F423101

General Info

Members Datasets Scaffolds Average Seq Length
363 221 724 378

Family's Representative Sequence

Representative Sequence 3300048918|Ga0496115_0065383|Ga0496115_0065383_79_1440
Length 453
Sequence MPSFGRLRGSLVDATGAARVVARRLRDDGSLARLPKRRRPIHALHDCARLCTFNPNLPINRNAVNSTTDAAVAGKPATPSLAGARRATRLIFLVSGIGMSAWAPMVPYAKARLGLDDAQLGLALLAFGGGSMLSMPFVGWLAHRLGNRTLIVASGLLMCLALPVLAMVTNITELIAVLLYFGVVLGAVDVAMNAHAVDVERLDGGRLMSGFHGLFSVGGLTGAALTSALLAVGVPLTAAASVLAILLAVVVLWLRSDLLDDAPTADTPRKEPMRMPHALAWLLGLLCFVSFLAEGAMLDWSAVFLRDVRGISAASAGFGYAFFSAAMVVGRFSGDRFVGRYGPESAMRIGAALAAAGFLLVACVSGVVMSLVGFVLIGLGASNIVPVMFSAAGRLPNTSPAIAIATVTTLGYVGLLSGPALIGLVAHISSLPMAFAGVAGLLVLVSFSARIVK

Samples

Sample ID Description Type Environment
1 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
14 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
15 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
16 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
17 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
18 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
19 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
20 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
21 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
52 3300015687 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 002.1_G08 Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
59 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
66 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
67 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
94 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
97 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
98 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
102 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
103 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
104 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
105 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
106 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
107 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
108 3300044536 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA2E Metagenome Unclassified
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
118 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
119 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
120 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
121 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
122 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
123 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
124 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
125 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
126 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
127 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
128 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
129 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
130 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
131 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
132 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
133 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
134 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
137 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
138 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
139 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
142 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
143 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
144 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
145 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
146 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
147 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
148 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
149 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
161 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
162 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
167 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
177 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
178 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
180 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
181 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
182 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
183 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
184 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
185 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
186 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
187 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
188 2593339239 Luteibacter sp. UNCMF331Sha3.1 Isolate Unclassified
189 2599185188 Pseudomonas sp. NFACC45 Isolate Rhizoplane
190 2599185300 Pseudomonas sp. NFACC39-1 Isolate Rhizoplane
191 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
192 2599185319 Pseudomonas sp. NFACC24-1 Isolate Rhizoplane
193 2599185323 Pseudomonas sp. NFACC37-1 Isolate Rhizoplane
194 2600255283 Pseudomonas sp. NFR16 Isolate Rhizoplane
195 2639762793 Acinetobacter calcoaceticus GK1 Isolate Rhizosphere
196 2671180115 Cedecea sp. NFIX57 Isolate Rhizoplane
197 2675903507 Acinetobacter calcoaceticus GK2 Isolate Unclassified
198 2718218334 Luteibacter rhizovicinus LJ96 Isolate Rhizosphere
199 2734482264 Dyella sp. AD052 Isolate Unclassified
200 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
201 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
202 2739367700 Dyella sp. YR388 Isolate Unclassified
203 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
204 2773857761 Acinetobacter sp. 3664 Isolate Unclassified
205 2773857770 Acinetobacter sp. 3636 Isolate Unclassified
206 2811995292 Kosakonia oryzae Ola 51 Isolate Unclassified
207 2842914999 Luteibacter sp. R-72151 Isolate Unclassified
208 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
209 2884411467 Dyella sp. AD56 Isolate Rhizosphere
210 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
211 2904463128 Luteibacter yeojuensis 3191 Isolate Unclassified
212 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
213 2919085039 Luteibacter sp. 1214 Isolate Unclassified
214 2919182534 Acinetobacter calcoaceticus 2589 Isolate Rhizosphere
215 2928963466 Dyella japonica 1073 Isolate Unclassified
216 2941471342 Luteibacter sp. 621 Isolate Unclassified
217 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
218 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
219 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
220 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
221 8033232454 Acinetobacter radioresistens SA188 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.53
Metatranscriptomes 0
Isolates 10.47

Biome Distribution

Category Percentage (%)
Aerial Root 0.55
Bulb 0
Endosphere 12.4
Nodule 0
Rhizoplane 3.58
Rhizosphere 65.56
Stem 0
Stem Tuber 0
Unclassified 0.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496115_0065383 3300048918 Bacteria 2937
2 SwRhRL2b_contig_1505865 2162886007 Bacteria 1513
3 JGI25156J39149_1001117 3300002705 Bacteria 12172
4 JGI25162J39368_1001112 3300002737 Bacteria 16257
5 JGI25157J39369_1001575 3300002741 Bacteria 8064
6 JGI25157J39369_1004690 3300002741 Bacteria 2403
7 JGI25164J39214_1000331 3300002772 Bacteria 30265
8 JGI25165J46597_1000158 3300003214 Bacteria 108257
9 JGI25153J46596_10016088 3300003215 Bacteria 3016
10 rootH2_10000949 3300003320 Bacteria 34993
11 rootH2_10079181 3300003320 Bacteria 3164
12 rootL2_10053336 3300003322 Bacteria 4591
13 rootH1_10028443 3300003323 Bacteria 5010
14 JGI25160J50197_1000982 3300003354 Bacteria 14835
15 Ga0055532_1000633 3300003758 Bacteria 13698
16 Ga0055527_1000507 3300003760 Bacteria 13615
17 Ga0055535_1000395 3300003761 Bacteria 41210
18 Ga0055535_1000657 3300003761 Bacteria 27351
19 Ga0055535_1001278 3300003761 Bacteria 13698
20 Ga0055542_1000167 3300003762 Bacteria 83068
21 Ga0055542_1000199 3300003762 Bacteria 74029
22 Ga0055542_1000657 3300003762 Bacteria 28386
23 Ga0055542_1001268 3300003762 Bacteria 13698
24 Ga0055529_1000593 3300003763 Bacteria 28386
25 Ga0055529_1001003 3300003763 Bacteria 13698
26 Ga0058692_1000027 3300003856 Bacteria 198745
27 Ga0058692_1002522 3300003856 Bacteria 6085
28 Ga0065703_1000536 3300005272 Bacteria 8805
29 Ga0065714_10079680 3300005288 Bacteria 2495
30 Ga0065704_10001599 3300005289 Bacteria 8506
31 Ga0070680_100134893 3300005336 Bacteria 2067
32 Ga0070660_100021518 3300005339 Bacteria 4758
33 Ga0070660_100081988 3300005339 Bacteria 2532
34 Ga0070689_100016245 3300005340 Bacteria 5444
35 Ga0070669_100009568 3300005353 Bacteria 6902
36 Ga0070659_100004284 3300005366 Bacteria 10186
37 Ga0070659_100077208 3300005366 Bacteria 2656
38 Ga0070663_100037885 3300005455 Bacteria 3359
39 Ga0070662_100055302 3300005457 Bacteria 2879
40 Ga0070681_10006208 3300005458 Bacteria 11616
41 Ga0070681_10007670 3300005458 Bacteria 10552
42 Ga0070681_10189599 3300005458 Bacteria 1976
43 Ga0068853_100111126 3300005539 Bacteria 2434
44 Ga0070696_100009351 3300005546 Bacteria 6561
45 Ga0068855_100053179 3300005563 Bacteria 4765
46 Ga0068857_100251442 3300005577 Bacteria 1620
47 Ga0075364_10188952 3300006051 Bacteria 1395
48 Ga0105251_10000078 3300009011 Bacteria 93496
49 Ga0105251_10000338 3300009011 Bacteria 46948
50 Ga0105251_10002207 3300009011 Bacteria 15558
51 Ga0105244_10003132 3300009036 Bacteria 12049
52 Ga0105244_10021863 3300009036 Bacteria 3527
53 Ga0105244_10029724 3300009036 Bacteria 2915
54 Ga0105244_10080470 3300009036 Bacteria 1613
55 Ga0105244_10080586 3300009036 Bacteria 1612
56 Ga0105250_10019253 3300009092 Bacteria 2759
57 Ga0105247_10001014 3300009101 Bacteria 21177
58 Ga0105247_10001470 3300009101 Bacteria 16980
59 Ga0105243_10000004 3300009148 Bacteria 601266
60 Ga0105243_10000123 3300009148 Bacteria 88281
61 Ga0105237_10000348 3300009545 Bacteria 65042
62 Ga0105238_10003223 3300009551 Bacteria 16306
63 Ga0105239_10094849 3300010375 Bacteria 3296
64 Ga0157373_10029876 3300013100 Bacteria 3924
65 Ga0157373_10190127 3300013100 Bacteria 1447
66 Ga0157371_10005283 3300013102 Bacteria 10942
67 Ga0157371_10042376 3300013102 Bacteria 3244
68 Ga0157371_10163060 3300013102 Bacteria 1592
69 Ga0157370_10007392 3300013104 Bacteria 11967
70 Ga0157370_10034402 3300013104 Bacteria 4935
71 Ga0157370_10044760 3300013104 Bacteria 4250
72 Ga0157369_10000346 3300013105 Bacteria 61571
73 Ga0157369_10010977 3300013105 Bacteria 10311
74 Ga0157372_10274437 3300013307 Bacteria 1960
75 Ga0182008_10038078 3300014497 Bacteria 2405
76 Ga0182006_1000057 3300015261 Bacteria 168707
77 Ga0182007_10013522 3300015262 Bacteria 3109
78 Ga0182007_10014849 3300015262 Bacteria 2922
79 Ga0182007_10030566 3300015262 Bacteria 1839
80 Ga0182005_1000194 3300015265 Bacteria 41181
81 Ga0182005_1007511 3300015265 Bacteria 3266
82 Ga0183368_1004 3300015687 Bacteria 1211761
83 Ga0163161_10007045 3300017792 Bacteria 7779
84 Ga0213876_10000419 3300021384 Bacteria 35397
85 Ga0209674_101673 3300025226 Bacteria 5497
86 Ga0209672_100194 3300025228 Bacteria 49055
87 Ga0209672_100198 3300025228 Bacteria 47906
88 Ga0209672_100585 3300025228 Bacteria 19366
89 Ga0209147_100260 3300025229 Bacteria 49055
90 Ga0207427_100036 3300025231 Bacteria 309540
91 Ga0209437_100106 3300025233 Bacteria 219071
92 Ga0209437_100127 3300025233 Bacteria 190741
93 Ga0209258_100035 3300025242 Bacteria 430864
94 Ga0209258_100256 3300025242 Bacteria 93548
95 Ga0209258_100428 3300025242 Bacteria 49055
96 Ga0209646_1001092 3300025246 Bacteria 8072
97 Ga0209646_1002135 3300025246 Bacteria 4592
98 Ga0209026_1000051 3300025250 Bacteria 250792
99 Ga0209026_1000162 3300025250 Bacteria 102867
100 Ga0209026_1001174 3300025250 Bacteria 12151
101 Ga0209148_1000002 3300025254 Bacteria 2399500
102 Ga0209148_1000045 3300025254 Bacteria 448076
103 Ga0209148_1000048 3300025254 Bacteria 430913
104 Ga0209148_1000412 3300025254 Bacteria 49055
105 Ga0209759_1000670 3300025256 Bacteria 31566
106 Ga0209759_1002068 3300025256 Bacteria 9404
107 Ga0209759_1002548 3300025256 Bacteria 7913
108 Ga0209129_1003850 3300025258 Bacteria 6255
109 Ga0209233_1000101 3300025261 Bacteria 286063
110 Ga0209233_1009273 3300025261 Bacteria 3003
111 Ga0209455_1000035 3300025272 Bacteria 479071
112 Ga0209455_1000261 3300025272 Bacteria 60720
113 Ga0209455_1000312 3300025272 Bacteria 49055
114 Ga0209256_1004482 3300025299 Bacteria 8731
115 Ga0207426_1000203 3300025302 Bacteria 142379
116 Ga0207696_1000795 3300025711 Bacteria 20520
117 Ga0207696_1012484 3300025711 Bacteria 3002
118 Ga0207655_1001617 3300025728 Bacteria 20044
119 Ga0207655_1001838 3300025728 Bacteria 18358
120 Ga0207655_1005434 3300025728 Bacteria 8663
121 Ga0207655_1007829 3300025728 Bacteria 6877
122 Ga0207655_1017436 3300025728 Bacteria 3873
123 Ga0207655_1024803 3300025728 Bacteria 2929
124 Ga0207655_1029873 3300025728 Bacteria 2543
125 Ga0207713_1000058 3300025735 Bacteria 216911
126 Ga0207713_1000060 3300025735 Bacteria 213145
127 Ga0207713_1000485 3300025735 Bacteria 41128
128 Ga0207713_1001516 3300025735 Bacteria 18323
129 Ga0207710_10000057 3300025900 Bacteria 177544
130 Ga0207710_10002576 3300025900 Bacteria 8372
131 Ga0207647_10016730 3300025904 Bacteria 4997
132 Ga0207647_10030617 3300025904 Bacteria 3469
133 Ga0207705_10008184 3300025909 Bacteria 7654
134 Ga0207684_10090651 3300025910 Unclassified 2605
135 Ga0207707_10004987 3300025912 Bacteria 11661
136 Ga0207707_10016960 3300025912 Bacteria 6345
137 Ga0207695_10047595 3300025913 Bacteria 4536
138 Ga0207671_10000167 3300025914 Bacteria 100428
139 Ga0207693_10106976 3300025915 Bacteria 2194
140 Ga0207681_10022664 3300025923 Bacteria 4008
141 Ga0207694_10059680 3300025924 Bacteria 2967
142 Ga0207700_10189470 3300025928 Bacteria 1728
143 Ga0207690_10001237 3300025932 Bacteria 16137
144 Ga0207690_10002935 3300025932 Bacteria 10275
145 Ga0207690_10010567 3300025932 Bacteria 5493
146 Ga0207690_10032437 3300025932 Bacteria 3352
147 Ga0207706_10073169 3300025933 Bacteria 3013
148 Ga0207709_10000010 3300025935 Bacteria 601305
149 Ga0207709_10000057 3300025935 Bacteria 216617
150 Ga0207670_10001797 3300025936 Bacteria 11222
151 Ga0207651_10030284 3300025960 Bacteria 3444
152 Ga0207639_10051338 3300026041 Bacteria 3136
153 Ga0207678_10008509 3300026067 Bacteria 9044
154 Ga0209371_1000074 3300027312 Bacteria 198823
155 Ga0209371_1002534 3300027312 Bacteria 10106
156 Ga0209371_1003066 3300027312 Bacteria 8569
157 Ga0307515_10004057 3300028794 Bacteria 30560
158 Ga0268256_1000067 3300030500 Bacteria 198823
159 Ga0268256_1002752 3300030500 Bacteria 8569
160 Ga0307516_10031471 3300031730 Bacteria 5347
161 Ga0307414_10176834 3300032004 Bacteria 1712
162 Ga0373949_0001118 3300035090 Bacteria 8121
163 Ga0373927_0125838 3300035695 Bacteria 1673
164 Ga0373947_0115163 3300035725 Unclassified 1703
165 Ga0373925_0028208 3300037068 Bacteria 4112
166 Ga0395898_0000078 3300037466 Bacteria 244514
167 Ga0395901_0003377 3300038443 Bacteria 16072
168 Ga0436365_0912825 3300039437 Bacteria 101193
169 Ga0439438_000005 3300041405 Bacteria 408610
170 Ga0439447_003337 3300041407 Bacteria 5711
171 Ga0439466_0012264 3300041411 Bacteria 3161
172 Ga0439432_005162 3300042006 Bacteria 4717
173 Ga0439463_000246 3300042016 Bacteria 14986
174 Ga0466988_0069151 3300044536 Bacteria 2084
175 Ga0466965_0017674 3300044683 Bacteria 3411
176 Ga0466966_0009275 3300044684 Bacteria 6512
177 Ga0466961_0000259 3300044693 Bacteria 35409
178 Ga0466961_0002840 3300044693 Bacteria 10751
179 Ga0466961_0008697 3300044693 Bacteria 6471
180 Ga0466963_0044815 3300044694 Bacteria 2912
181 Ga0466968_0016498 3300044735 Bacteria 2941
182 Ga0466960_0010162 3300044901 Bacteria 3904
183 Ga0466959_0028086 3300045049 Bacteria 4172
184 Ga0466958_0013034 3300045836 Bacteria 4724
185 Ga0466958_0033711 3300045836 Bacteria 3051
186 Ga0495627_006888 3300046453 Bacteria 4418
187 Ga0495591_000323 3300046458 Bacteria 43207
188 Ga0495591_003943 3300046458 Bacteria 7447
189 Ga0495638_0000007 3300046460 Bacteria 602783
190 Ga0495638_0001225 3300046460 Bacteria 24307
191 Ga0495650_0000150 3300046471 Bacteria 158574
192 Ga0495650_0003078 3300046471 Bacteria 12518
193 Ga0495605_0000006 3300046474 Bacteria 361304
194 Ga0495605_0001744 3300046474 Bacteria 13927
195 Ga0495605_0003862 3300046474 Bacteria 8892
196 Ga0495584_0002358 3300046491 Bacteria 10759
197 Ga0495585_0000387 3300046492 Bacteria 42449
198 Ga0495585_0003921 3300046492 Bacteria 9852
199 Ga0495596_0001294 3300046500 Bacteria 14460
200 Ga0495607_0000098 3300046501 Bacteria 92012
201 Ga0495607_0000210 3300046501 Bacteria 62298
202 Ga0495607_0002076 3300046501 Bacteria 16733
203 Ga0495607_0009208 3300046501 Bacteria 6711
204 Ga0495607_0011178 3300046501 Bacteria 5993
205 Ga0495607_0013606 3300046501 Bacteria 5327
206 Ga0495607_0022931 3300046501 Bacteria 3913
207 Ga0495607_0073148 3300046501 Bacteria 1906
208 Ga0495607_0088039 3300046501 Bacteria 1688
209 Ga0495583_0000798 3300046506 Bacteria 38957
210 Ga0495583_0000984 3300046506 Bacteria 32650
211 Ga0495583_0001142 3300046506 Bacteria 28911
212 Ga0495583_0001347 3300046506 Bacteria 25452
213 Ga0495583_0008105 3300046506 Bacteria 6472
214 Ga0495606_0000098 3300046507 Bacteria 151131
215 Ga0495606_0002097 3300046507 Bacteria 24278
216 Ga0495606_0002307 3300046507 Bacteria 22484
217 Ga0495606_0068985 3300046507 Bacteria 2235
218 Ga0495610_0003306 3300046512 Bacteria 12676
219 Ga0495610_0028224 3300046512 Bacteria 2970
220 Ga0495616_0059922 3300046513 Bacteria 1870
221 Ga0495620_0000079 3300046515 Bacteria 80460
222 Ga0495620_0000916 3300046515 Bacteria 18120
223 Ga0495620_0000955 3300046515 Bacteria 17780
224 Ga0495631_0000087 3300046518 Bacteria 59740
225 Ga0495631_0000396 3300046518 Bacteria 30084
226 Ga0495631_0008088 3300046518 Bacteria 5314
227 Ga0495632_0000425 3300046519 Bacteria 40092
228 Ga0495632_0000562 3300046519 Bacteria 34537
229 Ga0495632_0007269 3300046519 Bacteria 6982
230 Ga0495632_0007831 3300046519 Bacteria 6649
231 Ga0495637_0000181 3300046520 Bacteria 48899
232 Ga0495637_0000465 3300046520 Bacteria 29588
233 Ga0495637_0017499 3300046520 Bacteria 3338
234 Ga0495637_0038610 3300046520 Bacteria 2066
235 Ga0495644_0000783 3300046523 Bacteria 13069
236 Ga0495648_0010056 3300046524 Bacteria 7250
237 Ga0495648_0038421 3300046524 Bacteria 3061
238 Ga0495663_0001656 3300046525 Bacteria 6938
239 Ga0495654_0056632 3300046530 Bacteria 1894
240 Ga0495609_0000034 3300046538 Bacteria 201125
241 Ga0495609_0000035 3300046538 Bacteria 196269
242 Ga0495609_0004837 3300046538 Bacteria 7263
243 Ga0495622_0006766 3300046557 Bacteria 5318
244 Ga0495622_0015022 3300046557 Bacteria 3599
245 Ga0495668_0019888 3300046616 Bacteria 3864
246 Ga0495611_0000600 3300046648 Bacteria 20775
247 Ga0495625_0000004 3300046660 Bacteria 611314
248 Ga0495625_0034540 3300046660 Bacteria 3730
249 Ga0495661_0000041 3300046665 Bacteria 151138
250 Ga0495661_0000443 3300046665 Bacteria 43820
251 Ga0495661_0000489 3300046665 Bacteria 41447
252 Ga0495661_0041673 3300046665 Bacteria 2838
253 Ga0495671_0005396 3300046692 Bacteria 7492
254 Ga0495671_0043966 3300046692 Bacteria 2240
255 Ga0495660_0013777 3300046810 Bacteria 4686
256 Ga0495660_0015763 3300046810 Bacteria 4363
257 Ga0495676_0000023 3300047321 Bacteria 156478
258 Ga0495683_0075922 3300047323 Bacteria 1645
259 Ga0495679_000256 3300047446 Bacteria 44090
260 Ga0495673_0000001 3300047469 Bacteria 1630730
261 Ga0495673_0000099 3300047469 Bacteria 179978
262 Ga0495673_0000205 3300047469 Bacteria 89721
263 Ga0495673_0000850 3300047469 Bacteria 28391
264 Ga0495673_0008780 3300047469 Bacteria 5644
265 Ga0495673_0016774 3300047469 Bacteria 3734
266 Ga0495681_0002274 3300047470 Bacteria 13804
267 Ga0495686_0000019 3300047472 Bacteria 434054
268 Ga0495686_0000441 3300047472 Bacteria 62859
269 Ga0495686_0076586 3300047472 Bacteria 2049
270 Ga0495626_0000213 3300048091 Bacteria 69180
271 Ga0496101_0005909 3300048904 Bacteria 7838
272 Ga0496102_0173534 3300048905 Bacteria 2030
273 Ga0496106_0010792 3300048909 Bacteria 6753
274 Ga0496114_0206481 3300048917 Bacteria 1722
275 Ga0496115_0000111 3300048918 Bacteria 74766
276 Ga0496116_0002120 3300048919 Bacteria 21123
277 Ga0496117_0039497 3300048920 Bacteria 3483
278 Ga0496118_0005548 3300048921 Bacteria 14299
279 Ga0496118_0006872 3300048921 Bacteria 12326
280 Ga0496118_0062703 3300048921 Bacteria 2741
281 Ga0496121_0000350 3300048924 Bacteria 96129
282 Ga0496121_0000869 3300048924 Bacteria 54594
283 Ga0496121_0001304 3300048924 Bacteria 42843
284 Ga0496121_0013817 3300048924 Bacteria 8642
285 Ga0496121_0079354 3300048924 Bacteria 2606
286 Ga0496122_0003357 3300048925 Bacteria 21098
287 Ga0496122_0011943 3300048925 Bacteria 8716
288 Ga0496122_0044148 3300048925 Bacteria 3483
289 Ga0496122_0117280 3300048925 Bacteria 1728
290 Ga0496123_0000379 3300048926 Bacteria 83366
291 Ga0496123_0002074 3300048926 Bacteria 25807
292 Ga0496123_0006005 3300048926 Bacteria 11942
293 Ga0496123_0050240 3300048926 Bacteria 2788
294 Ga0496124_0000031 3300048927 Bacteria 344232
295 Ga0496124_0004969 3300048927 Bacteria 15213
296 Ga0496124_0008037 3300048927 Bacteria 11091
297 Ga0496125_0015497 3300048928 Bacteria 7367
298 Ga0496126_0015363 3300048929 Bacteria 7702
299 Ga0496126_0055972 3300048929 Bacteria 3566
300 Ga0496126_0090885 3300048929 Bacteria 2685
301 Ga0496126_0101690 3300048929 Bacteria 2514
302 Ga0496126_0224795 3300048929 Bacteria 1575
303 Ga0496126_0302378 3300048929 Bacteria 1319
304 Ga0495678_000120 3300049459 Bacteria 91473
305 Ga0495682_0002319 3300049460 Bacteria 9054
306 Ga0495682_0014714 3300049460 Bacteria 2966
307 Ga0501032_0159654 3300049569 Bacteria 1480
308 Ga0501033_0029712 3300049570 Bacteria 4107
309 Ga0501034_0074663 3300049571 Bacteria 3398
310 Ga0501036_0061881 3300049572 Bacteria 3170
311 Ga0501038_0146761 3300049574 Bacteria 1925
312 Ga0501043_0082920 3300049579 Bacteria 2520
313 Ga0501047_0137165 3300049581 Bacteria 2326
314 Ga0501047_0284483 3300049581 Bacteria 1497
315 Ga0501048_0068649 3300049582 Bacteria 2503
316 Ga0501219_000753 3300049703 Bacteria 4374
317 Ga0501225_0041726 3300049705 Bacteria 1266
318 Ga0501035_0149770 3300049822 Bacteria 2025
319 Ga0501044_0333686 3300049823 Bacteria 1438
320 Ga0501284_00033 3300050005 Bacteria 63455
321 Ga0500556_0017194 3300053104 Bacteria 2262
322 Ga0500642_0003416 3300053130 Bacteria 4803
323 Ga0500645_001257 3300053730 Bacteria 13335
324 Ga0500645_008565 3300053730 Bacteria 3485
325 2552746534 2551306352 Bacteria 3873115
326 2587749251 2585428060 Bacteria 5304711
327 2588446637 2588253712 Bacteria 5403181
328 2590612076 2588254257 Bacteria 5436094
329 2595452571 2593339239 Bacteria 4124669
330 2599501953 2599185188 Bacteria 6164180
331 2599932987 2599185300 Bacteria 6062622
332 2599973137 2599185307 Bacteria 6194719
333 2600043042 2599185319 Bacteria 6637840
334 2600066328 2599185323 Bacteria 6688755
335 2601628003 2600255283 Bacteria 6061572
336 2640733173 2639762793 Bacteria 3943681
337 2671587046 2671180115 Bacteria 5353919
338 2678229879 2675903507 Bacteria 3737791
339 2721027818 2718218334 Bacteria 4765486
340 2735836605 2734482264 Unclassified 5014763
341 2738688659 2738541271 Bacteria 5657310
342 2739265029 2738543016 Bacteria 5657564
343 2739730651 2739367700 Bacteria 4747630
344 2740057798 2739367874 Bacteria 4872888
345 2774391284 2773857761 Bacteria 3837365
346 2774439419 2773857770 Bacteria 3911866
347 2813728884 2811995292 Bacteria 5303342
348 2842916194 2842914999 Bacteria 4419378
349 2884340241 2884338543 Bacteria 4610696
350 2884415107 2884411467 Bacteria 5246714
351 2900638983 2900634093 Bacteria 10263517
352 2904463723 2904463128 Bacteria 4775606
353 2911141792 2911138879 Bacteria 5811561
354 2919085677 2919085039 Bacteria 4532964
355 2919185491 2919182534 Bacteria 3907101
356 2928964284 2928963466 Bacteria 5165703
357 2941473576 2941471342 Bacteria 5018624
358 2984575140 2984572630 Bacteria 4186940
359 2984608593 2984606641 Bacteria 4186971
360 3000377257 3000376612 Bacteria 4705565
361 3007876549 3007872151 Bacteria 5268868
362 8033235289 8033232454 Bacteria 3202805
363 Ga0496115_0065383
364 SwRhRL2b_contig_1505865
365 JGI25156J39149_1001117
366 JGI25162J39368_1001112
367 JGI25157J39369_1001575
368 JGI25157J39369_1004690
369 JGI25164J39214_1000331
370 JGI25165J46597_1000158
371 JGI25153J46596_10016088
372 rootH2_10000949
373 rootH2_10079181
374 rootL2_10053336
375 rootH1_10028443
376 JGI25160J50197_1000982
377 Ga0055532_1000633
378 Ga0055527_1000507
379 Ga0055535_1000395
380 Ga0055535_1000657
381 Ga0055535_1001278
382 Ga0055542_1000167
383 Ga0055542_1000199
384 Ga0055542_1000657
385 Ga0055542_1001268
386 Ga0055529_1000593
387 Ga0055529_1001003
388 Ga0058692_1000027
389 Ga0058692_1002522
390 Ga0065703_1000536
391 Ga0065714_10079680
392 Ga0065704_10001599
393 Ga0070680_100134893
394 Ga0070660_100021518
395 Ga0070660_100081988
396 Ga0070689_100016245
397 Ga0070669_100009568
398 Ga0070659_100004284
399 Ga0070659_100077208
400 Ga0070663_100037885
401 Ga0070662_100055302
402 Ga0070681_10006208
403 Ga0070681_10007670
404 Ga0070681_10189599
405 Ga0068853_100111126
406 Ga0070696_100009351
407 Ga0068855_100053179
408 Ga0068857_100251442
409 Ga0075364_10188952
410 Ga0105251_10000078
411 Ga0105251_10000338
412 Ga0105251_10002207
413 Ga0105244_10003132
414 Ga0105244_10021863
415 Ga0105244_10029724
416 Ga0105244_10080470
417 Ga0105244_10080586
418 Ga0105250_10019253
419 Ga0105247_10001014
420 Ga0105247_10001470
421 Ga0105243_10000004
422 Ga0105243_10000123
423 Ga0105237_10000348
424 Ga0105238_10003223
425 Ga0105239_10094849
426 Ga0157373_10029876
427 Ga0157373_10190127
428 Ga0157371_10005283
429 Ga0157371_10042376
430 Ga0157371_10163060
431 Ga0157370_10007392
432 Ga0157370_10034402
433 Ga0157370_10044760
434 Ga0157369_10000346
435 Ga0157369_10010977
436 Ga0157372_10274437
437 Ga0182008_10038078
438 Ga0182006_1000057
439 Ga0182007_10013522
440 Ga0182007_10014849
441 Ga0182007_10030566
442 Ga0182005_1000194
443 Ga0182005_1007511
444 Ga0183368_1004
445 Ga0163161_10007045
446 Ga0213876_10000419
447 Ga0209674_101673
448 Ga0209672_100194
449 Ga0209672_100198
450 Ga0209672_100585
451 Ga0209147_100260
452 Ga0207427_100036
453 Ga0209437_100106
454 Ga0209437_100127
455 Ga0209258_100035
456 Ga0209258_100256
457 Ga0209258_100428
458 Ga0209646_1001092
459 Ga0209646_1002135
460 Ga0209026_1000051
461 Ga0209026_1000162
462 Ga0209026_1001174
463 Ga0209148_1000002
464 Ga0209148_1000045
465 Ga0209148_1000048
466 Ga0209148_1000412
467 Ga0209759_1000670
468 Ga0209759_1002068
469 Ga0209759_1002548
470 Ga0209129_1003850
471 Ga0209233_1000101
472 Ga0209233_1009273
473 Ga0209455_1000035
474 Ga0209455_1000261
475 Ga0209455_1000312
476 Ga0209256_1004482
477 Ga0207426_1000203
478 Ga0207696_1000795
479 Ga0207696_1012484
480 Ga0207655_1001617
481 Ga0207655_1001838
482 Ga0207655_1005434
483 Ga0207655_1007829
484 Ga0207655_1017436
485 Ga0207655_1024803
486 Ga0207655_1029873
487 Ga0207713_1000058
488 Ga0207713_1000060
489 Ga0207713_1000485
490 Ga0207713_1001516
491 Ga0207710_10000057
492 Ga0207710_10002576
493 Ga0207647_10016730
494 Ga0207647_10030617
495 Ga0207705_10008184
496 Ga0207684_10090651
497 Ga0207707_10004987
498 Ga0207707_10016960
499 Ga0207695_10047595
500 Ga0207671_10000167
501 Ga0207693_10106976
502 Ga0207681_10022664
503 Ga0207694_10059680
504 Ga0207700_10189470
505 Ga0207690_10001237
506 Ga0207690_10002935
507 Ga0207690_10010567
508 Ga0207690_10032437
509 Ga0207706_10073169
510 Ga0207709_10000010
511 Ga0207709_10000057
512 Ga0207670_10001797
513 Ga0207651_10030284
514 Ga0207639_10051338
515 Ga0207678_10008509
516 Ga0209371_1000074
517 Ga0209371_1002534
518 Ga0209371_1003066
519 Ga0307515_10004057
520 Ga0268256_1000067
521 Ga0268256_1002752
522 Ga0307516_10031471
523 Ga0307414_10176834
524 Ga0373949_0001118
525 Ga0373927_0125838
526 Ga0373947_0115163
527 Ga0373925_0028208
528 Ga0395898_0000078
529 Ga0395901_0003377
530 Ga0436365_0912825
531 Ga0439438_000005
532 Ga0439447_003337
533 Ga0439466_0012264
534 Ga0439432_005162
535 Ga0439463_000246
536 Ga0466988_0069151
537 Ga0466965_0017674
538 Ga0466966_0009275
539 Ga0466961_0000259
540 Ga0466961_0002840
541 Ga0466961_0008697
542 Ga0466963_0044815
543 Ga0466968_0016498
544 Ga0466960_0010162
545 Ga0466959_0028086
546 Ga0466958_0013034
547 Ga0466958_0033711
548 Ga0495627_006888
549 Ga0495591_000323
550 Ga0495591_003943
551 Ga0495638_0000007
552 Ga0495638_0001225
553 Ga0495650_0000150
554 Ga0495650_0003078
555 Ga0495605_0000006
556 Ga0495605_0001744
557 Ga0495605_0003862
558 Ga0495584_0002358
559 Ga0495585_0000387
560 Ga0495585_0003921
561 Ga0495596_0001294
562 Ga0495607_0000098
563 Ga0495607_0000210
564 Ga0495607_0002076
565 Ga0495607_0009208
566 Ga0495607_0011178
567 Ga0495607_0013606
568 Ga0495607_0022931
569 Ga0495607_0073148
570 Ga0495607_0088039
571 Ga0495583_0000798
572 Ga0495583_0000984
573 Ga0495583_0001142
574 Ga0495583_0001347
575 Ga0495583_0008105
576 Ga0495606_0000098
577 Ga0495606_0002097
578 Ga0495606_0002307
579 Ga0495606_0068985
580 Ga0495610_0003306
581 Ga0495610_0028224
582 Ga0495616_0059922
583 Ga0495620_0000079
584 Ga0495620_0000916
585 Ga0495620_0000955
586 Ga0495631_0000087
587 Ga0495631_0000396
588 Ga0495631_0008088
589 Ga0495632_0000425
590 Ga0495632_0000562
591 Ga0495632_0007269
592 Ga0495632_0007831
593 Ga0495637_0000181
594 Ga0495637_0000465
595 Ga0495637_0017499
596 Ga0495637_0038610
597 Ga0495644_0000783
598 Ga0495648_0010056
599 Ga0495648_0038421
600 Ga0495663_0001656
601 Ga0495654_0056632
602 Ga0495609_0000034
603 Ga0495609_0000035
604 Ga0495609_0004837
605 Ga0495622_0006766
606 Ga0495622_0015022
607 Ga0495668_0019888
608 Ga0495611_0000600
609 Ga0495625_0000004
610 Ga0495625_0034540
611 Ga0495661_0000041
612 Ga0495661_0000443
613 Ga0495661_0000489
614 Ga0495661_0041673
615 Ga0495671_0005396
616 Ga0495671_0043966
617 Ga0495660_0013777
618 Ga0495660_0015763
619 Ga0495676_0000023
620 Ga0495683_0075922
621 Ga0495679_000256
622 Ga0495673_0000001
623 Ga0495673_0000099
624 Ga0495673_0000205
625 Ga0495673_0000850
626 Ga0495673_0008780
627 Ga0495673_0016774
628 Ga0495681_0002274
629 Ga0495686_0000019
630 Ga0495686_0000441
631 Ga0495686_0076586
632 Ga0495626_0000213
633 Ga0496101_0005909
634 Ga0496102_0173534
635 Ga0496106_0010792
636 Ga0496114_0206481
637 Ga0496115_0000111
638 Ga0496116_0002120
639 Ga0496117_0039497
640 Ga0496118_0005548
641 Ga0496118_0006872
642 Ga0496118_0062703
643 Ga0496121_0000350
644 Ga0496121_0000869
645 Ga0496121_0001304
646 Ga0496121_0013817
647 Ga0496121_0079354
648 Ga0496122_0003357
649 Ga0496122_0011943
650 Ga0496122_0044148
651 Ga0496122_0117280
652 Ga0496123_0000379
653 Ga0496123_0002074
654 Ga0496123_0006005
655 Ga0496123_0050240
656 Ga0496124_0000031
657 Ga0496124_0004969
658 Ga0496124_0008037
659 Ga0496125_0015497
660 Ga0496126_0015363
661 Ga0496126_0055972
662 Ga0496126_0090885
663 Ga0496126_0101690
664 Ga0496126_0224795
665 Ga0496126_0302378
666 Ga0495678_000120
667 Ga0495682_0002319
668 Ga0495682_0014714
669 Ga0501032_0159654
670 Ga0501033_0029712
671 Ga0501034_0074663
672 Ga0501036_0061881
673 Ga0501038_0146761
674 Ga0501043_0082920
675 Ga0501047_0137165
676 Ga0501047_0284483
677 Ga0501048_0068649
678 Ga0501219_000753
679 Ga0501225_0041726
680 Ga0501035_0149770
681 Ga0501044_0333686
682 Ga0501284_00033
683 Ga0500556_0017194
684 Ga0500642_0003416
685 Ga0500645_001257
686 Ga0500645_008565
687 2552746534
688 2587749251
689 2588446637
690 2590612076
691 2595452571
692 2599501953
693 2599932987
694 2599973137
695 2600043042
696 2600066328
697 2601628003
698 2640733173
699 2671587046
700 2678229879
701 2721027818
702 2735836605
703 2738688659
704 2739265029
705 2739730651
706 2740057798
707 2774391284
708 2774439419
709 2813728884
710 2842916194
711 2884340241
712 2884415107
713 2900638983
714 2904463723
715 2911141792
716 2919085677
717 2919185491
718 2928964284
719 2941473576
720 2984575140
721 2984608593
722 3000377257
723 3007876549
724 8033235289

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

90

401

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3o7q-assembly1.cif.gz_A crystal structure of a major facilitator superfamily (mfs) transporter, fucp, in the outward conformation 0.8194 8 373
8jt9-assembly1.cif.gz_A human vmat2 complex with ketanserin 0.8081 14 375
3o7p-assembly1.cif.gz_A crystal structure of the e.coli fucose:proton symporter, fucp (n162a) 0.7934 14 373
6g9x-assembly2.cif.gz_B crystal structure of a mfs transporter at 2.54 angstroem resolution 0.7912 13 373
6g9x-assembly1.cif.gz_A crystal structure of a mfs transporter at 2.54 angstroem resolution 0.786 7 373
ID Description Score Start End Superfamily
af_P75810_211_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9308 199 373 1.20.1250.20
af_Q2FVL1_1_184_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9027 225 373 1.20.1250.20
af_Q59X41_293_496_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8957 197 371 1.20.1250.20
af_P9WJW9_9_219_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8919 205 375 1.20.1250.20
af_A0A1D8PLV7_78_331_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8913 206 374 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A3N7HPS9-F1-model_v4 MFS transporter 0.9912 198 373 GO:0016020
AF-A0A4Q3N266-F1-model_v4 MFS transporter 0.9846 205 373 GO:0016020
AF-F4MY50-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9843 212 375 GO:0016020
AF-A0A4U9UH59-F1-model_v4 Inner membrane protein ybjJ 0.9807 204 381 GO:0016020
AF-A0A2I0SAR7-F1-model_v4 MFS transporter 0.9779 203 373 GO:0016020

Map