F422012

General Info

Members Datasets Scaffolds Average Seq Length
360 227 720 422

Family's Representative Sequence

Representative Sequence 3300049579|Ga0501043_0047403|Ga0501043_0047403_903_2285
Length 460
Sequence MDIHRCSILARTPASGRSKAREQVVRRRRVPTPSVNLRRMEPLDSLYRWSERARDRARVGTFFRFLARRFLEDNLFQAAGALAYTTVFALVPLSMVVFGVLSAFPVFGEWSDRLSDYIFSNFVPSAARSVEAYLKQFSANAGQLTAAGVIALVVSLLITLNGVESAFNRIWRVESARPRIGRFLVYWTVLTLGALMAAASLALSAKFFAMSMFETQAGRTLQTLMLRLSPMTLELLAFAAIYRVVPHRTIHWRHAFAGAALAAVLFEIVKWGISLYLGNFNSYSKIYGTLAFVPIFLLWIYLSWVAILLGASLASSMSEFRYQPVGMRLPLGFEIYGLLRLLARFNEARKQGRGLHSDEIETVEPMLTDALVQQMLAQLNTINVVRRAETGEWLLTRDLDDLSLAELYEACQLRIPVGEAVLPCRDDSLGRSAIAALDELRLPLRELLKRRASSIQADEV

Samples

Sample ID Description Type Environment
1 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
11 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
15 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
16 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
21 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
22 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
23 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
24 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
35 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
38 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
39 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
47 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
48 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
49 3300015689 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A02 Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
52 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
53 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
55 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
56 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
58 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
80 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
81 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
82 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
83 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
93 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
94 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
95 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
96 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
97 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
98 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
99 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
100 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
101 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
102 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
103 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
104 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
105 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
106 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
107 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
108 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
109 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
110 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
111 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
112 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
113 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
114 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
115 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
116 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
117 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
124 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
127 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
128 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
129 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
130 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
131 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
132 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
133 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
139 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
140 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
143 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
144 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
145 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
146 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
147 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
148 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
149 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
150 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
151 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
167 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
168 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
171 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
172 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
173 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
174 2571042365 Lysobacter oryzae DSM 21044 Isolate Rhizosphere
175 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
176 2643221559 Lysobacter sp. Root559 Isolate Unclassified
177 2643221573 Lysobacter sp. Root604 Isolate Unclassified
178 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
179 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
180 2643221586 Lysobacter sp. Root667 Isolate Unclassified
181 2643221593 Lysobacter sp. Root690 Isolate Unclassified
182 2643221612 Lysobacter sp. Root76 Isolate Unclassified
183 2643221695 Lysobacter sp. Root494 Isolate Unclassified
184 2643221720 Lysobacter sp. Root916 Isolate Unclassified
185 2643221727 Lysobacter sp. Root96 Isolate Unclassified
186 2643221728 Lysobacter sp. Root983 Isolate Unclassified
187 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
188 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
189 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
190 2818991457 Xanthomonas translucens 569 Isolate Unclassified
191 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
192 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
193 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
194 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
195 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
196 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
197 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
198 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
199 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
200 2895522137 Pseudoxanthomonas sp. SGNA-20 Isolate Rhizosphere
201 2895525241 Pseudoxanthomonas sp. SGT-18 Isolate Rhizosphere
202 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
203 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
204 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
205 2919513703 Luteimonas sp. 3794 Isolate Unclassified
206 2919675420 Luteimonas terrae 4099 Isolate Unclassified
207 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
208 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
209 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
210 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
211 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
212 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
213 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
214 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
215 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
216 2941489479 Lysobacter enzymogenes 2943 Isolate Rhizosphere
217 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
218 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
219 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
220 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
221 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
222 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
223 2995948881 Lysobacter enzymogenes B25 Isolate Unclassified
224 8003014200 Lysobacter changpingensis Cm-3-T8 Isolate Rhizosphere
225 8021622325 Xanthomonas sp. LMG12462 Isolate Rhizosphere
226 8021626552 Xanthomonas sp. LMG12460 Isolate Rhizosphere
227 8021648035 Xanthomonas sp. LMG 12461 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.72
Metatranscriptomes 0
Isolates 15.28

Biome Distribution

Category Percentage (%)
Aerial Root 0.28
Bulb 0
Endosphere 22.78
Nodule 0.28
Rhizoplane 4.44
Rhizosphere 50
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501043_0047403 3300049579 Bacteria 3379
2 SwRhRL2b_contig_306729 2162886007 Bacteria 6017
3 JGI25152J39213_1000480 3300002773 Bacteria 22834
4 JGI25150J39212_1000356 3300002774 Bacteria 22473
5 JGI25151J46595_10000676 3300003187 Bacteria 28829
6 JGI25151J46595_10000924 3300003187 Bacteria 22834
7 JGI25153J46596_10000050 3300003215 Bacteria 140710
8 rootH2_10006116 3300003320 Bacteria 8636
9 rootL2_10075523 3300003322 Bacteria 4393
10 rootH1_10110243 3300003323 Bacteria 1856
11 Ga0055526_1000124 3300003771 Bacteria 68139
12 Ga0055526_1001480 3300003771 Bacteria 16662
13 Ga0055537_1000351 3300003773 Bacteria 31332
14 Ga0055537_1000372 3300003773 Bacteria 30610
15 Ga0055524_1000188 3300003775 Bacteria 68244
16 Ga0055524_1003485 3300003775 Bacteria 7626
17 Ga0055524_1007304 3300003775 Bacteria 4713
18 Ga0055536_1002006 3300003781 Bacteria 11675
19 Ga0055536_1002108 3300003781 Bacteria 11321
20 Ga0055536_1002405 3300003781 Bacteria 10528
21 Ga0055536_1002508 3300003781 Bacteria 10297
22 Ga0055536_1002916 3300003781 Bacteria 9394
23 Ga0055536_1004701 3300003781 Bacteria 6879
24 Ga0055534_1000108 3300003784 Bacteria 61496
25 Ga0055534_1000252 3300003784 Bacteria 37490
26 Ga0055528_1000102 3300003790 Bacteria 68139
27 Ga0055528_1000804 3300003790 Bacteria 21689
28 Ga0055530_10002600 3300003791 Bacteria 11395
29 Ga0055530_10002696 3300003791 Bacteria 11053
30 Ga0055530_10002710 3300003791 Bacteria 11018
31 Ga0055531_10002096 3300003794 Bacteria 13693
32 Ga0055531_10002569 3300003794 Bacteria 12052
33 Ga0055531_10002957 3300003794 Bacteria 11050
34 Ga0055531_10006011 3300003794 Bacteria 6967
35 Ga0055531_10006507 3300003794 Bacteria 6622
36 Ga0055531_10009257 3300003794 Bacteria 5062
37 Ga0055531_10017375 3300003794 Bacteria 3041
38 Ga0058692_1000032 3300003856 Bacteria 179581
39 Ga0058692_1000107 3300003856 Bacteria 55344
40 Ga0065704_10024909 3300005289 Bacteria 1676
41 Ga0065704_10071251 3300005289 Bacteria 12240
42 Ga0065704_10135262 3300005289 Bacteria 1579
43 Ga0065715_10006744 3300005293 Bacteria 3990
44 Ga0065715_10033581 3300005293 Bacteria 1948
45 Ga0065715_10095526 3300005293 Bacteria 4047
46 Ga0070670_100005259 3300005331 Bacteria 10902
47 Ga0070670_100082663 3300005331 Bacteria 2760
48 Ga0070668_100003799 3300005347 Bacteria 11163
49 Ga0070668_100009343 3300005347 Bacteria 7274
50 Ga0070668_100036257 3300005347 Bacteria 3763
51 Ga0070669_100095616 3300005353 Bacteria 2234
52 Ga0070675_100171704 3300005354 Bacteria 1870
53 Ga0070671_100049682 3300005355 Bacteria 3489
54 Ga0070673_100081076 3300005364 Bacteria 2630
55 Ga0070714_100112845 3300005435 Bacteria 2409
56 Ga0070678_100088528 3300005456 Bacteria 2367
57 Ga0070679_100062647 3300005530 Bacteria 3708
58 Ga0070672_100077747 3300005543 Bacteria 2654
59 Ga0075365_10076415 3300006038 Bacteria 2261
60 Ga0075364_10000625 3300006051 Bacteria 18201
61 Ga0075364_10092740 3300006051 Bacteria 2005
62 Ga0068865_100210348 3300006881 Bacteria 1515
63 Ga0105251_10004731 3300009011 Bacteria 9126
64 Ga0105244_10035643 3300009036 Bacteria 2613
65 Ga0105243_10014993 3300009148 Bacteria 5867
66 Ga0105243_10023660 3300009148 Bacteria 4681
67 Ga0105243_10075046 3300009148 Bacteria 2744
68 Ga0105148_101624 3300009978 Bacteria 1571
69 Ga0105032_100478 3300009979 Bacteria 4001
70 Ga0105028_102622 3300009993 Bacteria 1881
71 Ga0157370_10004159 3300013104 Bacteria 16748
72 Ga0157370_10109925 3300013104 Bacteria 2577
73 Ga0157369_10059371 3300013105 Bacteria 4124
74 Ga0163162_10083023 3300013306 Bacteria 3277
75 Ga0157372_10276047 3300013307 Bacteria 1954
76 Ga0157375_10102955 3300013308 Bacteria 2941
77 Ga0157375_10283989 3300013308 Bacteria 1818
78 Ga0182008_10002252 3300014497 Bacteria 12194
79 Ga0182008_10017640 3300014497 Bacteria 3701
80 Ga0182006_1028489 3300015261 Bacteria 2270
81 Ga0182007_10000173 3300015262 Bacteria 43981
82 Ga0182005_1000468 3300015265 Bacteria 20958
83 Ga0183360_10001 3300015689 Bacteria 3943671
84 Ga0163161_10006943 3300017792 Bacteria 7827
85 Ga0163161_10014391 3300017792 Bacteria 5508
86 Ga0163161_10038375 3300017792 Bacteria 3435
87 Ga0163161_10043428 3300017792 Bacteria 3236
88 Ga0207425_1000117 3300025245 Bacteria 74911
89 Ga0209129_1000011 3300025258 Bacteria 568657
90 Ga0209565_1000001 3300025263 Bacteria 2950419
91 Ga0209565_1000274 3300025263 Bacteria 52312
92 Ga0209673_1000001 3300025273 Bacteria 3176258
93 Ga0209673_1001264 3300025273 Bacteria 26004
94 Ga0209675_1000001 3300025291 Bacteria 2950293
95 Ga0209675_1000015 3300025291 Bacteria 403517
96 Ga0209676_1000436 3300025292 Bacteria 72143
97 Ga0209676_1000594 3300025292 Bacteria 53972
98 Ga0209676_1000781 3300025292 Bacteria 42548
99 Ga0209676_1001136 3300025292 Bacteria 29134
100 Ga0209676_1001557 3300025292 Bacteria 20542
101 Ga0209676_1001981 3300025292 Bacteria 16305
102 Ga0209676_1002305 3300025292 Bacteria 13899
103 Ga0209676_1002844 3300025292 Bacteria 11437
104 Ga0209025_1000002 3300025294 Bacteria 1393142
105 Ga0209025_1000006 3300025294 Bacteria 1153444
106 Ga0209025_1000564 3300025294 Bacteria 67936
107 Ga0209025_1012077 3300025294 Bacteria 5591
108 Ga0209564_1000001 3300025295 Bacteria 3176258
109 Ga0209564_1000037 3300025295 Bacteria 414794
110 Ga0209758_1000003 3300025297 Bacteria 1398533
111 Ga0209050_1000147 3300025298 Bacteria 164512
112 Ga0209050_1000328 3300025298 Bacteria 94963
113 Ga0209050_1003158 3300025298 Bacteria 12545
114 Ga0209050_1008060 3300025298 Bacteria 5725
115 Ga0209050_1013373 3300025298 Bacteria 3651
116 Ga0209256_1000006 3300025299 Bacteria 1250310
117 Ga0209256_1001805 3300025299 Bacteria 20160
118 Ga0209256_1005442 3300025299 Bacteria 7331
119 Ga0209051_1002291 3300025303 Bacteria 13971
120 Ga0209051_1003931 3300025303 Bacteria 9469
121 Ga0209257_1000086 3300025304 Bacteria 287437
122 Ga0209257_1000343 3300025304 Bacteria 96876
123 Ga0209257_1000567 3300025304 Bacteria 62634
124 Ga0209257_1000655 3300025304 Bacteria 54777
125 Ga0209257_1000738 3300025304 Bacteria 49567
126 Ga0209257_1000788 3300025304 Bacteria 46352
127 Ga0209257_1002327 3300025304 Bacteria 19162
128 Ga0209257_1003212 3300025304 Bacteria 14433
129 Ga0209257_1004204 3300025304 Bacteria 11420
130 Ga0209257_1009668 3300025304 Bacteria 5095
131 Ga0207713_1007926 3300025735 Bacteria 6189
132 Ga0207657_10041691 3300025919 Bacteria 4057
133 Ga0207649_10043096 3300025920 Bacteria 2757
134 Ga0207650_10013553 3300025925 Bacteria 5648
135 Ga0207650_10031331 3300025925 Bacteria 3839
136 Ga0207659_10051833 3300025926 Bacteria 2921
137 Ga0207664_10257801 3300025929 Bacteria 1524
138 Ga0207709_10000579 3300025935 Bacteria 30727
139 Ga0207704_10116781 3300025938 Bacteria 1816
140 Ga0207691_10008799 3300025940 Bacteria 9681
141 Ga0209371_1000028 3300027312 Bacteria 429688
142 Ga0209371_1000055 3300027312 Bacteria 257599
143 Ga0209999_1003626 3300027543 Bacteria 2764
144 Ga0209982_1006795 3300027552 Bacteria 1668
145 Ga0209983_1003185 3300027665 Bacteria 3520
146 Ga0209971_1007557 3300027682 Bacteria 2579
147 Ga0209974_10019746 3300027876 Bacteria 2234
148 Ga0209974_10039492 3300027876 Bacteria 1570
149 Ga0268256_1000030 3300030500 Bacteria 429688
150 Ga0268256_1000054 3300030500 Bacteria 257599
151 Ga0316177_1050522 3300030731 Bacteria 5351
152 Ga0314311_1091140 3300030733 Bacteria 3380
153 Ga0316178_1019494 3300030735 Bacteria 2234
154 Ga0316181_1017997 3300030744 Bacteria 6507
155 Ga0307513_10003461 3300031456 Bacteria 21352
156 Ga0307405_10086233 3300031731 Bacteria 2066
157 Ga0307413_10006589 3300031824 Bacteria 5319
158 Ga0307413_10010590 3300031824 Bacteria 4484
159 Ga0307413_10056601 3300031824 Bacteria 2392
160 Ga0307410_10089777 3300031852 Bacteria 2178
161 Ga0307410_10103188 3300031852 Bacteria 2048
162 Ga0307406_10005847 3300031901 Bacteria 6743
163 Ga0307412_10036933 3300031911 Bacteria 3134
164 Ga0307412_10041527 3300031911 Bacteria 2982
165 Ga0307412_10154442 3300031911 Bacteria 1697
166 Ga0307414_10002922 3300032004 Bacteria 9035
167 Ga0307414_10003248 3300032004 Bacteria 8660
168 Ga0307414_10008788 3300032004 Bacteria 5761
169 Ga0307414_10009848 3300032004 Bacteria 5509
170 Ga0307414_10025371 3300032004 Bacteria 3796
171 Ga0307414_10095781 3300032004 Bacteria 2219
172 Ga0307415_100134066 3300032126 Bacteria 1880
173 Ga0395900_0028616 3300037418 Bacteria 5711
174 Ga0395900_0084594 3300037418 Bacteria 3260
175 Ga0395900_0413810 3300037418 Bacteria 1310
176 Ga0395905_0002340 3300037471 Bacteria 21136
177 Ga0395901_0002043 3300038443 Bacteria 20724
178 Ga0237819_05067 3300038705 Bacteria 2099
179 Ga0237816_00086 3300039145 Bacteria 6647
180 Ga0439436_0010073 3300041404 Bacteria 2888
181 Ga0439436_0016524 3300041404 Bacteria 2213
182 Ga0439436_0021915 3300041404 Bacteria 1895
183 Ga0439436_0034689 3300041404 Bacteria 1459
184 Ga0439439_0009124 3300041406 Bacteria 2353
185 Ga0439447_012207 3300041407 Bacteria 2476
186 Ga0439461_0001183 3300041410 Bacteria 3984
187 Ga0439465_0002728 3300041413 Bacteria 5771
188 Ga0439465_0006252 3300041413 Bacteria 3784
189 Ga0439465_0012453 3300041413 Bacteria 2659
190 Ga0451789_1058285 3300041443 Bacteria 1477
191 Ga0451791_0802924 3300041451 Bacteria 4137
192 Ga0451797_0160888 3300041453 Bacteria 4658
193 Ga0451800_1659866 3300041459 Bacteria 1567
194 Ga0451802_2165626 3300041460 Bacteria 1387
195 Ga0451806_825092 3300041462 Bacteria 1528
196 Ga0451804_0098832 3300041463 Bacteria 1463
197 Ga0451807_2398427 3300041486 Bacteria 1526
198 Ga0451837_0035691 3300041494 Bacteria 3072
199 Ga0451837_1498760 3300041494 Bacteria 3833
200 Ga0451843_1034614 3300041509 Bacteria 1985
201 Ga0451843_1631528 3300041509 Bacteria 1445
202 Ga0451853_3574940 3300041512 Bacteria 1501
203 Ga0439432_019673 3300042006 Bacteria 2248
204 Ga0439449_0004405 3300042007 Bacteria 5429
205 Ga0439449_0007448 3300042007 Bacteria 4162
206 Ga0439449_0023230 3300042007 Bacteria 2319
207 Ga0439450_014353 3300042008 Bacteria 1606
208 Ga0439452_010943 3300042010 Bacteria 2622
209 Ga0439462_0018507 3300042015 Bacteria 1810
210 Ga0453684_0001075 3300044712 Bacteria 86968
211 Ga0451576_0000025 3300045051 Bacteria 427980
212 Ga0495627_021819 3300046453 Bacteria 2116
213 Ga0495638_0002420 3300046460 Bacteria 15249
214 Ga0495638_0051201 3300046460 Bacteria 2576
215 Ga0495610_0001467 3300046512 Bacteria 20805
216 Ga0495631_0001602 3300046518 Bacteria 13536
217 Ga0495643_0001732 3300046522 Bacteria 18841
218 Ga0495663_0002180 3300046525 Bacteria 5963
219 Ga0495663_0042724 3300046525 Bacteria 1382
220 Ga0495598_0001988 3300046537 Bacteria 4157
221 Ga0495621_0000891 3300046539 Bacteria 7614
222 Ga0495656_0004162 3300046615 Bacteria 4933
223 Ga0495668_0001130 3300046616 Bacteria 27356
224 Ga0495625_0090420 3300046660 Bacteria 2117
225 Ga0495659_0045581 3300046664 Bacteria 1580
226 Ga0495671_0008714 3300046692 Bacteria 5697
227 Ga0495660_0024885 3300046810 Bacteria 3405
228 Ga0495636_0001221 3300047318 Bacteria 9710
229 Ga0495672_0000792 3300047320 Bacteria 34270
230 Ga0495686_0026337 3300047472 Bacteria 3804
231 Ga0495686_0073531 3300047472 Bacteria 2099
232 Ga0496101_0047771 3300048904 Bacteria 3074
233 Ga0496107_0071733 3300048910 Bacteria 2517
234 Ga0496108_0029003 3300048911 Bacteria 4579
235 Ga0496108_0091722 3300048911 Bacteria 2582
236 Ga0496109_0031443 3300048912 Bacteria 4763
237 Ga0496112_0292127 3300048915 Bacteria 1576
238 Ga0496113_0175915 3300048916 Bacteria 1696
239 Ga0496114_0007208 3300048917 Bacteria 8778
240 Ga0496116_0001249 3300048919 Bacteria 29528
241 Ga0496117_0003368 3300048920 Bacteria 18629
242 Ga0496117_0004014 3300048920 Bacteria 16599
243 Ga0496117_0004363 3300048920 Bacteria 15693
244 Ga0496118_0001509 3300048921 Bacteria 34684
245 Ga0496118_0002520 3300048921 Bacteria 24587
246 Ga0496118_0013515 3300048921 Bacteria 7712
247 Ga0496119_0001171 3300048922 Bacteria 32847
248 Ga0496119_0002089 3300048922 Bacteria 22562
249 Ga0496120_0000480 3300048923 Bacteria 62598
250 Ga0496120_0000537 3300048923 Bacteria 58209
251 Ga0496121_0002935 3300048924 Bacteria 24926
252 Ga0496121_0006901 3300048924 Bacteria 13856
253 Ga0496121_0025182 3300048924 Bacteria 5658
254 Ga0496122_0000859 3300048925 Bacteria 57207
255 Ga0496122_0000903 3300048925 Bacteria 54843
256 Ga0496122_0033139 3300048925 Bacteria 4256
257 Ga0496122_0042536 3300048925 Bacteria 3572
258 Ga0496122_0167881 3300048925 Bacteria 1327
259 Ga0496123_0000417 3300048926 Bacteria 77334
260 Ga0496123_0000702 3300048926 Bacteria 54737
261 Ga0496123_0006439 3300048926 Bacteria 11374
262 Ga0496123_0008015 3300048926 Bacteria 9785
263 Ga0496123_0030464 3300048926 Bacteria 3949
264 Ga0496124_0000653 3300048927 Bacteria 57229
265 Ga0496124_0001664 3300048927 Bacteria 31677
266 Ga0496124_0013690 3300048927 Bacteria 7902
267 Ga0496124_0014723 3300048927 Bacteria 7548
268 Ga0496124_0016287 3300048927 Bacteria 7079
269 Ga0496124_0016830 3300048927 Bacteria 6930
270 Ga0496125_0009651 3300048928 Bacteria 9866
271 Ga0496125_0010770 3300048928 Bacteria 9210
272 Ga0496125_0011102 3300048928 Bacteria 9035
273 Ga0496125_0024593 3300048928 Bacteria 5534
274 Ga0496125_0053497 3300048928 Bacteria 3308
275 Ga0496126_0002009 3300048929 Bacteria 28764
276 Ga0496126_0011689 3300048929 Bacteria 9053
277 Ga0496126_0058265 3300048929 Bacteria 3482
278 Ga0496126_0087184 3300048929 Bacteria 2750
279 Ga0501031_0032847 3300049568 Bacteria 3384
280 Ga0501032_0005929 3300049569 Bacteria 9025
281 Ga0501033_0003114 3300049570 Bacteria 13771
282 Ga0501034_0000636 3300049571 Bacteria 54505
283 Ga0501034_0001777 3300049571 Bacteria 27560
284 Ga0501034_0038564 3300049571 Bacteria 4837
285 Ga0501034_0054050 3300049571 Bacteria 4043
286 Ga0501034_0216191 3300049571 Bacteria 1870
287 Ga0501036_0072553 3300049572 Bacteria 2910
288 Ga0501037_0003917 3300049573 Bacteria 10799
289 Ga0501038_0005610 3300049574 Bacteria 11648
290 Ga0501038_0032174 3300049574 Bacteria 4629
291 Ga0501039_0028769 3300049575 Bacteria 4279
292 Ga0501043_0039977 3300049579 Bacteria 3686
293 Ga0501047_0062767 3300049581 Bacteria 3584
294 Ga0501047_0222592 3300049581 Bacteria 1743
295 Ga0501070_0065684 3300049586 Bacteria 3004
296 Ga0501071_0171727 3300049587 Bacteria 1623
297 Ga0501249_008506 3300049679 Bacteria 2130
298 Ga0501080_0033451 3300049742 Bacteria 4798
299 Ga0501266_004882 3300049763 Bacteria 1669
300 Ga0501044_0009841 3300049823 Bacteria 10392
301 Ga0501044_0094971 3300049823 Bacteria 3005
302 nmdc:mga00v17_39406_c1 3300050491 Bacteria 2830
303 nmdc:mga00v17_489_c1 3300050491 Bacteria 22233
304 nmdc:mga0yw44_69228_c1 3300050492 Bacteria 2185
305 Ga0500634_0017737 3300053161 Bacteria 3814
306 2547502341 2547132130 Bacteria 4660562
307 2572254535 2571042365 Bacteria 3289345
308 2578459562 2576861471 Bacteria 4648976
309 2643815619 2643221559 Bacteria 4424915
310 2643882129 2643221573 Bacteria 4784121
311 2643907294 2643221579 Bacteria 4443405
312 2643915195 2643221581 Bacteria 3893603
313 2643938240 2643221586 Bacteria 4446529
314 2643976374 2643221593 Bacteria 6296053
315 2644079842 2643221612 Bacteria 4361984
316 2644528407 2643221695 Bacteria 3441323
317 2644663163 2643221720 Bacteria 4694283
318 2644696007 2643221727 Bacteria 4415595
319 2644699675 2643221728 Bacteria 4797149
320 2747950392 2747842428 Bacteria 4689383
321 2765577746 2765235840 Bacteria 4663337
322 2816519518 2816332141 Bacteria 4436036
323 2819662743 2818991457 Bacteria 5323295
324 2842395397 2842391507 Bacteria 4486072
325 2842759705 2842757796 Bacteria 3981385
326 2852653065 2852649853 Bacteria 4036942
327 2852687517 2852684882 Bacteria 5463342
328 2857445048 2857442823 Bacteria 4562550
329 2874220347 2874220319 Bacteria 4594709
330 2894414471 2894414249 Bacteria 4405451
331 2895501332 2895498888 Bacteria 5283788
332 2895514475 2895511927 Bacteria 6802080
333 2895524043 2895522137 Bacteria 3284416
334 2895527531 2895525241 Bacteria 3388457
335 2919091617 2919089067 Bacteria 4560942
336 2919134300 2919130084 Bacteria 5301837
337 2919134971 2919134579 Bacteria 4480386
338 2919515129 2919513703 Bacteria 3844312
339 2919676247 2919675420 Bacteria 3969095
340 2923519265 2923516293 Bacteria 3716336
341 2928498437 2928496128 Bacteria 4631123
342 2929198955 2929195423 Bacteria 5325372
343 2931381997 2931380184 Bacteria 4455911
344 2937611242 2937610967 Bacteria 4618818
345 2939591824 2939589442 Bacteria 4214238
346 2939626183 2939622612 Bacteria 4698046
347 2939630114 2939626828 Bacteria 4695272
348 2941477315 2941475908 Bacteria 4145589
349 2941494061 2941489479 Bacteria 6313767
350 2961047112 2961047084 Bacteria 4594415
351 2961068482 2961064222 Bacteria 4749990
352 2974310011 2974307012 Bacteria 4172388
353 2977250746 2977247770 Bacteria 4160543
354 2984514769 2984514374 Bacteria 4172479
355 2987607981 2987605356 Bacteria 4187822
356 2995950320 2995948881 Bacteria 6358104
357 8003015040 8003014200 Bacteria 4059994
358 8021625152 8021622325 Bacteria 4844743
359 8021627980 8021626552 Bacteria 4665214
360 8021648413 8021648035 Bacteria 4772378
361 Ga0501043_0047403
362 SwRhRL2b_contig_306729
363 JGI25152J39213_1000480
364 JGI25150J39212_1000356
365 JGI25151J46595_10000676
366 JGI25151J46595_10000924
367 JGI25153J46596_10000050
368 rootH2_10006116
369 rootL2_10075523
370 rootH1_10110243
371 Ga0055526_1000124
372 Ga0055526_1001480
373 Ga0055537_1000351
374 Ga0055537_1000372
375 Ga0055524_1000188
376 Ga0055524_1003485
377 Ga0055524_1007304
378 Ga0055536_1002006
379 Ga0055536_1002108
380 Ga0055536_1002405
381 Ga0055536_1002508
382 Ga0055536_1002916
383 Ga0055536_1004701
384 Ga0055534_1000108
385 Ga0055534_1000252
386 Ga0055528_1000102
387 Ga0055528_1000804
388 Ga0055530_10002600
389 Ga0055530_10002696
390 Ga0055530_10002710
391 Ga0055531_10002096
392 Ga0055531_10002569
393 Ga0055531_10002957
394 Ga0055531_10006011
395 Ga0055531_10006507
396 Ga0055531_10009257
397 Ga0055531_10017375
398 Ga0058692_1000032
399 Ga0058692_1000107
400 Ga0065704_10024909
401 Ga0065704_10071251
402 Ga0065704_10135262
403 Ga0065715_10006744
404 Ga0065715_10033581
405 Ga0065715_10095526
406 Ga0070670_100005259
407 Ga0070670_100082663
408 Ga0070668_100003799
409 Ga0070668_100009343
410 Ga0070668_100036257
411 Ga0070669_100095616
412 Ga0070675_100171704
413 Ga0070671_100049682
414 Ga0070673_100081076
415 Ga0070714_100112845
416 Ga0070678_100088528
417 Ga0070679_100062647
418 Ga0070672_100077747
419 Ga0075365_10076415
420 Ga0075364_10000625
421 Ga0075364_10092740
422 Ga0068865_100210348
423 Ga0105251_10004731
424 Ga0105244_10035643
425 Ga0105243_10014993
426 Ga0105243_10023660
427 Ga0105243_10075046
428 Ga0105148_101624
429 Ga0105032_100478
430 Ga0105028_102622
431 Ga0157370_10004159
432 Ga0157370_10109925
433 Ga0157369_10059371
434 Ga0163162_10083023
435 Ga0157372_10276047
436 Ga0157375_10102955
437 Ga0157375_10283989
438 Ga0182008_10002252
439 Ga0182008_10017640
440 Ga0182006_1028489
441 Ga0182007_10000173
442 Ga0182005_1000468
443 Ga0183360_10001
444 Ga0163161_10006943
445 Ga0163161_10014391
446 Ga0163161_10038375
447 Ga0163161_10043428
448 Ga0207425_1000117
449 Ga0209129_1000011
450 Ga0209565_1000001
451 Ga0209565_1000274
452 Ga0209673_1000001
453 Ga0209673_1001264
454 Ga0209675_1000001
455 Ga0209675_1000015
456 Ga0209676_1000436
457 Ga0209676_1000594
458 Ga0209676_1000781
459 Ga0209676_1001136
460 Ga0209676_1001557
461 Ga0209676_1001981
462 Ga0209676_1002305
463 Ga0209676_1002844
464 Ga0209025_1000002
465 Ga0209025_1000006
466 Ga0209025_1000564
467 Ga0209025_1012077
468 Ga0209564_1000001
469 Ga0209564_1000037
470 Ga0209758_1000003
471 Ga0209050_1000147
472 Ga0209050_1000328
473 Ga0209050_1003158
474 Ga0209050_1008060
475 Ga0209050_1013373
476 Ga0209256_1000006
477 Ga0209256_1001805
478 Ga0209256_1005442
479 Ga0209051_1002291
480 Ga0209051_1003931
481 Ga0209257_1000086
482 Ga0209257_1000343
483 Ga0209257_1000567
484 Ga0209257_1000655
485 Ga0209257_1000738
486 Ga0209257_1000788
487 Ga0209257_1002327
488 Ga0209257_1003212
489 Ga0209257_1004204
490 Ga0209257_1009668
491 Ga0207713_1007926
492 Ga0207657_10041691
493 Ga0207649_10043096
494 Ga0207650_10013553
495 Ga0207650_10031331
496 Ga0207659_10051833
497 Ga0207664_10257801
498 Ga0207709_10000579
499 Ga0207704_10116781
500 Ga0207691_10008799
501 Ga0209371_1000028
502 Ga0209371_1000055
503 Ga0209999_1003626
504 Ga0209982_1006795
505 Ga0209983_1003185
506 Ga0209971_1007557
507 Ga0209974_10019746
508 Ga0209974_10039492
509 Ga0268256_1000030
510 Ga0268256_1000054
511 Ga0316177_1050522
512 Ga0314311_1091140
513 Ga0316178_1019494
514 Ga0316181_1017997
515 Ga0307513_10003461
516 Ga0307405_10086233
517 Ga0307413_10006589
518 Ga0307413_10010590
519 Ga0307413_10056601
520 Ga0307410_10089777
521 Ga0307410_10103188
522 Ga0307406_10005847
523 Ga0307412_10036933
524 Ga0307412_10041527
525 Ga0307412_10154442
526 Ga0307414_10002922
527 Ga0307414_10003248
528 Ga0307414_10008788
529 Ga0307414_10009848
530 Ga0307414_10025371
531 Ga0307414_10095781
532 Ga0307415_100134066
533 Ga0395900_0028616
534 Ga0395900_0084594
535 Ga0395900_0413810
536 Ga0395905_0002340
537 Ga0395901_0002043
538 Ga0237819_05067
539 Ga0237816_00086
540 Ga0439436_0010073
541 Ga0439436_0016524
542 Ga0439436_0021915
543 Ga0439436_0034689
544 Ga0439439_0009124
545 Ga0439447_012207
546 Ga0439461_0001183
547 Ga0439465_0002728
548 Ga0439465_0006252
549 Ga0439465_0012453
550 Ga0451789_1058285
551 Ga0451791_0802924
552 Ga0451797_0160888
553 Ga0451800_1659866
554 Ga0451802_2165626
555 Ga0451806_825092
556 Ga0451804_0098832
557 Ga0451807_2398427
558 Ga0451837_0035691
559 Ga0451837_1498760
560 Ga0451843_1034614
561 Ga0451843_1631528
562 Ga0451853_3574940
563 Ga0439432_019673
564 Ga0439449_0004405
565 Ga0439449_0007448
566 Ga0439449_0023230
567 Ga0439450_014353
568 Ga0439452_010943
569 Ga0439462_0018507
570 Ga0453684_0001075
571 Ga0451576_0000025
572 Ga0495627_021819
573 Ga0495638_0002420
574 Ga0495638_0051201
575 Ga0495610_0001467
576 Ga0495631_0001602
577 Ga0495643_0001732
578 Ga0495663_0002180
579 Ga0495663_0042724
580 Ga0495598_0001988
581 Ga0495621_0000891
582 Ga0495656_0004162
583 Ga0495668_0001130
584 Ga0495625_0090420
585 Ga0495659_0045581
586 Ga0495671_0008714
587 Ga0495660_0024885
588 Ga0495636_0001221
589 Ga0495672_0000792
590 Ga0495686_0026337
591 Ga0495686_0073531
592 Ga0496101_0047771
593 Ga0496107_0071733
594 Ga0496108_0029003
595 Ga0496108_0091722
596 Ga0496109_0031443
597 Ga0496112_0292127
598 Ga0496113_0175915
599 Ga0496114_0007208
600 Ga0496116_0001249
601 Ga0496117_0003368
602 Ga0496117_0004014
603 Ga0496117_0004363
604 Ga0496118_0001509
605 Ga0496118_0002520
606 Ga0496118_0013515
607 Ga0496119_0001171
608 Ga0496119_0002089
609 Ga0496120_0000480
610 Ga0496120_0000537
611 Ga0496121_0002935
612 Ga0496121_0006901
613 Ga0496121_0025182
614 Ga0496122_0000859
615 Ga0496122_0000903
616 Ga0496122_0033139
617 Ga0496122_0042536
618 Ga0496122_0167881
619 Ga0496123_0000417
620 Ga0496123_0000702
621 Ga0496123_0006439
622 Ga0496123_0008015
623 Ga0496123_0030464
624 Ga0496124_0000653
625 Ga0496124_0001664
626 Ga0496124_0013690
627 Ga0496124_0014723
628 Ga0496124_0016287
629 Ga0496124_0016830
630 Ga0496125_0009651
631 Ga0496125_0010770
632 Ga0496125_0011102
633 Ga0496125_0024593
634 Ga0496125_0053497
635 Ga0496126_0002009
636 Ga0496126_0011689
637 Ga0496126_0058265
638 Ga0496126_0087184
639 Ga0501031_0032847
640 Ga0501032_0005929
641 Ga0501033_0003114
642 Ga0501034_0000636
643 Ga0501034_0001777
644 Ga0501034_0038564
645 Ga0501034_0054050
646 Ga0501034_0216191
647 Ga0501036_0072553
648 Ga0501037_0003917
649 Ga0501038_0005610
650 Ga0501038_0032174
651 Ga0501039_0028769
652 Ga0501043_0039977
653 Ga0501047_0062767
654 Ga0501047_0222592
655 Ga0501070_0065684
656 Ga0501071_0171727
657 Ga0501249_008506
658 Ga0501080_0033451
659 Ga0501266_004882
660 Ga0501044_0009841
661 Ga0501044_0094971
662 nmdc:mga00v17_39406_c1
663 nmdc:mga00v17_489_c1
664 nmdc:mga0yw44_69228_c1
665 Ga0500634_0017737
666 2547502341
667 2572254535
668 2578459562
669 2643815619
670 2643882129
671 2643907294
672 2643915195
673 2643938240
674 2643976374
675 2644079842
676 2644528407
677 2644663163
678 2644696007
679 2644699675
680 2747950392
681 2765577746
682 2816519518
683 2819662743
684 2842395397
685 2842759705
686 2852653065
687 2852687517
688 2857445048
689 2874220347
690 2894414471
691 2895501332
692 2895514475
693 2895524043
694 2895527531
695 2919091617
696 2919134300
697 2919134971
698 2919515129
699 2919676247
700 2923519265
701 2928498437
702 2929198955
703 2931381997
704 2937611242
705 2939591824
706 2939626183
707 2939630114
708 2941477315
709 2941494061
710 2961047112
711 2961068482
712 2974310011
713 2977250746
714 2984514769
715 2987607981
716 2995950320
717 8003015040
718 8021625152
719 8021627980
720 8021648413

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03631

Virul_fac_BrkB

Virulence factor BrkB

71

321

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5w1e-assembly1.cif.gz_A pobr in complex with phb 0.8964 282 344
2lnb-assembly1.cif.gz_A solution nmr structure of n-terminal domain (6-74) of human zbp1 protein, northeast structural genomics consortium target hr8174a. 0.8097 278 344
2heo-assembly1.cif.gz_A general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers. 0.7535 285 345
3mq0-assembly1.cif.gz_B crystal structure of agobacterium tumefaciens repressor blcr 0.7514 285 344
2heo-assembly1.cif.gz_A general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers. 0.733 285 345
ID Description Score Start End Superfamily
2lnbA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8097 278 344 1.10.10.10
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8064 280 345 1.10.10.10
af_P77300_3_76_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8028 288 349 1.10.10.10
1cf7A00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7824 284 343 1.10.10.10
af_Q9H171_1_74_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7737 268 346 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A6P0EJT0-F1-model_v4 deleted 0.9651 280 412
AF-A0A6P0EJT0-F1-model_v4 deleted 0.9438 280 412
AF-A0A1G0WX52-F1-model_v4 Uncharacterized protein 0.8776 1 272 GO:0005886
AF-A0A1G0WX52-F1-model_v4 Uncharacterized protein 0.8746 1 272 GO:0005886
AF-A0A3D5AZ22-F1-model_v4 UPF0761 membrane protein DIC36_07605 0.873 7 266 GO:0005886

Map