0495649_0003928
625 Ga0495660_0000005
626 Ga0495660_0007885
627 Ga0495672_0000010
628 Ga0496118_0031909
629 Ga0501034_0001632
630 Ga0501034_0003872
631 Ga0501080_0003543
632 Ga0501083_0002397
633 nmdc:mga03683_49_c4
634 nmdc:mga03n38_72_c1
635 nmdc:mga00v17_10024_c1
636 nmdc:mga00v17_169_c1
637 nmdc:mga00v17_211_c1
638 nmdc:mga00v17_5049_c1
639 nmdc:mga00v17_5654_c1
640 nmdc:mga0yw44_131_c1
641 nmdc:mga0yw44_1_c1
642 nmdc:mga0yw44_22433_c1
643 nmdc:mga0yw44_2_c1
644 nmdc:mga0yw44_3_c1
645 nmdc:mga0yw44_4_c1
646 nmdc:mga0yw44_59343_c1
647 nmdc:mga0k408_107_c1
648 nmdc:mga0k408_159_c1
649 nmdc:mga0k408_16387_c1
650 nmdc:mga0k408_1_c1
651 nmdc:mga0k408_2987_c2
652 nmdc:mga0k408_645_c1
653 nmdc:mga06z11_12_c1
654 nmdc:mga06z11_99_c1
655 nmdc:mga04h51_1556_c1
656 nmdc:mga04h51_1_c1
657 nmdc:mga07m45_5280_c2
658 nmdc:mga07m45_98839_c1
659 nmdc:mga0sz30_2_c1
660 nmdc:mga0sz30_3_c8
661 Ga0500610_0000103
662 Ga0500643_000043
663 Ga0500643_000776
664 Ga0500643_001279
665 Ga0500644_0000419
666 Ga0500644_0000867
667 Ga0500583_0000145
668 Ga0500583_0002080
669 Ga0500583_0002702
670 Ga0500651_0000001
671 Ga0500651_0000036
672 Ga0500651_0000225
673 Ga0500651_0001368
674 Ga0500566_0000001
675 Ga0500641_0000001
676 Ga0500650_0009271
677 Ga0500555_000001
678 Ga0500555_000002
679 Ga0500562_000001
680 Ga0500562_000002
681 Ga0500593_000001
682 Ga0500594_0000001
683 Ga0500594_0000074
684 Ga0500614_000001
685 Ga0500614_004043
686 Ga0500628_000042
687 Ga0500642_0001735
688 Ga0500652_000001
689 Ga0500652_000028
690 Ga0500655_001094
691 Ga0500655_005039
692 Ga0500561_0000001
693 Ga0500577_0000069
694 Ga0500577_0000100
695 Ga0500577_0000725
696 Ga0500579_002613
697 Ga0500589_000028
698 Ga0500616_0000005
699 Ga0500649_000011
700 Ga0500570_000004
701 Ga0500570_000030
702 Ga0500611_000754

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07973

tRNA_SAD

Threonyl and Alanyl tRNA synthetase second additional domain

632

685

0.93

PF01411

tRNA-synt_2c

tRNA synthetases class II (A)

21

573

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1riq-assembly1.cif.gz_A the crystal structure of the catalytic fragment of the alanyl-trna synthetase 0.9105 1 463
3hy1-assembly2.cif.gz_B crystal structure of catalytic fragment of e. coli alars g237a in complex with sersa 0.8887 1 460
3htz-assembly1.cif.gz_A crystal structure of the catalytic fragment of alanyl-trna synthetase in complex with l-serine: re-refined 0.8853 1 463
2e1b-assembly1.cif.gz_A crystal structure of the alax-m trans-editing enzyme from pyrococcus horikoshii 0.8792 479 631
3hy1-assembly2.cif.gz_B crystal structure of catalytic fragment of e. coli alars g237a in complex with sersa 0.8786 1 460
ID Description Score Start End Superfamily
af_Q2FXV9_4_242_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8953 1 274 3.30.930.10
af_Q2FXV9_4_242_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.8881 1 274 3.30.930.10
af_P40825_614_789_3.30.980.10 Alpha Beta;2-Layer Sandwich;Threonyl-tRNA Synthetase; Chain A, domain 2;Threonyl-trna Synthetase; Chain A, domain 2 0.884 481 631 3.30.980.10
2e1bA02 Alpha Beta;2-Layer Sandwich;Threonyl-tRNA Synthetase; Chain A, domain 2;Threonyl-trna Synthetase; Chain A, domain 2 0.8792 479 631 3.30.980.10
af_A0A2R8QSU7_595_766_3.30.980.10 Alpha Beta;2-Layer Sandwich;Threonyl-tRNA Synthetase; Chain A, domain 2;Threonyl-trna Synthetase; Chain A, domain 2 0.8767 481 631 3.30.980.10
ID Description Score Start End GO Terms
AF-A0A258BLH3-F1-model_v4 alanine--tRNA ligase (EC 6.1.1.7) 0.9809 1 253 GO:0000049
GO:0002161
GO:0004813
GO:0005524
GO:0006419
AF-A0A258BLH3-F1-model_v4 alanine--tRNA ligase (EC 6.1.1.7) 0.9771 1 253 GO:0000049
GO:0002161
GO:0004813
GO:0005524
GO:0006419
AF-A0A5N8YXI7-F1-model_v4 Alanine--tRNA ligase 0.9717 479 631 GO:0000049
GO:0002161
GO:0004813
GO:0005524
GO:0005829
GO:0006419
AF-A0A4U6QCN4-F1-model_v4 alanine--tRNA ligase (EC 6.1.1.7) 0.9695 1 466 GO:0000049
GO:0002161
GO:0004813
GO:0005524
GO:0005737
GO:0006419
AF-A0A2G6GI81-F1-model_v4 alanine--tRNA ligase (EC 6.1.1.7) 0.9681 1 110 GO:0000049
GO:0002161
GO:0004813
GO:0005524
GO:0005829
GO:0006419

Map