F418684

General Info

Members Datasets Scaffolds Average Seq Length
351 237 702 733

Family's Representative Sequence

Representative Sequence 3300031456|Ga0307513_10000008|Ga0307513_10000008336
Length 811
Sequence MAPTPVASRTALPPEGADFPWGGPAENRPHPWRVPLRVACRASLALVLIATCARPAWAIATFDEVKREFRPSDTLILDRNGEVIQRLRTDATVRRGQWVALPDISPALRTALVLSEDKRFYEHSGVDWRAVSSAAWGNLWNTKTRGASTLSMQLAGLLDEDWRAAAGGRSISQKIGQTVSAQVLETRWRKDQILEAYLNLVPFRGELVGIDALSRTLFGKAAHGLDEREAAIAAALVRAPNAKMAQVSQRACGVLKTMQAPAKADCEGLDLFATAALQRRAFDATEGVAPHFSRRLLSVQAEPVEARRSKQTDTSTGSVRTVKSTLYAPLQRFAVATLIQHLRELRGRHVEDGAIVVLDNASGEVLAWVGSSGELSGAAEVDGVLALRQPGSTLKPFLYAQAIAERRITAASLLDDSSAHINTAGGLYIPQNYDRQFKGLVSSRTALGASLNVPAVRTLVMVSPDAFHKQLQAVGLPLKETGDYYGYSLALGSSEVSLLSLTNAYRTLANGGRHSPIALSLSKGHPVRVEGLAEKPKASTSSARTEFTQAIDPRAAFIATDILADPMARARTFGTDSVLATRFWTAVKTGTSKDMRDNWALGFSQRYTVGVWVGNASGAPMWDVSGTSGAAPVWAALMKHLHQREPSRAPAPPPGLVQKNVQFGAEAGMPLEAARSEWFIRGTEQTLFAINSVASDVEGIRARSQKRVKNSSDGATARITAPASGTIIALDPDIPPKHQRVSFSAEGRGTRWLMDGKEFARGPQAQWMPWPGRHVVQLLDAGGKVADEIKLEVRGAGVREASARGGAPAAR

Samples

Sample ID Description Type Environment
1 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
2 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
9 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
10 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
11 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
12 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
13 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
17 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
18 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
19 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
20 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
21 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
25 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
51 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
67 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
71 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
76 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
77 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
78 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
79 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
80 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
81 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
84 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
87 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
88 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
89 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
90 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
91 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
92 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
94 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
113 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
117 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
118 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
119 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
120 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
121 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
122 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
123 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
126 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
127 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
128 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
129 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
130 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
133 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
134 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
135 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
136 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
137 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
138 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
139 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
140 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
141 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
142 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
143 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
144 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
145 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
146 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
147 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
148 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
151 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
152 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
153 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
170 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
171 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
172 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
173 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
176 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
177 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
178 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
179 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
182 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
183 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
184 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
185 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
186 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
187 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
188 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
189 2547132374 Acidovorax radicis N35 Isolate Unclassified
190 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
191 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
192 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
193 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
194 2643221570 Acidovorax sp. Root568 Isolate Unclassified
195 2643221609 Acidovorax sp. Root217 Isolate Unclassified
196 2643221611 Acidovorax sp. Root219 Isolate Unclassified
197 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
198 2643221652 Acidovorax sp. Root402 Isolate Unclassified
199 2643221658 Variovorax sp. Root411 Isolate Unclassified
200 2643221672 Variovorax sp. Root434 Isolate Unclassified
201 2643221683 Variovorax sp. Root473 Isolate Unclassified
202 2643221717 Acidovorax sp. Root267 Isolate Unclassified
203 2738541277 Variovorax sp. GV051 Isolate Unclassified
204 2738541307 Variovorax sp. GV008 Isolate Unclassified
205 2738543013 Variovorax sp. BT01 Isolate Unclassified
206 2738543019 Variovorax sp. GV040 Isolate Unclassified
207 2818991446 Variovorax sp. 1180 Isolate Unclassified
208 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
209 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
210 2842677519 Variovorax sp. R-72495 Isolate Unclassified
211 2842733646 Variovorax sp. R-72446 Isolate Unclassified
212 2842747753 Variovorax sp. R-72060 Isolate Unclassified
213 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
214 2885198086 Variovorax sp. 679 Isolate Unclassified
215 2885211737 Variovorax sp. 553 Isolate Unclassified
216 2899924645 Variovorax sp. 369 Isolate Unclassified
217 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
218 2904456579 Variovorax sp. 2002 Isolate Unclassified
219 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
220 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
221 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
222 2928037797 Variovorax sp. 1126 Isolate Unclassified
223 2928044640 Variovorax sp. 1128 Isolate Unclassified
224 2928051484 Variovorax sp. 1133 Isolate Unclassified
225 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
226 2928070936 Variovorax gossypii 1167 Isolate Unclassified
227 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
228 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
229 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
230 2929520902 Variovorax beijingensis 502 Isolate Unclassified
231 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
232 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
233 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
234 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
235 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
236 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
237 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.19
Metatranscriptomes 0
Isolates 14.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 34.19
Nodule 0.85
Rhizoplane 4.56
Rhizosphere 40.74
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307513_10000008 3300031456 Bacteria 442128
2 JGI25155J39150_1000240 3300002704 Bacteria 21244
3 JGI25156J39149_1000031 3300002705 Bacteria 124983
4 JGI25154J39366_1000049 3300002738 Bacteria 124995
5 JGI25157J39369_1000041 3300002741 Bacteria 124982
6 JGI25159J45721_1000763 3300002987 Bacteria 13973
7 JGI25159J45721_1002799 3300002987 Bacteria 6430
8 JGI25151J46595_10000396 3300003187 Bacteria 45250
9 JGI25160J50197_1000264 3300003354 Bacteria 39557
10 JGI25161J50226_1000198 3300003374 Bacteria 39503
11 Ga0055538_1000016 3300003751 Bacteria 305460
12 Ga0055539_1000021 3300003752 Bacteria 305460
13 Ga0055533_1000029 3300003756 Bacteria 305460
14 Ga0055525_1000033 3300003759 Bacteria 305460
15 Ga0055524_1000114 3300003775 Bacteria 94476
16 Ga0055536_1004244 3300003781 Bacteria 7394
17 Ga0055536_1008698 3300003781 Bacteria 4315
18 Ga0055534_1000088 3300003784 Bacteria 72004
19 Ga0055534_1000904 3300003784 Bacteria 13385
20 Ga0055534_1001105 3300003784 Bacteria 11469
21 Ga0055534_1003105 3300003784 Bacteria 5396
22 Ga0055528_1000135 3300003790 Bacteria 59436
23 Ga0055530_10005089 3300003791 Bacteria 6445
24 Ga0055540_1000445 3300003792 Bacteria 32473
25 Ga0055540_1000464 3300003792 Bacteria 31525
26 Ga0055540_1003727 3300003792 Bacteria 7206
27 Ga0055531_10000704 3300003794 Bacteria 28474
28 Ga0055531_10007590 3300003794 Bacteria 5881
29 Ga0055541_1000029 3300003841 Bacteria 199874
30 Ga0055541_1000045 3300003841 Bacteria 148620
31 Ga0055543_1000886 3300004625 Bacteria 14219
32 Ga0065165_1010506 3300005262 Bacteria 3986
33 Ga0070676_10009046 3300005328 Bacteria 5389
34 Ga0068869_100008845 3300005334 Bacteria 6514
35 Ga0070680_100000898 3300005336 Bacteria 21039
36 Ga0068868_100009473 3300005338 Bacteria 7014
37 Ga0070675_100030047 3300005354 Bacteria 4384
38 Ga0070667_100025546 3300005367 Bacteria 4911
39 Ga0070663_100000316 3300005455 Bacteria 25011
40 Ga0070663_100004991 3300005455 Bacteria 7838
41 Ga0070662_100005188 3300005457 Bacteria 8312
42 Ga0070662_100007556 3300005457 Bacteria 7054
43 Ga0070679_100022621 3300005530 Bacteria 6146
44 Ga0068853_100006590 3300005539 Bacteria 9247
45 Ga0068853_100026799 3300005539 Bacteria 4841
46 Ga0070672_100003941 3300005543 Bacteria 9677
47 Ga0070665_100007197 3300005548 Bacteria 11313
48 Ga0068855_100039922 3300005563 Bacteria 5571
49 Ga0068855_100045589 3300005563 Bacteria 5186
50 Ga0068857_100053348 3300005577 Bacteria 3587
51 Ga0068856_100065100 3300005614 Bacteria 3602
52 Ga0068852_100002548 3300005616 Bacteria 12557
53 Ga0068852_100079302 3300005616 Bacteria 2908
54 Ga0068859_100068175 3300005617 Bacteria 3593
55 Ga0068864_100069408 3300005618 Bacteria 3064
56 Ga0068861_100001314 3300005719 Bacteria 15580
57 Ga0068863_100037592 3300005841 Bacteria 4609
58 Ga0068858_100001964 3300005842 Bacteria 20998
59 Ga0068860_100011909 3300005843 Bacteria 8572
60 Ga0068860_100025810 3300005843 Bacteria 5667
61 Ga0068860_100074233 3300005843 Bacteria 3234
62 Ga0075364_10038738 3300006051 Bacteria 3089
63 Ga0075366_10008543 3300006195 Bacteria 5699
64 Ga0068871_100014284 3300006358 Bacteria 5916
65 Ga0097620_100068172 3300006931 Bacteria 3593
66 Ga0099826_10000527 3300006948 Bacteria 18882
67 Ga0105251_10002395 3300009011 Bacteria 14815
68 Ga0105240_10050488 3300009093 Bacteria 5243
69 Ga0105240_10089873 3300009093 Bacteria 3755
70 Ga0105240_10134652 3300009093 Bacteria 2960
71 Ga0105245_10010837 3300009098 Bacteria 7933
72 Ga0114129_10162049 3300009147 Bacteria 3054
73 Ga0105243_10003452 3300009148 Bacteria 12774
74 Ga0105243_10005312 3300009148 Bacteria 10066
75 Ga0105249_10028094 3300009553 Bacteria 5078
76 Ga0157373_10008444 3300013100 Bacteria 7648
77 Ga0157369_10024989 3300013105 Bacteria 6635
78 Ga0157378_10078980 3300013297 Bacteria 2970
79 Ga0163162_10054097 3300013306 Bacteria 4036
80 Ga0157372_10006924 3300013307 Bacteria 12064
81 Ga0157375_10009557 3300013308 Bacteria 8513
82 Ga0157375_10012125 3300013308 Bacteria 7637
83 Ga0157375_10164653 3300013308 Bacteria 2362
84 Ga0157380_10005893 3300014326 Bacteria 8575
85 Ga0157380_10033045 3300014326 Bacteria 3982
86 Ga0182008_10012802 3300014497 Bacteria 4423
87 Ga0182008_10028261 3300014497 Bacteria 2836
88 Ga0157379_10000896 3300014968 Bacteria 24095
89 Ga0182007_10000252 3300015262 Bacteria 36019
90 Ga0182007_10000549 3300015262 Bacteria 22146
91 Ga0183362_10001 3300015683 Bacteria 2046624
92 Ga0163161_10000105 3300017792 Bacteria 80620
93 Ga0163161_10013297 3300017792 Bacteria 5724
94 Ga0213872_10000060 3300021361 Bacteria 100249
95 Ga0213872_10001947 3300021361 Bacteria 12595
96 Ga0213872_10002696 3300021361 Bacteria 10243
97 Ga0209435_100014 3300025206 Bacteria 322129
98 Ga0209784_100033 3300025224 Bacteria 305649
99 Ga0209566_100037 3300025225 Bacteria 305649
100 Ga0209674_100055 3300025226 Bacteria 305649
101 Ga0209563_100056 3300025230 Bacteria 305649
102 Ga0207425_1000343 3300025245 Bacteria 32292
103 Ga0209646_1000001 3300025246 Bacteria 3092932
104 Ga0209026_1000073 3300025250 Bacteria 205399
105 Ga0209677_100034 3300025253 Bacteria 305649
106 Ga0209759_1000013 3300025256 Bacteria 399300
107 Ga0209129_1000024 3300025258 Bacteria 417268
108 Ga0209129_1000085 3300025258 Bacteria 181765
109 Ga0209129_1001368 3300025258 Bacteria 13693
110 Ga0209129_1009084 3300025258 Bacteria 2670
111 Ga0209565_1000043 3300025263 Bacteria 235332
112 Ga0209565_1000046 3300025263 Bacteria 226073
113 Ga0209565_1000485 3300025263 Bacteria 29182
114 Ga0209565_1002765 3300025263 Bacteria 6081
115 Ga0209565_1002846 3300025263 Bacteria 5953
116 Ga0209673_1000008 3300025273 Bacteria 626013
117 Ga0209673_1000058 3300025273 Bacteria 269028
118 Ga0209673_1000288 3300025273 Bacteria 94017
119 Ga0209673_1001373 3300025273 Bacteria 23971
120 Ga0209130_1000181 3300025284 Bacteria 89402
121 Ga0209130_1000269 3300025284 Bacteria 65107
122 Ga0209130_1000464 3300025284 Bacteria 42120
123 Ga0209130_1000869 3300025284 Bacteria 24731
124 Ga0209675_1000010 3300025291 Bacteria 541927
125 Ga0209675_1000136 3300025291 Bacteria 99301
126 Ga0209675_1000576 3300025291 Bacteria 26472
127 Ga0209675_1001397 3300025291 Bacteria 14026
128 Ga0209675_1001705 3300025291 Bacteria 12141
129 Ga0209675_1006705 3300025291 Bacteria 4564
130 Ga0209676_1000007 3300025292 Bacteria 1029371
131 Ga0209676_1000028 3300025292 Bacteria 559745
132 Ga0209676_1000173 3300025292 Bacteria 153411
133 Ga0209676_1000194 3300025292 Bacteria 136666
134 Ga0209676_1001432 3300025292 Bacteria 22537
135 Ga0209676_1003515 3300025292 Bacteria 9570
136 Ga0209676_1004673 3300025292 Bacteria 7517
137 Ga0209025_1000122 3300025294 Bacteria 206064
138 Ga0209025_1000267 3300025294 Bacteria 121798
139 Ga0209025_1000404 3300025294 Bacteria 87744
140 Ga0209025_1001753 3300025294 Bacteria 26033
141 Ga0209564_1000183 3300025295 Bacteria 150409
142 Ga0209564_1000198 3300025295 Bacteria 138511
143 Ga0209564_1000279 3300025295 Bacteria 104927
144 Ga0209564_1000443 3300025295 Bacteria 71364
145 Ga0209758_1000049 3300025297 Bacteria 345104
146 Ga0209758_1006071 3300025297 Bacteria 8895
147 Ga0209050_1000002 3300025298 Bacteria 1792849
148 Ga0209050_1000003 3300025298 Bacteria 1609245
149 Ga0209050_1001990 3300025298 Bacteria 19146
150 Ga0209050_1011924 3300025298 Bacteria 4053
151 Ga0209256_1000001 3300025299 Bacteria 2166974
152 Ga0209256_1000098 3300025299 Bacteria 204152
153 Ga0209256_1000140 3300025299 Bacteria 152770
154 Ga0207426_1000038 3300025302 Bacteria 441522
155 Ga0207426_1000053 3300025302 Bacteria 384818
156 Ga0207426_1000117 3300025302 Bacteria 224652
157 Ga0207426_1003096 3300025302 Bacteria 9506
158 Ga0207426_1005189 3300025302 Bacteria 6052
159 Ga0209051_1000003 3300025303 Bacteria 1609245
160 Ga0209051_1000159 3300025303 Bacteria 126836
161 Ga0209051_1000194 3300025303 Bacteria 107213
162 Ga0209051_1000353 3300025303 Bacteria 68321
163 Ga0209051_1000646 3300025303 Bacteria 39595
164 Ga0209051_1001046 3300025303 Bacteria 26104
165 Ga0209051_1001620 3300025303 Bacteria 18357
166 Ga0209051_1010370 3300025303 Bacteria 4717
167 Ga0209257_1000002 3300025304 Bacteria 1767052
168 Ga0209257_1000020 3300025304 Bacteria 773356
169 Ga0209257_1000022 3300025304 Bacteria 765258
170 Ga0209257_1000475 3300025304 Bacteria 73111
171 Ga0209257_1001958 3300025304 Bacteria 22204
172 Ga0209257_1007171 3300025304 Bacteria 6846
173 Ga0209257_1008576 3300025304 Bacteria 5759
174 Ga0207713_1006348 3300025735 Bacteria 7215
175 Ga0207657_10055008 3300025919 Bacteria 3439
176 Ga0207681_10035834 3300025923 Bacteria 3271
177 Ga0207687_10015560 3300025927 Bacteria 4989
178 Ga0207687_10034124 3300025927 Bacteria 3454
179 Ga0207706_10002525 3300025933 Bacteria 17859
180 Ga0207709_10001019 3300025935 Bacteria 20709
181 Ga0207709_10004400 3300025935 Bacteria 8155
182 Ga0207669_10014757 3300025937 Bacteria 3923
183 Ga0207691_10011429 3300025940 Bacteria 8518
184 Ga0207689_10009977 3300025942 Bacteria 8189
185 Ga0207689_10017371 3300025942 Bacteria 6089
186 Ga0207668_10023507 3300025972 Bacteria 3963
187 Ga0207658_10003219 3300025986 Bacteria 11606
188 Ga0207658_10010350 3300025986 Bacteria 6335
189 Ga0207677_10008711 3300026023 Bacteria 5680
190 Ga0207677_10013259 3300026023 Bacteria 4770
191 Ga0207703_10005763 3300026035 Bacteria 9927
192 Ga0207639_10012528 3300026041 Bacteria 5908
193 Ga0207639_10054710 3300026041 Bacteria 3052
194 Ga0207678_10001102 3300026067 Bacteria 24760
195 Ga0207678_10008140 3300026067 Bacteria 9243
196 Ga0207674_10011596 3300026116 Bacteria 9900
197 Ga0207675_100010745 3300026118 Bacteria 8578
198 Ga0207698_10010049 3300026142 Bacteria 6060
199 Ga0207698_10035190 3300026142 Bacteria 3661
200 Ga0209282_1007499 3300027666 Bacteria 6835
201 Ga0268265_10031032 3300028380 Bacteria 3856
202 Ga0268264_10002389 3300028381 Bacteria 16545
203 Ga0268264_10013003 3300028381 Bacteria 6842
204 Ga0307515_10002248 3300028794 Bacteria 42320
205 Ga0307515_10004838 3300028794 Bacteria 27552
206 Ga0307515_10033423 3300028794 Bacteria 8469
207 Ga0316177_1054726 3300030731 Bacteria 5373
208 Ga0314311_1021157 3300030733 Bacteria 4940
209 Ga0316178_1001058 3300030735 Bacteria 7009
210 Ga0316181_1205968 3300030744 Bacteria 5197
211 Ga0265330_10000044 3300031235 Bacteria 113679
212 Ga0265332_10000046 3300031238 Bacteria 113777
213 Ga0265325_10004010 3300031241 Bacteria 9409
214 Ga0265327_10001070 3300031251 Bacteria 38165
215 Ga0265327_10004975 3300031251 Bacteria 11411
216 Ga0307513_10000020 3300031456 Bacteria 228745
217 Ga0307509_10007168 3300031507 Bacteria 14690
218 Ga0307508_10000555 3300031616 Bacteria 44419
219 Ga0307514_10000970 3300031649 Bacteria 42862
220 Ga0307514_10009942 3300031649 Bacteria 7970
221 Ga0265314_10000130 3300031711 Bacteria 113776
222 Ga0307516_10001374 3300031730 Bacteria 33687
223 Ga0307516_10002074 3300031730 Bacteria 27283
224 Ga0307516_10047810 3300031730 Bacteria 4212
225 Ga0307406_10033721 3300031901 Bacteria 3135
226 Ga0307510_10000773 3300033180 Bacteria 33035
227 Ga0307510_10002601 3300033180 Bacteria 20609
228 Ga0395905_0000427 3300037471 Bacteria 58785
229 Ga0436361_0174260 3300039447 Bacteria 101834
230 Ga0436361_0444457 3300039447 Bacteria 38464
231 Ga0439442_000825 3300042002 Bacteria 6410
232 Ga0439432_019055 3300042006 Bacteria 2289
233 Ga0439449_0017494 3300042007 Bacteria 2692
234 Ga0450899_001380 3300042135 Bacteria 2721
235 Ga0439446_0004829 3300042156 Bacteria 3436
236 Ga0450893_0001088 3300042532 Bacteria 4083
237 Ga0453684_0017336 3300044712 Bacteria 11160
238 Ga0495627_003055 3300046453 Bacteria 7626
239 Ga0495592_0000202 3300046454 Bacteria 50799
240 Ga0495592_0035936 3300046454 Bacteria 3732
241 Ga0495590_0002099 3300046457 Bacteria 8351
242 Ga0495639_0007994 3300046475 Bacteria 4542
243 Ga0495616_0004622 3300046513 Bacteria 8639
244 Ga0495628_0000827 3300046516 Bacteria 28693
245 Ga0495631_0000082 3300046518 Bacteria 61773
246 Ga0495654_0002620 3300046530 Bacteria 11464
247 Ga0495597_0011455 3300046542 Bacteria 4299
248 Ga0495625_0000245 3300046660 Bacteria 85443
249 Ga0495599_0000644 3300046678 Bacteria 19732
250 Ga0495623_0043695 3300046679 Bacteria 2850
251 Ga0495600_0009516 3300046809 Bacteria 6007
252 Ga0495683_0004143 3300047323 Bacteria 8295
253 Ga0496100_0011752 3300048903 Bacteria 4993
254 Ga0496101_0021929 3300048904 Bacteria 4389
255 Ga0496102_0007310 3300048905 Bacteria 9427
256 Ga0496102_0021388 3300048905 Bacteria 5720
257 Ga0496103_0011690 3300048906 Bacteria 5206
258 Ga0496105_0032799 3300048908 Bacteria 4263
259 Ga0496106_0008467 3300048909 Bacteria 7610
260 Ga0496107_0017324 3300048910 Bacteria 5066
261 Ga0496108_0057360 3300048911 Bacteria 3272
262 Ga0496110_0024356 3300048913 Bacteria 5158
263 Ga0496110_0051089 3300048913 Bacteria 3632
264 Ga0496112_0011167 3300048915 Bacteria 8190
265 Ga0496115_0002003 3300048918 Bacteria 14563
266 Ga0496116_0009445 3300048919 Bacteria 8307
267 Ga0496116_0012152 3300048919 Bacteria 7047
268 Ga0496117_0005895 3300048920 Bacteria 12660
269 Ga0496117_0008768 3300048920 Bacteria 9541
270 Ga0496117_0021604 3300048920 Bacteria 5199
271 Ga0496118_0004635 3300048921 Bacteria 16131
272 Ga0496118_0007297 3300048921 Bacteria 11764
273 Ga0496121_0037808 3300048924 Bacteria 4282
274 Ga0496121_0067467 3300048924 Bacteria 2899
275 Ga0496122_0000063 3300048925 Bacteria 241378
276 Ga0496122_0009154 3300048925 Bacteria 10493
277 Ga0496123_0000045 3300048926 Bacteria 249294
278 Ga0496123_0024096 3300048926 Bacteria 4636
279 Ga0496124_0027505 3300048927 Bacteria 5104
280 Ga0496125_0009027 3300048928 Bacteria 10327
281 Ga0496125_0011689 3300048928 Bacteria 8759
282 nmdc:mga03683_11642_c1 3300050489 Bacteria 3190
283 nmdc:mga00v17_33981_c1 3300050491 Bacteria 3026
284 nmdc:mga0k408_10253_c1 3300050493 Bacteria 5065
285 nmdc:mga07m45_12003_c1 3300050496 Bacteria 4567
286 nmdc:mga07m45_16526_c1 3300050496 Bacteria 3951
287 nmdc:mga07m45_34359_c1 3300050496 Bacteria 2818
288 nmdc:mga07m45_3726_c1 3300050496 Bacteria 7375
289 nmdc:mga07m45_7568_c1 3300050496 Bacteria 3546
290 Ga0495601_0000840 3300053077 Bacteria 16664
291 Ga0500571_000039 3300053110 Bacteria 41202
292 Ga0500593_000221 3300053117 Bacteria 23510
293 Ga0500593_003414 3300053117 Bacteria 6000
294 Ga0500595_001377 3300053119 Bacteria 13050
295 Ga0500658_0011655 3300053134 Bacteria 3239
296 Ga0500559_0004999 3300053136 Bacteria 6156
297 Ga0500590_003042 3300053148 Bacteria 7635
298 Ga0500634_0000814 3300053161 Bacteria 10944
299 Ga0500645_000090 3300053730 Bacteria 70818
300 2511246540 2511231002 Bacteria 5042903
301 2511386771 2511231026 Bacteria 5225445
302 2513227743 2513020051 Bacteria 6053213
303 2548499891 2547132374 Bacteria 5530232
304 2599625528 2599185214 Bacteria 8209958
305 2599673541 2599185226 Bacteria 8233575
306 2599683211 2599185227 Bacteria 8246414
307 2599695301 2599185229 Bacteria 8216126
308 2643868118 2643221570 Bacteria 5103772
309 2644059689 2643221609 Bacteria 6756331
310 2644074832 2643221611 Bacteria 6820941
311 2644162333 2643221628 Bacteria 5745828
312 2644293728 2643221652 Bacteria 5140275
313 2644324508 2643221658 Bacteria 6064537
314 2644396357 2643221672 Bacteria 6322190
315 2644464611 2643221683 Bacteria 5749203
316 2644644791 2643221717 Bacteria 5676132
317 2738719138 2738541277 Bacteria 7458140
318 2738880166 2738541307 Bacteria 8606193
319 2739248099 2738543013 Bacteria 5618633
320 2739281900 2738543019 Bacteria 7459457
321 2819599631 2818991446 Bacteria 7757362
322 2831271097 2831265667 Bacteria 7184833
323 2838055686 2838054893 Bacteria 7451788
324 2842680830 2842677519 Bacteria 5615038
325 2842734257 2842733646 Bacteria 5716726
326 2842749491 2842747753 Bacteria 5578255
327 2884816542 2884811622 Bacteria 5552861
328 2885200769 2885198086 Bacteria 7212419
329 2885214448 2885211737 Bacteria 7212420
330 2899927738 2899924645 Bacteria 7487985
331 2904450576 2904449895 Bacteria 6927402
332 2904456602 2904456579 Bacteria 6819253
333 2904549887 2904541872 Bacteria 8915136
334 2919047407 2919046199 Bacteria 5567169
335 2919462884 2919462493 Bacteria 5817112
336 2928041983 2928037797 Bacteria 7273642
337 2928049547 2928044640 Bacteria 7271509
338 2928051777 2928051484 Bacteria 7773759
339 2928065531 2928064002 Bacteria 7419480
340 2928072989 2928070936 Bacteria 8062541
341 2928086791 2928084124 Bacteria 7159212
342 2928121170 2928115317 Bacteria 6477646
343 2929161856 2929160207 Bacteria 9075316
344 2929521292 2929520902 Bacteria 6765052
345 2939632674 2939631187 Bacteria 6118131
346 2945913733 2945909444 Bacteria 7065066
347 2945949315 2945945610 Bacteria 5951079
348 2945973358 2945972063 Bacteria 6086495
349 2945990872 2945984333 Bacteria 7358892
350 2954771047 2954767861 Bacteria 5535784
351 2990713522 2990710928 Bacteria 5002431
352 Ga0307513_10000008
353 JGI25155J39150_1000240
354 JGI25156J39149_1000031
355 JGI25154J39366_1000049
356 JGI25157J39369_1000041
357 JGI25159J45721_1000763
358 JGI25159J45721_1002799
359 JGI25151J46595_10000396
360 JGI25160J50197_1000264
361 JGI25161J50226_1000198
362 Ga0055538_1000016
363 Ga0055539_1000021
364 Ga0055533_1000029
365 Ga0055525_1000033
366 Ga0055524_1000114
367 Ga0055536_1004244
368 Ga0055536_1008698
369 Ga0055534_1000088
370 Ga0055534_1000904
371 Ga0055534_1001105
372 Ga0055534_1003105
373 Ga0055528_1000135
374 Ga0055530_10005089
375 Ga0055540_1000445
376 Ga0055540_1000464
377 Ga0055540_1003727
378 Ga0055531_10000704
379 Ga0055531_10007590
380 Ga0055541_1000029
381 Ga0055541_1000045
382 Ga0055543_1000886
383 Ga0065165_1010506
384 Ga0070676_10009046
385 Ga0068869_100008845
386 Ga0070680_100000898
387 Ga0068868_100009473
388 Ga0070675_100030047
389 Ga0070667_100025546
390 Ga0070663_100000316
391 Ga0070663_100004991
392 Ga0070662_100005188
393 Ga0070662_100007556
394 Ga0070679_100022621
395 Ga0068853_100006590
396 Ga0068853_100026799
397 Ga0070672_100003941
398 Ga0070665_100007197
399 Ga0068855_100039922
400 Ga0068855_100045589
401 Ga0068857_100053348
402 Ga0068856_100065100
403 Ga0068852_100002548
404 Ga0068852_100079302
405 Ga0068859_100068175
406 Ga0068864_100069408
407 Ga0068861_100001314
408 Ga0068863_100037592
409 Ga0068858_100001964
410 Ga0068860_100011909
411 Ga0068860_100025810
412 Ga0068860_100074233
413 Ga0075364_10038738
414 Ga0075366_10008543
415 Ga0068871_100014284
416 Ga0097620_100068172
417 Ga0099826_10000527
418 Ga0105251_10002395
419 Ga0105240_10050488
420 Ga0105240_10089873
421 Ga0105240_10134652
422 Ga0105245_10010837
423 Ga0114129_10162049
424 Ga0105243_10003452
425 Ga0105243_10005312
426 Ga0105249_10028094
427 Ga0157373_10008444
428 Ga0157369_10024989
429 Ga0157378_10078980
430 Ga0163162_10054097
431 Ga0157372_10006924
432 Ga0157375_10009557
433 Ga0157375_10012125
434 Ga0157375_10164653
435 Ga0157380_10005893
436 Ga0157380_10033045
437 Ga0182008_10012802
438 Ga0182008_10028261
439 Ga0157379_10000896
440 Ga0182007_10000252
441 Ga0182007_10000549
442 Ga0183362_10001
443 Ga0163161_10000105
444 Ga0163161_10013297
445 Ga0213872_10000060
446 Ga0213872_10001947
447 Ga0213872_10002696
448 Ga0209435_100014
449 Ga0209784_100033
450 Ga0209566_100037
451 Ga0209674_100055
452 Ga0209563_100056
453 Ga0207425_1000343
454 Ga0209646_1000001
455 Ga0209026_1000073
456 Ga0209677_100034
457 Ga0209759_1000013
458 Ga0209129_1000024
459 Ga0209129_1000085
460 Ga0209129_1001368
461 Ga0209129_1009084
462 Ga0209565_1000043
463 Ga0209565_1000046
464 Ga0209565_1000485
465 Ga0209565_1002765
466 Ga0209565_1002846
467 Ga0209673_1000008
468 Ga0209673_1000058
469 Ga0209673_1000288
470 Ga0209673_1001373
471 Ga0209130_1000181
472 Ga0209130_1000269
473 Ga0209130_1000464
474 Ga0209130_1000869
475 Ga0209675_1000010
476 Ga0209675_1000136
477 Ga0209675_1000576
478 Ga0209675_1001397
479 Ga0209675_1001705
480 Ga0209675_1006705
481 Ga0209676_1000007
482 Ga0209676_1000028
483 Ga0209676_1000173
484 Ga0209676_1000194
485 Ga0209676_1001432
486 Ga0209676_1003515
487 Ga0209676_1004673
488 Ga0209025_1000122
489 Ga0209025_1000267
490 Ga0209025_1000404
491 Ga0209025_1001753
492 Ga0209564_1000183
493 Ga0209564_1000198
494 Ga0209564_1000279
495 Ga0209564_1000443
496 Ga0209758_1000049
497 Ga0209758_1006071
498 Ga0209050_1000002
499 Ga0209050_1000003
500 Ga0209050_1001990
501 Ga0209050_1011924
502 Ga0209256_1000001
503 Ga0209256_1000098
504 Ga0209256_1000140
505 Ga0207426_1000038
506 Ga0207426_1000053
507 Ga0207426_1000117
508 Ga0207426_1003096
509 Ga0207426_1005189
510 Ga0209051_1000003
511 Ga0209051_1000159
512 Ga0209051_1000194
513 Ga0209051_1000353
514 Ga0209051_1000646
515 Ga0209051_1001046
516 Ga0209051_1001620
517 Ga0209051_1010370
518 Ga0209257_1000002
519 Ga0209257_1000020
520 Ga0209257_1000022
521 Ga0209257_1000475
522 Ga0209257_1001958
523 Ga0209257_1007171
524 Ga0209257_1008576
525 Ga0207713_1006348
526 Ga0207657_10055008
527 Ga0207681_10035834
528 Ga0207687_10015560
529 Ga0207687_10034124
530 Ga0207706_10002525
531 Ga0207709_10001019
532 Ga0207709_10004400
533 Ga0207669_10014757
534 Ga0207691_10011429
535 Ga0207689_10009977
536 Ga0207689_10017371
537 Ga0207668_10023507
538 Ga0207658_10003219
539 Ga0207658_10010350
540 Ga0207677_10008711
541 Ga0207677_10013259
542 Ga0207703_10005763
543 Ga0207639_10012528
544 Ga0207639_10054710
545 Ga0207678_10001102
546 Ga0207678_10008140
547 Ga0207674_10011596
548 Ga0207675_100010745
549 Ga0207698_10010049
550 Ga0207698_10035190
551 Ga0209282_1007499
552 Ga0268265_10031032
553 Ga0268264_10002389
554 Ga0268264_10013003
555 Ga0307515_10002248
556 Ga0307515_10004838
557 Ga0307515_10033423
558 Ga0316177_1054726
559 Ga0314311_1021157
560 Ga0316178_1001058
561 Ga0316181_1205968
562 Ga0265330_10000044
563 Ga0265332_10000046
564 Ga0265325_10004010
565 Ga0265327_10001070
566 Ga0265327_10004975
567 Ga0307513_10000020
568 Ga0307509_10007168
569 Ga0307508_10000555
570 Ga0307514_10000970
571 Ga0307514_10009942
572 Ga0265314_10000130
573 Ga0307516_10001374
574 Ga0307516_10002074
575 Ga0307516_10047810
576 Ga0307406_10033721
577 Ga0307510_10000773
578 Ga0307510_10002601
579 Ga0395905_0000427
580 Ga0436361_0174260
581 Ga0436361_0444457
582 Ga0439442_000825
583 Ga0439432_019055
584 Ga0439449_0017494
585 Ga0450899_001380
586 Ga0439446_0004829
587 Ga0450893_0001088
588 Ga0453684_0017336
589 Ga0495627_003055
590 Ga0495592_0000202
591 Ga0495592_0035936
592 Ga0495590_0002099
593 Ga0495639_0007994
594 Ga0495616_0004622
595 Ga0495628_0000827
596 Ga0495631_0000082
597 Ga0495654_0002620
598 Ga0495597_0011455
599 Ga0495625_0000245
600 Ga0495599_0000644
601 Ga0495623_0043695
602 Ga0495600_0009516
603 Ga0495683_0004143
604 Ga0496100_0011752
605 Ga0496101_0021929
606 Ga0496102_0007310
607 Ga0496102_0021388
608 Ga0496103_0011690
609 Ga0496105_0032799
610 Ga0496106_0008467
611 Ga0496107_0017324
612 Ga0496108_0057360
613 Ga0496110_0024356
614 Ga0496110_0051089
615 Ga0496112_0011167
616 Ga0496115_0002003
617 Ga0496116_0009445
618 Ga0496116_0012152
619 Ga0496117_0005895
620 Ga0496117_0008768
621 Ga0496117_0021604
622 Ga0496118_0004635
623 Ga0496118_0007297
624 Ga0496121_0037808
625 Ga0496121_0067467
626 Ga0496122_0000063
627 Ga0496122_0009154
628 Ga0496123_0000045
629 Ga0496123_0024096
630 Ga0496124_0027505
631 Ga0496125_0009027
632 Ga0496125_0011689
633 nmdc:mga03683_11642_c1
634 nmdc:mga00v17_33981_c1
635 nmdc:mga0k408_10253_c1
636 nmdc:mga07m45_12003_c1
637 nmdc:mga07m45_16526_c1
638 nmdc:mga07m45_34359_c1
639 nmdc:mga07m45_3726_c1
640 nmdc:mga07m45_7568_c1
641 Ga0495601_0000840
642 Ga0500571_000039
643 Ga0500593_000221
644 Ga0500593_003414
645 Ga0500595_001377
646 Ga0500658_0011655
647 Ga0500559_0004999
648 Ga0500590_003042
649 Ga0500634_0000814
650 Ga0500645_000090
651 2511246540
652 2511386771
653 2513227743
654 2548499891
655 2599625528
656 2599673541
657 2599683211
658 2599695301
659 2643868118
660 2644059689
661 2644074832
662 2644162333
663 2644293728
664 2644324508
665 2644396357
666 2644464611
667 2644644791
668 2738719138
669 2738880166
670 2739248099
671 2739281900
672 2819599631
673 2831271097
674 2838055686
675 2842680830
676 2842734257
677 2842749491
678 2884816542
679 2885200769
680 2885214448
681 2899927738
682 2904450576
683 2904456602
684 2904549887
685 2919047407
686 2919462884
687 2928041983
688 2928049547
689 2928051777
690 2928065531
691 2928072989
692 2928086791
693 2928121170
694 2929161856
695 2929521292
696 2939632674
697 2945913733
698 2945949315
699 2945973358
700 2945990872
701 2954771047
702 2990713522

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06832

BiPBP_C

Penicillin-Binding Protein C-terminus Family

707

791

0.93

PF00912

Transgly

Transglycosylase

80

259

0.91

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

353

638

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zc6-assembly2.cif.gz_D penicillin-binding protein 1a (pbp 1a) acyl-enzyme complex (tebipenem) from streptococcus pneumoniae 0.8401 311 624
6hzo-assembly2.cif.gz_B error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.8395 317 610
2v2f-assembly1.cif.gz_F crystal structure of pbp1a from drug-resistant strain 5204 from streptococcus pneumoniae 0.8369 311 624
7onk-assembly2.cif.gz_B crystal structure of pbp3 from p. aeruginosa in complex with aic499 0.8352 308 610
7onw-assembly1.cif.gz_A crystal structure of pbp3 from e. coli in complex with aic499 0.8352 310 616
ID Description Score Start End Superfamily
af_P76577_253_589_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8716 311 621 3.40.710.10
3oc2A03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8596 374 529 3.40.710.10
4bjpA03 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8531 374 530 3.40.710.10
3ue1A01 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8443 306 617 3.40.710.10
2ap1A01 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8372 706 750 3.30.420.40
ID Description Score Start End GO Terms
AF-K1YYL1-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9368 373 593 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A2M7CJW4-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9172 319 658 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A2N6AB66-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9169 311 621 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A0G1TN14-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.9138 319 650 GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-K1YYL1-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9089 373 593 GO:0008658
GO:0008955
GO:0009252
GO:0030288

Map