F419645

General Info

Members Datasets Scaffolds Average Seq Length
354 220 709 512

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100041189|Ga0070669_1000411892
Length 578
Sequence LACSDAGKRHAAWSGVTVCHTVHQVDKRCTPKAQESFSYEVAAEVCNSHYIFQHKKDSITSSSLSLYLFTMKHLPFIDLLVIALYLLGMVLTGLWFARKGKDANQFTKASGNIPAWAIGLSIYATFLSSNTFLGVPGKAFGSNWNAFVFSLSMPLAAWISAKYFIPFYRQSGEISAYTHLEHRFGAWARTYAVVCFILTQLARIGSVFFGIALSLQALTGFSMSTIMIVVGIIIIIYTVMGGIEAVIWTEVVQAIIKTLGAVLILYLVISKMPGGVQQIIEIGQRDDKFSLGSFNPDFTTSTFWVILLYGFFINLTNFGIDQTYVQRYHATTSQKSAAQSLWLCVKLYIPASFLFFIIGSCLYGYYSVHPELSDGIKLQAAAERLSPGATTQQIAALAATLKPSDYGDKVMPHFMVTSIPTGLVGLIGMNASATVFTEDIYKRYINKNITDKQTLRLLYISTFIFGVLGIVTGIAMIGVKSILDIWWQLSGILATGMLGLFLLGIISKRTKNVEAFIATIIGILVILWMSFPAIIPERYASLRNPLNTNMIIVIGTLAIFFAGVLLSRLRKKQDTVPA

Samples

Sample ID Description Type Environment
1 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
6 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
16 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
17 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
20 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
30 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
31 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
32 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
37 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
40 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
41 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
42 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
43 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
44 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
45 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
48 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
49 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
50 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
51 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
52 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
63 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
64 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
65 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
66 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
67 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
78 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
79 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
80 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
81 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
82 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
87 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
88 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
89 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
90 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
91 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
92 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
93 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
94 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
95 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
96 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
97 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
98 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
137 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
139 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
140 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
141 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
142 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
143 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
144 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
145 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
146 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
147 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
148 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
149 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
150 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
151 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
152 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
153 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
154 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
155 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
156 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
157 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
158 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
159 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
160 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
161 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
162 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
163 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
164 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
165 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
166 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
167 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
168 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
169 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
172 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
173 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
174 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
180 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
181 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
182 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
183 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
184 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
192 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
193 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
194 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
195 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
196 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
197 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
198 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
199 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
200 2738541302 Pedobacter sp. CF074 Isolate Unclassified
201 2738543023 Pedobacter sp. OK628 Isolate Unclassified
202 2739367651 Pedobacter sp. OK291 Isolate Unclassified
203 2739367656 Pedobacter sp. CF523 Isolate Unclassified
204 2739367663 Pedobacter sp. YR510 Isolate Unclassified
205 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
206 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
207 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
208 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
209 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
210 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
211 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
212 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
213 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
214 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
215 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
216 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
217 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
218 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
219 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
220 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.5
Metatranscriptomes 0
Isolates 6.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.99
Nodule 0
Rhizoplane 0.28
Rhizosphere 78.81
Stem 0
Stem Tuber 0
Unclassified 3.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070669_100041189 3300005353 Bacteria 3359
2 JGI24737J22298_10000635 3300001990 Bacteria 12359
3 JGI24735J21928_10000029 3300002067 Bacteria 81143
4 JGI24751J29686_10001459 3300002459 Bacteria 4947
5 JGI25152J39213_1000370 3300002773 Bacteria 27609
6 JGI25150J39212_1000057 3300002774 Bacteria 66456
7 JGI25151J46595_10000229 3300003187 Bacteria 66456
8 JGI25153J46596_10000164 3300003215 Bacteria 66576
9 JGI25153J46596_10014154 3300003215 Bacteria 3332
10 JGI25153J46596_10024583 3300003215 Bacteria 2170
11 rootH1_10113883 3300003316 Bacteria 4772
12 rootH1_10113883 3300003323 Bacteria 2167
13 rootH2_10001334 3300003320 Bacteria 238709
14 rootH2_10027250 3300003320 Bacteria 13046
15 rootH2_10244175 3300003320 Bacteria 3792
16 rootL2_10166241 3300003322 Bacteria 8680
17 rootH1_10034726 3300003323 Bacteria 37380
18 rootH1_10199420 3300003323 Bacteria 1684
19 rootH1_10223124 3300003323 Bacteria 4245
20 JGI25160J50197_1000603 3300003354 Bacteria 20112
21 Ga0055526_1026213 3300003771 Unclassified 1846
22 Ga0055536_1000011 3300003781 Bacteria 275969
23 Ga0055536_1012141 3300003781 Bacteria 3225
24 Ga0055528_1000179 3300003790 Bacteria 53605
25 Ga0055530_10000436 3300003791 Bacteria 37034
26 Ga0065165_1000280 3300005262 Bacteria 87088
27 Ga0065165_1000538 3300005262 Bacteria 57448
28 Ga0065165_1000892 3300005262 Bacteria 38556
29 Ga0065714_10004277 3300005288 Bacteria 13846
30 Ga0065704_10101928 3300005289 Bacteria 2221
31 Ga0070676_10021259 3300005328 Bacteria 3632
32 Ga0070690_100058166 3300005330 Bacteria 2482
33 Ga0070670_100071093 3300005331 Bacteria 2987
34 Ga0068869_100010250 3300005334 Bacteria 6106
35 Ga0070666_10000029 3300005335 Bacteria 141568
36 Ga0070680_100055807 3300005336 Bacteria 3228
37 Ga0068868_100020655 3300005338 Bacteria 4953
38 Ga0068868_100047553 3300005338 Bacteria 3363
39 Ga0070692_10029556 3300005345 Bacteria 2732
40 Ga0070675_100171307 3300005354 Bacteria 1872
41 Ga0070671_100012281 3300005355 Bacteria 6893
42 Ga0070674_100090580 3300005356 Bacteria 2206
43 Ga0070673_100030059 3300005364 Bacteria 4059
44 Ga0070659_100000705 3300005366 Bacteria 24305
45 Ga0070667_100039659 3300005367 Bacteria 3948
46 Ga0070667_100049854 3300005367 Bacteria 3527
47 Ga0070700_100009801 3300005441 Bacteria 5269
48 Ga0070678_100069428 3300005456 Bacteria 2631
49 Ga0070681_10073429 3300005458 Bacteria 3382
50 Ga0068867_100073660 3300005459 Bacteria 2557
51 Ga0070685_10000617 3300005466 Bacteria 19524
52 Ga0070698_100003362 3300005471 Bacteria 17606
53 Ga0070698_100006386 3300005471 Bacteria 12802
54 Ga0070698_100008107 3300005471 Bacteria 11358
55 Ga0070699_100108347 3300005518 Bacteria 2438
56 Ga0070679_100004621 3300005530 Bacteria 12709
57 Ga0070679_100082775 3300005530 Bacteria 3199
58 Ga0070684_100218623 3300005535 Bacteria 1738
59 Ga0068853_100045523 3300005539 Bacteria 3758
60 Ga0068853_100067222 3300005539 Bacteria 3113
61 Ga0070686_100087365 3300005544 Bacteria 2078
62 Ga0070665_100022149 3300005548 Bacteria 6391
63 Ga0068855_100006753 3300005563 Bacteria 13918
64 Ga0068855_100184669 3300005563 Unclassified 2356
65 Ga0068857_100003296 3300005577 Bacteria 13414
66 Ga0068854_100016944 3300005578 Bacteria 4868
67 Ga0068854_100027739 3300005578 Bacteria 3906
68 Ga0068856_100015789 3300005614 Bacteria 7302
69 Ga0068856_100061074 3300005614 Bacteria 3723
70 Ga0068859_100000035 3300005617 Bacteria 169846
71 Ga0068859_100120478 3300005617 Bacteria 2691
72 Ga0068859_100161725 3300005617 Bacteria 2318
73 Ga0068864_100017908 3300005618 Bacteria 5910
74 Ga0068851_10031969 3300005834 Bacteria 2617
75 Ga0068863_100009705 3300005841 Bacteria 9390
76 Ga0068858_100001641 3300005842 Bacteria 22831
77 Ga0068860_100002893 3300005843 Bacteria 17795
78 Ga0068860_100019304 3300005843 Bacteria 6615
79 Ga0075366_10000387 3300006195 Bacteria 20440
80 Ga0075366_10002047 3300006195 Bacteria 10233
81 Ga0097621_100007447 3300006237 Bacteria 7828
82 Ga0075428_100076192 3300006844 Bacteria 3662
83 Ga0075428_100184995 3300006844 Bacteria 2254
84 Ga0075430_100021811 3300006846 Bacteria 5443
85 Ga0075430_100036011 3300006846 Bacteria 4196
86 Ga0075431_100019293 3300006847 Bacteria 6950
87 Ga0075434_100035459 3300006871 Bacteria 4932
88 Ga0075429_100042867 3300006880 Bacteria 3937
89 Ga0068865_100045691 3300006881 Bacteria 3003
90 Ga0097620_100000035 3300006931 Bacteria 169846
91 Ga0097620_100120482 3300006931 Bacteria 2691
92 Ga0097620_100161721 3300006931 Bacteria 2318
93 Ga0105240_10000010 3300009093 Bacteria 537830
94 Ga0105240_10005683 3300009093 Bacteria 18511
95 Ga0105240_10057368 3300009093 Unclassified 4865
96 Ga0111539_10078768 3300009094 Bacteria 3876
97 Ga0111539_10206816 3300009094 Bacteria 2288
98 Ga0105247_10015009 3300009101 Bacteria 4644
99 Ga0105241_10000792 3300009174 Bacteria 24031
100 Ga0105241_10004492 3300009174 Bacteria 10318
101 Ga0105241_10011848 3300009174 Bacteria 6406
102 Ga0105241_10098686 3300009174 Unclassified 2318
103 Ga0105242_10057596 3300009176 Bacteria 3183
104 Ga0105237_10001655 3300009545 Bacteria 28910
105 Ga0105237_10005003 3300009545 Bacteria 15096
106 Ga0105237_10012707 3300009545 Bacteria 8859
107 Ga0105237_10040456 3300009545 Bacteria 4701
108 Ga0105238_10000177 3300009551 Bacteria 69509
109 Ga0105238_10006749 3300009551 Bacteria 11464
110 Ga0105238_10108037 3300009551 Bacteria 2763
111 Ga0105249_10001212 3300009553 Bacteria 22738
112 Ga0105249_10009823 3300009553 Bacteria 8386
113 Ga0105249_10017029 3300009553 Bacteria 6449
114 Ga0105249_10137757 3300009553 Bacteria 2338
115 Ga0105249_10143387 3300009553 Bacteria 2293
116 Ga0105239_10000509 3300010375 Bacteria 56261
117 Ga0105239_10022937 3300010375 Bacteria 6881
118 Ga0105239_10067970 3300010375 Unclassified 3916
119 Ga0105239_10189159 3300010375 Bacteria 2304
120 Ga0105246_10028509 3300011119 Unclassified 3668
121 Ga0105246_10047869 3300011119 Bacteria 2922
122 Ga0105246_10127555 3300011119 Unclassified 1895
123 Ga0157373_10000113 3300013100 Bacteria 63950
124 Ga0157373_10003571 3300013100 Bacteria 11753
125 Ga0157373_10006963 3300013100 Bacteria 8420
126 Ga0157373_10010623 3300013100 Bacteria 6775
127 Ga0157371_10000124 3300013102 Bacteria 117860
128 Ga0157371_10000760 3300013102 Bacteria 37271
129 Ga0157370_10021384 3300013104 Bacteria 6447
130 Ga0157370_10021739 3300013104 Bacteria 6391
131 Ga0157370_10024075 3300013104 Bacteria 6036
132 Ga0157370_10107279 3300013104 Bacteria 2612
133 Ga0157370_10109244 3300013104 Bacteria 2586
134 Ga0157369_10000002 3300013105 Bacteria 524510
135 Ga0157369_10012085 3300013105 Bacteria 9802
136 Ga0157369_10015703 3300013105 Bacteria 8532
137 Ga0157369_10023926 3300013105 Bacteria 6799
138 Ga0157378_10001152 3300013297 Bacteria 24031
139 Ga0157378_10061737 3300013297 Unclassified 3346
140 Ga0157378_10136964 3300013297 Bacteria 2270
141 Ga0157378_10225423 3300013297 Bacteria 1783
142 Ga0163162_10002758 3300013306 Bacteria 16686
143 Ga0163162_10003890 3300013306 Bacteria 14334
144 Ga0163162_10012020 3300013306 Bacteria 8442
145 Ga0163162_10055351 3300013306 Bacteria 3993
146 Ga0157372_10000001 3300013307 Bacteria 791349
147 Ga0157372_10008756 3300013307 Bacteria 10745
148 Ga0157372_10042528 3300013307 Bacteria 5026
149 Ga0157372_10083111 3300013307 Bacteria 3627
150 Ga0157375_10014547 3300013308 Bacteria 7024
151 Ga0157375_10035337 3300013308 Bacteria 4769
152 Ga0157375_10062814 3300013308 Bacteria 3692
153 Ga0157375_10075409 3300013308 Bacteria 3397
154 Ga0163163_10187099 3300014325 Bacteria 2118
155 Ga0157380_10003918 3300014326 Bacteria 10266
156 Ga0157380_10063401 3300014326 Bacteria 2963
157 Ga0157377_10113184 3300014745 Bacteria 1634
158 Ga0157376_10255301 3300014969 Bacteria 1639
159 Ga0182006_1000573 3300015261 Bacteria 27170
160 Ga0182006_1000597 3300015261 Bacteria 26372
161 Ga0182007_10000001 3300015262 Bacteria 1127301
162 Ga0163161_10000911 3300017792 Bacteria 22852
163 Ga0163161_10001010 3300017792 Bacteria 21437
164 Ga0163161_10057128 3300017792 Bacteria 2835
165 Ga0209436_101894 3300025208 Bacteria 6753
166 Ga0207425_1000007 3300025245 Bacteria 777411
167 Ga0209026_1000326 3300025250 Bacteria 48276
168 Ga0209026_1002557 3300025250 Bacteria 6719
169 Ga0209129_1000006 3300025258 Bacteria 777761
170 Ga0209673_1000014 3300025273 Bacteria 537082
171 Ga0209673_1000018 3300025273 Bacteria 458281
172 Ga0209676_1000001 3300025292 Bacteria 1852142
173 Ga0209676_1004309 3300025292 Bacteria 8012
174 Ga0209025_1000025 3300025294 Bacteria 524454
175 Ga0209564_1002814 3300025295 Bacteria 12917
176 Ga0209564_1003672 3300025295 Bacteria 10141
177 Ga0209758_1000016 3300025297 Bacteria 778557
178 Ga0209758_1001144 3300025297 Bacteria 34032
179 Ga0209758_1001717 3300025297 Bacteria 24515
180 Ga0209758_1025729 3300025297 Bacteria 2571
181 Ga0209050_1000016 3300025298 Bacteria 729149
182 Ga0209050_1000481 3300025298 Bacteria 70155
183 Ga0207426_1000060 3300025302 Bacteria 363139
184 Ga0207426_1000135 3300025302 Bacteria 202216
185 Ga0207426_1000718 3300025302 Bacteria 38438
186 Ga0207680_10000049 3300025903 Bacteria 57625
187 Ga0207647_10023357 3300025904 Bacteria 4089
188 Ga0207645_10003508 3300025907 Bacteria 11867
189 Ga0207645_10010607 3300025907 Bacteria 6320
190 Ga0207705_10026672 3300025909 Bacteria 4118
191 Ga0207654_10001055 3300025911 Bacteria 15026
192 Ga0207654_10015394 3300025911 Unclassified 3970
193 Ga0207654_10088818 3300025911 Bacteria 1879
194 Ga0207695_10000019 3300025913 Bacteria 732137
195 Ga0207695_10026025 3300025913 Bacteria 6536
196 Ga0207671_10000670 3300025914 Bacteria 44624
197 Ga0207671_10001400 3300025914 Bacteria 28062
198 Ga0207671_10002385 3300025914 Bacteria 20172
199 Ga0207657_10035696 3300025919 Unclassified 4456
200 Ga0207652_10000691 3300025921 Bacteria 32885
201 Ga0207652_10034390 3300025921 Unclassified 4271
202 Ga0207652_10076798 3300025921 Bacteria 2913
203 Ga0207694_10000551 3300025924 Bacteria 33984
204 Ga0207694_10004709 3300025924 Bacteria 10616
205 Ga0207650_10056315 3300025925 Bacteria 2921
206 Ga0207650_10112457 3300025925 Bacteria 2110
207 Ga0207690_10006823 3300025932 Bacteria 6769
208 Ga0207686_10041945 3300025934 Bacteria 2794
209 Ga0207670_10093526 3300025936 Bacteria 2130
210 Ga0207669_10004917 3300025937 Bacteria 5942
211 Ga0207669_10082799 3300025937 Bacteria 2061
212 Ga0207704_10023701 3300025938 Bacteria 3313
213 Ga0207689_10000668 3300025942 Bacteria 32713
214 Ga0207689_10007110 3300025942 Bacteria 9839
215 Ga0207689_10042702 3300025942 Bacteria 3749
216 Ga0207679_10101579 3300025945 Bacteria 2250
217 Ga0207667_10000309 3300025949 Bacteria 67726
218 Ga0207667_10041839 3300025949 Bacteria 4872
219 Ga0207651_10063784 3300025960 Bacteria 2575
220 Ga0207712_10000825 3300025961 Bacteria 22741
221 Ga0207712_10026250 3300025961 Bacteria 3878
222 Ga0207668_10050622 3300025972 Bacteria 2864
223 Ga0207640_10003563 3300025981 Bacteria 8393
224 Ga0207640_10036841 3300025981 Bacteria 3074
225 Ga0207658_10013170 3300025986 Bacteria 5646
226 Ga0207677_10021151 3300026023 Bacteria 3969
227 Ga0207639_10012631 3300026041 Bacteria 5887
228 Ga0207678_10032952 3300026067 Bacteria 4515
229 Ga0207708_10049635 3300026075 Bacteria 3196
230 Ga0207702_10020814 3300026078 Bacteria 5426
231 Ga0207702_10038999 3300026078 Bacteria 3979
232 Ga0207641_10000043 3300026088 Bacteria 186340
233 Ga0207641_10039507 3300026088 Bacteria 3947
234 Ga0207641_10195610 3300026088 Bacteria 1861
235 Ga0207648_10001468 3300026089 Bacteria 25938
236 Ga0207648_10001940 3300026089 Bacteria 22629
237 Ga0207676_10015952 3300026095 Bacteria 5435
238 Ga0207676_10028095 3300026095 Bacteria 4198
239 Ga0207674_10001219 3300026116 Bacteria 33514
240 Ga0207698_10011756 3300026142 Bacteria 5691
241 Ga0207428_10040613 3300027907 Bacteria 3771
242 Ga0268264_10002903 3300028381 Bacteria 14889
243 Ga0268264_10005672 3300028381 Bacteria 10585
244 Ga0307515_10000002 3300028794 Bacteria 1231751
245 Ga0307515_10000036 3300028794 Bacteria 332188
246 Ga0307515_10000311 3300028794 Bacteria 120044
247 Ga0307515_10038867 3300028794 Bacteria 7592
248 Ga0316177_1025195 3300030731 Bacteria 5834
249 Ga0316176_1002742 3300030732 Bacteria 81202
250 Ga0316183_1003610 3300030742 Bacteria 136078
251 Ga0265327_10000245 3300031251 Bacteria 108670
252 Ga0307408_100003187 3300031548 Bacteria 11295
253 Ga0307508_10001839 3300031616 Bacteria 23472
254 Ga0307508_10078403 3300031616 Bacteria 2884
255 Ga0307405_10000019 3300031731 Bacteria 167960
256 Ga0307407_10000078 3300031903 Bacteria 34709
257 Ga0307412_10085310 3300031911 Bacteria 2194
258 Ga0307409_100080891 3300031995 Bacteria 2624
259 Ga0307416_100000375 3300032002 Bacteria 23156
260 Ga0307414_10001977 3300032004 Bacteria 10626
261 Ga0307414_10002112 3300032004 Bacteria 10357
262 Ga0307414_10041205 3300032004 Bacteria 3125
263 Ga0307414_10130695 3300032004 Bacteria 1949
264 Ga0316584_0068394 3300036712 Bacteria 2662
265 Ga0395899_0000001 3300037312 Bacteria 1750322
266 Ga0395899_0004136 3300037312 Bacteria 11408
267 Ga0395900_0000048 3300037418 Bacteria 227760
268 Ga0395898_0129198 3300037466 Bacteria 2420
269 Ga0439449_0005288 3300042007 Bacteria 4950
270 Ga0466972_0007956 3300044658 Bacteria 5314
271 Ga0466966_0005631 3300044684 Bacteria 8238
272 Ga0466957_0000218 3300044842 Bacteria 27018
273 Ga0495650_0000025 3300046471 Bacteria 486001
274 Ga0495585_0000383 3300046492 Bacteria 42537
275 Ga0495585_0032473 3300046492 Bacteria 2957
276 Ga0495606_0000026 3300046507 Bacteria 259118
277 Ga0495606_0017752 3300046507 Bacteria 5366
278 Ga0495610_0000035 3300046512 Bacteria 189683
279 Ga0495610_0000062 3300046512 Bacteria 128923
280 Ga0495610_0000528 3300046512 Bacteria 38434
281 Ga0495616_0000434 3300046513 Bacteria 31938
282 Ga0495616_0006550 3300046513 Bacteria 7033
283 Ga0495648_0000864 3300046524 Bacteria 31952
284 Ga0495609_0001048 3300046538 Bacteria 19395
285 Ga0495609_0006255 3300046538 Bacteria 6108
286 Ga0495633_0000046 3300046558 Bacteria 167647
287 Ga0495633_0002714 3300046558 Bacteria 12277
288 Ga0495633_0004104 3300046558 Bacteria 9396
289 Ga0495668_0000070 3300046616 Bacteria 174051
290 Ga0495668_0080380 3300046616 Bacteria 1789
291 Ga0495625_0000008 3300046660 Bacteria 536165
292 Ga0495625_0000616 3300046660 Bacteria 51665
293 Ga0495625_0025919 3300046660 Bacteria 4437
294 Ga0495625_0058640 3300046660 Bacteria 2734
295 Ga0495661_0010652 3300046665 Bacteria 6265
296 Ga0495661_0057055 3300046665 Bacteria 2333
297 Ga0495649_0000006 3300046694 Bacteria 542188
298 Ga0495672_0006604 3300047320 Bacteria 8930
299 Ga0495686_0000097 3300047472 Bacteria 183450
300 Ga0495686_0010569 3300047472 Bacteria 6558
301 Ga0495686_0042236 3300047472 Bacteria 2901
302 Ga0495686_0068537 3300047472 Bacteria 2189
303 Ga0501298_002275 3300049521 Bacteria 2899
304 Ga0501032_0072343 3300049569 Bacteria 2298
305 Ga0501034_0030228 3300049571 Bacteria 5506
306 Ga0501034_0098933 3300049571 Bacteria 2912
307 Ga0501038_0108638 3300049574 Bacteria 2300
308 Ga0501043_0039603 3300049579 Bacteria 3704
309 Ga0501046_0028322 3300049580 Bacteria 4564
310 Ga0501073_0032414 3300049589 Unclassified 3724
311 Ga0501223_002218 3300049663 Bacteria 4346
312 Ga0501233_008321 3300049668 Bacteria 1995
313 Ga0501235_007608 3300049669 Bacteria 2360
314 Ga0501259_001578 3300049688 Bacteria 3792
315 Ga0501221_000287 3300049704 Bacteria 7507
316 Ga0501080_0027934 3300049742 Bacteria 5246
317 Ga0501035_0031009 3300049822 Bacteria 4869
318 nmdc:mga0k408_1183_c1 3300050493 Bacteria 14280
319 nmdc:mga0k408_14357_c1 3300050493 Bacteria 4362
320 nmdc:mga0k408_788_c1 3300050493 Bacteria 17454
321 nmdc:mga0k408_8037_c1 3300050493 Bacteria 5653
322 nmdc:mga09592_46353_c1 3300050508 Bacteria 3663
323 nmdc:mga06r32_40878_c1 3300050510 Bacteria 4404
324 nmdc:mga08y16_156955_c1 3300050511 Bacteria 2364
325 nmdc:mga08y16_77101_c1 3300050511 Unclassified 3475
326 Ga0500618_012522 3300053125 Bacteria 2220
327 Ga0500568_0001055 3300053139 Bacteria 18794
328 Ga0500588_0003059 3300053146 Bacteria 3492
329 Ga0500616_0008755 3300053153 Bacteria 6238
330 Ga0500622_0000281 3300053156 Bacteria 51900
331 Ga0500611_000005 3300053727 Bacteria 228837
332 Ga0501082_0034261 3300060353 Bacteria 4379
333 2522549044 2522125168 Bacteria 7376607
334 2599480244 2599185184 Bacteria 6430550
335 2738853323 2738541302 Bacteria 5944758
336 2739303286 2738543023 Bacteria 6767879
337 2739588726 2739367651 Bacteria 6359826
338 2739615783 2739367656 Bacteria 5152243
339 2739645404 2739367663 Bacteria 5040914
340 2842726126 2842722452 Bacteria 6263924
341 2842905987 2842903701 Bacteria 6986368
342 2842910399 2842909656 Bacteria 6185908
343 2852628640 2852627209 Bacteria 5896285
344 2857628468 2857627736 Bacteria 5625397
345 2890737908 2890737413 Bacteria 4269751
346 2896320394 2896317667 Bacteria 4606601
347 2898714915 2898713307 Bacteria 4110805
348 2902050104 2902048731 Bacteria 4976191
349 2919441726 2919437846 Bacteria 6199444
350 2928083480 2928078545 Bacteria 6534839
351 2928151257 2928147474 Bacteria 6512076
352 2932084555 2932082852 Bacteria 6563563
353 2946000739 2945997725 Bacteria 6404843
354 2954017622 2954016120 Bacteria 6446024
355 3003236103 3003233435 Bacteria 4458031
356 Ga0070669_100041189
357 JGI24737J22298_10000635
358 JGI24735J21928_10000029
359 JGI24751J29686_10001459
360 JGI25152J39213_1000370
361 JGI25150J39212_1000057
362 JGI25151J46595_10000229
363 JGI25153J46596_10000164
364 JGI25153J46596_10014154
365 JGI25153J46596_10024583
366 rootH1_10113883
367 rootH2_10001334
368 rootH2_10027250
369 rootH2_10244175
370 rootL2_10166241
371 rootH1_10034726
372 rootH1_10199420
373 rootH1_10223124
374 JGI25160J50197_1000603
375 Ga0055526_1026213
376 Ga0055536_1000011
377 Ga0055536_1012141
378 Ga0055528_1000179
379 Ga0055530_10000436
380 Ga0065165_1000280
381 Ga0065165_1000538
382 Ga0065165_1000892
383 Ga0065714_10004277
384 Ga0065704_10101928
385 Ga0070676_10021259
386 Ga0070690_100058166
387 Ga0070670_100071093
388 Ga0068869_100010250
389 Ga0070666_10000029
390 Ga0070680_100055807
391 Ga0068868_100020655
392 Ga0068868_100047553
393 Ga0070692_10029556
394 Ga0070675_100171307
395 Ga0070671_100012281
396 Ga0070674_100090580
397 Ga0070673_100030059
398 Ga0070659_100000705
399 Ga0070667_100039659
400 Ga0070667_100049854
401 Ga0070700_100009801
402 Ga0070678_100069428
403 Ga0070681_10073429
404 Ga0068867_100073660
405 Ga0070685_10000617
406 Ga0070698_100003362
407 Ga0070698_100006386
408 Ga0070698_100008107
409 Ga0070699_100108347
410 Ga0070679_100004621
411 Ga0070679_100082775
412 Ga0070684_100218623
413 Ga0068853_100045523
414 Ga0068853_100067222
415 Ga0070686_100087365
416 Ga0070665_100022149
417 Ga0068855_100006753
418 Ga0068855_100184669
419 Ga0068857_100003296
420 Ga0068854_100016944
421 Ga0068854_100027739
422 Ga0068856_100015789
423 Ga0068856_100061074
424 Ga0068859_100000035
425 Ga0068859_100120478
426 Ga0068859_100161725
427 Ga0068864_100017908
428 Ga0068851_10031969
429 Ga0068863_100009705
430 Ga0068858_100001641
431 Ga0068860_100002893
432 Ga0068860_100019304
433 Ga0075366_10000387
434 Ga0075366_10002047
435 Ga0097621_100007447
436 Ga0075428_100076192
437 Ga0075428_100184995
438 Ga0075430_100021811
439 Ga0075430_100036011
440 Ga0075431_100019293
441 Ga0075434_100035459
442 Ga0075429_100042867
443 Ga0068865_100045691
444 Ga0097620_100000035
445 Ga0097620_100120482
446 Ga0097620_100161721
447 Ga0105240_10000010
448 Ga0105240_10005683
449 Ga0105240_10057368
450 Ga0111539_10078768
451 Ga0111539_10206816
452 Ga0105247_10015009
453 Ga0105241_10000792
454 Ga0105241_10004492
455 Ga0105241_10011848
456 Ga0105241_10098686
457 Ga0105242_10057596
458 Ga0105237_10001655
459 Ga0105237_10005003
460 Ga0105237_10012707
461 Ga0105237_10040456
462 Ga0105238_10000177
463 Ga0105238_10006749
464 Ga0105238_10108037
465 Ga0105249_10001212
466 Ga0105249_10009823
467 Ga0105249_10017029
468 Ga0105249_10137757
469 Ga0105249_10143387
470 Ga0105239_10000509
471 Ga0105239_10022937
472 Ga0105239_10067970
473 Ga0105239_10189159
474 Ga0105246_10028509
475 Ga0105246_10047869
476 Ga0105246_10127555
477 Ga0157373_10000113
478 Ga0157373_10003571
479 Ga0157373_10006963
480 Ga0157373_10010623
481 Ga0157371_10000124
482 Ga0157371_10000760
483 Ga0157370_10021384
484 Ga0157370_10021739
485 Ga0157370_10024075
486 Ga0157370_10107279
487 Ga0157370_10109244
488 Ga0157369_10000002
489 Ga0157369_10012085
490 Ga0157369_10015703
491 Ga0157369_10023926
492 Ga0157378_10001152
493 Ga0157378_10061737
494 Ga0157378_10136964
495 Ga0157378_10225423
496 Ga0163162_10002758
497 Ga0163162_10003890
498 Ga0163162_10012020
499 Ga0163162_10055351
500 Ga0157372_10000001
501 Ga0157372_10008756
502 Ga0157372_10042528
503 Ga0157372_10083111
504 Ga0157375_10014547
505 Ga0157375_10035337
506 Ga0157375_10062814
507 Ga0157375_10075409
508 Ga0163163_10187099
509 Ga0157380_10003918
510 Ga0157380_10063401
511 Ga0157377_10113184
512 Ga0157376_10255301
513 Ga0182006_1000573
514 Ga0182006_1000597
515 Ga0182007_10000001
516 Ga0163161_10000911
517 Ga0163161_10001010
518 Ga0163161_10057128
519 Ga0209436_101894
520 Ga0207425_1000007
521 Ga0209026_1000326
522 Ga0209026_1002557
523 Ga0209129_1000006
524 Ga0209673_1000014
525 Ga0209673_1000018
526 Ga0209676_1000001
527 Ga0209676_1004309
528 Ga0209025_1000025
529 Ga0209564_1002814
530 Ga0209564_1003672
531 Ga0209758_1000016
532 Ga0209758_1001144
533 Ga0209758_1001717
534 Ga0209758_1025729
535 Ga0209050_1000016
536 Ga0209050_1000481
537 Ga0207426_1000060
538 Ga0207426_1000135
539 Ga0207426_1000718
540 Ga0207680_10000049
541 Ga0207647_10023357
542 Ga0207645_10003508
543 Ga0207645_10010607
544 Ga0207705_10026672
545 Ga0207654_10001055
546 Ga0207654_10015394
547 Ga0207654_10088818
548 Ga0207695_10000019
549 Ga0207695_10026025
550 Ga0207671_10000670
551 Ga0207671_10001400
552 Ga0207671_10002385
553 Ga0207657_10035696
554 Ga0207652_10000691
555 Ga0207652_10034390
556 Ga0207652_10076798
557 Ga0207694_10000551
558 Ga0207694_10004709
559 Ga0207650_10056315
560 Ga0207650_10112457
561 Ga0207690_10006823
562 Ga0207686_10041945
563 Ga0207670_10093526
564 Ga0207669_10004917
565 Ga0207669_10082799
566 Ga0207704_10023701
567 Ga0207689_10000668
568 Ga0207689_10007110
569 Ga0207689_10042702
570 Ga0207679_10101579
571 Ga0207667_10000309
572 Ga0207667_10041839
573 Ga0207651_10063784
574 Ga0207712_10000825
575 Ga0207712_10026250
576 Ga0207668_10050622
577 Ga0207640_10003563
578 Ga0207640_10036841
579 Ga0207658_10013170
580 Ga0207677_10021151
581 Ga0207639_10012631
582 Ga0207678_10032952
583 Ga0207708_10049635
584 Ga0207702_10020814
585 Ga0207702_10038999
586 Ga0207641_10000043
587 Ga0207641_10039507
588 Ga0207641_10195610
589 Ga0207648_10001468
590 Ga0207648_10001940
591 Ga0207676_10015952
592 Ga0207676_10028095
593 Ga0207674_10001219
594 Ga0207698_10011756
595 Ga0207428_10040613
596 Ga0268264_10002903
597 Ga0268264_10005672
598 Ga0307515_10000002
599 Ga0307515_10000036
600 Ga0307515_10000311
601 Ga0307515_10038867
602 Ga0316177_1025195
603 Ga0316176_1002742
604 Ga0316183_1003610
605 Ga0265327_10000245
606 Ga0307408_100003187
607 Ga0307508_10001839
608 Ga0307508_10078403
609 Ga0307405_10000019
610 Ga0307407_10000078
611 Ga0307412_10085310
612 Ga0307409_100080891
613 Ga0307416_100000375
614 Ga0307414_10001977
615 Ga0307414_10002112
616 Ga0307414_10041205
617 Ga0307414_10130695
618 Ga0316584_0068394
619 Ga0395899_0000001
620 Ga0395899_0004136
621 Ga0395900_0000048
622 Ga0395898_0129198
623 Ga0439449_0005288
624 Ga0466972_0007956
625 Ga0466966_0005631
626 Ga0466957_0000218
627 Ga0495650_0000025
628 Ga0495585_0000383
629 Ga0495585_0032473
630 Ga0495606_0000026
631 Ga0495606_0017752
632 Ga0495610_0000035
633 Ga0495610_0000062
634 Ga0495610_0000528
635 Ga0495616_0000434
636 Ga0495616_0006550
637 Ga0495648_0000864
638 Ga0495609_0001048
639 Ga0495609_0006255
640 Ga0495633_0000046
641 Ga0495633_0002714
642 Ga0495633_0004104
643 Ga0495668_0000070
644 Ga0495668_0080380
645 Ga0495625_0000008
646 Ga0495625_0000616
647 Ga0495625_0025919
648 Ga0495625_0058640
649 Ga0495661_0010652
650 Ga0495661_0057055
651 Ga0495649_0000006
652 Ga0495672_0006604
653 Ga0495686_0000097
654 Ga0495686_0010569
655 Ga0495686_0042236
656 Ga0495686_0068537
657 Ga0501298_002275
658 Ga0501032_0072343
659 Ga0501034_0030228
660 Ga0501034_0098933
661 Ga0501038_0108638
662 Ga0501043_0039603
663 Ga0501046_0028322
664 Ga0501073_0032414
665 Ga0501223_002218
666 Ga0501233_008321
667 Ga0501235_007608
668 Ga0501259_001578
669 Ga0501221_000287
670 Ga0501080_0027934
671 Ga0501035_0031009
672 nmdc:mga0k408_1183_c1
673 nmdc:mga0k408_14357_c1
674 nmdc:mga0k408_788_c1
675 nmdc:mga0k408_8037_c1
676 nmdc:mga09592_46353_c1
677 nmdc:mga06r32_40878_c1
678 nmdc:mga08y16_156955_c1
679 nmdc:mga08y16_77101_c1
680 Ga0500618_012522
681 Ga0500568_0001055
682 Ga0500588_0003059
683 Ga0500616_0008755
684 Ga0500622_0000281
685 Ga0500611_000005
686 Ga0501082_0034261
687 2522549044
688 2599480244
689 2738853323
690 2739303286
691 2739588726
692 2739615783
693 2739645404
694 2842726126
695 2842905987
696 2842910399
697 2852628640
698 2857628468
699 2890737908
700 2896320394
701 2898714915
702 2902050104
703 2919441726
704 2928083480
705 2928151257
706 2932084555
707 2946000739
708 2954017622
709 3003236103

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00474

SSF

Sodium:solute symporter family

106

522

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9285 5 513
5nva-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9095 5 513
5nv9-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.9094 5 516
5nv9-assembly1.cif.gz_A substrate-bound outward-open state of a na+-coupled sialic acid symporter reveals a novel na+-site 0.8875 5 516
7sl9-assembly1.cif.gz_A cryoem structure of smct1 0.862 3 513
ID Description Score Start End Superfamily
af_Q2G161_32_508_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.905 31 513 1.20.1730.10
af_Q9W3R0_60_567_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8753 36 515 1.20.1730.10
af_P83740_46_534_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8711 43 517 1.20.1730.10
af_Q9Y289_54_554_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8706 32 514 1.20.1730.10
af_Q9V9U2_57_565_1.20.1730.10 Mainly Alpha;Up-down Bundle;Sodium/glucose cotransporter;Sodium/glucose cotransporter 0.8681 33 511 1.20.1730.10
ID Description Score Start End GO Terms
AF-A0A519XVJ9-F1-model_v4 Sodium:solute symporter 0.9861 1 347 GO:0005886
GO:0006814
GO:0015293
AF-A0A519V9B7-F1-model_v4 Sodium:solute symporter 0.9857 203 518 GO:0005886
GO:0006814
GO:0015293
AF-A0A519WNG8-F1-model_v4 Sodium:solute symporter 0.9856 143 517 GO:0005886
GO:0006814
GO:0015293
AF-A0A519XVJ9-F1-model_v4 Sodium:solute symporter 0.9833 1 347 GO:0005886
GO:0006814
GO:0015293
AF-A0A519TEQ5-F1-model_v4 Sodium:solute symporter 0.9792 211 515 GO:0005886
GO:0006814
GO:0015293

Map